ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags30p09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|L27349.1|BLYCRH2A Hordeum vulgare calreticulin (CRH2) mRNA, p... 472 e-130
2gb|L27348.1|BLYCRH1A Hordeum vulgare calreticulin (CRH1) mRNA, p... 472 e-130
3ref|XM_477251.1| Oryza sativa (japonica cultivar-group), mRNA 168 6e-39
4ref|XM_507358.1| PREDICTED Oryza sativa (japonica cultivar-group... 168 6e-39
5ref|XM_506239.2| PREDICTED Oryza sativa (japonica cultivar-group... 168 6e-39
6dbj|AK104826.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 6e-39
7dbj|AK099348.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 6e-39
8dbj|AK065341.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 6e-39
9dbj|AB021259.1| Oryza sativa mRNA for calcium-binding protein, c... 168 6e-39
10gb|AY836753.1| Triticum aestivum calreticulin-like protein mRNA,... 159 6e-36
11ref|XM_477252.1| Oryza sativa (japonica cultivar-group), mRNA 157 2e-35
12dbj|AK104328.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 2e-35
13emb|X78057.1|ZMCRHR Z.mays CRH mRNA 72 1e-09
14gb|AF190454.1|AF190454 Zea mays calreticulin (CRT) mRNA, complet... 72 1e-09
15dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 54 3e-04
16dbj|AP006266.3| Oryza sativa (japonica cultivar-group) genomic D... 54 3e-04
17dbj|AP003738.3| Oryza sativa (japonica cultivar-group) genomic D... 54 3e-04
18emb|Z46772.1|ZMCRT1GEN Zea mays CRT1 gene for calcium-binding pr... 44 0.24
19emb|X89813.1|ZMCALPREC Z.mays mRNA for calreticulin precursor 44 0.24
20gb|AY103855.1| Zea mays PCO074428 mRNA sequence 44 0.24
21emb|AJ002057.1|BVMRNAC Beta vulgaris mRNA for calreticulin 42 0.95
22emb|AL645848.15| Mouse DNA sequence from clone RP23-133B13 on ch... 42 0.95
23gb|AC160109.2| Mus musculus BAC clone RP24-169I22 from chromosom... 40 3.8
24gb|AC010063.7| Drosophila melanogaster 3L BAC RP98-16A3 (Roswell... 40 3.8
25gb|AE003473.3| Drosophila melanogaster chromosome 3L, section 7 ... 40 3.8

>gb|L27349.1|BLYCRH2A Hordeum vulgare calreticulin (CRH2) mRNA, partial cds
          Length = 1450

 Score =  472 bits (238), Expect = e-130
 Identities = 272/288 (94%)
 Strand = Plus / Minus

                                                                        
Query: 1    tgatcacaaaaaggggaacatnatactgagagacaactnataaatcctggcagcagcgca 60
            ||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||
Sbjct: 1342 tgatcacaaaaaggggaacatcataatgagagacaactaataaatcctggcagcagcgca 1283

                                                                        
Query: 61   aaggcaaaggcngnctcctctcttccttgtcatctagagctcatcgngcttctnatcatc 120
            ||||||||||| | |||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 1282 aaggcaaaggcagcctcctctcttccttgtcatctagagctcatcgtgcttctcatcatc 1223

                                                                        
Query: 121  agaatccttgtcatnctcagcatcagacccagccttgtcgtccttgtnctcatngtcggc 180
            |||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 1222 agaatccttgtcatcctcagcatcagacccagccttgtcgtccttgtcctcatcgtcggc 1163

                                                                        
Query: 181  atcctcatnatccaagtcatcatcggcctcaccggccttggaagcatcctnctcttcctt 240
            |||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 1162 atcctcatcatccaagtcatcatcgtcctcaccggccttggaagcatcctcctcttcctt 1103

                                                            
Query: 241  nttcttttcagcctngtcaaaagcagccttctnagcatccttgtgctt 288
             ||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 1102 cttcttttcagcctcgtcaaaagcagccttctcagcatccttgtgctt 1055



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>gb|L27348.1|BLYCRH1A Hordeum vulgare calreticulin (CRH1) mRNA, partial cds
          Length = 1472

