ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags31e24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK058904.1| Oryza sativa (japonica cultivar-group) cDNA clon... 224 3e-55
2ref|NM_190044.1| Oryza sativa (japonica cultivar-group), predic... 222 1e-54
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 194 2e-46
4dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic D... 194 2e-46
5dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic D... 194 2e-46
6emb|AL732559.9| Mouse DNA sequence from clone RP23-9A5 on chromo... 44 0.53
7gb|AC165351.2| Mus musculus BAC clone RP23-197K16 from chromosom... 42 2.1
8ref|XM_452388.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C04279g ... 42 2.1
9gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 42 2.1
10gb|AC124499.3| Mus musculus BAC clone RP24-68G23 from chromosome... 42 2.1
11gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 42 2.1
12ref|XM_789881.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 2.1
13emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 42 2.1
14gb|AC113170.2| Homo sapiens chromosome 3 clone RP11-604J9, compl... 42 2.1
15gb|AC132515.6| Homo sapiens 3 BAC RP11-692F18 (Roswell Park Canc... 42 2.1
16dbj|BS000220.1| Pan troglodytes chromosome 22 clone:PTB-057K02, ... 42 2.1
17emb|BX004992.13| Zebrafish DNA sequence from clone CH211-120E13 ... 42 2.1
18emb|CR354430.16| Zebrafish DNA sequence from clone CH211-218P2 i... 42 2.1
19dbj|AP001700.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 42 2.1
20dbj|AP001608.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 42 2.1
21gb|AC146382.4| Pan troglodytes BAC clone RP43-112E23 from 7, com... 40 8.3
22gb|AC146370.3| Pan troglodytes BAC clone RP43-58J3 from 7, compl... 40 8.3
23emb|AL356010.9| Human DNA sequence from clone RP11-136B18 on chr... 40 8.3
24emb|AL135932.7| Human DNA sequence from clone RP4-535H23 on chro... 40 8.3
25gb|AC008534.7| Homo sapiens chromosome 5 clone CTC-484P3, comple... 40 8.3
26gb|AC124854.2| Homo sapiens chromosome 5 clone RP11-133F8, compl... 40 8.3
27emb|CR927553.8| Zebrafish DNA sequence from clone DKEY-206P8 in ... 40 8.3
28dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102 40 8.3
29emb|BX511223.6| Zebrafish DNA sequence from clone DKEYP-96B6 in ... 40 8.3
30gb|AC012312.9| Homo sapiens chromosome 5 clone CTC-558O19, compl... 40 8.3
31gb|AC026780.5| Homo sapiens chromosome 5 clone CTC-529L17, compl... 40 8.3
32dbj|AK086347.1| Mus musculus 15 days embryo head cDNA, RIKEN ful... 40 8.3
33gb|AC096667.1| Homo sapiens BAC clone RP11-363K21 from 2, comple... 40 8.3
34emb|AL954666.10| Zebrafish DNA sequence from clone CH211-81I19 i... 40 8.3
35gb|AC004095.1|AC004095 Human Cosmid g1248a143 from 7q31.3, compl... 40 8.3
36emb|AL845268.2| Mouse DNA sequence from clone RP23-69A6 on chrom... 40 8.3
37emb|AL669848.12| Mouse DNA sequence from clone RP23-209F17 on ch... 40 8.3

>dbj|AK058904.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-C06, full
           insert sequence
          Length = 721

 Score =  224 bits (113), Expect = 3e-55
 Identities = 315/381 (82%), Gaps = 1/381 (0%)
 Strand = Plus / Minus

                                                                       
Query: 226 acatcaaacatcaaccattaggctgaaggaatccgccatcgcaaagaactcttcctgaac 285
           |||||| |||||| ||| ||||||||| ||||| ||||| |||| |||||||| | ||||
Sbjct: 548 acatcatacatcagccactaggctgaatgaatctgccattgcaaggaactctttccgaac 489

                                                                       
Query: 286 cgacctccatgccgactccggtgcctgggcattcaaggtgtaaagtttgccgtctctcgc 345
           || | |||| ||||||||||| ||||| || |||| |||||| ||||| || ||  ||||
Sbjct: 488 cgccttccacgccgactccggagcctgagcgttcagggtgtatagtttcccatccttcgc 429

