| Clone Name | rbags30p09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|L27349.1|BLYCRH2A Hordeum vulgare calreticulin (CRH2) mRNA, partial cds Length = 1450 Score = 472 bits (238), Expect = e-130 Identities = 272/288 (94%) Strand = Plus / Minus Query: 1 tgatcacaaaaaggggaacatnatactgagagacaactnataaatcctggcagcagcgca 60 ||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||| Sbjct: 1342 tgatcacaaaaaggggaacatcataatgagagacaactaataaatcctggcagcagcgca 1283 Query: 61 aaggcaaaggcngnctcctctcttccttgtcatctagagctcatcgngcttctnatcatc 120 ||||||||||| | |||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 1282 aaggcaaaggcagcctcctctcttccttgtcatctagagctcatcgtgcttctcatcatc 1223 Query: 121 agaatccttgtcatnctcagcatcagacccagccttgtcgtccttgtnctcatngtcggc 180 |||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 1222 agaatccttgtcatcctcagcatcagacccagccttgtcgtccttgtcctcatcgtcggc 1163 Query: 181 atcctcatnatccaagtcatcatcggcctcaccggccttggaagcatcctnctcttcctt 240 |||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 1162 atcctcatcatccaagtcatcatcgtcctcaccggccttggaagcatcctcctcttcctt 1103 Query: 241 nttcttttcagcctngtcaaaagcagccttctnagcatccttgtgctt 288 ||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 1102 cttcttttcagcctcgtcaaaagcagccttctcagcatccttgtgctt 1055
>gb|L27348.1|BLYCRH1A Hordeum vulgare calreticulin (CRH1) mRNA, partial cds Length = 1472 Score = 472 bits (238), Expect = e-130 Identities = 272/288 (94%) Strand = Plus / Minus Query: 1 tgatcacaaaaaggggaacatnatactgagagacaactnataaatcctggcagcagcgca 60 ||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||| Sbjct: 1334 tgatcacaaaaaggggaacatcataatgagagacaactaataaatcctggcagcagcgca 1275 Query: 61 aaggcaaaggcngnctcctctcttccttgtcatctagagctcatcgngcttctnatcatc 120 ||||||||||| | |||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 1274 aaggcaaaggcagcctcctctcttccttgtcatctagagctcatcgtgcttctcatcatc 1215 Query: 121 agaatccttgtcatnctcagcatcagacccagccttgtcgtccttgtnctcatngtcggc 180 |||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 1214 agaatccttgtcatcctcagcatcagacccagccttgtcgtccttgtcctcatcgtcggc 1155 Query: 181 atcctcatnatccaagtcatcatcggcctcaccggccttggaagcatcctnctcttcctt 240 |||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 1154 atcctcatcatccaagtcatcatcgtcctcaccggccttggaagcatcctcctcttcctt 1095 Query: 241 nttcttttcagcctngtcaaaagcagccttctnagcatccttgtgctt 288 ||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 1094 cttcttttcagcctcgtcaaaagcagccttctcagcatccttgtgctt 1047
>ref|XM_477251.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1539 Score = 168 bits (85), Expect = 6e-39 Identities = 167/197 (84%), Gaps = 3/197 (1%) Strand = Plus / Minus Query: 95 tagagctcatcgngcttctnatcatcagaatccttgtcatnctcagcatcagacccagcc 154 ||||||||||| |||||| |||||||||||||||| ||| ||| |||||||| ||||| Sbjct: 1323 tagagctcatcatgcttctcatcatcagaatccttgccatcctctgcatcagagtcagcc 1264 Query: 155 ttgtcgtc---cttgtnctcatngtcggcatcctcatnatccaagtcatcatcggcctca 211 || || || ||||| ||||| || |||||||| | |||||| ||||||||| ||||| Sbjct: 1263 ttctcatcggccttgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctca 1204 Query: 212 ccggccttggaagcatcctnctcttccttnttcttttcagcctngtcaaaagcagccttc 271 |||||||||| ||| |||| ||||||||| || || || |||| |||||||||||||||| Sbjct: 1203 ccggccttggcagcttcctcctcttccttctttttctctgcctcgtcaaaagcagccttc 1144 Query: 272 tnagcatccttgtgctt 288 | ||||||||||||||| Sbjct: 1143 tcagcatccttgtgctt 1127
