ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags31f07 |
|---|---|
| Clone Library Name | barley_pub |
>SINA5_ARATH (Q8S3N1) Ubiquitin ligase SINAT5 (EC 6.3.2.-) (Seven in absentia| homolog 5) Length = 309 Score = 181 bits (459), Expect = 1e-45 Identities = 84/98 (85%), Positives = 92/98 (93%) Frame = -3 Query: 547 VYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNM 368 VYMAFLRFMGDE+DARNY+YSLEVG +GRK WEGTPRS+RDSHRKVRDSHDGLIIQRNM Sbjct: 211 VYMAFLRFMGDEDDARNYTYSLEVGGSGRKQTWEGTPRSVRDSHRKVRDSHDGLIIQRNM 270 Query: 367 ALFFSGGERKELKLRVTGRIWKEQQNPDSGACIPNLFS 254 ALFFSGG++KELKLRVTGRIWKEQQNPDSG CI ++ S Sbjct: 271 ALFFSGGDKKELKLRVTGRIWKEQQNPDSGVCITSMCS 308
>SINA4_ARATH (Q9STN8) Ubiquitin ligase SINAT4 (EC 6.3.2.-) (Seven in absentia| homolog 4) Length = 327 Score = 176 bits (446), Expect = 4e-44 Identities = 84/98 (85%), Positives = 91/98 (92%) Frame = -3 Query: 547 VYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNM 368 VYMAFLRFMGDE DAR+YSYSLEVG +GRK+ WEGTPRSIRDSHRKVRDS+DGLIIQRNM Sbjct: 229 VYMAFLRFMGDEEDARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNM 288 Query: 367 ALFFSGGERKELKLRVTGRIWKEQQNPDSGACIPNLFS 254 ALFFSGG+RKELKLRVTG+IWKEQ +PDSG IPNL S Sbjct: 289 ALFFSGGDRKELKLRVTGKIWKEQHSPDSGLSIPNLSS 326
>SINA3_ARATH (Q84JL3) Ubiquitin ligase SINAT3 (EC 6.3.2.-) (Seven in absentia| homolog 3) Length = 326 Score = 174 bits (440), Expect = 2e-43 Identities = 84/98 (85%), Positives = 89/98 (90%), Gaps = 2/98 (2%) Frame = -3 Query: 547 VYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNM 368 VYMAFLRFMGDE +ARNY+YSLEVG GRK+IWEGTPRS+RDSHRKVRDSHDGLIIQRNM Sbjct: 228 VYMAFLRFMGDETEARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNM 287 Query: 367 ALFFSGGERKELKLRVTGRIWKEQQ--NPDSGACIPNL 260 ALFFSGG+RKELKLRVTGRIWKEQQ GACIPNL Sbjct: 288 ALFFSGGDRKELKLRVTGRIWKEQQQSGEGGGACIPNL 325
>SINA2_ARATH (Q9M2P4) Ubiquitin ligase SINAT2 (EC 6.3.2.-) (Seven in absentia| homolog 2) Length = 308 Score = 148 bits (373), Expect = 1e-35 Identities = 68/84 (80%), Positives = 79/84 (94%) Frame = -3 Query: 547 VYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNM 368 VYMAFLRFMGDEN+A+ +SYSLEVGA+GRK+ W+G PRSIRDSHRKVRDS DGLII RN+ Sbjct: 225 VYMAFLRFMGDENEAKKFSYSLEVGAHGRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNL 284 Query: 367 ALFFSGGERKELKLRVTGRIWKEQ 296 AL+FSGG+R+ELKLRVTGRIWKE+ Sbjct: 285 ALYFSGGDRQELKLRVTGRIWKEE 308
>SINA1_ARATH (P93748) Putative ubiquitin ligase SINAT1 (EC 6.3.2.-) (Seven in| absentia homolog 1) Length = 305 Score = 142 bits (358), Expect = 6e-34 Identities = 65/84 (77%), Positives = 77/84 (91%) Frame = -3 Query: 547 VYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNM 368 VYMAFLRFMGDEN+A+ +SYSLEVGA+ RK+ W+G PRSIRDSHRKVRDS DGLII RN+ Sbjct: 222 VYMAFLRFMGDENEAKKFSYSLEVGAHSRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNL 281 Query: 367 ALFFSGGERKELKLRVTGRIWKEQ 296 AL+FSG +++ELKLRVTGRIWKE+ Sbjct: 282 ALYFSGSDKEELKLRVTGRIWKEE 305
