ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags30p16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
2dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
3gb|AY109268.1| Zea mays PCO069225 mRNA sequence 46 0.13
4ref|XM_948808.1| Theileria annulata strain Ankara hypothetical p... 44 0.51
5emb|AL354736.10| Human DNA sequence from clone RP11-205B18 on ch... 44 0.51
6gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome 42 2.0
7gb|AC161812.3| Mus musculus chromosome 15, clone RP23-195I24, co... 42 2.0
8gb|AC130217.4| Mus musculus BAC clone RP23-237P18 from chromosom... 42 2.0
9gb|AC124055.6| Homo sapiens chromosome 11, clone RP4-608B4, comp... 42 2.0
10gb|AC021032.9| Homo sapiens chromosome 10 clone RP11-180I22, com... 42 2.0
11emb|AJ006345.1|HSA6345 Homo sapiens KVLQT1 gene 42 2.0
12gb|AC021424.6| Homo sapiens chromosome 11, clone RP11-38L8, comp... 42 2.0
13gb|AC104834.4| Mus Musculus Strain C57BL6/J Chromosome 15 RP23-2... 42 2.0
14gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 42 2.0
15gb|AC002403.1|AC002403 Human Chromosome 11p15.5 pac pDJ608b4, co... 42 2.0
16gb|U90095.1|U90095 Human Chromosome 11p15.5 pac pDJ74k15, comple... 42 2.0
17gb|AC009391.16| Drosophila melanogaster clone BACR21I23, complet... 40 8.0
18gb|AC137902.10| Mus musculus chromosome 15, clone RP23-372O9, co... 40 8.0
19gb|AC140339.4| Mus musculus BAC clone RP24-64N14 from chromosome... 40 8.0
20gb|AC044807.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 8.0
21gb|AY294226.1| Uncultured bacterium cosmid gbiox603r, complete s... 40 8.0
22gb|AC079276.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 8.0
23gb|AC114423.16| Mus musculus chromosome 6, clone RP23-461C23, co... 40 8.0
24gb|AC127694.3| Mus musculus BAC clone RP23-235J3 from chromosome... 40 8.0
25emb|AL607067.17| Human DNA sequence from clone RP11-201K10 on ch... 40 8.0
26emb|AL645821.1| Human DNA sequence from clone RP3-465G10 on chro... 40 8.0
27emb|AL592166.16| Human DNA sequence from clone RP11-269F19 on ch... 40 8.0
28emb|AL606468.8| Human DNA sequence from clone RP11-15I11 on chro... 40 8.0
29ref|XM_783711.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.0
30emb|AL121900.26|HSBA379J5 Human DNA sequence from clone RP11-379... 40 8.0
31emb|AL118513.17|HSDJ685L9 Human DNA sequence from clone RP4-685L... 40 8.0
32emb|Z94801.1|HS465G10B Human DNA sequence from PAC 465G10 on chr... 40 8.0
33emb|CR352431.1| Gallus gallus finished cDNA, clone ChEST325l16 40 8.0
34dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
35gb|AC008028.3|AC008028 Drosophila melanogaster, chromosome 3R, r... 40 8.0
36gb|AC011308.8| Homo sapiens BAC clone RP11-522N18 from 2, comple... 40 8.0
37gb|AC153613.9| Mus musculus 10 BAC RP23-23C9 (Roswell Park Cance... 40 8.0
38gb|AC153842.9| Mus musculus 6 BAC RP23-348K12 (Roswell Park Canc... 40 8.0
39dbj|AP005577.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
40emb|Z23494.1|HS199ZB12 H. sapiens (D1S421) DNA segment containin... 40 8.0
41emb|BX005407.5| Zebrafish DNA sequence from clone CH211-222C22 i... 40 8.0
42gb|AE003765.3| Drosophila melanogaster chromosome 3R, section 10... 40 8.0
43gb|AE003780.4| Drosophila melanogaster chromosome 3R, section 11... 40 8.0
44gb|U40367.1|HSGPDM16 Human glycerol-3-phosphate dehydrogenase (G... 40 8.0
45emb|CT025633.3| Pan troglodytes chromosome X clone RP43-007L03 m... 40 8.0
46emb|AL845503.5| Mouse DNA sequence from clone RP23-292G16 on chr... 40 8.0
47emb|AL672251.10| Mouse DNA sequence from clone RP23-16O15 on chr... 40 8.0
48emb|AL928689.7| Mouse DNA sequence from clone RP23-35P3 on chrom... 40 8.0 
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 65/70 (92%), Gaps = 1/70 (1%)
 Strand = Plus / Plus