>ref|XM_507358.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1058_C08.28-2 mRNA Length = 1557 Score = 168 bits (85), Expect = 6e-39 Identities = 167/197 (84%), Gaps = 3/197 (1%) Strand = Plus / Minus Query: 95 tagagctcatcgngcttctnatcatcagaatccttgtcatnctcagcatcagacccagcc 154 ||||||||||| |||||| |||||||||||||||| ||| ||| |||||||| ||||| Sbjct: 1325 tagagctcatcatgcttctcatcatcagaatccttgccatcctctgcatcagagtcagcc 1266 Query: 155 ttgtcgtc---cttgtnctcatngtcggcatcctcatnatccaagtcatcatcggcctca 211 || || || ||||| ||||| || |||||||| | |||||| ||||||||| ||||| Sbjct: 1265 ttctcatcggccttgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctca 1206 Query: 212 ccggccttggaagcatcctnctcttccttnttcttttcagcctngtcaaaagcagccttc 271 |||||||||| ||| |||| ||||||||| || || || |||| |||||||||||||||| Sbjct: 1205 ccggccttggcagcttcctcctcttccttctttttctctgcctcgtcaaaagcagccttc 1146 Query: 272 tnagcatccttgtgctt 288 | ||||||||||||||| Sbjct: 1145 tcagcatccttgtgctt 1129
>ref|XM_506239.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1058_C08.28-2 mRNA Length = 1585 Score = 168 bits (85), Expect = 6e-39 Identities = 167/197 (84%), Gaps = 3/197 (1%) Strand = Plus / Minus Query: 95 tagagctcatcgngcttctnatcatcagaatccttgtcatnctcagcatcagacccagcc 154 ||||||||||| |||||| |||||||||||||||| ||| ||| |||||||| ||||| Sbjct: 1351 tagagctcatcatgcttctcatcatcagaatccttgccatcctctgcatcagagtcagcc 1292 Query: 155 ttgtcgtc---cttgtnctcatngtcggcatcctcatnatccaagtcatcatcggcctca 211 || || || ||||| ||||| || |||||||| | |||||| ||||||||| ||||| Sbjct: 1291 ttctcatcggccttgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctca 1232 Query: 212 ccggccttggaagcatcctnctcttccttnttcttttcagcctngtcaaaagcagccttc 271 |||||||||| ||| |||| ||||||||| || || || |||| |||||||||||||||| Sbjct: 1231 ccggccttggcagcttcctcctcttccttctttttctctgcctcgtcaaaagcagccttc 1172 Query: 272 tnagcatccttgtgctt 288 | ||||||||||||||| Sbjct: 1171 tcagcatccttgtgctt 1155
>dbj|AK104826.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-F11, full insert sequence Length = 1539 Score = 168 bits (85), Expect = 6e-39 Identities = 167/197 (84%), Gaps = 3/197 (1%) Strand = Plus / Minus Query: 95 tagagctcatcgngcttctnatcatcagaatccttgtcatnctcagcatcagacccagcc 154 ||||||||||| |||||| |||||||||||||||| ||| ||| |||||||| ||||| Sbjct: 1323 tagagctcatcatgcttctcatcatcagaatccttgccatcctctgcatcagagtcagcc 1264 Query: 155 ttgtcgtc---cttgtnctcatngtcggcatcctcatnatccaagtcatcatcggcctca 211 || || || ||||| ||||| || |||||||| | |||||| ||||||||| ||||| Sbjct: 1263 ttctcatcggccttgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctca 1204 Query: 212 ccggccttggaagcatcctnctcttccttnttcttttcagcctngtcaaaagcagccttc 271 |||||||||| ||| |||| ||||||||| || || || |||| |||||||||||||||| Sbjct: 1203 ccggccttggcagcttcctcctcttccttctttttctctgcctcgtcaaaagcagccttc 1144 Query: 272 tnagcatccttgtgctt 288 | ||||||||||||||| Sbjct: 1143 tcagcatccttgtgctt 1127
