ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags30p02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_190764.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1995 Score = 230 bits (116), Expect = 5e-57 Identities = 302/364 (82%) Strand = Plus / Minus Query: 329 aagcgctgagatgtggatgatcttggtcggagcacagcaatggcggtagttcttcgccac 388 |||||||||||||||||| |||||||| || || || || ||||||||||||||| |||| Sbjct: 1782 aagcgctgagatgtggatcatcttggttggggcgcaacagtggcggtagttcttcaccac 1723 Query: 389 attactgttgaaccggttaaggttggaggttgagtagtcatgtgcatcaggagcaggggt 448 ||| ||||| || | ||| |||| || |||||||||||| ||||||| ||| ||| || Sbjct: 1722 attgctgttaaatctgttgaggtgagaagttgagtagtcacgtgcatctggatcagcagt 1663 Query: 449 aatactcgggtacttagagaagttcacttccagtttctgcccaagtaacattgctccctt 508 || | |||||||| ||| |||||||||| || |||| || | || |||||||||||| Sbjct: 1662 aacggttgggtacttggagtagttcacttcaagcttctttccgaatagcattgctccctt 1603 Query: 509 taaatagtgtatagcaagctcggtctgaagcccatcagccatctggacgagggcatggtc 568 |||||| ||| ||||||||| | ||||||||| ||||||||||||| ||||||||| || Sbjct: 1602 taaatacagtacagcaagctcagcctgaagcccgtcagccatctggatgagggcatgatc 1543 Query: 569 tggtttattgcggagtaccttgattctcactatatttccataaatagaaaatagattgaa 628 ||||||||| ||||| |||||| | ||| ||||| ||||| || || || || ||||| Sbjct: 1542 tggtttatttttgagtatcttgatacgcacgatattcccatacattgagaaaaggttgaa 1483 Query: 629 cagcttatccgcatcgattttatcactgttcaaattgctaactataagtgtgcagcgatc 688 ||||||||| |||| ||||||||| |||||| ||||||||||| ||||||||| || || Sbjct: 1482 gagcttatcctcatcaattttatcagtgttcagattgctaactagaagtgtgcaacggtc 1423 Query: 689 attg 692 |||| Sbjct: 1422 attg 1419 Score = 58.0 bits (29), Expect = 4e-05 Identities = 137/173 (79%) Strand = Plus / Minus Query: 116 ctatatgttctgcatctgggagaaagaaatcctaatggtggatccctcgagcttgctcgc 175 |||||| ||||||||||| ||||| |||||||| ||| ||| || || |||||||| || Sbjct: 1995 ctatatattctgcatctgtgagaaggaaatcctgatgttggttcggtccagcttgcttgc 1936 Query: 176 atgcttacagaccagagcttcggtcgcctcttcctcgctctcgaactgcacgagagcctg 235 ||||| || || || || || ||||||||| |||| || ||| |||| || ||||| Sbjct: 1935 gtgcttctccacgagcgcctctgttgcctcttccacgctttcaaacagcacaagggcctg 1876 Query: 236 cgtcttgccgctcgcctcaaacagctttgacttgacgatggtgccatgctcac 288 ||| |||||| ||| ||| ||||| |||| ||| |||| || |||||||||| Sbjct: 1875 cgttttgccgttcgtctcgaacagtcttgagttggcgatagtcccatgctcac 1823
>dbj|AK069062.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023006N01, full insert sequence Length = 1760 Score = 230 bits (116), Expect = 5e-57 Identities = 302/364 (82%) Strand = Plus / Minus Query: 329 aagcgctgagatgtggatgatcttggtcggagcacagcaatggcggtagttcttcgccac 388 |||||||||||||||||| |||||||| || || || || ||||||||||||||| |||| Sbjct: 1262 aagcgctgagatgtggatcatcttggttggggcgcaacagtggcggtagttcttcaccac 1203 Query: 389 attactgttgaaccggttaaggttggaggttgagtagtcatgtgcatcaggagcaggggt 448 ||| ||||| || | ||| |||| || |||||||||||| ||||||| ||| ||| || Sbjct: 1202 attgctgttaaatctgttgaggtgagaagttgagtagtcacgtgcatctggatcagcagt 1143 Query: 449 aatactcgggtacttagagaagttcacttccagtttctgcccaagtaacattgctccctt 508 || | |||||||| ||| |||||||||| || |||| || | || |||||||||||| Sbjct: 1142 aacggttgggtacttggagtagttcacttcaagcttctttccgaatagcattgctccctt 1083 Query: 509 taaatagtgtatagcaagctcggtctgaagcccatcagccatctggacgagggcatggtc 568 |||||| ||| ||||||||| | ||||||||| ||||||||||||| ||||||||| || Sbjct: 1082 taaatacagtacagcaagctcagcctgaagcccgtcagccatctggatgagggcatgatc 1023 Query: 569 tggtttattgcggagtaccttgattctcactatatttccataaatagaaaatagattgaa 