 Score =  472 bits (238), Expect = e-130
 Identities = 272/288 (94%)
 Strand = Plus / Minus

                                                                        
Query: 1    tgatcacaaaaaggggaacatnatactgagagacaactnataaatcctggcagcagcgca 60
            ||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||
Sbjct: 1334 tgatcacaaaaaggggaacatcataatgagagacaactaataaatcctggcagcagcgca 1275

                                                                        
Query: 61   aaggcaaaggcngnctcctctcttccttgtcatctagagctcatcgngcttctnatcatc 120
            ||||||||||| | |||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 1274 aaggcaaaggcagcctcctctcttccttgtcatctagagctcatcgtgcttctcatcatc 1215

                                                                        
Query: 121  agaatccttgtcatnctcagcatcagacccagccttgtcgtccttgtnctcatngtcggc 180
            |||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 1214 agaatccttgtcatcctcagcatcagacccagccttgtcgtccttgtcctcatcgtcggc 1155

                                                                        
Query: 181  atcctcatnatccaagtcatcatcggcctcaccggccttggaagcatcctnctcttcctt 240
            |||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 1154 atcctcatcatccaagtcatcatcgtcctcaccggccttggaagcatcctcctcttcctt 1095

                                                            
Query: 241  nttcttttcagcctngtcaaaagcagccttctnagcatccttgtgctt 288
             ||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 1094 cttcttttcagcctcgtcaaaagcagccttctcagcatccttgtgctt 1047



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>ref|XM_477251.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1539

 Score =  168 bits (85), Expect = 6e-39
 Identities = 167/197 (84%), Gaps = 3/197 (1%)
 Strand = Plus / Minus

                                                                        
Query: 95   tagagctcatcgngcttctnatcatcagaatccttgtcatnctcagcatcagacccagcc 154
            |||||||||||  |||||| |||||||||||||||| ||| ||| ||||||||  |||||
Sbjct: 1323 tagagctcatcatgcttctcatcatcagaatccttgccatcctctgcatcagagtcagcc 1264

                                                                        
Query: 155  ttgtcgtc---cttgtnctcatngtcggcatcctcatnatccaagtcatcatcggcctca 211
            || || ||   ||||| |||||  || |||||||| | |||||| ||||||||| |||||
Sbjct: 1263 ttctcatcggccttgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctca 1204

                                                                        
Query: 212  ccggccttggaagcatcctnctcttccttnttcttttcagcctngtcaaaagcagccttc 271
            |||||||||| ||| |||| ||||||||| || || || |||| ||||||||||||||||
Sbjct: 1203 ccggccttggcagcttcctcctcttccttctttttctctgcctcgtcaaaagcagccttc 1144

                             
Query: 272  tnagcatccttgtgctt 288
            | |||||||||||||||
Sbjct: 1143 tcagcatccttgtgctt 1127



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>ref|XM_507358.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1058_C08.28-2
            mRNA
          Length = 1557

 Score =  168 bits (85), Expect = 6e-39
 Identities = 167/197 (84%), Gaps = 3/197 (1%)
 Strand = Plus / Minus

                                                                        
Query: 95   tagagctcatcgngcttctnatcatcagaatccttgtcatnctcagcatcagacccagcc 154
            |||||||||||  |||||| |||||||||||||||| ||| ||| ||||||||  |||||
Sbjct: 1325 tagagctcatcatgcttctcatcatcagaatccttgccatcctctgcatcagagtcagcc 1266

                                                                        
Query: 155  ttgtcgtc---cttgtnctcatngtcggcatcctcatnatccaagtcatcatcggcctca 211
            || || ||   ||||| |||||  || |||||||| | |||||| ||||||||| |||||
Sbjct: 1265 ttctcatcggccttgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctca 1206

                                                                        
Query: 212  ccggccttggaagcatcctnctcttccttnttcttttcagcctngtcaaaagcagccttc 271
            |||||||||| ||| |||| ||||||||| || || || |||| ||||||||||||||||
Sbjct: 1205 ccggccttggcagcttcctcctcttccttctttttctctgcctcgtcaaaagcagccttc 1146