>dbj|AK099348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025I16, full insert sequence Length = 1556 Score = 168 bits (85), Expect = 6e-39 Identities = 167/197 (84%), Gaps = 3/197 (1%) Strand = Plus / Minus Query: 95 tagagctcatcgngcttctnatcatcagaatccttgtcatnctcagcatcagacccagcc 154 ||||||||||| |||||| |||||||||||||||| ||| ||| |||||||| ||||| Sbjct: 1324 tagagctcatcatgcttctcatcatcagaatccttgccatcctctgcatcagagtcagcc 1265 Query: 155 ttgtcgtc---cttgtnctcatngtcggcatcctcatnatccaagtcatcatcggcctca 211 || || || ||||| ||||| || |||||||| | |||||| ||||||||| ||||| Sbjct: 1264 ttctcatcggccttgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctca 1205 Query: 212 ccggccttggaagcatcctnctcttccttnttcttttcagcctngtcaaaagcagccttc 271 |||||||||| ||| |||| ||||||||| || || || |||| |||||||||||||||| Sbjct: 1204 ccggccttggcagcttcctcctcttccttctttttctctgcctcgtcaaaagcagccttc 1145 Query: 272 tnagcatccttgtgctt 288 | ||||||||||||||| Sbjct: 1144 tcagcatccttgtgctt 1128
>dbj|AK065341.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E04, full insert sequence Length = 1586 Score = 168 bits (85), Expect = 6e-39 Identities = 167/197 (84%), Gaps = 3/197 (1%) Strand = Plus / Minus Query: 95 tagagctcatcgngcttctnatcatcagaatccttgtcatnctcagcatcagacccagcc 154 ||||||||||| |||||| |||||||||||||||| ||| ||| |||||||| ||||| Sbjct: 1351 tagagctcatcatgcttctcatcatcagaatccttgccatcctctgcatcagagtcagcc 1292 Query: 155 ttgtcgtc---cttgtnctcatngtcggcatcctcatnatccaagtcatcatcggcctca 211 || || || ||||| ||||| || |||||||| | |||||| ||||||||| ||||| Sbjct: 1291 ttctcatcggccttgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctca 1232 Query: 212 ccggccttggaagcatcctnctcttccttnttcttttcagcctngtcaaaagcagccttc 271 |||||||||| ||| |||| ||||||||| || || || |||| |||||||||||||||| Sbjct: 1231 ccggccttggcagcttcctcctcttccttctttttctctgcctcgtcaaaagcagccttc 1172 Query: 272 tnagcatccttgtgctt 288 | ||||||||||||||| Sbjct: 1171 tcagcatccttgtgctt 1155
>dbj|AB021259.1| Oryza sativa mRNA for calcium-binding protein, complete cds Length = 1558 Score = 168 bits (85), Expect = 6e-39 Identities = 167/197 (84%), Gaps = 3/197 (1%) Strand = Plus / Minus Query: 95 tagagctcatcgngcttctnatcatcagaatccttgtcatnctcagcatcagacccagcc 154 ||||||||||| |||||| |||||||||||||||| ||| ||| |||||||| ||||| Sbjct: 1304 tagagctcatcatgcttctcatcatcagaatccttgccatcctctgcatcagagtcagcc 1245 Query: 155 ttgtcgtc---cttgtnctcatngtcggcatcctcatnatccaagtcatcatcggcctca 211 || || || ||||| ||||| || |||||||| | |||||| ||||||||| ||||| Sbjct: 1244 ttctcatcggccttgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctca 1185 Query: 212 ccggccttggaagcatcctnctcttccttnttcttttcagcctngtcaaaagcagccttc 271 |||||||||| ||| |||| ||||||||| || || || |||| |||||||||||||||| Sbjct: 1184 ccggccttggcagcttcctcctcttccttctttttctctgcctcgtcaaaagcagccttc 1125 Query: 272 tnagcatccttgtgctt 288 | ||||||||||||||| Sbjct: 1124 tcagcatccttgtgctt 1108
>gb|AY836753.1| Triticum aestivum calreticulin-like protein mRNA, complete cds Length = 1248 Score = 159 bits (80), Expect = 6e-36 Identities = 130/149 (87%) Strand = Plus / Minus Query: 140 gcatcagacccagccttgtcgtccttgtnctcatngtcggcatcctcatnatccaagtca 199 |||||||||||||||||||| ||||||| ||| | ||||| ||||||| |||||||||| Sbjct: 1214 gcatcagacccagccttgtcatccttgtcctcgtcatcggcttcctcatcatccaagtca 1155 Query: 200 tcatcggcctcaccggccttggaagcatcctnctcttccttnttcttttcagcctngtca 259 |||||| |||||| |||||||||||||||| ||||||||| ||||||||||| ||| Sbjct: 1154 tcatcgtcctcactagccttggaagcatcctcctcttccttcttcttttcagcagcgtcg 1095 Query: 260 aaagcagccttctnagcatccttgtgctt 288 ||||||||||||| ||| ||||| ||||| Sbjct: 1094 aaagcagccttctcagcttccttatgctt 1066 Score = 40.1 bits (20), Expect = 3.8 Identities = 27/30 (90%) Strand = Plus / Minus Query: 94 ctagagctcatcgngcttctnatcatcaga 123 ||||||||||||| |||||| |||||||| Sbjct: 1248 ctagagctcatcgtgcttctcgtcatcaga 1219