628 ||||||||| ||||| |||||| | ||| ||||| ||||| || || || || ||||| Sbjct: 1022 tggtttatttttgagtatcttgatacgcacgatattcccatacattgagaaaaggttgaa 963 Query: 629 cagcttatccgcatcgattttatcactgttcaaattgctaactataagtgtgcagcgatc 688 ||||||||| |||| ||||||||| |||||| ||||||||||| ||||||||| || || Sbjct: 962 gagcttatcctcatcaattttatcagtgttcagattgctaactagaagtgtgcaacggtc 903 Query: 689 attg 692 |||| Sbjct: 902 attg 899 Score = 58.0 bits (29), Expect = 4e-05 Identities = 137/173 (79%) Strand = Plus / Minus Query: 116 ctatatgttctgcatctgggagaaagaaatcctaatggtggatccctcgagcttgctcgc 175 |||||| ||||||||||| ||||| |||||||| ||| ||| || || |||||||| || Sbjct: 1475 ctatatattctgcatctgtgagaaggaaatcctgatgttggttcggtccagcttgcttgc 1416 Query: 176 atgcttacagaccagagcttcggtcgcctcttcctcgctctcgaactgcacgagagcctg 235 ||||| || || || || || ||||||||| |||| || ||| |||| || ||||| Sbjct: 1415 gtgcttctccacgagcgcctctgttgcctcttccacgctttcaaacagcacaagggcctg 1356 Query: 236 cgtcttgccgctcgcctcaaacagctttgacttgacgatggtgccatgctcac 288 ||| |||||| ||| ||| ||||| |||| ||| |||| || |||||||||| Sbjct: 1355 cgttttgccgttcgtctcgaacagtcttgagttggcgatagtcccatgctcac 1303
>dbj|AK066622.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013070J15, full insert sequence Length = 1641 Score = 230 bits (116), Expect = 5e-57 Identities = 302/364 (82%) Strand = Plus / Minus Query: 329 aagcgctgagatgtggatgatcttggtcggagcacagcaatggcggtagttcttcgccac 388 |||||||||||||||||| |||||||| || || || || ||||||||||||||| |||| Sbjct: 1143 aagcgctgagatgtggatcatcttggttggggcgcaacagtggcggtagttcttcaccac 1084 Query: 389 attactgttgaaccggttaaggttggaggttgagtagtcatgtgcatcaggagcaggggt 448 ||| ||||| || | ||| |||| || |||||||||||| ||||||| ||| ||| || Sbjct: 1083 attgctgttaaatctgttgaggtgagaagttgagtagtcacgtgcatctggatcagcagt 1024 Query: 449 aatactcgggtacttagagaagttcacttccagtttctgcccaagtaacattgctccctt 508 || | |||||||| ||| |||||||||| || |||| || | || |||||||||||| Sbjct: 1023 aacggttgggtacttggagtagttcacttcaagcttctttccgaatagcattgctccctt 964 Query: 509 taaatagtgtatagcaagctcggtctgaagcccatcagccatctggacgagggcatggtc 568 |||||| ||| ||||||||| | ||||||||| ||||||||||||| ||||||||| || Sbjct: 963 taaatacagtacagcaagctcagcctgaagcccgtcagccatctggatgagggcatgatc 904 Query: 569 tggtttattgcggagtaccttgattctcactatatttccataaatagaaaatagattgaa 628 ||||||||| ||||| |||||| | ||| ||||| ||||| || || || || ||||| Sbjct: 903 tggtttatttttgagtatcttgatacgcacgatattcccatacattgagaaaaggttgaa 844 Query: 629 cagcttatccgcatcgattttatcactgttcaaattgctaactataagtgtgcagcgatc 688 ||||||||| |||| ||||||||| |||||| ||||||||||| ||||||||| || || Sbjct: 843 gagcttatcctcatcaattttatcagtgttcagattgctaactagaagtgtgcaacggtc 784 Query: 689 attg 692 |||| Sbjct: 783 attg 780 Score = 58.0 bits (29), Expect = 4e-05 Identities = 137/173 (79%) Strand = Plus / Minus Query: 116 ctatatgttctgcatctgggagaaagaaatcctaatggtggatccctcgagcttgctcgc 175 |||||| ||||||||||| ||||| |||||||| ||| ||| || || |||||||| || Sbjct: 1356 ctatatattctgcatctgtgagaaggaaatcctgatgttggttcggtccagcttgcttgc 1297 Query: 176 atgcttacagaccagagcttcggtcgcctcttcctcgctctcgaactgcacgagagcctg 235 ||||| || || || || || ||||||||| |||| || ||| |||| || ||||| Sbjct: 1296 gtgcttctccacgagcgcctctgttgcctcttccacgctttcaaacagcacaagggcctg 1237 Query: 236 cgtcttgccgctcgcctcaaacagctttgacttgacgatggtgccatgctcac 288 ||| |||||| ||| ||| ||||| |||| ||| |||| || |||||||||| Sbjct: 1236 cgttttgccgttcgtctcgaacagtcttgagttggcgatagtcccatgctcac 1184