                             
Query: 272  tnagcatccttgtgctt 288
            | |||||||||||||||
Sbjct: 1145 tcagcatccttgtgctt 1129



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>ref|XM_506239.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1058_C08.28-2
            mRNA
          Length = 1585

 Score =  168 bits (85), Expect = 6e-39
 Identities = 167/197 (84%), Gaps = 3/197 (1%)
 Strand = Plus / Minus

                                                                        
Query: 95   tagagctcatcgngcttctnatcatcagaatccttgtcatnctcagcatcagacccagcc 154
            |||||||||||  |||||| |||||||||||||||| ||| ||| ||||||||  |||||
Sbjct: 1351 tagagctcatcatgcttctcatcatcagaatccttgccatcctctgcatcagagtcagcc 1292

                                                                        
Query: 155  ttgtcgtc---cttgtnctcatngtcggcatcctcatnatccaagtcatcatcggcctca 211
            || || ||   ||||| |||||  || |||||||| | |||||| ||||||||| |||||
Sbjct: 1291 ttctcatcggccttgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctca 1232

                                                                        
Query: 212  ccggccttggaagcatcctnctcttccttnttcttttcagcctngtcaaaagcagccttc 271
            |||||||||| ||| |||| ||||||||| || || || |||| ||||||||||||||||
Sbjct: 1231 ccggccttggcagcttcctcctcttccttctttttctctgcctcgtcaaaagcagccttc 1172

                             
Query: 272  tnagcatccttgtgctt 288
            | |||||||||||||||
Sbjct: 1171 tcagcatccttgtgctt 1155



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>dbj|AK104826.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-F11, full
            insert sequence
          Length = 1539

 Score =  168 bits (85), Expect = 6e-39
 Identities = 167/197 (84%), Gaps = 3/197 (1%)
 Strand = Plus / Minus

                                                                        
Query: 95   tagagctcatcgngcttctnatcatcagaatccttgtcatnctcagcatcagacccagcc 154
            |||||||||||  |||||| |||||||||||||||| ||| ||| ||||||||  |||||
Sbjct: 1323 tagagctcatcatgcttctcatcatcagaatccttgccatcctctgcatcagagtcagcc 1264

                                                                        
Query: 155  ttgtcgtc---cttgtnctcatngtcggcatcctcatnatccaagtcatcatcggcctca 211
            || || ||   ||||| |||||  || |||||||| | |||||| ||||||||| |||||
Sbjct: 1263 ttctcatcggccttgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctca 1204

                                                                        
Query: 212  ccggccttggaagcatcctnctcttccttnttcttttcagcctngtcaaaagcagccttc 271
            |||||||||| ||| |||| ||||||||| || || || |||| ||||||||||||||||
Sbjct: 1203 ccggccttggcagcttcctcctcttccttctttttctctgcctcgtcaaaagcagccttc 1144

                             
Query: 272  tnagcatccttgtgctt 288
            | |||||||||||||||
Sbjct: 1143 tcagcatccttgtgctt 1127



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>dbj|AK099348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025I16, full
            insert sequence
          Length = 1556

 Score =  168 bits (85), Expect = 6e-39
 Identities = 167/197 (84%), Gaps = 3/197 (1%)
 Strand = Plus / Minus

                                                                        
Query: 95   tagagctcatcgngcttctnatcatcagaatccttgtcatnctcagcatcagacccagcc 154
            |||||||||||  |||||| |||||||||||||||| ||| ||| ||||||||  |||||
Sbjct: 1324 tagagctcatcatgcttctcatcatcagaatccttgccatcctctgcatcagagtcagcc 1265

                                                                        
Query: 155  ttgtcgtc---cttgtnctcatngtcggcatcctcatnatccaagtcatcatcggcctca 211
            || || ||   ||||| |||||  || |||||||| | |||||| ||||||||| |||||
Sbjct: 1264 ttctcatcggccttgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctca 1205

                                                                        
Query: 212  ccggccttggaagcatcctnctcttccttnttcttttcagcctngtcaaaagcagccttc 271
            |||||||||| ||| |||| ||||||||| || || || |||| ||||||||||||||||
Sbjct: 1204 ccggccttggcagcttcctcctcttccttctttttctctgcctcgtcaaaagcagccttc 1145