                                                                       
Query: 346 gcagcacaccgccacattgtgccgtcggaaggaagggctctcgactcggaactccagctt 405
           ||||||||| || |||||| | ||||| ||||||||||| || ||||||||||| |||||
Sbjct: 428 gcagcacactgcgacattgcgtcgtcgaaaggaagggctttcaactcggaactctagctt 369

                                                                       
Query: 406 gtagtatttcacattgttcacggtgtcttctctcaacgcggcaccgatcagagtggcgct 465
           ||||||||||||||||||| | |  ||||||||||  || ||| | |  ||||||||| |
Sbjct: 368 gtagtatttcacattgttcgctggatcttctctcagggcagcatcaagaagagtggcgtt 309

                                                                       
Query: 466 gatatccgggttccgctttgtccttgcgatcctcctcagcaccacttccccgacatcttt 525
            ||||| | |  |||||||||| |||||||||| || || ||||| ||||| ||||||||
Sbjct: 308 tatatctgcgccccgctttgtctttgcgatccttctgagaaccacctccccaacatcttt 249

                                                                       
Query: 526 aggaccgccaaaagactcaatcgagaagtcttgtgggacggtcgacacaatgacgctgac 585
           ||| || ||||||| ||| |||||||| ||||||||||| |  || || ||||| |||||
Sbjct: 248 agggccaccaaaagcctcgatcgagaa-tcttgtgggacaggtgaaacgatgacactgac 190

                                
Query: 586 gttgagctccccgttggatcc 606
            |||||||||||  |||||||
Sbjct: 189 attgagctccccactggatcc 169



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>ref|NM_190044.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 945

 Score =  222 bits (112), Expect = 1e-54
 Identities = 307/372 (82%)
 Strand = Plus / Minus

                                                                       
Query: 235 atcaaccattaggctgaaggaatccgccatcgcaaagaactcttcctgaaccgacctcca 294
           |||| ||| ||||||||| ||||| ||||| |||| |||||||| | |||||| | ||||
Sbjct: 816 atcagccactaggctgaatgaatctgccattgcaaggaactctttccgaaccgccttcca 757

                                                                       
Query: 295 tgccgactccggtgcctgggcattcaaggtgtaaagtttgccgtctctcgcgcagcacac 354
            ||||||||||| ||||| || |||| |||||| ||||| || ||  |||||||||||||
Sbjct: 756 cgccgactccggagcctgagcgttcagggtgtatagtttcccatccttcgcgcagcacac 697

                                                                       
Query: 355 cgccacattgtgccgtcggaaggaagggctctcgactcggaactccagcttgtagtattt 414
            || |||||| | ||||| ||||||||||| || ||||||||||| ||||||||||||||
Sbjct: 696 tgcgacattgcgtcgtcgaaaggaagggctttcaactcggaactctagcttgtagtattt 637

                                                                       
Query: 415 cacattgttcacggtgtcttctctcaacgcggcaccgatcagagtggcgctgatatccgg 474
           |||||||||| | |  ||||||||||  || ||| | |  ||||||||| | ||||| | 
Sbjct: 636 cacattgttcgctggatcttctctcagggcagcatcaagaagagtggcgtttatatctgc 577

                                                                       
Query: 475 gttccgctttgtccttgcgatcctcctcagcaccacttccccgacatctttaggaccgcc 534
           |  |||||||||| |||||||||| || || ||||| ||||| ||||||||||| || ||
Sbjct: 576 gccccgctttgtctttgcgatccttctgagaaccacctccccaacatctttagggccacc 517

                                                                       
Query: 535 aaaagactcaatcgagaagtcttgtgggacggtcgacacaatgacgctgacgttgagctc 594
           ||||| ||| |||||||| ||||||||||| |  || || ||||| ||||| ||||||||
Sbjct: 516 aaaagcctcgatcgagaaatcttgtgggacaggtgaaacgatgacactgacattgagctc 457

