ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags30p07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_472545.1| Oryza sativa (japonica cultivar-group), predic... 351 2e-93
2dbj|AK101973.1| Oryza sativa (japonica cultivar-group) cDNA clon... 351 2e-93
3emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clon... 264 4e-67
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 264 4e-67
5gb|AY110636.1| Zea mays CL4177_1 mRNA sequence 264 4e-67
6dbj|AK105181.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 5e-20
7ref|XM_466685.1| Oryza sativa (japonica cultivar-group), mRNA 56 2e-04
8gb|AC146272.3| Pan troglodytes BAC clone RP43-29H6 from 7, compl... 44 0.61
9gb|AC142352.1| Pan troglodytes BAC clone RP43-21K18 from 7, comp... 44 0.61
10gb|AC087069.3| Homo sapiens chromosome 7 clone RP11-7P19, comple... 44 0.61
11dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.61
12dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.61
13gb|AY105803.1| Zea mays PCO143734 mRNA sequence 44 0.61
14gb|AC138381.10| Mus musculus chromosome 6, clone RP24-328J8, com... 42 2.4
15emb|AL354829.8| Human DNA sequence from clone RP11-218B22 on chr... 42 2.4
16gb|AC109296.16| Mus musculus chromosome 1, clone RP24-240J15, co... 40 9.5
17gb|AC121143.12| Mus musculus chromosome 1, clone RP24-177B16, co... 40 9.5
18ref|NM_103325.1| Arabidopsis thaliana adenyl-nucleotide exchange... 40 9.5
19ref|NM_179420.1| Arabidopsis thaliana adenyl-nucleotide exchange... 40 9.5
20gb|AC163295.2| Mus musculus BAC clone RP23-132K20 from chromosom... 40 9.5
21gb|AC125331.4| Mus musculus chromosome 7 clone RP23-11L1, comple... 40 9.5
22gb|AC122802.2| Mus musculus BAC clone RP24-136N24 from 6, comple... 40 9.5
23emb|BX957326.8| Zebrafish DNA sequence from clone DKEY-31B16 in ... 40 9.5
24emb|Z93928.1|HS127B14 Human DNA sequence from clone RP1-127B14 o... 40 9.5
25emb|Z82189.1|HS170A21 Human DNA sequence from clone RP1-170A21 o... 40 9.5
26emb|AL732327.6| Human DNA sequence from clone RP11-387P24 on chr... 40 9.5
27gb|AE014818.1| Plasmodium falciparum 3D7 chromosome 14 section 3... 40 9.5
28gb|AY117176.1| Arabidopsis thaliana putative heat shock protein ... 40 9.5
29gb|AY065397.1| Arabidopsis thaliana putative heat shock protein ... 40 9.5
30gb|AC005013.3| Homo sapiens BAC clone GS1-165L15 from 7, complet... 40 9.5
31gb|AC090009.9| Homo sapiens 12 BAC RP11-724J16 (Roswell Park Can... 40 9.5
32emb|BX571977.7| Zebrafish DNA sequence from clone DKEY-9E15, com... 40 9.5
33gb|AC157557.5| Mus musculus chromosome 7, clone RP24-369M22, com... 40 9.5
34emb|BX814493.1|CNS0AAR9 Arabidopsis thaliana Full-length cDNA Co... 40 9.5
35gb|AC097455.3| Homo sapiens BAC clone RP11-2J13 from 4, complete... 40 9.5
36gb|AC021199.7|AC021199 Arabidopsis thaliana chromosome 1 BAC F7F... 40 9.5
37gb|AY088050.1| Arabidopsis thaliana clone 40701 mRNA, complete s... 40 9.5
38emb|AL953894.5| Zebrafish DNA sequence from clone CH211-212B13 i... 40 9.5
39emb|AL845477.8| Mouse DNA sequence from clone RP23-206J10 on chr... 40 9.5 
>ref|XM_472545.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 873