>ref|XM_477252.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1646 Score = 157 bits (79), Expect = 2e-35 Identities = 156/184 (84%), Gaps = 3/184 (1%) Strand = Plus / Minus Query: 108 gcttctnatcatcagaatccttgtcatnctcagcatcagacccagccttgtcgtc---ct 164 |||||| |||||||||||||||| ||| ||| |||||||| ||||||| || || || Sbjct: 1303 gcttctcatcatcagaatccttgccatcctctgcatcagagtcagccttctcatcggcct 1244 Query: 165 tgtnctcatngtcggcatcctcatnatccaagtcatcatcggcctcaccggccttggaag 224 ||| ||||| || |||||||| | |||||| ||||||||| ||||||||||||||| || Sbjct: 1243 tgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctcaccggccttggcag 1184 Query: 225 catcctnctcttccttnttcttttcagcctngtcaaaagcagccttctnagcatccttgt 284 | |||| ||||||||| || || || |||| ||||||||||||||||| ||||||||||| Sbjct: 1183 cttcctcctcttccttctttttctctgcctcgtcaaaagcagccttctcagcatccttgt 1124 Query: 285 gctt 288 |||| Sbjct: 1123 gctt 1120
>dbj|AK104328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-H03, full insert sequence Length = 1675 Score = 157 bits (79), Expect = 2e-35 Identities = 156/184 (84%), Gaps = 3/184 (1%) Strand = Plus / Minus Query: 108 gcttctnatcatcagaatccttgtcatnctcagcatcagacccagccttgtcgtc---ct 164 |||||| |||||||||||||||| ||| ||| |||||||| ||||||| || || || Sbjct: 1332 gcttctcatcatcagaatccttgccatcctctgcatcagagtcagccttctcatcggcct 1273 Query: 165 tgtnctcatngtcggcatcctcatnatccaagtcatcatcggcctcaccggccttggaag 224 ||| ||||| || |||||||| | |||||| ||||||||| ||||||||||||||| || Sbjct: 1272 tgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctcaccggccttggcag 1213 Query: 225 catcctnctcttccttnttcttttcagcctngtcaaaagcagccttctnagcatccttgt 284 | |||| ||||||||| || || || |||| ||||||||||||||||| ||||||||||| Sbjct: 1212 cttcctcctcttccttctttttctctgcctcgtcaaaagcagccttctcagcatccttgt 1153 Query: 285 gctt 288 |||| Sbjct: 1152 gctt 1149
>emb|X78057.1|ZMCRHR Z.mays CRH mRNA Length = 1183 Score = 71.9 bits (36), Expect = 1e-09 Identities = 51/57 (89%) Strand = Plus / Minus Query: 91 catctagagctcatcgngcttctnatcatcagaatccttgtcatnctcagcatcaga 147 |||||||||||| ||| |||||| |||||||||||||||| ||| ||| |||||||| Sbjct: 969 catctagagctcgtcgtgcttctcatcatcagaatccttgccatcctcggcatcaga 913 Score = 42.1 bits (21), Expect = 0.95 Identities = 53/65 (81%) Strand = Plus / Minus Query: 224 gcatcctnctcttccttnttcttttcagcctngtcaaaagcagccttctnagcatccttg 283 ||||||| |||||||| || || || |||| |||||||||||||| | || |||||| Sbjct: 833 gcatcctcttcttccttttttttctcggcctcatcaaaagcagccttttctgcctccttg 774 Query: 284 tgctt 288 ||||| Sbjct: 773 tgctt 769
>gb|AF190454.1|AF190454 Zea mays calreticulin (CRT) mRNA, complete cds Length = 1545 Score = 71.9 bits (36), Expect = 1e-09 Identities = 51/57 (89%) Strand = Plus / Minus Query: 91 catctagagctcatcgngcttctnatcatcagaatccttgtcatnctcagcatcaga 147 |||||||||||| ||| |||||| |||||||||||||||| ||| ||| |||||||| Sbjct: 1343 catctagagctcgtcgtgcttctcatcatcagaatccttgccatcctcggcatcaga 1287 Score = 42.1 bits (21), Expect = 0.95 Identities = 53/65 (81%) Strand = Plus / Minus Query: 224 gcatcctnctcttccttnttcttttcagcctngtcaaaagcagccttctnagcatccttg 283 ||||||| |||||||| || || || |||| |||||||||||||| | || |||||| Sbjct: 1207 gcatcctcttcttccttctttttctcggcctcatcaaaagcagccttttctgcctccttg 1148 Query: 284 tgctt 288 ||||| Sbjct: 1147 tgctt 1143