                       
Query: 595 cccgttggatcc 606
           |||  |||||||
Sbjct: 456 cccactggatcc 445



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  194 bits (98), Expect = 2e-46
 Identities = 260/314 (82%)
 Strand = Plus / Minus

                                                                            
Query: 226      acatcaaacatcaaccattaggctgaaggaatccgccatcgcaaagaactcttcctgaac 285
                |||||| |||||| ||| ||||||||| ||||| ||||| |||| |||||||| | ||||
Sbjct: 40989494 acatcatacatcagccactaggctgaatgaatctgccattgcaaggaactctttccgaac 40989435

                                                                            
Query: 286      cgacctccatgccgactccggtgcctgggcattcaaggtgtaaagtttgccgtctctcgc 345
                || | |||| ||||||||||| ||||| || |||| |||||| ||||| || ||  ||||
Sbjct: 40989434 cgccttccacgccgactccggagcctgagcgttcagggtgtatagtttcccatccttcgc 40989375

                                                                            
Query: 346      gcagcacaccgccacattgtgccgtcggaaggaagggctctcgactcggaactccagctt 405
                ||||||||| || |||||| | ||||| ||||||||||| || ||||||||||| |||||
Sbjct: 40989374 gcagcacactgcgacattgcgtcgtcgaaaggaagggctttcaactcggaactctagctt 40989315

                                                                            
Query: 406      gtagtatttcacattgttcacggtgtcttctctcaacgcggcaccgatcagagtggcgct 465
                ||||||||||||||||||| | |  ||||||||||  || ||| | |  ||||||||| |
Sbjct: 40989314 gtagtatttcacattgttcgctggatcttctctcagggcagcatcaagaagagtggcgtt 40989255

                                                                            
Query: 466      gatatccgggttccgctttgtccttgcgatcctcctcagcaccacttccccgacatcttt 525
                 ||||| | |  |||||||||| |||||||||| || || ||||| ||||| ||||||||
Sbjct: 40989254 tatatctgcgccccgctttgtctttgcgatccttctgagaaccacctccccaacatcttt 40989195

                              
Query: 526      aggaccgccaaaag 539
                ||| || |||||||
Sbjct: 40989194 agggccaccaaaag 40989181



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                            
Query: 547      cgagaagtcttgtgggacggtcgacacaatgacgctgacgttgagctccccgttggatcc 606
                |||||| ||||||||||| |  || || ||||| ||||| |||||||||||  |||||||
Sbjct: 40988919 cgagaaatcttgtgggacaggtgaaacgatgacactgacattgagctccccactggatcc 40988860



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>dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0492G09
          Length = 142239

 Score =  194 bits (98), Expect = 2e-46
 Identities = 260/314 (82%)
 Strand = Plus / Minus

                                                                         
Query: 226   acatcaaacatcaaccattaggctgaaggaatccgccatcgcaaagaactcttcctgaac 285
             |||||| |||||| ||| ||||||||| ||||| ||||| |||| |||||||| | ||||
Sbjct: 26424 acatcatacatcagccactaggctgaatgaatctgccattgcaaggaactctttccgaac 26365

                                                                         
Query: 286   cgacctccatgccgactccggtgcctgggcattcaaggtgtaaagtttgccgtctctcgc 345
             || | |||| ||||||||||| ||||| || |||| |||||| ||||| || ||  ||||
Sbjct: 26364 cgccttccacgccgactccggagcctgagcgttcagggtgtatagtttcccatccttcgc 26305

                                                                         
Query: 346   gcagcacaccgccacattgtgccgtcggaaggaagggctctcgactcggaactccagctt 405
             ||||||||| || |||||| | ||||| ||||||||||| || ||||||||||| |||||
Sbjct: 26304 gcagcacactgcgacattgcgtcgtcgaaaggaagggctttcaactcggaactctagctt 26245

                                                                         
Query: 406   gtagtatttcacattgttcacggtgtcttctctcaacgcggcaccgatcagagtggcgct 465
             ||||||||||||||||||| | |  ||||||||||  || ||| | |  ||||||||| |
Sbjct: 26244 gtagtatttcacattgttcgctggatcttctctcagggcagcatcaagaagagtggcgtt 26185