 Score =  351 bits (177), Expect = 2e-93
 Identities = 420/501 (83%)
 Strand = Plus / Minus

                                                                       
Query: 177 tcagacagcagcatcctctttagtatcctccacaggctcctccgaagttgtggagctcgt 236
           ||||||||| ||||| |||||  ||||||||||||||| ||| | || || |||||||||
Sbjct: 873 tcagacagcggcatcttctttgctatcctccacaggcttctctgtagatggggagctcgt 814

                                                                       
Query: 237 gttttggtcaccagggccggtggagaccttcactgcggcaggccttagcaccctctccct 296
            |  |||   |||| |||||| ||||||||||| | |||||||||||||| |||||||||
Sbjct: 813 ctcctgggtgccagagccggttgagaccttcacagtggcaggccttagcagcctctccct 754

                                                                       
Query: 297 cagaaggaaccctcggtggacttcgtgtgagacgatccctgccttgaattctgtggattc 356
            ||||||||||| || | |||||| || ||||| ||||| |||||||| |     |||||
Sbjct: 753 tagaaggaacccgcgtttgacttcatgcgagacaatcccagccttgaactgatgagattc 694

                                                                       
Query: 357 ttcacgcgcgatagcctcatgaaccactggatcaaatggcttgccaacagtttccacaac 416
            || || |||||||||||||||| |   |||||||||||||||||||| |||||||||||
Sbjct: 693 ctcgcgtgcgatagcctcatgaatcgaaggatcaaatggcttgccaactgtttccacaac 634

                                                                       
Query: 417 ccctacacctaagcttttcagtgtttctactaattgcttgtatatgccttgatagcttgt 476
            ||||||||||||||| ||| ||| |||||||| ||||||||||||||||||||||||||
Sbjct: 633 tcctacacctaagcttctcaatgtctctactaactgcttgtatatgccttgatagcttgt 574

                                                                       
Query: 477 gctaatcttctgctctttctcagtctctagtgtgacctctacatttgttttctcgaagct 536
           ||||||| |||||||||| ||||||||  | |||| ||||  |||    ||||| || ||
Sbjct: 573 gctaatcgtctgctctttatcagtctccggggtgatctcttgattcaccttctcaaaact 514

                                                                       
Query: 537 atcaaccagaggtaacagactctgtacaagttccacttgtatattcgatgtaaactttgc 596
           |||||||||||  || |||||||| ||||  ||||| |||||||| || |||||| | ||
Sbjct: 513 atcaaccagagtcaatagactctgaacaacatccacctgtatatttgaggtaaacctagc 454

                                                                       
Query: 597 acggtccttttcagtctgcttccggaaattctctagatcagcatttaagcgaagaaactt 656
           ||| ||||||||||||||||||||||||||||| |||||||||||||  || || |||||
Sbjct: 453 acgctccttttcagtctgcttccggaaattctccagatcagcatttatacggaggaactt 394

                                
Query: 657 attcttccctgaagttatttc 677
            | |||||||||||| |||||
Sbjct: 393 gtccttccctgaagtaatttc 373
to top
>dbj|AK101973.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076N12, full
           insert sequence
          Length = 1180

 Score =  351 bits (177), Expect = 2e-93
 Identities = 420/501 (83%)
 Strand = Plus / Minus

                                                                       
Query: 177 tcagacagcagcatcctctttagtatcctccacaggctcctccgaagttgtggagctcgt 236
           ||||||||| ||||| |||||  ||||||||||||||| ||| | || || |||||||||
Sbjct: 971 tcagacagcggcatcttctttgctatcctccacaggcttctctgtagatggggagctcgt 912

                                                                       
Query: 237 gttttggtcaccagggccggtggagaccttcactgcggcaggccttagcaccctctccct 296
            |  |||   |||| |||||| ||||||||||| | |||||||||||||| |||||||||
Sbjct: 911 ctcctgggtgccagagccggttgagaccttcacagtggcaggccttagcagcctctccct 852