>dbj|AK062260.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-G12, full insert sequence Length = 1088 Score = 222 bits (112), Expect = 1e-54 Identities = 301/364 (82%) Strand = Plus / Minus Query: 329 aagcgctgagatgtggatgatcttggtcggagcacagcaatggcggtagttcttcgccac 388 |||||||||||||||||| |||||||| || || || || ||||||||||||||| |||| Sbjct: 720 aagcgctgagatgtggatcatcttggttggggcgcaacagtggcggtagttcttcaccac 661 Query: 389 attactgttgaaccggttaaggttggaggttgagtagtcatgtgcatcaggagcaggggt 448 ||| |||| || | ||| |||| || |||||||||||| ||||||| ||| ||| || Sbjct: 660 attgctgtcaaatctgttgaggtgagaagttgagtagtcacgtgcatctggatcagcagt 601 Query: 449 aatactcgggtacttagagaagttcacttccagtttctgcccaagtaacattgctccctt 508 || | |||||||| ||| |||||||||| || |||| || | || |||||||||||| Sbjct: 600 aacggttgggtacttggagtagttcacttcaagcttctttccgaatagcattgctccctt 541 Query: 509 taaatagtgtatagcaagctcggtctgaagcccatcagccatctggacgagggcatggtc 568 |||||| ||| ||||||||| | ||||||||| ||||||||||||| ||||||||| || Sbjct: 540 taaatacagtacagcaagctcagcctgaagcccgtcagccatctggatgagggcatgatc 481 Query: 569 tggtttattgcggagtaccttgattctcactatatttccataaatagaaaatagattgaa 628 ||||||||| ||||| |||||| | ||| ||||| ||||| || || || || ||||| Sbjct: 480 tggtttatttttgagtatcttgatacgcacgatattcccatacattgagaaaaggttgaa 421 Query: 629 cagcttatccgcatcgattttatcactgttcaaattgctaactataagtgtgcagcgatc 688 ||||||||| |||| ||||||||| |||||| ||||||||||| ||||||||| || || Sbjct: 420 gagcttatcctcatcaattttatcagtgttcagattgctaactagaagtgtgcaacggtc 361 Query: 689 attg 692 |||| Sbjct: 360 attg 357 Score = 58.0 bits (29), Expect = 4e-05 Identities = 137/173 (79%) Strand = Plus / Minus Query: 116 ctatatgttctgcatctgggagaaagaaatcctaatggtggatccctcgagcttgctcgc 175 |||||| ||||||||||| ||||| |||||||| ||| ||| || || |||||||| || Sbjct: 933 ctatatattctgcatctgtgagaaggaaatcctgatgttggttcggtccagcttgcttgc 874 Query: 176 atgcttacagaccagagcttcggtcgcctcttcctcgctctcgaactgcacgagagcctg 235 ||||| || || || || || ||||||||| |||| || ||| |||| || ||||| Sbjct: 873 gtgcttctccacgagcgcctctgttgcctcttccacgctttcaaacagcacaagggcctg 814 Query: 236 cgtcttgccgctcgcctcaaacagctttgacttgacgatggtgccatgctcac 288 ||| |||||| ||| ||| ||||| |||| ||| |||| || |||||||||| Sbjct: 813 cgttttgccgttcgtctcgaacagtcttgagttggcgatagtcccatgctcac 761
>gb|AY105722.1| Zea mays PCO067271 mRNA sequence Length = 1012 Score = 139 bits (70), Expect = 1e-29 Identities = 287/360 (79%) Strand = Plus / Minus Query: 339 atgtggatgatcttggtcggagcacagcaatggcggtagttcttcgccacattactgttg 398 |||||||| ||||| || |||| |||||||| ||||||||||| |||| || |||||| Sbjct: 493 atgtggatcatcttcgttggagagcagcaatgtcggtagttcttgaccacgttgctgttg 434 Query: 399 aaccggttaaggttggaggttgagtagtcatgtgcatcaggagcaggggtaatactcggg 458 |||||||| | | | ||| || ||||||| || || ||||||||||| || || | || Sbjct: 433 aaccggtttatgcttgagtttaagtagtcgtgggcgtcaggagcaggtgtgatgttagga 374 Query: 459 tacttagagaagttcacttccagtttctgcccaagtaacattgctccctttaaatagtgt 518 ||||| ||| |||| ||||||||||||| ||||| || || | ||||| ||||| || Sbjct: 373 tactttgagtagttaacttccagtttcttcccaaatagtatagaccccttcaaataatgc 314 Query: 519 atagcaagctcggtctgaagcccatcagccatctggacgagggcatggtctggtttattg 578 | ||| ||||| | ||| | |||||||||||||| || || ||||| |||||||| || Sbjct: 313 acagctagctctgcctgcaacccatcagccatctcaacaagtgcatgatctggtttgtta 254 Query: 579 cggagtaccttgattctcactatatttccataaatagaaaatagattgaacagcttatcc 638 || |||| |||||||| ||||| |||||||| | |||| |||||||| ||||||||| Sbjct: 253 cgcagtatcttgattcgtactatgtttccatacanggaaancagattgaaaagcttatcc 194 Query: 639 gcatcgattttatcactgttcaaattgctaactataagtgtgcagcgatcattggtacca 698 |||| ||||||||| | |||| ||| || || || |||||||| || |||||||||||| Sbjct: 193 tcatcaattttatcagtattcagattactgacgatgagtgtgcaccgttcattggtacca 134 Score = 58.0 bits (29), Expect = 4e-05 Identities = 98/121 (80%) Strand = Plus / Minus Query: 124 tctgcatctgggagaaagaaatcctaatggtggatccctcgagcttgctcgcatgcttac 183 ||||||||||||||||||| |||| || ||| ||||||||| |||| |||||||| Sbjct: 709 tctgcatctgggagaaagagatccggatcgtgttaccctcgagcgtgctggcatgctttg 650 Query: 184 agaccagagcttcggtcgcctcttcctcgctctcgaactgcacgagagcctgcgtcttgc 243 | || || || ||||| ||||| || |||||||||||| | |||||||||| |||||| Sbjct: 649 acacgagggcctcggtagcctcctcttcgctctcgaacaaaatgagagcctgcctcttgc 590 Query: 244 c 244 | Sbjct: 589 c 589
>gb|BT019146.1| Zea mays clone Contig801.F mRNA sequence Length = 1086 Score = 133 bits (67), Expect = 9e-28 Identities = 289/363 (79%) Strand = Plus / Minus Query: 336 gagatgtggatgatcttggtcggagcacagcaatggcggtagttcttcgccacattactg 395 ||||||||||| ||||| || |||| |||||||| |||||||| || ||| || ||| Sbjct: 546 gagatgtggatcatctttgttggagagcagcaatgtcggtagttttttaccatgttgctg 487 Query: 396 ttgaaccggttaaggttggaggttgagtagtcatgtgcatcaggagcaggggtaatactc 455 ||||| ||||| ||| | ||| | ||||||| || || || || ||||| ||||| | Sbjct: 486 ttgaatcggtttaggctcgagttcaagtagtcgtgggcgtctggggcaggtgtaatgtta 427 Query: 456 gggtacttagagaagttcacttccagtttctgcccaagtaacattgctccctttaaatag 515 |||||||| ||| |||| |||||||| |||| ||||| || || || ||||| ||||| Sbjct: 426 gggtactttgagtagttaacttccagcttcttcccaaatagtatagcccccttcaaataa 367 Query: 516 tgtatagcaagctcggtctgaagcccatcagccatctggacgagggcatggtctggttta 575 || | ||| ||||| | ||| | ||| |||||||||| || |||||||| ||||||||| Sbjct: 366 tgcacagctagctcagcctgcaacccgtcagccatctcaacaagggcatgatctggttta 307 Query: 576 ttgcggagtaccttgattctcactatatttccataaatagaaaatagattgaacagctta 635 || || ||||||||||| | ||||| ||||| || | ||||| |||||||| |||||| Sbjct: 306 ttacgcagtaccttgatacgaactatgtttccgtacaaggaaaacagattgaagagctta 247 Query: 636 tccgcatcgattttatcactgttcaaattgctaactataagtgtgcagcgatcattggta 695 ||| |||| ||||||||| | |||| ||| || ||||| |||||||| || ||||||||| Sbjct: 246 tcctcatcaattttatcattattcagattactgactatgagtgtgcaccgttcattggta 187 Query: 696 cca 698 ||| Sbjct: 186 cca 184
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 97.6 bits (49), Expect = 5e-17 Identities = 121/145 (83%) Strand = Plus / Minus Query: 505 cctttaaatagtgtatagcaagctcggtctgaagcccatcagccatctggacgagggcat 564 |||||||||| ||| ||||||||| | ||||||||| ||||||||||||| |||||||| Sbjct: 37577273 cctttaaatacagtacagcaagctcagcctgaagcccgtcagccatctggatgagggcat 37577214 Query: 565 ggtctggtttattgcggagtaccttgattctcactatatttccataaatagaaaatagat 624 | ||||||||||| ||||| |||||| | ||| ||||| ||||| || || || || | Sbjct: 37577213 gatctggtttatttttgagtatcttgatacgcacgatattcccatacattgagaaaaggt 37577154 Query: 625 tgaacagcttatccgcatcgatttt 649 |||| ||||||||| |||| ||||| Sbjct: 37577153 tgaagagcttatcctcatcaatttt 37577129 Score = 93.7 bits (47), Expect = 7e-16 Identities = 146/179 (81%) Strand = Plus / Minus Query: 329 aagcgctgagatgtggatgatcttggtcggagcacagcaatggcggtagttcttcgccac 388 |||||||||||||||||| |||||||| || || || || ||||||||||||||| |||| Sbjct: 37577597 aagcgctgagatgtggatcatcttggttggggcgcaacagtggcggtagttcttcaccac 37577538 Query: 389 attactgttgaaccggttaaggttggaggttgagtagtcatgtgcatcaggagcaggggt 448 ||| ||||| || | ||| |||| || |||||||||||| ||||||| ||| ||| || Sbjct: 37577537 attgctgttaaatctgttgaggtgagaagttgagtagtcacgtgcatctggatcagcagt 37577478 Query: 449 aatactcgggtacttagagaagttcacttccagtttctgcccaagtaacattgctccct 507 || | |||||||| ||| |||||||||| || |||| || | || ||||||||||| Sbjct: 37577477 aacggttgggtacttggagtagttcacttcaagcttctttccgaatagcattgctccct 37577419 Score = 58.0 bits (29), Expect = 4e-05 Identities = 137/173 (79%) Strand = Plus / Minus Query: 116 ctatatgttctgcatctgggagaaagaaatcctaatggtggatccctcgagcttgctcgc 175 |||||| ||||||||||| ||||| |||||||| ||| ||| || || |||||||| || Sbjct: 37577810 ctatatattctgcatctgtgagaaggaaatcctgatgttggttcggtccagcttgcttgc 37577751 Query: 176 atgcttacagaccagagcttcggtcgcctcttcctcgctctcgaactgcacgagagcctg 235 ||||| || || || || || ||||||||| |||| || ||| |||| || ||||| Sbjct: 37577750 gtgcttctccacgagcgcctctgttgcctcttccacgctttcaaacagcacaagggcctg 37577691 Query: 236 cgtcttgccgctcgcctcaaacagctttgacttgacgatggtgccatgctcac 288 ||| |||||| ||| ||| ||||| |||| ||| |||| || |||||||||| Sbjct: 37577690 cgttttgccgttcgtctcgaacagtcttgagttggcgatagtcccatgctcac 37577638 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Minus Query: 650 atcactgttcaaattgctaactataagtgtgcagcgatcattg 692 |||| |||||| ||||||||||| ||||||||| || |||||| Sbjct: 37577049 atcagtgttcagattgctaactagaagtgtgcaacggtcattg 37577007
>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0677H08 Length = 178830 Score = 97.6 bits (49), Expect = 5e-17 Identities = 121/145 (83%) Strand = Plus / Minus Query: 505 cctttaaatagtgtatagcaagctcggtctgaagcccatcagccatctggacgagggcat 564 |||||||||| ||| ||||||||| | ||||||||| ||||||||||||| |||||||| Sbjct: 37747 cctttaaatacagtacagcaagctcagcctgaagcccgtcagccatctggatgagggcat 37688 Query: 565 ggtctggtttattgcggagtaccttgattctcactatatttccataaatagaaaatagat 624 | ||||||||||| ||||| |||||| | ||| ||||| ||||| || || || || | Sbjct: 37687 gatctggtttatttttgagtatcttgatacgcacgatattcccatacattgagaaaaggt 37628 Query: 625 tgaacagcttatccgcatcgatttt 649 |||| ||||||||| |||| ||||| Sbjct: 37627 tgaagagcttatcctcatcaatttt 37603 Score = 93.7 bits (47), Expect = 7e-16 Identities = 146/179 (81%) Strand = Plus / Minus Query: 329 aagcgctgagatgtggatgatcttggtcggagcacagcaatggcggtagttcttcgccac 388 |||||||||||||||||| |||||||| || || || || ||||||||||||||| |||| Sbjct: 38071 aagcgctgagatgtggatcatcttggttggggcgcaacagtggcggtagttcttcaccac 38012 Query: 389 attactgttgaaccggttaaggttggaggttgagtagtcatgtgcatcaggagcaggggt 448 ||| ||||| || | ||| |||| || |||||||||||| ||||||| ||| ||| || Sbjct: 38011 attgctgttaaatctgttgaggtgagaagttgagtagtcacgtgcatctggatcagcagt 37952 Query: 449 aatactcgggtacttagagaagttcacttccagtttctgcccaagtaacattgctccct 507 || | |||||||| ||| |||||||||| || |||| || | || ||||||||||| Sbjct: 37951 aacggttgggtacttggagtagttcacttcaagcttctttccgaatagcattgctccct 37893 Score = 58.0 bits (29), Expect = 4e-05 Identities = 137/173 (79%) Strand = Plus / Minus Query: 116 ctatatgttctgcatctgggagaaagaaatcctaatggtggatccctcgagcttgctcgc 175 |||||| ||||||||||| ||||| |||||||| ||| ||| || || |||||||| || Sbjct: 38284 ctatatattctgcatctgtgagaaggaaatcctgatgttggttcggtccagcttgcttgc 38225 Query: 176 atgcttacagaccagagcttcggtcgcctcttcctcgctctcgaactgcacgagagcctg 235 ||||| || || || || || ||||||||| |||| || ||| |||| || ||||| Sbjct: 38224 gtgcttctccacgagcgcctctgttgcctcttccacgctttcaaacagcacaagggcctg 38165 Query: 236 cgtcttgccgctcgcctcaaacagctttgacttgacgatggtgccatgctcac 288 ||| |||||| ||| ||| ||||| |||| ||| |||| || |||||||||| Sbjct: 38164 cgttttgccgttcgtctcgaacagtcttgagttggcgatagtcccatgctcac 38112 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Minus Query: 650 atcactgttcaaattgctaactataagtgtgcagcgatcattg 692 |||| |||||| ||||||||||| ||||||||| || |||||| Sbjct: 37523 atcagtgttcagattgctaactagaagtgtgcaacggtcattg 37481