                                                                         
Query: 466   gatatccgggttccgctttgtccttgcgatcctcctcagcaccacttccccgacatcttt 525
              ||||| | |  |||||||||| |||||||||| || || ||||| ||||| ||||||||
Sbjct: 26184 tatatctgcgccccgctttgtctttgcgatccttctgagaaccacctccccaacatcttt 26125

                           
Query: 526   aggaccgccaaaag 539
             ||| || |||||||
Sbjct: 26124 agggccaccaaaag 26111



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                         
Query: 547   cgagaagtcttgtgggacggtcgacacaatgacgctgacgttgagctccccgttggatcc 606
             |||||| ||||||||||| |  || || ||||| ||||| |||||||||||  |||||||
Sbjct: 25849 cgagaaatcttgtgggacaggtgaaacgatgacactgacattgagctccccactggatcc 25790



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>dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0423A12
          Length = 178649

 Score =  194 bits (98), Expect = 2e-46
 Identities = 260/314 (82%)
 Strand = Plus / Minus

                                                                          
Query: 226    acatcaaacatcaaccattaggctgaaggaatccgccatcgcaaagaactcttcctgaac 285
              |||||| |||||| ||| ||||||||| ||||| ||||| |||| |||||||| | ||||
Sbjct: 117919 acatcatacatcagccactaggctgaatgaatctgccattgcaaggaactctttccgaac 117860

                                                                          
Query: 286    cgacctccatgccgactccggtgcctgggcattcaaggtgtaaagtttgccgtctctcgc 345
              || | |||| ||||||||||| ||||| || |||| |||||| ||||| || ||  ||||
Sbjct: 117859 cgccttccacgccgactccggagcctgagcgttcagggtgtatagtttcccatccttcgc 117800

                                                                          
Query: 346    gcagcacaccgccacattgtgccgtcggaaggaagggctctcgactcggaactccagctt 405
              ||||||||| || |||||| | ||||| ||||||||||| || ||||||||||| |||||
Sbjct: 117799 gcagcacactgcgacattgcgtcgtcgaaaggaagggctttcaactcggaactctagctt 117740

                                                                          
Query: 406    gtagtatttcacattgttcacggtgtcttctctcaacgcggcaccgatcagagtggcgct 465
              ||||||||||||||||||| | |  ||||||||||  || ||| | |  ||||||||| |
Sbjct: 117739 gtagtatttcacattgttcgctggatcttctctcagggcagcatcaagaagagtggcgtt 117680

                                                                          
Query: 466    gatatccgggttccgctttgtccttgcgatcctcctcagcaccacttccccgacatcttt 525
               ||||| | |  |||||||||| |||||||||| || || ||||| ||||| ||||||||
Sbjct: 117679 tatatctgcgccccgctttgtctttgcgatccttctgagaaccacctccccaacatcttt 117620

                            
Query: 526    aggaccgccaaaag 539
              ||| || |||||||
Sbjct: 117619 agggccaccaaaag 117606



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                          
Query: 547    cgagaagtcttgtgggacggtcgacacaatgacgctgacgttgagctccccgttggatcc 606
              |||||| ||||||||||| |  || || ||||| ||||| |||||||||||  |||||||
Sbjct: 117344 cgagaaatcttgtgggacaggtgaaacgatgacactgacattgagctccccactggatcc 117285



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>emb|AL732559.9| Mouse DNA sequence from clone RP23-9A5 on chromosome 2, complete sequence
          Length = 167364

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 100    aacatttatttatgttacattttact 125
              ||||||||||||| ||||||||||||
Sbjct: 128934 aacatttatttatattacattttact 128909



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>gb|AC165351.2| Mus musculus BAC clone RP23-197K16 from chromosome 12, complete sequence
          Length = 211170

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 101    acatttatttatgttacattt 121
              |||||||||||||||||||||
Sbjct: 107828 acatttatttatgttacattt 107848



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>ref|XM_452388.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C04279g predicted mRNA
          Length = 2655

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 105 ttatttatgttacattttact 125
           |||||||||||||||||||||
Sbjct: 138 ttatttatgttacattttact 158