                                                                            
Query: 75       gtagtagtggtcggtcggttgtctatagaggacacaactcgatccaatgc-caccaacta 133
                |||||||||||||||||||||||| ||||||||||||||||||||||  | ||||| |||
Sbjct: 31442508 gtagtagtggtcggtcggttgtctgtagaggacacaactcgatccaaaccacaccagcta 31442567

                          
Query: 134      aatttacata 143
                ||||||||||
Sbjct: 31442568 aatttacata 31442577
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>dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0078N11
          Length = 155168

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 65/70 (92%), Gaps = 1/70 (1%)
 Strand = Plus / Plus

                                                                         
Query: 75    gtagtagtggtcggtcggttgtctatagaggacacaactcgatccaatgc-caccaacta 133
             |||||||||||||||||||||||| ||||||||||||||||||||||  | ||||| |||
Sbjct: 77905 gtagtagtggtcggtcggttgtctgtagaggacacaactcgatccaaaccacaccagcta 77964

                       
Query: 134   aatttacata 143
             ||||||||||
Sbjct: 77965 aatttacata 77974
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>gb|AY109268.1| Zea mays PCO069225 mRNA sequence
          Length = 598

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 76  tagtagtggtcggtcggttgtct 98
           |||||||||||||||||||||||
Sbjct: 512 tagtagtggtcggtcggttgtct 490
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>ref|XM_948808.1| Theileria annulata strain Ankara hypothetical protein (TA06135)
            partial mRNA
          Length = 2595

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 343  acgcagtacagcagaaggagtg 364
            ||||||||||||||||||||||
Sbjct: 1769 acgcagtacagcagaaggagtg 1790
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>emb|AL354736.10| Human DNA sequence from clone RP11-205B18 on chromosome 13 Contains the
             5' end of a novel gene (FLJ32909), complete sequence
          Length = 158460

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 450   aaatatgtggaggacaaatata 471
             ||||||||||||||||||||||
Sbjct: 13989 aaatatgtggaggacaaatata 14010
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>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome
          Length = 2572079

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 26     atggcgttgatattagtttgctcta 50
              ||||||||| |||||||||||||||
Sbjct: 302547 atggcgttgctattagtttgctcta 302571
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>gb|AC161812.3| Mus musculus chromosome 15, clone RP23-195I24, complete sequence
          Length = 204464

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 174    aagaggggaagaggcagacag 194
              |||||||||||||||||||||
Sbjct: 140633 aagaggggaagaggcagacag 140613
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>gb|AC130217.4| Mus musculus BAC clone RP23-237P18 from chromosome 13, complete
             sequence
          Length = 198116

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 167   agaacaaaagaggggaagagg 187
             |||||||||||||||||||||
Sbjct: 92983 agaacaaaagaggggaagagg 92963



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 167   agaacaaaagaggggaagagg 187
             |||||||||||||||||||||
Sbjct: 92794 agaacaaaagaggggaagagg 92774
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>gb|AC124055.6| Homo sapiens chromosome 11, clone RP4-608B4, complete sequence
          Length = 133815

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 160   gaaagggagaacaaaagaggg 180
             |||||||||||||||||||||
Sbjct: 45289 gaaagggagaacaaaagaggg 45309
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>gb|AC021032.9| Homo sapiens chromosome 10 clone RP11-180I22, complete sequence
          Length = 160635

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 158   gagaaagggagaacaaaagag 178
             |||||||||||||||||||||
Sbjct: 13364 gagaaagggagaacaaaagag 13344
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>emb|AJ006345.1|HSA6345 Homo sapiens KVLQT1 gene
          Length = 404123

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 160    gaaagggagaacaaaagaggg 180
              |||||||||||||||||||||
Sbjct: 208637 gaaagggagaacaaaagaggg 208617
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>gb|AC021424.6| Homo sapiens chromosome 11, clone RP11-38L8, complete sequence
          Length = 181025