>SIAH2_XENLA (Q9I8X5) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia| homolog 2) (Xsiah-2) Length = 313 Score = 47.0 bits (110), Expect = 4e-05 Identities = 22/64 (34%), Positives = 33/64 (51%) Frame = -3 Query: 544 YMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMA 365 + A + +G A NY+Y LE+ N R++ WE TPRSI D + D L+ +A Sbjct: 234 FFAIVLLIGTRKQAENYAYRLELNGNRRRLTWEATPRSIHDGVAAAIMNSDCLVFDTAIA 293 Query: 364 LFFS 353 F+ Sbjct: 294 HLFA 297
>SIAH2_BRARE (Q7SYL3) Ubiquitin ligase Siah2 (EC 6.3.2.-) (Seven in absentia| homolog 2-like) (Siah-2) Length = 331 Score = 46.6 bits (109), Expect = 5e-05 Identities = 21/64 (32%), Positives = 34/64 (53%) Frame = -3 Query: 544 YMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMA 365 + A + +G A N++Y LE+ N R++ WE TPRSI D + D L+ ++A Sbjct: 254 FFAIVLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAIMNSDCLVFDTSIA 313 Query: 364 LFFS 353 F+ Sbjct: 314 HLFA 317
>SIA1_CAEEL (Q965X6) Ubiquitin ligase sia-1 (EC 6.3.2.-) (Seven in absentia| homolog 1) Length = 339 Score = 46.6 bits (109), Expect = 5e-05 Identities = 26/77 (33%), Positives = 40/77 (51%) Frame = -3 Query: 547 VYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNM 368 ++ A ++ +G + +A N+ Y LE+ A+ R+M WE TPRSI + D L N Sbjct: 256 MFYAVVQLIGSKKEADNFVYRLELSASRRRMSWEATPRSIHEGVVVAIQQSDCLAFDSNA 315 Query: 367 ALFFSGGERKELKLRVT 317 A F+ E L + VT Sbjct: 316 AQLFA--ENGNLGINVT 330
>SIAH1_RAT (Q920M9) Ubiquitin ligase SIAH1 (EC 6.3.2.-) (Seven in absentia| homolog 1) (Siah-1) (Siah-1a) Length = 282 Score = 45.8 bits (107), Expect = 8e-05 Identities = 23/76 (30%), Positives = 40/76 (52%) Frame = -3 Query: 544 YMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMA 365 + A ++ +G A N++Y LE+ + R++ WE TPRSI + + D L+ ++A Sbjct: 205 FFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIA 264 Query: 364 LFFSGGERKELKLRVT 317 F+ E L + VT Sbjct: 265 QLFA--ENGNLGINVT 278
>SIAH1_HUMAN (Q8IUQ4) Ubiquitin ligase SIAH1 (EC 6.3.2.-) (Seven in absentia| homolog 1) (Siah-1) (Siah-1a) Length = 282 Score = 45.8 bits (107), Expect = 8e-05 Identities = 23/76 (30%), Positives = 40/76 (52%) Frame = -3 Query: 544 YMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMA 365 + A ++ +G A N++Y LE+ + R++ WE TPRSI + + D L+ ++A Sbjct: 205 FFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIA 264 Query: 364 LFFSGGERKELKLRVT 317 F+ E L + VT Sbjct: 265 QLFA--ENGNLGINVT 278
>SIAH1_BRARE (Q7ZVG6) Ubiquitin ligase Siah1 (EC 6.3.2.-) (Seven in absentia| homolog 1) (Siah-1) Length = 282 Score = 45.8 bits (107), Expect = 8e-05 Identities = 23/76 (30%), Positives = 40/76 (52%) Frame = -3 Query: 544 YMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMA 365 + A ++ +G A N++Y LE+ + R++ WE TPRSI + + D L+ ++A Sbjct: 205 FFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIA 264 Query: 364 LFFSGGERKELKLRVT 317 F+ E L + VT Sbjct: 265 QLFA--ENGNLGINVT 278