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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 256     atccgccatcgcaaagaactc 276
               |||||||||||||||||||||
Sbjct: 2852163 atccgccatcgcaaagaactc 2852183



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>gb|AC124499.3| Mus musculus BAC clone RP24-68G23 from chromosome 12, complete sequence
          Length = 209276

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 101   acatttatttatgttacattt 121
             |||||||||||||||||||||
Sbjct: 64303 acatttatttatgttacattt 64283



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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 256     atccgccatcgcaaagaactc 276
               |||||||||||||||||||||
Sbjct: 3580632 atccgccatcgcaaagaactc 3580652



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>ref|XM_789881.1| PREDICTED: Strongylocentrotus purpuratus similar to AF-10 protein
            (LOC590272), mRNA
          Length = 3301

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 483  ttgtccttgcgatcctcctca 503
            |||||||||||||||||||||
Sbjct: 1566 ttgtccttgcgatcctcctca 1546



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>emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome C of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1753957

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 105    ttatttatgttacattttact 125
              |||||||||||||||||||||
Sbjct: 392305 ttatttatgttacattttact 392325



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>gb|AC113170.2| Homo sapiens chromosome 3 clone RP11-604J9, complete sequence
          Length = 182020

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 90    gtgatacagaaacatttattt 110
             |||||||||||||||||||||
Sbjct: 34882 gtgatacagaaacatttattt 34902



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>gb|AC132515.6| Homo sapiens 3 BAC RP11-692F18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 79564

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 90    gtgatacagaaacatttattt 110
             |||||||||||||||||||||
Sbjct: 28543 gtgatacagaaacatttattt 28523



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>dbj|BS000220.1| Pan troglodytes chromosome 22 clone:PTB-057K02, map 22, complete
             sequences
          Length = 150817

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 71    tgatgtcacaaagaacattgt 91
             |||||||||||||||||||||
Sbjct: 93811 tgatgtcacaaagaacattgt 93831



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>emb|BX004992.13| Zebrafish DNA sequence from clone CH211-120E13 in linkage group 16,
              complete sequence
          Length = 195432

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 219    agatcaaacatcaaacatcaa 239
              |||||||||||||||||||||
Sbjct: 165471 agatcaaacatcaaacatcaa 165491



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>emb|CR354430.16| Zebrafish DNA sequence from clone CH211-218P2 in linkage group 25,
             complete sequence
          Length = 197231

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 101   acatttatttatgttacattt 121
             |||||||||||||||||||||
Sbjct: 52486 acatttatttatgttacattt 52466



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>dbj|AP001700.1| Homo sapiens genomic DNA, chromosome 21q, section 44/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 71     tgatgtcacaaagaacattgt 91
              |||||||||||||||||||||
Sbjct: 119439 tgatgtcacaaagaacattgt 119459



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>dbj|AP001608.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1919E1, APP-D21S292
             region, complete sequence
          Length = 158485

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 71    tgatgtcacaaagaacattgt 91
             |||||||||||||||||||||
Sbjct: 25196 tgatgtcacaaagaacattgt 25216



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>gb|AC146382.4| Pan troglodytes BAC clone RP43-112E23 from 7, complete sequence
          Length = 181957

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   tttatttatgttacatttta 123
             ||||||||||||||||||||
Sbjct: 20493 tttatttatgttacatttta 20512



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>gb|AC146370.3| Pan troglodytes BAC clone RP43-58J3 from 7, complete sequence
          Length = 80817

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   tttatttatgttacatttta 123
             ||||||||||||||||||||
Sbjct: 68674 tttatttatgttacatttta 68655



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>emb|AL356010.9| Human DNA sequence from clone RP11-136B18 on chromosome 1 Contains a
             pseudogene similar to part of POM (POM121 homolog, rat)
             and ZP3 fusion (POMZP3), a novel gene and a CpG island,
             complete sequence
          Length = 151182

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   atttatttatgttacatttt 122
             ||||||||||||||||||||
Sbjct: 91086 atttatttatgttacatttt 91067