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 160    gaaagggagaacaaaagaggg 180
              |||||||||||||||||||||
Sbjct: 174301 gaaagggagaacaaaagaggg 174321
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>gb|AC104834.4| Mus Musculus Strain C57BL6/J Chromosome 15 RP23-274F23, complete sequence
          Length = 215113

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 174    aagaggggaagaggcagacag 194
              |||||||||||||||||||||
Sbjct: 139400 aagaggggaagaggcagacag 139420
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 567     tcctcgccgacctgccggcac 587
               |||||||||||||||||||||
Sbjct: 2146175 tcctcgccgacctgccggcac 2146155
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>gb|AC002403.1|AC002403 Human Chromosome 11p15.5 pac pDJ608b4, complete sequence
          Length = 132960

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 160   gaaagggagaacaaaagaggg 180
             |||||||||||||||||||||
Sbjct: 45289 gaaagggagaacaaaagaggg 45309
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>gb|U90095.1|U90095 Human Chromosome 11p15.5 pac pDJ74k15, complete sequence
          Length = 120229

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 160    gaaagggagaacaaaagaggg 180
              |||||||||||||||||||||
Sbjct: 113873 gaaagggagaacaaaagaggg 113893
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>gb|AC009391.16| Drosophila melanogaster clone BACR21I23, complete sequence
          Length = 189254

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 419    cagaaagggagcaggaaaga 438
              ||||||||||||||||||||
Sbjct: 151230 cagaaagggagcaggaaaga 151211
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>gb|AC137902.10| Mus musculus chromosome 15, clone RP23-372O9, complete sequence
          Length = 196712

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 159    agaaagggagaacaaaagag 178
              ||||||||||||||||||||
Sbjct: 101729 agaaagggagaacaaaagag 101748
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>gb|AC140339.4| Mus musculus BAC clone RP24-64N14 from chromosome 17, complete sequence
          Length = 229599

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 206   gagccatctatccagctccgagct 229
             ||||||||| ||||||||||||||
Sbjct: 54472 gagccatctctccagctccgagct 54449
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>gb|AC044807.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-412F2, complete
              sequence
          Length = 182150

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 190    gacaggaggaggaacggagc 209
              ||||||||||||||||||||
Sbjct: 163956 gacaggaggaggaacggagc 163937
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>gb|AY294226.1| Uncultured bacterium cosmid gbiox603r, complete sequence
          Length = 40150

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 273   ctcaagcggcagccagcgcg 292
             ||||||||||||||||||||
Sbjct: 12789 ctcaagcggcagccagcgcg 12770
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>gb|AC079276.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-446B13, complete
             sequence
          Length = 205177

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 190   gacaggaggaggaacggagc 209
             ||||||||||||||||||||
Sbjct: 12636 gacaggaggaggaacggagc 12617
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>gb|AC114423.16| Mus musculus chromosome 6, clone RP23-461C23, complete sequence
          Length = 205074

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 420   agaaagggagcaggaaagagatacatat 447
             |||||||||| |||||||||||| ||||
Sbjct: 85759 agaaagggagtaggaaagagatagatat 85786
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>gb|AC127694.3| Mus musculus BAC clone RP23-235J3 from chromosome 7, complete sequence
          Length = 225732

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 203    acggagccatctatccagctccga 226
              |||||||||||| |||||||||||
Sbjct: 133874 acggagccatctctccagctccga 133897
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>emb|AL607067.17| Human DNA sequence from clone RP11-201K10 on chromosome 1 Contains a
            high-mobility group nucleosomal binding domain 2 (HMGN2)
            pseudogene and the KRTCAP2 gene for keratinocyte
            associated protein 2, complete sequence
          Length = 32360

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 438  agatacatatttaaatatgt 457
            ||||||||||||||||||||
Sbjct: 5573 agatacatatttaaatatgt 5554



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 438  agatacatatttaaatatgt 457
            ||||||||||||||||||||
Sbjct: 5550 agatacatatttaaatatgt 5569