                                                                       
Query: 297 cagaaggaaccctcggtggacttcgtgtgagacgatccctgccttgaattctgtggattc 356
            ||||||||||| || | |||||| || ||||| ||||| |||||||| |     |||||
Sbjct: 851 tagaaggaacccgcgtttgacttcatgcgagacaatcccagccttgaactgatgagattc 792

                                                                       
Query: 357 ttcacgcgcgatagcctcatgaaccactggatcaaatggcttgccaacagtttccacaac 416
            || || |||||||||||||||| |   |||||||||||||||||||| |||||||||||
Sbjct: 791 ctcgcgtgcgatagcctcatgaatcgaaggatcaaatggcttgccaactgtttccacaac 732

                                                                       
Query: 417 ccctacacctaagcttttcagtgtttctactaattgcttgtatatgccttgatagcttgt 476
            ||||||||||||||| ||| ||| |||||||| ||||||||||||||||||||||||||
Sbjct: 731 tcctacacctaagcttctcaatgtctctactaactgcttgtatatgccttgatagcttgt 672

                                                                       
Query: 477 gctaatcttctgctctttctcagtctctagtgtgacctctacatttgttttctcgaagct 536
           ||||||| |||||||||| ||||||||  | |||| ||||  |||    ||||| || ||
Sbjct: 671 gctaatcgtctgctctttatcagtctccggggtgatctcttgattcaccttctcaaaact 612

                                                                       
Query: 537 atcaaccagaggtaacagactctgtacaagttccacttgtatattcgatgtaaactttgc 596
           |||||||||||  || |||||||| ||||  ||||| |||||||| || |||||| | ||
Sbjct: 611 atcaaccagagtcaatagactctgaacaacatccacctgtatatttgaggtaaacctagc 552

                                                                       
Query: 597 acggtccttttcagtctgcttccggaaattctctagatcagcatttaagcgaagaaactt 656
           ||| ||||||||||||||||||||||||||||| |||||||||||||  || || |||||
Sbjct: 551 acgctccttttcagtctgcttccggaaattctccagatcagcatttatacggaggaactt 492

                                
Query: 657 attcttccctgaagttatttc 677
            | |||||||||||| |||||
Sbjct: 491 gtccttccctgaagtaatttc 471



 Score = 48.1 bits (24), Expect = 0.039
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 125  gagctcccaaacaatggtgctctagcta 152
            ||||||||||| ||||||||||||||||
Sbjct: 1062 gagctcccaaagaatggtgctctagcta 1035
to top
>emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084A10,
             complete sequence
          Length = 144811

 Score =  264 bits (133), Expect = 4e-67
 Identities = 253/293 (86%)
 Strand = Plus / Plus

                                                                         
Query: 385   ggatcaaatggcttgccaacagtttccacaacccctacacctaagcttttcagtgtttct 444
             |||||||||||||||||||| ||||||||||| ||||||||||||||| ||| ||| |||
Sbjct: 36084 ggatcaaatggcttgccaactgtttccacaactcctacacctaagcttctcaatgtctct 36143

                                                                         
Query: 445   actaattgcttgtatatgccttgatagcttgtgctaatcttctgctctttctcagtctct 504
             ||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||| 
Sbjct: 36144 actaactgcttgtatatgccttgatagcttgtgctaatcgtctgctctttatcagtctcc 36203

                                                                         
Query: 505   agtgtgacctctacatttgttttctcgaagctatcaaccagaggtaacagactctgtaca 564
              | |||| ||||  |||    ||||| || |||||||||||||  || |||||||| |||
Sbjct: 36204 ggggtgatctcttgattcaccttctcaaaactatcaaccagagtcaatagactctgaaca 36263

