| Clone Name | rbags31f01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_483366.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1878 Score = 42.1 bits (21), Expect = 0.87 Identities = 24/25 (96%) Strand = Plus / Minus Query: 56 aaatacatccgttactctgttaagg 80 ||||||||| ||||||||||||||| Sbjct: 1812 aaatacatctgttactctgttaagg 1788
>emb|CR382340.7| Zebrafish DNA sequence from clone DKEY-151G10 in linkage group 23, complete sequence Length = 158509 Score = 42.1 bits (21), Expect = 0.87 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 aacagtacagtacagtaatga 137 ||||||||||||||||||||| Sbjct: 72353 aacagtacagtacagtaatga 72373
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 0.87 Identities = 24/25 (96%) Strand = Plus / Plus Query: 56 aaatacatccgttactctgttaagg 80 ||||||||| ||||||||||||||| Sbjct: 25851877 aaatacatctgttactctgttaagg 25851901
>dbj|AP005509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1003_A09 Length = 150755 Score = 42.1 bits (21), Expect = 0.87 Identities = 24/25 (96%) Strand = Plus / Plus Query: 56 aaatacatccgttactctgttaagg 80 ||||||||| ||||||||||||||| Sbjct: 37664 aaatacatctgttactctgttaagg 37688
>dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0689E12 Length = 147516 Score = 42.1 bits (21), Expect = 0.87 Identities = 24/25 (96%) Strand = Plus / Plus Query: 56 aaatacatccgttactctgttaagg 80 ||||||||| ||||||||||||||| Sbjct: 124088 aaatacatctgttactctgttaagg 124112
>dbj|AK069912.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037G11, full insert sequence Length = 1877 Score = 42.1 bits (21), Expect = 0.87 Identities = 24/25 (96%) Strand = Plus / Minus Query: 56 aaatacatccgttactctgttaagg 80 ||||||||| ||||||||||||||| Sbjct: 1811 aaatacatctgttactctgttaagg 1787
>emb|CR735113.6| Zebrafish DNA sequence from clone CH211-232J17 in linkage group 19, complete sequence Length = 55980 Score = 42.1 bits (21), Expect = 0.87 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 tgtcaacagtacagtacagta 133 ||||||||||||||||||||| Sbjct: 54769 tgtcaacagtacagtacagta 54749
>gb|AC108034.2| Homo sapiens BAC clone RP11-137J16 from 4, complete sequence Length = 164396 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 acaagcaaatgaaaagctct 186 |||||||||||||||||||| Sbjct: 11716 acaagcaaatgaaaagctct 11697 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,891,114 Number of Sequences: 3902068 Number of extensions: 1891114 Number of successful extensions: 34920 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 34900 Number of HSP's gapped (non-prelim): 20 length of query: 264 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 242 effective length of database: 17,147,199,772 effective search space: 4149622344824 effective search space used: 4149622344824 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)