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>emb|AL135932.7| Human DNA sequence from clone RP4-535H23 on chromosome 11p12-14.1
             Contains STSs, complete sequence
          Length = 143321

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    aaacatttatttatgttaca 118
             ||||||||||||||||||||
Sbjct: 61459 aaacatttatttatgttaca 61478



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>gb|AC008534.7| Homo sapiens chromosome 5 clone CTC-484P3, complete sequence
          Length = 253402

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 100  aacatttatttatgttacat 119
            ||||||||||||||||||||
Sbjct: 1725 aacatttatttatgttacat 1744



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>gb|AC124854.2| Homo sapiens chromosome 5 clone RP11-133F8, complete sequence
          Length = 149205

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 101   acatttatttatgttacattttac 124
             |||||||||||| |||||||||||
Sbjct: 10554 acatttatttattttacattttac 10531



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>emb|CR927553.8| Zebrafish DNA sequence from clone DKEY-206P8 in linkage group 17,
             complete sequence
          Length = 162064

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 100   aacatttatttatgttacat 119
             ||||||||||||||||||||
Sbjct: 12393 aacatttatttatgttacat 12412



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>dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102
          Length = 1779707

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 141     accatgacattcgcaagcga 160
               ||||||||||||||||||||
Sbjct: 1211947 accatgacattcgcaagcga 1211928



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>emb|BX511223.6| Zebrafish DNA sequence from clone DKEYP-96B6 in linkage group 14,
             complete sequence
          Length = 190254

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    aaacatttatttatgttaca 118
             ||||||||||||||||||||
Sbjct: 24174 aaacatttatttatgttaca 24193



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>gb|AC012312.9| Homo sapiens chromosome 5 clone CTC-558O19, complete sequence
          Length = 181226

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 100    aacatttatttatgttacat 119
              ||||||||||||||||||||
Sbjct: 104456 aacatttatttatgttacat 104437



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>gb|AC026780.5| Homo sapiens chromosome 5 clone CTC-529L17, complete sequence
          Length = 170059

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 101    acatttatttatgttacattttac 124
              |||||||||||| |||||||||||
Sbjct: 106220 acatttatttattttacattttac 106197



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>dbj|AK086347.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
           library, clone:D930023D13 product:unclassifiable, full
           insert sequence
          Length = 3338

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 221 atcaaacatcaaacatcaac 240
           ||||||||||||||||||||
Sbjct: 54  atcaaacatcaaacatcaac 35



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>gb|AC096667.1| Homo sapiens BAC clone RP11-363K21 from 2, complete sequence
          Length = 194508

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    attgtgatacagaaacattt 106
             ||||||||||||||||||||
Sbjct: 60320 attgtgatacagaaacattt 60339



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>emb|AL954666.10| Zebrafish DNA sequence from clone CH211-81I19 in linkage group 24,
             complete sequence
          Length = 163872

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    gatgtcacaaagaacattgt 91
             ||||||||||||||||||||
Sbjct: 20829 gatgtcacaaagaacattgt 20810



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>gb|AC004095.1|AC004095 Human Cosmid g1248a143 from 7q31.3, complete sequence
          Length = 38162

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   tttatttatgttacatttta 123
             ||||||||||||||||||||
Sbjct: 21463 tttatttatgttacatttta 21482



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>emb|AL845268.2| Mouse DNA sequence from clone RP23-69A6 on chromosome X, complete
           sequence
          Length = 106589

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 103 atttatttatgttacatttt 122
           ||||||||||||||||||||
Sbjct: 962 atttatttatgttacatttt 981



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>emb|AL669848.12| Mouse DNA sequence from clone RP23-209F17 on chromosome X, complete
              sequence
          Length = 114708

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 103    atttatttatgttacatttt 122
              ||||||||||||||||||||
Sbjct: 113670 atttatttatgttacatttt 113689


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,226,533
Number of Sequences: 3902068
Number of extensions: 4226533
Number of successful extensions: 87249
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87103
Number of HSP's gapped (non-prelim): 140
length of query: 607
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 584
effective length of database: 17,143,297,704
effective search space: 10011685859136
effective search space used: 10011685859136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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