                                                                         
Query: 565   agttccacttgtatattcgatgtaaactttgcacggtccttttcagtctgcttccggaaa 624
             |  ||||| |||||||| || |||||| | ||||| ||||||||||||||||||||||||
Sbjct: 36264 acatccacctgtatatttgaggtaaacctagcacgctccttttcagtctgcttccggaaa 36323

                                                                  
Query: 625   ttctctagatcagcatttaagcgaagaaacttattcttccctgaagttatttc 677
             ||||| |||||||||||||  || || ||||| | |||||||||||| |||||
Sbjct: 36324 ttctccagatcagcatttatacggaggaacttgtccttccctgaagtaatttc 36376



 Score =  111 bits (56), Expect = 3e-21
 Identities = 140/168 (83%)
 Strand = Plus / Plus

                                                                         
Query: 177   tcagacagcagcatcctctttagtatcctccacaggctcctccgaagttgtggagctcgt 236
             ||||||||| ||||| |||||  ||||||||||||||| ||| | || || |||||||||
Sbjct: 35644 tcagacagcggcatcttctttgctatcctccacaggcttctctgtagatggggagctcgt 35703

                                                                         
Query: 237   gttttggtcaccagggccggtggagaccttcactgcggcaggccttagcaccctctccct 296
              |  |||   |||| |||||| ||||||||||| | |||||||||||||| |||||||||
Sbjct: 35704 ctcctgggtgccagagccggttgagaccttcacagtggcaggccttagcagcctctccct 35763

                                                             
Query: 297   cagaaggaaccctcggtggacttcgtgtgagacgatccctgccttgaa 344
              ||||||||||| || | |||||| || ||||| ||||| ||||||||
Sbjct: 35764 tagaaggaacccgcgtttgacttcatgcgagacaatcccagccttgaa 35811



 Score = 48.1 bits (24), Expect = 0.039
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 125   gagctcccaaacaatggtgctctagcta 152
             ||||||||||| ||||||||||||||||
Sbjct: 35553 gagctcccaaagaatggtgctctagcta 35580
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  264 bits (133), Expect = 4e-67
 Identities = 253/293 (86%)
 Strand = Plus / Plus

                                                                            
Query: 385      ggatcaaatggcttgccaacagtttccacaacccctacacctaagcttttcagtgtttct 444
                |||||||||||||||||||| ||||||||||| ||||||||||||||| ||| ||| |||
Sbjct: 21386334 ggatcaaatggcttgccaactgtttccacaactcctacacctaagcttctcaatgtctct 21386393

                                                                            
Query: 445      actaattgcttgtatatgccttgatagcttgtgctaatcttctgctctttctcagtctct 504
                ||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||| 
Sbjct: 21386394 actaactgcttgtatatgccttgatagcttgtgctaatcgtctgctctttatcagtctcc 21386453

                                                                            
Query: 505      agtgtgacctctacatttgttttctcgaagctatcaaccagaggtaacagactctgtaca 564
                 | |||| ||||  |||    ||||| || |||||||||||||  || |||||||| |||
Sbjct: 21386454 ggggtgatctcttgattcaccttctcaaaactatcaaccagagtcaatagactctgaaca 21386513

                                                                            
Query: 565      agttccacttgtatattcgatgtaaactttgcacggtccttttcagtctgcttccggaaa 624
                |  ||||| |||||||| || |||||| | ||||| ||||||||||||||||||||||||
Sbjct: 21386514 acatccacctgtatatttgaggtaaacctagcacgctccttttcagtctgcttccggaaa 21386573

                                                                     
Query: 625      ttctctagatcagcatttaagcgaagaaacttattcttccctgaagttatttc 677
                ||||| |||||||||||||  || || ||||| | |||||||||||| |||||
Sbjct: 21386574 ttctccagatcagcatttatacggaggaacttgtccttccctgaagtaatttc 21386626



 Score =  111 bits (56), Expect = 3e-21
 Identities = 140/168 (83%)
 Strand = Plus / Plus