                             
Query: 272  tnagcatccttgtgctt 288
            | |||||||||||||||
Sbjct: 1144 tcagcatccttgtgctt 1128



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>dbj|AK065341.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E04, full
            insert sequence
          Length = 1586

 Score =  168 bits (85), Expect = 6e-39
 Identities = 167/197 (84%), Gaps = 3/197 (1%)
 Strand = Plus / Minus

                                                                        
Query: 95   tagagctcatcgngcttctnatcatcagaatccttgtcatnctcagcatcagacccagcc 154
            |||||||||||  |||||| |||||||||||||||| ||| ||| ||||||||  |||||
Sbjct: 1351 tagagctcatcatgcttctcatcatcagaatccttgccatcctctgcatcagagtcagcc 1292

                                                                        
Query: 155  ttgtcgtc---cttgtnctcatngtcggcatcctcatnatccaagtcatcatcggcctca 211
            || || ||   ||||| |||||  || |||||||| | |||||| ||||||||| |||||
Sbjct: 1291 ttctcatcggccttgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctca 1232

                                                                        
Query: 212  ccggccttggaagcatcctnctcttccttnttcttttcagcctngtcaaaagcagccttc 271
            |||||||||| ||| |||| ||||||||| || || || |||| ||||||||||||||||
Sbjct: 1231 ccggccttggcagcttcctcctcttccttctttttctctgcctcgtcaaaagcagccttc 1172

                             
Query: 272  tnagcatccttgtgctt 288
            | |||||||||||||||
Sbjct: 1171 tcagcatccttgtgctt 1155



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>dbj|AB021259.1| Oryza sativa mRNA for calcium-binding protein, complete cds
          Length = 1558

 Score =  168 bits (85), Expect = 6e-39
 Identities = 167/197 (84%), Gaps = 3/197 (1%)
 Strand = Plus / Minus

                                                                        
Query: 95   tagagctcatcgngcttctnatcatcagaatccttgtcatnctcagcatcagacccagcc 154
            |||||||||||  |||||| |||||||||||||||| ||| ||| ||||||||  |||||
Sbjct: 1304 tagagctcatcatgcttctcatcatcagaatccttgccatcctctgcatcagagtcagcc 1245

                                                                        
Query: 155  ttgtcgtc---cttgtnctcatngtcggcatcctcatnatccaagtcatcatcggcctca 211
            || || ||   ||||| |||||  || |||||||| | |||||| ||||||||| |||||
Sbjct: 1244 ttctcatcggccttgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctca 1185

                                                                        
Query: 212  ccggccttggaagcatcctnctcttccttnttcttttcagcctngtcaaaagcagccttc 271
            |||||||||| ||| |||| ||||||||| || || || |||| ||||||||||||||||
Sbjct: 1184 ccggccttggcagcttcctcctcttccttctttttctctgcctcgtcaaaagcagccttc 1125

                             
Query: 272  tnagcatccttgtgctt 288
            | |||||||||||||||
Sbjct: 1124 tcagcatccttgtgctt 1108



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>gb|AY836753.1| Triticum aestivum calreticulin-like protein mRNA, complete cds
          Length = 1248

 Score =  159 bits (80), Expect = 6e-36
 Identities = 130/149 (87%)
 Strand = Plus / Minus

                                                                        
Query: 140  gcatcagacccagccttgtcgtccttgtnctcatngtcggcatcctcatnatccaagtca 199
            |||||||||||||||||||| ||||||| ||| |  ||||| ||||||| ||||||||||
Sbjct: 1214 gcatcagacccagccttgtcatccttgtcctcgtcatcggcttcctcatcatccaagtca 1155

                                                                        
Query: 200  tcatcggcctcaccggccttggaagcatcctnctcttccttnttcttttcagcctngtca 259
            |||||| ||||||  |||||||||||||||| ||||||||| |||||||||||   ||| 
Sbjct: 1154 tcatcgtcctcactagccttggaagcatcctcctcttccttcttcttttcagcagcgtcg 1095