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 54.0 bits (27), Expect = 3e-04 Identities = 43/49 (87%) Strand = Plus / Minus Query: 108 gcttctnatcatcagaatccttgtcatnctcagcatcagacccagcctt 156 |||||| |||||||||||||||| ||| ||| |||||||| ||||||| Sbjct: 8172866 gcttctcatcatcagaatccttgccatcctctgcatcagagtcagcctt 8172818 Score = 50.1 bits (25), Expect = 0.004 Identities = 37/41 (90%) Strand = Plus / Minus Query: 190 atccaagtcatcatcggcctcaccggccttggaagcatcct 230 |||||| ||||||||| ||||||||||||||| ||| |||| Sbjct: 8172696 atccaaatcatcatcgtcctcaccggccttggcagcttcct 8172656 Score = 50.1 bits (25), Expect = 0.004 Identities = 42/49 (85%) Strand = Plus / Minus Query: 228 cctnctcttccttnttcttttcagcctngtcaaaagcagccttctnagc 276 ||| ||||||||| || || || |||| ||||||||||||||||| ||| Sbjct: 8172292 cctcctcttccttctttttctctgcctcgtcaaaagcagccttctcagc 8172244
>dbj|AP006266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0003K21 Length = 158810 Score = 54.0 bits (27), Expect = 3e-04 Identities = 43/49 (87%) Strand = Plus / Minus Query: 108 gcttctnatcatcagaatccttgtcatnctcagcatcagacccagcctt 156 |||||| |||||||||||||||| ||| ||| |||||||| ||||||| Sbjct: 55889 gcttctcatcatcagaatccttgccatcctctgcatcagagtcagcctt 55841 Score = 50.1 bits (25), Expect = 0.004 Identities = 37/41 (90%) Strand = Plus / Minus Query: 190 atccaagtcatcatcggcctcaccggccttggaagcatcct 230 |||||| ||||||||| ||||||||||||||| ||| |||| Sbjct: 55719 atccaaatcatcatcgtcctcaccggccttggcagcttcct 55679 Score = 50.1 bits (25), Expect = 0.004 Identities = 42/49 (85%) Strand = Plus / Minus Query: 228 cctnctcttccttnttcttttcagcctngtcaaaagcagccttctnagc 276 ||| ||||||||| || || || |||| ||||||||||||||||| ||| Sbjct: 55315 cctcctcttccttctttttctctgcctcgtcaaaagcagccttctcagc 55267
>dbj|AP003738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1058_C08 Length = 117923 Score = 54.0 bits (27), Expect = 3e-04 Identities = 43/49 (87%) Strand = Plus / Minus Query: 108 gcttctnatcatcagaatccttgtcatnctcagcatcagacccagcctt 156 |||||| |||||||||||||||| ||| ||| |||||||| ||||||| Sbjct: 106638 gcttctcatcatcagaatccttgccatcctctgcatcagagtcagcctt 106590 Score = 50.1 bits (25), Expect = 0.004 Identities = 37/41 (90%) Strand = Plus / Minus Query: 190 atccaagtcatcatcggcctcaccggccttggaagcatcct 230 |||||| ||||||||| ||||||||||||||| ||| |||| Sbjct: 106468 atccaaatcatcatcgtcctcaccggccttggcagcttcct 106428 Score = 50.1 bits (25), Expect = 0.004 Identities = 42/49 (85%) Strand = Plus / Minus Query: 228 cctnctcttccttnttcttttcagcctngtcaaaagcagccttctnagc 276 ||| ||||||||| || || || |||| ||||||||||||||||| ||| Sbjct: 106064 cctcctcttccttctttttctctgcctcgtcaaaagcagccttctcagc 106016
>emb|Z46772.1|ZMCRT1GEN Zea mays CRT1 gene for calcium-binding protein Length = 1342 Score = 44.1 bits (22), Expect = 0.24 Identities = 35/40 (87%) Strand = Plus / Minus Query: 108 gcttctnatcatcagaatccttgtcatnctcagcatcaga 147 |||||| |||||||||||||||| || ||| |||||||| Sbjct: 1307 gcttctcatcatcagaatccttgctatcctcggcatcaga 1268 Score = 42.1 bits (21), Expect = 0.95 Identities = 53/65 (81%) Strand = Plus / Minus Query: 224 gcatcctnctcttccttnttcttttcagcctngtcaaaagcagccttctnagcatccttg 283 ||||||| |||||||| || || || |||| |||||||||||||| | || |||||| Sbjct: 1188 gcatcctcttcttccttctttttctcggcctcatcaaaagcagccttttctgcctccttg 1129 Query: 284 tgctt 288 ||||| Sbjct: 1128 tgctt 1124
