ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags31e23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KLF3_HUMAN (P57682) Krueppel-like factor 3 (Basic krueppel-like ... 33 0.65

>KLF3_HUMAN (P57682) Krueppel-like factor 3 (Basic krueppel-like factor)|
           (CACCC-box-binding protein BKLF) (TEF-2)
          Length = 345

 Score = 33.5 bits (75), Expect = 0.65
 Identities = 24/77 (31%), Positives = 34/77 (44%)
 Frame = +1

Query: 157 KLFLIPLEKRHPAKILTTLDVTIARQSSPPSVFNEPAQTKGPKIFRSGLLGNLQYS*SPT 336
           K F  P    H  + +  +D+T+ ++SSPPS  N P+  K P   R    G    S SP 
Sbjct: 45  KFFQTPEGLSHGIQ-MEPVDLTVNKRSSPPSAGNSPSSLKFPSSHRRASPGLSMPSSSPP 103

Query: 337 ERNCLISSEEIQLIGKP 387
            +     S  +Q  G P
Sbjct: 104 IKKYSPPSPGVQPFGVP 120


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,351,709
Number of Sequences: 219361
Number of extensions: 2092256
Number of successful extensions: 3735
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3732
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7139613222
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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