                                         
Query: 260  aaagcagccttctnagcatccttgtgctt 288
            ||||||||||||| ||| ||||| |||||
Sbjct: 1094 aaagcagccttctcagcttccttatgctt 1066



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 27/30 (90%)
 Strand = Plus / Minus

                                          
Query: 94   ctagagctcatcgngcttctnatcatcaga 123
            ||||||||||||| ||||||  ||||||||
Sbjct: 1248 ctagagctcatcgtgcttctcgtcatcaga 1219



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>ref|XM_477252.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1646

 Score =  157 bits (79), Expect = 2e-35
 Identities = 156/184 (84%), Gaps = 3/184 (1%)
 Strand = Plus / Minus

                                                                        
Query: 108  gcttctnatcatcagaatccttgtcatnctcagcatcagacccagccttgtcgtc---ct 164
            |||||| |||||||||||||||| ||| ||| ||||||||  ||||||| || ||   ||
Sbjct: 1303 gcttctcatcatcagaatccttgccatcctctgcatcagagtcagccttctcatcggcct 1244

                                                                        
Query: 165  tgtnctcatngtcggcatcctcatnatccaagtcatcatcggcctcaccggccttggaag 224
            ||| |||||  || |||||||| | |||||| ||||||||| ||||||||||||||| ||
Sbjct: 1243 tgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctcaccggccttggcag 1184

                                                                        
Query: 225  catcctnctcttccttnttcttttcagcctngtcaaaagcagccttctnagcatccttgt 284
            | |||| ||||||||| || || || |||| ||||||||||||||||| |||||||||||
Sbjct: 1183 cttcctcctcttccttctttttctctgcctcgtcaaaagcagccttctcagcatccttgt 1124

                
Query: 285  gctt 288
            ||||
Sbjct: 1123 gctt 1120



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>dbj|AK104328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-H03, full
            insert sequence
          Length = 1675

 Score =  157 bits (79), Expect = 2e-35
 Identities = 156/184 (84%), Gaps = 3/184 (1%)
 Strand = Plus / Minus

                                                                        
Query: 108  gcttctnatcatcagaatccttgtcatnctcagcatcagacccagccttgtcgtc---ct 164
            |||||| |||||||||||||||| ||| ||| ||||||||  ||||||| || ||   ||
Sbjct: 1332 gcttctcatcatcagaatccttgccatcctctgcatcagagtcagccttctcatcggcct 1273

                                                                        
Query: 165  tgtnctcatngtcggcatcctcatnatccaagtcatcatcggcctcaccggccttggaag 224
            ||| |||||  || |||||||| | |||||| ||||||||| ||||||||||||||| ||
Sbjct: 1272 tgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctcaccggccttggcag 1213

                                                                        
Query: 225  catcctnctcttccttnttcttttcagcctngtcaaaagcagccttctnagcatccttgt 284
            | |||| ||||||||| || || || |||| ||||||||||||||||| |||||||||||
Sbjct: 1212 cttcctcctcttccttctttttctctgcctcgtcaaaagcagccttctcagcatccttgt 1153

                
Query: 285  gctt 288
            ||||
Sbjct: 1152 gctt 1149



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>emb|X78057.1|ZMCRHR Z.mays CRH mRNA
          Length = 1183

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                    
Query: 91  catctagagctcatcgngcttctnatcatcagaatccttgtcatnctcagcatcaga 147
           |||||||||||| ||| |||||| |||||||||||||||| ||| ||| ||||||||
Sbjct: 969 catctagagctcgtcgtgcttctcatcatcagaatccttgccatcctcggcatcaga 913



 Score = 42.1 bits (21), Expect = 0.95
 Identities = 53/65 (81%)
 Strand = Plus / Minus

                                                                       
Query: 224 gcatcctnctcttccttnttcttttcagcctngtcaaaagcagccttctnagcatccttg 283
           |||||||  |||||||| || || || ||||  |||||||||||||| |  || ||||||
Sbjct: 833 gcatcctcttcttccttttttttctcggcctcatcaaaagcagccttttctgcctccttg 774

                
Query: 284 tgctt 288
           |||||
Sbjct: 773 tgctt 769



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>gb|AF190454.1|AF190454 Zea mays calreticulin (CRT) mRNA, complete cds
          Length = 1545