>ref|XM_475305.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1170 Score = 83.8 bits (42), Expect = 7e-13 Identities = 285/366 (77%) Strand = Plus / Minus Query: 333 gctgagatgtggatgatcttggtcggagcacagcaatggcggtagttcttcgccacatta 392 ||||| |||||||| || ||||| ||||| ||||| || ||||||||||| ||||| Sbjct: 953 gctgaaatgtggatcattttggttggagcgcagcagtgacggtagttcttgattacattg 894 Query: 393 ctgttgaaccggttaaggttggaggttgagtagtcatgtgcatcaggagcaggggtaata 452 |||||||||| |||||| | || || | |||||| || ||||||||||| || ||| Sbjct: 893 ctgttgaacctgttaagacttgaagtcgtgtagtcgtgcgcatcaggagcgcttgttata 834 Query: 453 ctcgggtacttagagaagttcacttccagtttctgcccaagtaacattgctccctttaaa 512 | |||||||| ||| |||| || || || |||| ||| || || ||| ||||| | | Sbjct: 833 tttgggtactttgagtagttaacctcgagcttctttgcaaatagcactgcccccttcaga 774 Query: 513 tagtgtatagcaagctcggtctgaagcccatcagccatctggacgagggcatggtctggt 572 || || | ||| ||||| | ||||| |||||||||||| | || ||||| || |||||| Sbjct: 773 taatgcacagctagctcagcctgaaacccatcagccatttcaacaagggcgtgatctggt 714 Query: 573 ttattgcggagtaccttgattctcactatatttccataaatagaaaatagattgaacagc 632 || ||||| |||| ||||||| ||||| || ||||| | ||| || |||||||| ||| Sbjct: 713 ttgttgcgcagtattttgattcggactatgttcccatatagagagaacagattgaaaagc 654 Query: 633 ttatccgcatcgattttatcactgttcaaattgctaactataagtgtgcagcgatcattg 692 ||||| ||| ||||||||| |||||||||| || ||||| || ||||| || || ||| Sbjct: 653 ttatcttcatttattttatcagtgttcaaattactgactattagcgtgcaacgttcgttg 594 Query: 693 gtacca 698 |||||| Sbjct: 593 gtacca 588 Score = 81.8 bits (41), Expect = 3e-12 Identities = 122/149 (81%) Strand = Plus / Minus Query: 116 ctatatgttctgcatctgggagaaagaaatcctaatggtggatccctcgagcttgctcgc 175 ||||||| |||||||||||||||| || ||||| || ||| ||||| ||| | | || Sbjct: 1170 ctatatgctctgcatctgggagaatgagatcctgatcgtgttaccctccagcgaggtggc 1111 Query: 176 atgcttacagaccagagcttcggtcgcctcttcctcgctctcgaactgcacgagagcctg 235 ||| || | || || |||||||||||||| || |||||||||||||| | ||| ||||| Sbjct: 1110 atgttttgatacaagggcttcggtcgcctcctcttcgctctcgaactggatgagcgcctg 1051 Query: 236 cgtcttgccgctcgcctcaaacagctttg 264 | |||||||| || ||||||||||||||| Sbjct: 1050 cctcttgccgttcacctcaaacagctttg 1022
>dbj|AK102760.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107C19, full insert sequence Length = 1934 Score = 83.8 bits (42), Expect = 7e-13 Identities = 285/366 (77%) Strand = Plus / Minus Query: 333 gctgagatgtggatgatcttggtcggagcacagcaatggcggtagttcttcgccacatta 392 ||||| |||||||| || ||||| ||||| ||||| || ||||||||||| ||||| Sbjct: 1393 gctgaaatgtggatcattttggttggagcgcagcagtgacggtagttcttgattacattg 1334 Query: 393 ctgttgaaccggttaaggttggaggttgagtagtcatgtgcatcaggagcaggggtaata 452 |||||||||| |||||| | || || | |||||| || ||||||||||| || ||| Sbjct: 1333 ctgttgaacctgttaagacttgaagtcgtgtagtcgtgcgcatcaggagcgcttgttata 1274 Query: 453 ctcgggtacttagagaagttcacttccagtttctgcccaagtaacattgctccctttaaa 512 | |||||||| ||| |||| || || || |||| ||| || || ||| ||||| | | Sbjct: 1273 tttgggtactttgagtagttaacctcgagcttctttgcaaatagcactgcccccttcaga 1214 Query: 513 tagtgtatagcaagctcggtctgaagcccatcagccatctggacgagggcatggtctggt 572 || || | ||| ||||| | ||||| |||||||||||| | || ||||| || |||||| Sbjct: 1213 taatgcacagctagctcagcctgaaacccatcagccatttcaacaagggcgtgatctggt 1154 Query: 573 ttattgcggagtaccttgattctcactatatttccataaatagaaaatagattgaacagc 632 || ||||| |||| ||||||| ||||| || ||||| | ||| || |||||||| ||| Sbjct: 1153 ttgttgcgcagtattttgattcggactatgttcccatatagagagaacagattgaaaagc 1094 Query: 633 