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 438  agatacatatttaaatatgt 457
            ||||||||||||||||||||
Sbjct: 5542 agatacatatttaaatatgt 5523
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>emb|AL645821.1| Human DNA sequence from clone RP3-465G10 on chromosome Xq21.1 Contains
             the 5' end of the gene for a novel protein similar to
             phosphoglycerate mutase 3 (LOC349441)(possible pseudogene)
             and the ATP7A gene for Cu++ transporting ATPase alpha
             polypeptide (Menkes syndrome), complete sequence
          Length = 84163

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 436   agagatacatatttaaatat 455
             ||||||||||||||||||||
Sbjct: 33217 agagatacatatttaaatat 33236
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>emb|AL592166.16| Human DNA sequence from clone RP11-269F19 on chromosome 1 Contains the
             KIF2C gene for kinesin family member 2C, a novel gene, the
             RPS8 gene for ribosomal protein S8, a ribosomal protein
             S15a (RPS15A) pseudogene, the VMD2L2 gene for vitelliform
             macular dystrophy-like 2, the CNK gene for
             cytokine-inducible kinase, the gene for a novel protein, a
             novel gene (FLJ31588), the 3' end of the PTCH2 gene for
             patched homolog 2 (Drosophila) and seven CpG islands,
             complete sequence
          Length = 90550

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 158   gagaaagggagaacaaaagagggg 181
             |||||| |||||||||||||||||
Sbjct: 55077 gagaaatggagaacaaaagagggg 55054
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>emb|AL606468.8| Human DNA sequence from clone RP11-15I11 on chromosome 1 Contains the 3'
              end of the RAMP gene for RA-regulated nuclear
              matrix-associated protein, a novel gene and the 3' end of a
              novel gene, complete sequence
          Length = 160200

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 162    aagggagaacaaaagaggggaagaggcagaca 193
              ||||||||||||||||||| ||  ||||||||
Sbjct: 147708 aagggagaacaaaagagggcaaagggcagaca 147739
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>ref|XM_783711.1| PREDICTED: Strongylocentrotus purpuratus similar to ATP synthase,
           H+ transporting, mitochondrial F0 complex, subunit c
           (subunit 9) (LOC583818), mRNA
          Length = 717

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 446 atttaaatatgtggaggaca 465
           ||||||||||||||||||||
Sbjct: 680 atttaaatatgtggaggaca 661
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>emb|AL121900.26|HSBA379J5 Human DNA sequence from clone RP11-379J5 on chromosome 20 Contains the 3'
              end of the SEC23B gene for Sec23 (S. cerevisiae) homolog B,
              two novel genes, the 5' end of the HARS2 gene for
              histidyl-tRNA synthetase 2, a pseudogene similar to part of
              homeobox proteins and two CpG islands, complete sequence
          Length = 149933

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 416    aggcagaaagggagcaggaa 435
              ||||||||||||||||||||
Sbjct: 123368 aggcagaaagggagcaggaa 123349
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>emb|AL118513.17|HSDJ685L9 Human DNA sequence from clone RP4-685L9 on chromosome 20 Contains the
             gene for a novel protein (FLJ90166), the 5' end of a nove
             genel (LOC149773) and two CpG islands, complete sequence
          Length = 92835

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 355   agaaggagtgaagcttaggg 374
             ||||||||||||||||||||
Sbjct: 76829 agaaggagtgaagcttaggg 76848
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>emb|Z94801.1|HS465G10B Human DNA sequence from PAC 465G10 on chromosome X contains Menkes
             Disease (ATP7A) putative Cu++-transporting P-type ATPase
             exons 2 to 21, PGAM-B, ESTs
          Length = 74432

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 436   agagatacatatttaaatat 455
             ||||||||||||||||||||
Sbjct: 41216 agagatacatatttaaatat 41197
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>emb|CR352431.1| Gallus gallus finished cDNA, clone ChEST325l16
          Length = 1124

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 420 agaaagggagcaggaaagag 439
           ||||||||||||||||||||
Sbjct: 584 agaaagggagcaggaaagag 565
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 527      ccatggcgccgccgccgctt 546
                ||||||||||||||||||||
Sbjct: 13835854 ccatggcgccgccgccgctt 13835835
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>gb|AC008028.3|AC008028 Drosophila melanogaster, chromosome 3R, region 98C-98D, BAC clone
              BACR14L13, complete sequence
          Length = 197348