                                                                            
Query: 177      tcagacagcagcatcctctttagtatcctccacaggctcctccgaagttgtggagctcgt 236
                ||||||||| ||||| |||||  ||||||||||||||| ||| | || || |||||||||
Sbjct: 21385894 tcagacagcggcatcttctttgctatcctccacaggcttctctgtagatggggagctcgt 21385953

                                                                            
Query: 237      gttttggtcaccagggccggtggagaccttcactgcggcaggccttagcaccctctccct 296
                 |  |||   |||| |||||| ||||||||||| | |||||||||||||| |||||||||
Sbjct: 21385954 ctcctgggtgccagagccggttgagaccttcacagtggcaggccttagcagcctctccct 21386013

                                                                
Query: 297      cagaaggaaccctcggtggacttcgtgtgagacgatccctgccttgaa 344
                 ||||||||||| || | |||||| || ||||| ||||| ||||||||
Sbjct: 21386014 tagaaggaacccgcgtttgacttcatgcgagacaatcccagccttgaa 21386061



 Score = 48.1 bits (24), Expect = 0.039
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 125      gagctcccaaacaatggtgctctagcta 152
                ||||||||||| ||||||||||||||||
Sbjct: 21385803 gagctcccaaagaatggtgctctagcta 21385830
to top
>gb|AY110636.1| Zea mays CL4177_1 mRNA sequence
          Length = 1088

 Score =  264 bits (133), Expect = 4e-67
 Identities = 253/293 (86%)
 Strand = Plus / Minus

                                                                       
Query: 385 ggatcaaatggcttgccaacagtttccacaacccctacacctaagcttttcagtgtttct 444
           |||||||||||||||||||| ||||||||| |  | ||||| ||   | | |||||||| 
Sbjct: 683 ggatcaaatggcttgccaactgtttccacagcttccacacccaaatatcttagtgtttca 624

                                                                       
Query: 445 actaattgcttgtatatgccttgatagcttgtgctaatcttctgctctttctcagtctct 504
           ||||| ||||||||||||||||||||||||| ||| ||||| ||||| ||||||||||||
Sbjct: 623 actaactgcttgtatatgccttgatagcttgcgctgatcttttgctccttctcagtctct 564

                                                                       
Query: 505 agtgtgacctctacatttgttttctcgaagctatcaaccagaggtaacagactctgtaca 564
            | |||  ||||| |||| ||||||| || |||||||| ||||||||||||||||| |||
Sbjct: 563 ggggtgttctctagatttattttctcaaaactatcaactagaggtaacagactctgaaca 504

                                                                       
Query: 565 agttccacttgtatattcgatgtaaactttgcacggtccttttcagtctgcttccggaaa 624
           | ||||||  ||||||| ||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 503 acttccacccgtatatttgatgttaactttgcacggtccttttcagtctgtttccggaaa 444

                                                                
Query: 625 ttctctagatcagcatttaagcgaagaaacttattcttccctgaagttatttc 677
           ||||| || || ||||||||||||| |||||| | |||||| |||||||||||
Sbjct: 443 ttctccaggtcggcatttaagcgaataaacttttccttcccagaagttatttc 391



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                       
Query: 259 gagaccttcactgcggcaggccttagcaccctctccctcagaaggaaccctcggtggact 318
           ||||||||||| |  ||||||||||||| ||||||| ||| | ||||||||| | |||||
Sbjct: 809 gagaccttcacagtagcaggccttagcagcctctccttcaaatggaaccctctgcggact 750

            
Query: 319 t 319
           |
Sbjct: 749 t 749
to top
>dbj|AK105181.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-G08, full
           insert sequence
          Length = 375

 Score =  107 bits (54), Expect = 5e-20
 Identities = 138/166 (83%)
 Strand = Plus / Minus