ttatccgcatcgattttatcactgttcaaattgctaactataagtgtgcagcgatcattg 692 ||||| ||| ||||||||| |||||||||| || ||||| || ||||| || || ||| Sbjct: 1093 ttatcttcatttattttatcagtgttcaaattactgactattagcgtgcaacgttcgttg 1034 Query: 693 gtacca 698 |||||| Sbjct: 1033 gtacca 1028 Score = 81.8 bits (41), Expect = 3e-12 Identities = 122/149 (81%) Strand = Plus / Minus Query: 116 ctatatgttctgcatctgggagaaagaaatcctaatggtggatccctcgagcttgctcgc 175 ||||||| |||||||||||||||| || ||||| || ||| ||||| ||| | | || Sbjct: 1610 ctatatgctctgcatctgggagaatgagatcctgatcgtgttaccctccagcgaggtggc 1551 Query: 176 atgcttacagaccagagcttcggtcgcctcttcctcgctctcgaactgcacgagagcctg 235 ||| || | || || |||||||||||||| || |||||||||||||| | ||| ||||| Sbjct: 1550 atgttttgatacaagggcttcggtcgcctcctcttcgctctcgaactggatgagcgcctg 1491 Query: 236 cgtcttgccgctcgcctcaaacagctttg 264 | |||||||| || ||||||||||||||| Sbjct: 1490 cctcttgccgttcacctcaaacagctttg 1462
>gb|AC105318.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1058_F05, complete sequence Length = 109126 Score = 81.8 bits (41), Expect = 3e-12 Identities = 122/149 (81%) Strand = Plus / Plus Query: 116 ctatatgttctgcatctgggagaaagaaatcctaatggtggatccctcgagcttgctcgc 175 ||||||| |||||||||||||||| || ||||| || ||| ||||| ||| | | || Sbjct: 57712 ctatatgctctgcatctgggagaatgagatcctgatcgtgttaccctccagcgaggtggc 57771 Query: 176 atgcttacagaccagagcttcggtcgcctcttcctcgctctcgaactgcacgagagcctg 235 ||| || | || || |||||||||||||| || |||||||||||||| | ||| ||||| Sbjct: 57772 atgttttgatacaagggcttcggtcgcctcctcttcgctctcgaactggatgagcgcctg 57831 Query: 236 cgtcttgccgctcgcctcaaacagctttg 264 | |||||||| || ||||||||||||||| Sbjct: 57832 cctcttgccgttcacctcaaacagctttg 57860 Score = 52.0 bits (26), Expect = 0.003 Identities = 89/110 (80%) Strand = Plus / Plus Query: 333 gctgagatgtggatgatcttggtcggagcacagcaatggcggtagttcttcgccacatta 392 ||||| |||||||| || ||||| ||||| ||||| || ||||||||||| ||||| Sbjct: 57929 gctgaaatgtggatcattttggttggagcgcagcagtgacggtagttcttgattacattg 57988 Query: 393 ctgttgaaccggttaaggttggaggttgagtagtcatgtgcatcaggagc 442 |||||||||| |||||| | || || | |||||| || ||||||||||| Sbjct: 57989 ctgttgaacctgttaagacttgaagtcgtgtagtcgtgcgcatcaggagc 58038 Score = 50.1 bits (25), Expect = 0.010 Identities = 85/105 (80%) Strand = Plus / Plus Query: 533 ctgaagcccatcagccatctggacgagggcatggtctggtttattgcggagtaccttgat 592 ||||| |||||||||||| | || ||||| || |||||||| ||||| |||| ||||| Sbjct: 58241 ctgaaacccatcagccatttcaacaagggcgtgatctggtttgttgcgcagtattttgat 58300 Query: 593 tctcactatatttccataaatagaaaatagattgaacagcttatc 637 || ||||| || ||||| | ||| || |||||||| |||||||| Sbjct: 58301 tcggactatgttcccatatagagagaacagattgaaaagcttatc 58345
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 81.8 bits (41), Expect = 3e-12 Identities = 122/149 (81%) Strand = Plus / Plus Query: 116 ctatatgttctgcatctgggagaaagaaatcctaatggtggatccctcgagcttgctcgc 175 ||||||| |||||||||||||||| || ||||| || ||| ||||| ||| | | || Sbjct: 21271106 ctatatgctctgcatctgggagaatgagatcctgatcgtgttaccctccagcgaggtggc 21271165 Query: 176 atgcttacagaccagagcttcggtcgcctcttcctcgctctcgaactgcacgagagcctg 235 ||| || | || || |||||||||||||| || |||||||||||||| | ||| ||||| Sbjct: 21271166 atgttttgatacaagggcttcggtcgcctcctcttcgctctcgaactggatgagcgcctg 21271225 Query: 236 cgtcttgccgctcgcctcaaacagctttg 264 | |||||||| || ||||||||||||||| Sbjct: 21271226 cctcttgccgttcacctcaaacagctttg 21271254 Score = 52.0 bits (26), Expect = 0.003 Identities = 89/110 (80%) Strand = Plus / Plus Query: 333 