>SIA1B_MOUSE (Q06985) Ubiquitin ligase SIAH1B (EC 6.3.2.-) (Seven in absentia| homolog 1b) (Siah1b) (Siah-1b) Length = 282 Score = 45.8 bits (107), Expect = 8e-05 Identities = 23/76 (30%), Positives = 40/76 (52%) Frame = -3 Query: 544 YMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMA 365 + A ++ +G A N++Y LE+ + R++ WE TPRSI + + D L+ ++A Sbjct: 205 FFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIA 264 Query: 364 LFFSGGERKELKLRVT 317 F+ E L + VT Sbjct: 265 QLFA--ENGNLGINVT 278
>SIA1A_MOUSE (P61092) Ubiquitin ligase SIAH1A (EC 6.3.2.-) (Seven in absentia| homolog 1a) (Siah1a) (Siah-1a) (mSiah-1a) Length = 282 Score = 45.8 bits (107), Expect = 8e-05 Identities = 23/76 (30%), Positives = 40/76 (52%) Frame = -3 Query: 544 YMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMA 365 + A ++ +G A N++Y LE+ + R++ WE TPRSI + + D L+ ++A Sbjct: 205 FFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIA 264 Query: 364 LFFSGGERKELKLRVT 317 F+ E L + VT Sbjct: 265 QLFA--ENGNLGINVT 278
>SIAH2_RAT (Q8R4T2) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia| homolog 2) (Siah-2) Length = 325 Score = 45.4 bits (106), Expect = 1e-04 Identities = 21/64 (32%), Positives = 33/64 (51%) Frame = -3 Query: 544 YMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMA 365 + A + +G A N++Y LE+ N R++ WE TPRSI D + D L+ +A Sbjct: 246 FFAIVLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAIMNSDCLVFDTAIA 305 Query: 364 LFFS 353 F+ Sbjct: 306 HLFA 309
>SIAH2_MOUSE (Q06986) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia| homolog 2) (Siah-2) (mSiah2) Length = 325 Score = 45.4 bits (106), Expect = 1e-04 Identities = 21/64 (32%), Positives = 33/64 (51%) Frame = -3 Query: 544 YMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMA 365 + A + +G A N++Y LE+ N R++ WE TPRSI D + D L+ +A Sbjct: 246 FFAIVLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAIMNSDCLVFDTAIA 305 Query: 364 LFFS 353 F+ Sbjct: 306 HLFA 309
>SIAH2_HUMAN (O43255) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia| homolog 2) (Siah-2) (hSiah2) Length = 324 Score = 45.4 bits (106), Expect = 1e-04 Identities = 21/64 (32%), Positives = 33/64 (51%) Frame = -3 Query: 544 YMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMA 365 + A + +G A N++Y LE+ N R++ WE TPRSI D + D L+ +A Sbjct: 245 FFAIVLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAIMNSDCLVFDTAIA 304 Query: 364 LFFS 353 F+ Sbjct: 305 HLFA 308
>SINA_DROVI (P29304) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia| protein) Length = 314 Score = 45.4 bits (106), Expect = 1e-04 Identities = 19/64 (29%), Positives = 34/64 (53%) Frame = -3 Query: 544 YMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMA 365 + A ++ +G +A N+ Y LE+ N R++ WE PRSI + + D L+ ++A Sbjct: 237 FFAIVQLIGSRKEAENFVYRLELNGNRRRLTWEAMPRSIHEGVASAIHNSDCLVFDTSIA 296 Query: 364 LFFS 353 F+ Sbjct: 297 QLFA 300