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 438    agatacatatttaaatatgtggag 461
              |||||||||| |||||||||||||
Sbjct: 129169 agatacatatataaatatgtggag 129146
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>gb|AC011308.8| Homo sapiens BAC clone RP11-522N18 from 2, complete sequence
          Length = 124740

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 171   caaaagaggggaagaggcag 190
             ||||||||||||||||||||
Sbjct: 95284 caaaagaggggaagaggcag 95265
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>gb|AC153613.9| Mus musculus 10 BAC RP23-23C9 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 214432

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   agaggggaagaggcagacag 194
             ||||||||||||||||||||
Sbjct: 13046 agaggggaagaggcagacag 13065
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>gb|AC153842.9| Mus musculus 6 BAC RP23-348K12 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 174100

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 175    agaggggaagaggcagacag 194
              ||||||||||||||||||||
Sbjct: 137142 agaggggaagaggcagacag 137161
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>dbj|AP005577.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1655_B12
          Length = 132736

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 527   ccatggcgccgccgccgctt 546
             ||||||||||||||||||||
Sbjct: 85338 ccatggcgccgccgccgctt 85319
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>emb|Z23494.1|HS199ZB12 H. sapiens (D1S421) DNA segment containing (CA) repeat; clone
           AFM199zb12; single read
          Length = 327

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 158 gagaaagggagaacaaaagagggg 181
           |||||| |||||||||||||||||
Sbjct: 250 gagaaatggagaacaaaagagggg 273
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>emb|BX005407.5| Zebrafish DNA sequence from clone CH211-222C22 in linkage group 5,
              complete sequence
          Length = 209796

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    agaaagggagaacaaaagag 178
              ||||||||||||||||||||
Sbjct: 197914 agaaagggagaacaaaagag 197895
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>gb|AE003765.3| Drosophila melanogaster chromosome 3R, section 103 of 118 of the complete
              sequence
          Length = 239049

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 438    agatacatatttaaatatgtggag 461
              |||||||||| |||||||||||||
Sbjct: 104848 agatacatatataaatatgtggag 104825
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>gb|AE003780.4| Drosophila melanogaster chromosome 3R, section 118 of 118 of the complete
              sequence
          Length = 256818

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 419    cagaaagggagcaggaaaga 438
              ||||||||||||||||||||
Sbjct: 218794 cagaaagggagcaggaaaga 218775
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>gb|U40367.1|HSGPDM16 Human glycerol-3-phosphate dehydrogenase (GPD2) gene, nuclear gene
           encoding mitochondrial protein, exon 17, and complete
           cds
          Length = 687

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 171 caaaagaggggaagaggcag 190
           ||||||||||||||||||||
Sbjct: 83  caaaagaggggaagaggcag 64
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>emb|CT025633.3| Pan troglodytes chromosome X clone RP43-007L03 map Xq28, complete
             sequence
          Length = 205943

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 436   agagatacatatttaaatat 455
             ||||||||||||||||||||
Sbjct: 22845 agagatacatatttaaatat 22864
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>emb|AL845503.5| Mouse DNA sequence from clone RP23-292G16 on chromosome 2, complete
            sequence
          Length = 148491

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 176  gaggggaagaggcagacaggaggaggaa 203
            |||||||||||| ||| |||||||||||
Sbjct: 7565 gaggggaagaggaagaaaggaggaggaa 7592
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>emb|AL672251.10| Mouse DNA sequence from clone RP23-16O15 on chromosome 2, complete
              sequence
          Length = 204214

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 423    aagggagcaggaaagagata 442
              ||||||||||||||||||||
Sbjct: 134146 aagggagcaggaaagagata 134165
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>emb|AL928689.7| Mouse DNA sequence from clone RP23-35P3 on chromosome 2, complete
             sequence
          Length = 182529

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 448   ttaaatatgtggaggacaaa 467
             ||||||||||||||||||||
Sbjct: 17564 ttaaatatgtggaggacaaa 17545


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,382,964
Number of Sequences: 3902068
Number of extensions: 5382964
Number of successful extensions: 106926
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106588
Number of HSP's gapped (non-prelim): 336
length of query: 591
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 568
effective length of database: 17,143,297,704
effective search space: 9737393095872
effective search space used: 9737393095872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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