>RER1A_ARATH (O48670) RER1A protein (AtRER1A)|
          Length = 191

 Score =  122 bits (307), Expect = 5e-28
 Identities = 51/59 (86%), Positives = 58/59 (98%)
 Frame = -2

Query: 558 FKFWYAITKAFCVAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMKRQILHMVKYKYVPF 382
           FKFWY++TKAFC+AF+MTFFSVFDVPVFWPILLCYWIVLFVLTM+RQI HM+KYKY+PF
Sbjct: 115 FKFWYSMTKAFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPF 173

>RER1B_ARATH (O48671) RER1B protein (AtRER1B)|
          Length = 195

 Score =  120 bits (301), Expect = 3e-27
 Identities = 49/59 (83%), Positives = 58/59 (98%)
 Frame = -2

Query: 558 FKFWYAITKAFCVAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMKRQILHMVKYKYVPF 382
           FKFWY++TKAFC+AF+MTFFSVFDVPVFWPILLCYW+VLFVLTM+RQI HM+K+KY+PF
Sbjct: 114 FKFWYSMTKAFCIAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKHKYIPF 172

>RER1C_ARATH (Q9ZWI7) RER1C protein (AtRER1C)|
          Length = 212

 Score =  100 bits (249), Expect = 3e-21
 Identities = 41/59 (69%), Positives = 51/59 (86%)
 Frame = -2

Query: 558 FKFWYAITKAFCVAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMKRQILHMVKYKYVPF 382
           FKFW +I +AF + F+MTFF VFDVPVFWPILL YW++LF LTM++QI HM+KY+YVPF
Sbjct: 136 FKFWLSIIRAFIIGFMMTFFEVFDVPVFWPILLFYWVMLFFLTMRKQIQHMIKYRYVPF 194

>RER1_HUMAN (O15258) RER1 protein|
          Length = 196

 Score = 92.4 bits (228), Expect = 8e-19
 Identities = 39/59 (66%), Positives = 48/59 (81%)
 Frame = -2

Query: 558 FKFWYAITKAFCVAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMKRQILHMVKYKYVPF 382
           FKFW+A TK   VA V TFF  F+VPVFWPIL+ Y+I+LF +TMKRQI HM+KY+Y+PF
Sbjct: 119 FKFWHAATKGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPF 177

>RER1_MOUSE (Q9CQU3) RER1 protein|
          Length = 196

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 38/59 (64%), Positives = 48/59 (81%)
 Frame = -2

Query: 558 FKFWYAITKAFCVAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMKRQILHMVKYKYVPF 382
           FKFW+A TK   VA + TFF  F+VPVFWPIL+ Y+I+LF +TMKRQI HM+KY+Y+PF
Sbjct: 119 FKFWHAATKGILVAMICTFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPF 177

>YAF8_CAEEL (P52879) Hypothetical protein F46C5.8 in chromosome II|
          Length = 191

 Score = 87.0 bits (214), Expect = 3e-17
 Identities = 35/59 (59%), Positives = 46/59 (77%)
 Frame = -2

Query: 558 FKFWYAITKAFCVAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMKRQILHMVKYKYVPF 382
           FKFW++  KA  +A   TFF  FDVPVFWPIL+ Y+ +L  LT+KRQI+HM+KY+Y+PF
Sbjct: 114 FKFWHSFMKATLIAITCTFFEFFDVPVFWPILVMYFFILTFLTLKRQIMHMIKYRYIPF 172

>RER1_YEAST (P25560) Protein RER1 (Retention of ER proteins 1)|
          Length = 188

 Score = 86.3 bits (212), Expect = 5e-17
 Identities = 34/58 (58%), Positives = 48/58 (82%)
 Frame = -2

Query: 558 FKFWYAITKAFCVAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMKRQILHMVKYKYVP 385
           FKFWY   +A  ++ +++ FS+FD+PVFWPILL Y+I+LF LTM+RQI HM+KY+Y+P
Sbjct: 118 FKFWYNSIRATVISLLLSLFSIFDIPVFWPILLMYFILLFFLTMRRQIQHMIKYRYIP 175

>RER1_SACPS (P79003) Protein RER1 (Retention of ER proteins 1)|
          Length = 188

 Score = 86.3 bits (212), Expect = 5e-17
 Identities = 34/58 (58%), Positives = 48/58 (82%)
 Frame = -2

Query: 558 FKFWYAITKAFCVAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMKRQILHMVKYKYVP 385
           FKFWY   +A  ++ V++ FS+FD+PVFWPILL Y+++LF LTM+RQI HM+KY+Y+P
Sbjct: 118 FKFWYNSIRATVISLVLSLFSIFDIPVFWPILLMYFVLLFFLTMRRQIQHMMKYRYIP 175

>RER1_SCHPO (Q10358) Protein rer1 (Retention of ER proteins 1)|
          Length = 184

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 34/59 (57%), Positives = 44/59 (74%)
 Frame = -2

Query: 558 FKFWYAITKAFCVAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMKRQILHMVKYKYVPF 382
           FKFWY+  +A   A V +FF +FDVPVFWPIL+ Y++VL     +RQI HM+KY+YVPF
Sbjct: 116 FKFWYSSMRATLFALVASFFRIFDVPVFWPILVVYYLVLSFFCFRRQIQHMLKYRYVPF 174


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,986,571
Number of Sequences: 219361
Number of extensions: 1570802
Number of successful extensions: 4023
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4023
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4528412720
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)