>SINA_DROME (P21461) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia| protein) Length = 314 Score = 45.4 bits (106), Expect = 1e-04 Identities = 19/64 (29%), Positives = 34/64 (53%) Frame = -3 Query: 544 YMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMA 365 + A ++ +G +A N+ Y LE+ N R++ WE PRSI + + D L+ ++A Sbjct: 237 FFAIVQLIGSRKEAENFVYRLELNGNRRRLTWEAMPRSIHEGVASAIHNSDCLVFDTSIA 296 Query: 364 LFFS 353 F+ Sbjct: 297 QLFA 300
>SINA_DROER (P61093) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia| protein) Length = 314 Score = 45.4 bits (106), Expect = 1e-04 Identities = 19/64 (29%), Positives = 34/64 (53%) Frame = -3 Query: 544 YMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMA 365 + A ++ +G +A N+ Y LE+ N R++ WE PRSI + + D L+ ++A Sbjct: 237 FFAIVQLIGSRKEAENFVYRLELNGNRRRLTWEAMPRSIHEGVASAIHNSDCLVFDTSIA 296 Query: 364 LFFS 353 F+ Sbjct: 297 QLFA 300
>SINA_DROWI (Q8I147) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia| protein) Length = 331 Score = 45.4 bits (106), Expect = 1e-04 Identities = 19/64 (29%), Positives = 34/64 (53%) Frame = -3 Query: 544 YMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMA 365 + A ++ +G +A N+ Y LE+ N R++ WE PRSI + + D L+ ++A Sbjct: 254 FFAIVQLIGSRKEAENFVYRLELNGNRRRLTWEAMPRSIHEGVASAIHNSDCLVFDTSIA 313 Query: 364 LFFS 353 F+ Sbjct: 314 QLFA 317
>SINA_SCHMA (Q86MW9) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia| homolog) (SmSINA) Length = 371 Score = 42.4 bits (98), Expect = 9e-04 Identities = 23/77 (29%), Positives = 37/77 (48%) Frame = -3 Query: 547 VYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNM 368 ++ A ++ +G A + Y LE+ + R++ WE PRSI D + D L+ N Sbjct: 288 IFFALVQLIGTRKQADQFVYRLELNGHRRRLTWEACPRSIHDGVQSAIAVSDCLVFDSNT 347 Query: 367 ALFFSGGERKELKLRVT 317 A F+ E L + VT Sbjct: 348 AHSFA--ENGNLGINVT 362
>SINAL_DROME (Q8T3Y0) Probable ubiquitin ligase sina-like protein CG13030 (EC| 6.3.2.-) Length = 351 Score = 39.7 bits (91), Expect = 0.006 Identities = 25/85 (29%), Positives = 42/85 (49%) Frame = -3 Query: 544 YMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMA 365 Y R +G DA + Y++ + A R + W+ PRSIR++ ++ D L++ ++ Sbjct: 270 YFTACRMIGSMKDAAEFVYNISLEAYNRTLRWQSKPRSIRENFSSFTNA-DFLVLNKHTV 328 Query: 364 LFFSGGERKELKLRVTGRIWKEQQN 290 FS E L L V R +E+ N Sbjct: 329 ELFS--EDGNLALNVVIRKVEERTN 351
>HTPG_NITOC (Q3JAF6) Chaperone protein htpG (Heat shock protein htpG) (High| temperature protein G) Length = 634 Score = 30.8 bits (68), Expect = 2.6 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%) Frame = -2 Query: 464 QEDDMGGHAPEHPGQSPQSA*--QPRRPHNPAEHGTLLLRRGEERAETAGDWPHL 306 ++ DM G+ ++ Q A QP NPA H + +GEE E GDW HL Sbjct: 549 EQHDMSGYLERLLKEAGQQAPHIQPILELNPA-HPIIARLKGEESEENFGDWAHL 602
>UBP24_HUMAN (Q9UPU5) Ubiquitin carboxyl-terminal hydrolase 24 (EC 3.1.2.15)| (Ubiquitin thioesterase 24) (Ubiquitin-specific-processing protease 24) (Deubiquitinating enzyme 24) Length = 1870 Score = 30.4 bits (67), Expect = 3.4 Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Frame = -2 Query: 464 QEDDMGGHAPEHPGQSPQSA*QPRRPHNP-AEHGTLLLRRGEER 336 + +D+ AP P SPQS+ +P RP+N T L+++GE++ Sbjct: 1312 EAEDLSLSAPSSPEISPQSSPRPHRPNNDRLSILTKLVKKGEKK 1355