                                                                       
Query: 177 tcagacagcagcatcctctttagtatcctccacaggctcctccgaagttgtggagctcgt 236
           ||||||||| ||||| |||||  ||||||||||||||| ||| | || || |||||||||
Sbjct: 166 tcagacagcggcatcttctttgctatcctccacaggcttctctgtagatggggagctcgt 107

                                                                       
Query: 237 gttttggtcaccagggccggtggagaccttcactgcggcaggccttagcaccctctccct 296
            |  |||   |||| |||||| ||||||||||| | |||||||||||||| |||||||||
Sbjct: 106 ctcctgggtgccagagccggttgagaccttcacagtggcaggccttagcagcctctccct 47

                                                         
Query: 297 cagaaggaaccctcggtggacttcgtgtgagacgatccctgccttg 342
            ||||||||||| || | |||||| || ||||| ||||| ||||||
Sbjct: 46  tagaaggaacccgcgtttgacttcatgcgagacaatcccagccttg 1



 Score = 48.1 bits (24), Expect = 0.039
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 125 gagctcccaaacaatggtgctctagcta 152
           ||||||||||| ||||||||||||||||
Sbjct: 257 gagctcccaaagaatggtgctctagcta 230
to top
>ref|XM_466685.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 999

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 367 atagcctcatgaaccactggatcaaatggcttgccaacagtttccaca 414
           ||||||||||||| ||  ||||||||||| ||||||||||| ||||||
Sbjct: 770 atagcctcatgaagcataggatcaaatggtttgccaacagtctccaca 723
to top
>gb|AC146272.3| Pan troglodytes BAC clone RP43-29H6 from 7, complete sequence
          Length = 149408

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 120   aaacagagctcccaaacaatgg 141
             ||||||||||||||||||||||
Sbjct: 70767 aaacagagctcccaaacaatgg 70746
to top
>gb|AC142352.1| Pan troglodytes BAC clone RP43-21K18 from 7, complete sequence
          Length = 171165

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 120   aaacagagctcccaaacaatgg 141
             ||||||||||||||||||||||
Sbjct: 93183 aaacagagctcccaaacaatgg 93162
to top
>gb|AC087069.3| Homo sapiens chromosome 7 clone RP11-7P19, complete sequence
          Length = 159620

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 120   aaacagagctcccaaacaatgg 141
             ||||||||||||||||||||||
Sbjct: 77391 aaacagagctcccaaacaatgg 77370
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 385      ggatcaaatggcttgccaacagtttccaca 414
                ||||||||||| ||||||||||| ||||||
Sbjct: 24112846 ggatcaaatggtttgccaacagtctccaca 24112817
to top
>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1004_A05
          Length = 174290

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 385   ggatcaaatggcttgccaacagtttccaca 414
             ||||||||||| ||||||||||| ||||||
Sbjct: 71587 ggatcaaatggtttgccaacagtctccaca 71558
to top
>gb|AY105803.1| Zea mays PCO143734 mRNA sequence
          Length = 1421

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 385 ggatcaaatggcttgccaacagtttc 410
           ||||||||||| ||||||||||||||
Sbjct: 858 ggatcaaatggtttgccaacagtttc 833
to top
>gb|AC138381.10| Mus musculus chromosome 6, clone RP24-328J8, complete sequence
          Length = 130895

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 428    agcttttcagtgtttctacta 448
              |||||||||||||||||||||
Sbjct: 101661 agcttttcagtgtttctacta 101641
to top
>emb|AL354829.8| Human DNA sequence from clone RP11-218B22 on chromosome 13 Contains the
              3' end of the DIAPH3 gene for diaphanous homolog 3
              (Drosophila), complete sequence
          Length = 154212

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 655    ttattcttccctgaagttatt 675
              |||||||||||||||||||||
Sbjct: 114457 ttattcttccctgaagttatt 114477
to top
>gb|AC109296.16| Mus musculus chromosome 1, clone RP24-240J15, complete sequence
          Length = 161257