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                     
Query: 91   catctagagctcatcgngcttctnatcatcagaatccttgtcatnctcagcatcaga 147
            |||||||||||| ||| |||||| |||||||||||||||| ||| ||| ||||||||
Sbjct: 1343 catctagagctcgtcgtgcttctcatcatcagaatccttgccatcctcggcatcaga 1287



 Score = 42.1 bits (21), Expect = 0.95
 Identities = 53/65 (81%)
 Strand = Plus / Minus

                                                                        
Query: 224  gcatcctnctcttccttnttcttttcagcctngtcaaaagcagccttctnagcatccttg 283
            |||||||  |||||||| || || || ||||  |||||||||||||| |  || ||||||
Sbjct: 1207 gcatcctcttcttccttctttttctcggcctcatcaaaagcagccttttctgcctccttg 1148

                 
Query: 284  tgctt 288
            |||||
Sbjct: 1147 tgctt 1143



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                                
Query: 108     gcttctnatcatcagaatccttgtcatnctcagcatcagacccagcctt 156
               |||||| |||||||||||||||| ||| ||| ||||||||  |||||||
Sbjct: 8172866 gcttctcatcatcagaatccttgccatcctctgcatcagagtcagcctt 8172818



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                        
Query: 190     atccaagtcatcatcggcctcaccggccttggaagcatcct 230
               |||||| ||||||||| ||||||||||||||| ||| ||||
Sbjct: 8172696 atccaaatcatcatcgtcctcaccggccttggcagcttcct 8172656



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                                
Query: 228     cctnctcttccttnttcttttcagcctngtcaaaagcagccttctnagc 276
               ||| ||||||||| || || || |||| ||||||||||||||||| |||
Sbjct: 8172292 cctcctcttccttctttttctctgcctcgtcaaaagcagccttctcagc 8172244



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>dbj|AP006266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0003K21
          Length = 158810

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                              
Query: 108   gcttctnatcatcagaatccttgtcatnctcagcatcagacccagcctt 156
             |||||| |||||||||||||||| ||| ||| ||||||||  |||||||
Sbjct: 55889 gcttctcatcatcagaatccttgccatcctctgcatcagagtcagcctt 55841



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 190   atccaagtcatcatcggcctcaccggccttggaagcatcct 230
             |||||| ||||||||| ||||||||||||||| ||| ||||
Sbjct: 55719 atccaaatcatcatcgtcctcaccggccttggcagcttcct 55679



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                              
Query: 228   cctnctcttccttnttcttttcagcctngtcaaaagcagccttctnagc 276
             ||| ||||||||| || || || |||| ||||||||||||||||| |||
Sbjct: 55315 cctcctcttccttctttttctctgcctcgtcaaaagcagccttctcagc 55267



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>dbj|AP003738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1058_C08
          Length = 117923

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                               
Query: 108    gcttctnatcatcagaatccttgtcatnctcagcatcagacccagcctt 156
              |||||| |||||||||||||||| ||| ||| ||||||||  |||||||
Sbjct: 106638 gcttctcatcatcagaatccttgccatcctctgcatcagagtcagcctt 106590



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                       
Query: 190    atccaagtcatcatcggcctcaccggccttggaagcatcct 230
              |||||| ||||||||| ||||||||||||||| ||| ||||
Sbjct: 106468 atccaaatcatcatcgtcctcaccggccttggcagcttcct 106428



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                               
Query: 228    cctnctcttccttnttcttttcagcctngtcaaaagcagccttctnagc 276
              ||| ||||||||| || || || |||| ||||||||||||||||| |||
Sbjct: 106064 cctcctcttccttctttttctctgcctcgtcaaaagcagccttctcagc 106016



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>emb|Z46772.1|ZMCRT1GEN Zea mays CRT1 gene for calcium-binding protein
          Length = 1342

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 108  gcttctnatcatcagaatccttgtcatnctcagcatcaga 147
            |||||| ||||||||||||||||  || ||| ||||||||
Sbjct: 1307 gcttctcatcatcagaatccttgctatcctcggcatcaga 1268



 Score = 42.1 bits (21), Expect = 0.95
 Identities = 53/65 (81%)
 Strand = Plus / Minus