>SCAP_CRIGR (P97260) Sterol regulatory element-binding protein| cleavage-activating protein (SREBP cleavage-activating protein) (SCAP) Length = 1276 Score = 30.4 bits (67), Expect = 3.4 Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 5/62 (8%) Frame = -2 Query: 536 IPPLHGRRERCKEL*L*PRGGCQWQED-----DMGGHAPEHPGQSPQSA*QPRRPHNPAE 372 IP RR+ C G + QE+ D G +PE PG+SP +PR P PA Sbjct: 812 IPRPGSRRDSCGG------GAFETQENWERLSDGGKTSPEEPGESPPLRHRPRGPPQPAL 865 Query: 371 HG 366 G Sbjct: 866 FG 867
>RIMB1_MOUSE (Q7TNF8) Peripheral-type benzodiazepine receptor-associated protein 1| (PRAX-1) (Peripheral benzodiazepine receptor-interacting protein) (PBR-IP) (RIM-binding protein 1) (RIM-BP1) Length = 1846 Score = 30.0 bits (66), Expect = 4.5 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 7/58 (12%) Frame = -2 Query: 452 MGGHAPEHPGQSPQSA*QPRRPHNPAEHGTLLLRRGEERAET-------AGDWPHLEG 300 +GG+ G SP+ +RP +P EH + LL G +A G P +EG Sbjct: 1391 VGGNGRRRGGGSPEKLPNRKRPQDPREHCSRLLGNGGPQASARPVPPRERGSLPVIEG 1448
>SM41_HEMPU (Q26264) 41 kDa spicule matrix protein precursor (HSM41) (HPSMC)| Length = 407 Score = 29.6 bits (65), Expect = 5.9 Identities = 13/33 (39%), Positives = 16/33 (48%) Frame = -2 Query: 476 GCQWQEDDMGGHAPEHPGQSPQSA*QPRRPHNP 378 G Q+ MGG P GQ P + P P+NP Sbjct: 352 GMGGQQPGMGGRQPGMGGQQPNNPNNPNNPNNP 384
>MS84A_DROME (Q01642) Male-specific sperm protein Mst84Da| Length = 63 Score = 29.6 bits (65), Expect = 5.9 Identities = 12/27 (44%), Positives = 12/27 (44%) Frame = +1 Query: 397 GCHALCGDCPGCSGACPPISSSCHWHP 477 GC CG C GC C SS C P Sbjct: 35 GCGPCCGPCGGCGPCCGGTSSFCGCGP 61
>DPOLA_ORYSA (O48653) DNA polymerase alpha catalytic subunit (EC 2.7.7.7)| Length = 1534 Score = 29.3 bits (64), Expect = 7.7 Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 2/24 (8%) Frame = +1 Query: 394 RGCHALCGDCPGCSGA--CPPISS 459 RGC L CP CS CPP+SS Sbjct: 1331 RGCEPLRLSCPSCSTTFDCPPVSS 1354
>CADH1_ARATH (P48523) Cinnamyl-alcohol dehydrogenase (EC 1.1.1.195) (CAD)| Length = 365 Score = 29.3 bits (64), Expect = 7.7 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%) Frame = +1 Query: 427 GCSGACPPISSSCHWH-PPRGYSYNSLHRSRRP*SGG 534 GC G+C P SS + R +SYN ++ +P GG Sbjct: 99 GCCGSCKPCSSELEQYCNKRIWSYNDVYTDGKPTQGG 135
>BGS3_SCHPO (Q9P377) 1,3-beta-glucan synthase component bgs3 (EC 2.4.1.34)| (1,3-beta-D-glucan-UDP glucosyltransferase) Length = 1826 Score = 28.9 bits (63), Expect = 10.0 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -1 Query: 216 VYIEEM*LPICFSLFTVCVCAFSLFQP 136 V E+ LP CF+ FT+C F QP Sbjct: 1530 VIFTEVFLPACFAFFTICAYTFMNSQP 1556 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 79,726,192 Number of Sequences: 219361 Number of extensions: 1678495 Number of successful extensions: 5299 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 4971 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5264 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4430660157 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