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 397    ttgccaacagtttccacaacccct 420
              ||||||||||| ||||||||||||
Sbjct: 143021 ttgccaacagtctccacaacccct 142998
to top
>gb|AC121143.12| Mus musculus chromosome 1, clone RP24-177B16, complete sequence
          Length = 176008

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 397   ttgccaacagtttccacaacccct 420
             ||||||||||| ||||||||||||
Sbjct: 29381 ttgccaacagtctccacaacccct 29358
to top
>ref|NM_103325.1| Arabidopsis thaliana adenyl-nucleotide exchange factor/ chaperone
           binding / protein homodimerization AT1G36390 transcript
           variant AT1G36390.1 mRNA, complete cds
          Length = 1027

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 385 ggatcaaatggcttgccaacagtt 408
           |||||||| |||||||||||||||
Sbjct: 700 ggatcaaaaggcttgccaacagtt 677
to top
>ref|NM_179420.1| Arabidopsis thaliana adenyl-nucleotide exchange factor/ chaperone
           binding / protein homodimerization AT1G36390 transcript
           variant AT1G36390.2 mRNA, complete cds
          Length = 1101

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 385 ggatcaaatggcttgccaacagtt 408
           |||||||| |||||||||||||||
Sbjct: 699 ggatcaaaaggcttgccaacagtt 676
to top
>gb|AC163295.2| Mus musculus BAC clone RP23-132K20 from chromosome 14, complete
             sequence
          Length = 212576

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 411   cacaacccctacacctaagc 430
             ||||||||||||||||||||
Sbjct: 62559 cacaacccctacacctaagc 62578
to top
>gb|AC125331.4| Mus musculus chromosome 7 clone RP23-11L1, complete sequence
          Length = 255921

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 72     aaagggacccatttaaaatc 91
              ||||||||||||||||||||
Sbjct: 116560 aaagggacccatttaaaatc 116541
to top
>gb|AC122802.2| Mus musculus BAC clone RP24-136N24 from 6, complete sequence
          Length = 185938

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 376   tgaaccactggatcaaatgg 395
             ||||||||||||||||||||
Sbjct: 91829 tgaaccactggatcaaatgg 91848
to top
>emb|BX957326.8| Zebrafish DNA sequence from clone DKEY-31B16 in linkage group 23,
              complete sequence
          Length = 259092

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 107    atattaacagtacaaacaga 126
              ||||||||||||||||||||
Sbjct: 159589 atattaacagtacaaacaga 159608
to top
>emb|Z93928.1|HS127B14 Human DNA sequence from clone RP1-127B14 on chromosome Xq22, complete
             sequence
          Length = 126263

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 283   agcaccctctccctcagaaggaac 306
             ||||||||||| ||||||||||||
Sbjct: 32436 agcaccctctctctcagaaggaac 32459
to top
>emb|Z82189.1|HS170A21 Human DNA sequence from clone RP1-170A21 on chromosome 22, complete
             sequence
          Length = 176947

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   cctccacaggctcctccgaa 222
             ||||||||||||||||||||
Sbjct: 11528 cctccacaggctcctccgaa 11547
to top
>emb|AL732327.6| Human DNA sequence from clone RP11-387P24 on chromosome X Contains part
             of the SH3KBP1 gene for SH3-domain kinase binding protein
             1 (CIN85), complete sequence
          Length = 190325

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 656   tattcttccctgaagttatttcag 679
             |||||| |||||||||||||||||
Sbjct: 44308 tattctcccctgaagttatttcag 44285
to top
>gb|AE014818.1| Plasmodium falciparum 3D7 chromosome 14 section 3 of 13 of the complete
              sequence
          Length = 252632

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 444    tactaattgcttgtatatgc 463
              ||||||||||||||||||||
Sbjct: 141316 tactaattgcttgtatatgc 141335
to top
>gb|AY117176.1| Arabidopsis thaliana putative heat shock protein (At1g36390) mRNA,
           complete cds
          Length = 871