                                                                        
Query: 224  gcatcctnctcttccttnttcttttcagcctngtcaaaagcagccttctnagcatccttg 283
            |||||||  |||||||| || || || ||||  |||||||||||||| |  || ||||||
Sbjct: 1188 gcatcctcttcttccttctttttctcggcctcatcaaaagcagccttttctgcctccttg 1129

                 
Query: 284  tgctt 288
            |||||
Sbjct: 1128 tgctt 1124



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>emb|X89813.1|ZMCALPREC Z.mays mRNA for calreticulin precursor
          Length = 1614

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 108  gcttctnatcatcagaatccttgtcatnctcagcatcaga 147
            |||||| ||||||||||||||||  || ||| ||||||||
Sbjct: 1324 gcttctcatcatcagaatccttgctatcctcggcatcaga 1285



 Score = 42.1 bits (21), Expect = 0.95
 Identities = 53/65 (81%)
 Strand = Plus / Minus

                                                                        
Query: 224  gcatcctnctcttccttnttcttttcagcctngtcaaaagcagccttctnagcatccttg 283
            |||||||  |||||||| || || || ||||  |||||||||||||| |  || ||||||
Sbjct: 1205 gcatcctcttcttccttctttttctcggcctcatcaaaagcagccttttctgcctccttg 1146

                 
Query: 284  tgctt 288
            |||||
Sbjct: 1145 tgctt 1141



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>gb|AY103855.1| Zea mays PCO074428 mRNA sequence
          Length = 1787

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 108  gcttctnatcatcagaatccttgtcatnctcagcatcaga 147
            |||||| ||||||||||||||||  || ||| ||||||||
Sbjct: 1381 gcttctcatcatcagaatccttgctatcctcggcatcaga 1342



 Score = 42.1 bits (21), Expect = 0.95
 Identities = 53/65 (81%)
 Strand = Plus / Minus

                                                                        
Query: 224  gcatcctnctcttccttnttcttttcagcctngtcaaaagcagccttctnagcatccttg 283
            |||||||  |||||||| || || || ||||  |||||||||||||| |  || ||||||
Sbjct: 1262 gcatcctcttcttccttctttttctcggcctcatcaaaagcagccttttctgcctccttg 1203

                 
Query: 284  tgctt 288
            |||||
Sbjct: 1202 tgctt 1198



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>emb|AJ002057.1|BVMRNAC Beta vulgaris mRNA for calreticulin
          Length = 1564

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 257  tcaaaagcagccttctnagcatccttgtgctt 288
            |||||||||||||| | ||||||||| |||||
Sbjct: 1116 tcaaaagcagccttttcagcatccttttgctt 1085



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>emb|AL645848.15| Mouse DNA sequence from clone RP23-133B13 on chromosome X, complete
             sequence
          Length = 175689

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 79    tctcttccttgtcatctagag 99
             |||||||||||||||||||||
Sbjct: 86671 tctcttccttgtcatctagag 86691



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>gb|AC160109.2| Mus musculus BAC clone RP24-169I22 from chromosome 13, complete
             sequence
          Length = 151819

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    tcctctcttccttgtcatct 95
             ||||||||||||||||||||
Sbjct: 61640 tcctctcttccttgtcatct 61659



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>gb|AC010063.7| Drosophila melanogaster 3L BAC RP98-16A3 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 194006

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    ctggcagcagcgcaaaggca 66
             ||||||||||||||||||||
Sbjct: 63820 ctggcagcagcgcaaaggca 63839



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>gb|AE003473.3| Drosophila melanogaster chromosome 3L, section 7 of 83 of the complete
              sequence
          Length = 315108

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 47     ctggcagcagcgcaaaggca 66
              ||||||||||||||||||||
Sbjct: 168075 ctggcagcagcgcaaaggca 168056


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,539,236
Number of Sequences: 3902068
Number of extensions: 1539236
Number of successful extensions: 25887
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 25827
Number of HSP's gapped (non-prelim): 51
length of query: 288
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 266
effective length of database: 17,147,199,772
effective search space: 4561155139352
effective search space used: 4561155139352
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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