>emb|X89813.1|ZMCALPREC Z.mays mRNA for calreticulin precursor Length = 1614 Score = 44.1 bits (22), Expect = 0.24 Identities = 35/40 (87%) Strand = Plus / Minus Query: 108 gcttctnatcatcagaatccttgtcatnctcagcatcaga 147 |||||| |||||||||||||||| || ||| |||||||| Sbjct: 1324 gcttctcatcatcagaatccttgctatcctcggcatcaga 1285 Score = 42.1 bits (21), Expect = 0.95 Identities = 53/65 (81%) Strand = Plus / Minus Query: 224 gcatcctnctcttccttnttcttttcagcctngtcaaaagcagccttctnagcatccttg 283 ||||||| |||||||| || || || |||| |||||||||||||| | || |||||| Sbjct: 1205 gcatcctcttcttccttctttttctcggcctcatcaaaagcagccttttctgcctccttg 1146 Query: 284 tgctt 288 ||||| Sbjct: 1145 tgctt 1141
>gb|AY103855.1| Zea mays PCO074428 mRNA sequence Length = 1787 Score = 44.1 bits (22), Expect = 0.24 Identities = 35/40 (87%) Strand = Plus / Minus Query: 108 gcttctnatcatcagaatccttgtcatnctcagcatcaga 147 |||||| |||||||||||||||| || ||| |||||||| Sbjct: 1381 gcttctcatcatcagaatccttgctatcctcggcatcaga 1342 Score = 42.1 bits (21), Expect = 0.95 Identities = 53/65 (81%) Strand = Plus / Minus Query: 224 gcatcctnctcttccttnttcttttcagcctngtcaaaagcagccttctnagcatccttg 283 ||||||| |||||||| || || || |||| |||||||||||||| | || |||||| Sbjct: 1262 gcatcctcttcttccttctttttctcggcctcatcaaaagcagccttttctgcctccttg 1203 Query: 284 tgctt 288 ||||| Sbjct: 1202 tgctt 1198
>emb|AJ002057.1|BVMRNAC Beta vulgaris mRNA for calreticulin Length = 1564 Score = 42.1 bits (21), Expect = 0.95 Identities = 29/32 (90%) Strand = Plus / Minus Query: 257 tcaaaagcagccttctnagcatccttgtgctt 288 |||||||||||||| | ||||||||| ||||| Sbjct: 1116 tcaaaagcagccttttcagcatccttttgctt 1085
>emb|AL645848.15| Mouse DNA sequence from clone RP23-133B13 on chromosome X, complete sequence Length = 175689 Score = 42.1 bits (21), Expect = 0.95 Identities = 21/21 (100%) Strand = Plus / Plus Query: 79 tctcttccttgtcatctagag 99 ||||||||||||||||||||| Sbjct: 86671 tctcttccttgtcatctagag 86691
>gb|AC160109.2| Mus musculus BAC clone RP24-169I22 from chromosome 13, complete sequence Length = 151819 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 tcctctcttccttgtcatct 95 |||||||||||||||||||| Sbjct: 61640 tcctctcttccttgtcatct 61659
>gb|AC010063.7| Drosophila melanogaster 3L BAC RP98-16A3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 194006 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 ctggcagcagcgcaaaggca 66 |||||||||||||||||||| Sbjct: 63820 ctggcagcagcgcaaaggca 63839
>gb|AE003473.3| Drosophila melanogaster chromosome 3L, section 7 of 83 of the complete sequence Length = 315108 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ctggcagcagcgcaaaggca 66 |||||||||||||||||||| Sbjct: 168075 ctggcagcagcgcaaaggca 168056 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,539,236 Number of Sequences: 3902068 Number of extensions: 1539236 Number of successful extensions: 25887 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 25 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 25827 Number of HSP's gapped (non-prelim): 51 length of query: 288 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 266 effective length of database: 17,147,199,772 effective search space: 4561155139352 effective search space used: 4561155139352 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)