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 385 ggatcaaatggcttgccaacagtt 408
           |||||||| |||||||||||||||
Sbjct: 653 ggatcaaaaggcttgccaacagtt 630
to top
>gb|AY065397.1| Arabidopsis thaliana putative heat shock protein (At1g36390) mRNA,
           complete cds
          Length = 1024

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 385 ggatcaaatggcttgccaacagtt 408
           |||||||| |||||||||||||||
Sbjct: 702 ggatcaaaaggcttgccaacagtt 679
to top
>gb|AC005013.3| Homo sapiens BAC clone GS1-165L15 from 7, complete sequence
          Length = 195917

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 283   agcaccctctccctcagaag 302
             ||||||||||||||||||||
Sbjct: 85400 agcaccctctccctcagaag 85381
to top
>gb|AC090009.9| Homo sapiens 12 BAC RP11-724J16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 53631

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 654   cttattcttccctgaagttatttc 677
             |||||| |||||||||||||||||
Sbjct: 27400 cttatttttccctgaagttatttc 27377
to top
>emb|BX571977.7| Zebrafish DNA sequence from clone DKEY-9E15, complete sequence
          Length = 82992

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   atattaacagtacaaacaga 126
             ||||||||||||||||||||
Sbjct: 77652 atattaacagtacaaacaga 77671
to top
>gb|AC157557.5| Mus musculus chromosome 7, clone RP24-369M22, complete sequence
          Length = 202543

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 473    ttgtgctaatcttctgctctttctcagtctct 504
              |||| |||||||||||||| |||||| |||||
Sbjct: 189293 ttgttctaatcttctgctccttctcattctct 189324
to top
>emb|BX814493.1|CNS0AAR9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB77ZA09 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 988

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 385 ggatcaaatggcttgccaacagtt 408
           |||||||| |||||||||||||||
Sbjct: 685 ggatcaaaaggcttgccaacagtt 662
to top
>gb|AC097455.3| Homo sapiens BAC clone RP11-2J13 from 4, complete sequence
          Length = 147327

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 496   tcagtctctagtgtgacctctacatttgtttt 527
             |||||||||| ||  |||||||||||||||||
Sbjct: 73739 tcagtctctaatgaaacctctacatttgtttt 73708
to top
>gb|AC021199.7|AC021199 Arabidopsis thaliana chromosome 1 BAC F7F23 genomic sequence, complete
             sequence
          Length = 73252

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 385   ggatcaaatggcttgccaacagtt 408
             |||||||| |||||||||||||||
Sbjct: 53874 ggatcaaaaggcttgccaacagtt 53897
to top
>gb|AY088050.1| Arabidopsis thaliana clone 40701 mRNA, complete sequence
          Length = 1027

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 385 ggatcaaatggcttgccaacagtt 408
           |||||||| |||||||||||||||
Sbjct: 700 ggatcaaaaggcttgccaacagtt 677
to top
>emb|AL953894.5| Zebrafish DNA sequence from clone CH211-212B13 in linkage group 18,
              complete sequence
          Length = 222376

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 463    ccttgatagcttgtgctaatcttc 486
              |||||| |||||||||||||||||
Sbjct: 157635 ccttgaaagcttgtgctaatcttc 157658
to top
>emb|AL845477.8| Mouse DNA sequence from clone RP23-206J10 on chromosome 2, complete
             sequence
          Length = 103901

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 552   cagactctgtacaagttccacttg 575
             |||||||| |||||||||||||||
Sbjct: 48983 cagactctttacaagttccacttg 49006


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,944,269
Number of Sequences: 3902068
Number of extensions: 5944269
Number of successful extensions: 111206
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 111068
Number of HSP's gapped (non-prelim): 133
length of query: 693
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 670
effective length of database: 17,143,297,704
effective search space: 11486009461680
effective search space used: 11486009461680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top