gctgagatgtggatgatcttggtcggagcacagcaatggcggtagttcttcgccacatta 392 ||||| |||||||| || ||||| ||||| ||||| || ||||||||||| ||||| Sbjct: 21271323 gctgaaatgtggatcattttggttggagcgcagcagtgacggtagttcttgattacattg 21271382 Query: 393 ctgttgaaccggttaaggttggaggttgagtagtcatgtgcatcaggagc 442 |||||||||| |||||| | || || | |||||| || ||||||||||| Sbjct: 21271383 ctgttgaacctgttaagacttgaagtcgtgtagtcgtgcgcatcaggagc 21271432 Score = 50.1 bits (25), Expect = 0.010 Identities = 85/105 (80%) Strand = Plus / Plus Query: 533 ctgaagcccatcagccatctggacgagggcatggtctggtttattgcggagtaccttgat 592 ||||| |||||||||||| | || ||||| || |||||||| ||||| |||| ||||| Sbjct: 21271635 ctgaaacccatcagccatttcaacaagggcgtgatctggtttgttgcgcagtattttgat 21271694 Query: 593 tctcactatatttccataaatagaaaatagattgaacagcttatc 637 || ||||| || ||||| | ||| || |||||||| |||||||| Sbjct: 21271695 tcggactatgttcccatatagagagaacagattgaaaagcttatc 21271739
>gb|BT018463.1| Zea mays clone EL01N0417C03.d mRNA sequence Length = 1476 Score = 79.8 bits (40), Expect = 1e-11 Identities = 202/256 (78%) Strand = Plus / Minus Query: 339 atgtggatgatcttggtcggagcacagcaatggcggtagttcttcgccacattactgttg 398 |||||||| ||||| || |||| |||||||| ||||||||||| |||| || |||||| Sbjct: 1004 atgtggatcatcttcgttggagagcagcaatgtcggtagttcttgaccacgttgctgttg 945 Query: 399 aaccggttaaggttggaggttgagtagtcatgtgcatcaggagcaggggtaatactcggg 458 |||||||| | | | ||| || ||||||| || || ||||||||||| || || | || Sbjct: 944 aaccggtttatgcttgagtttaagtagtcgtgggcgtcaggagcaggtgtgatgttagga 885 Query: 459 tacttagagaagttcacttccagtttctgcccaagtaacattgctccctttaaatagtgt 518 ||||| ||| |||| ||||||||||||| |||| || || | ||||| ||||| || Sbjct: 884 tactttgagtagttaacttccagtttcttaccaaatagtatagaccccttcaaataatgc 825 Query: 519 atagcaagctcggtctgaagcccatcagccatctggacgagggcatggtctggtttattg 578 | ||| ||||| | ||| | |||||||||||||| || || ||||| |||||||| || Sbjct: 824 acagctagctctgcctgcaacccatcagccatctcaacaagtgcatgatctggtttgtta 765 Query: 579 cggagtaccttgattc 594 || |||| |||||||| Sbjct: 764 cgcagtatcttgattc 749 Score = 58.0 bits (29), Expect = 4e-05 Identities = 98/121 (80%) Strand = Plus / Minus Query: 124 tctgcatctgggagaaagaaatcctaatggtggatccctcgagcttgctcgcatgcttac 183 ||||||||||||||||||| |||| || ||| ||||||||| |||| |||||||| Sbjct: 1219 tctgcatctgggagaaagagatccggatcgtgttaccctcgagcgtgctggcatgctttg 1160 Query: 184 agaccagagcttcggtcgcctcttcctcgctctcgaactgcacgagagcctgcgtcttgc 243 | || || || ||||| ||||| || |||||||||||| | |||||||||| |||||| Sbjct: 1159 acacgagggcctcggtagcctcctcttcgctctcgaacaaaatgagagcctgcctcttgc 1100 Query: 244 c 244 | Sbjct: 1099 c 1099
>gb|DQ428495.1| Sorghum propinquum locus PRC1123 genomic sequence Length = 715 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 539 cccatcagccatctggacgagggcatggtctggtttattgcggagtaccttgattctcac 598 |||||||||||||| || |||||||| |||||||| || || |||| ||| ||||| || Sbjct: 310 cccatcagccatctcaacaagggcatgatctggtttgttccgcagtatcttaattcttac 251 Query: 599 tatatttccataaatagaaaatagattgaacagcttatccgcatcgatttt 649 ||| |||||||| | ||||| |||||||| ||||||||| |||| ||||| Sbjct: 250 tatgtttccatacaaggaaaacagattgaaaagcttatcctcatcaatttt 200 Score = 67.9 bits (34), Expect = 4e-08 Identities = 106/130 (81%) Strand = Plus / Minus Query: 363 cagcaatggcggtagttcttcgccacattactgttgaaccggttaaggttggaggttgag 422 |||||||| ||||||||||| |||| || |||||||||||||| ||| | ||| || || Sbjct: 566 cagcaatgacggtagttcttgaccacgttgctgttgaaccggttcaggcttgagtttaag 507 Query: 423 tagtcatgtgcatcaggagcaggggtaatactcgggtacttagagaagttcacttccagt 482 ||||| || || || || ||||| || || | |||||||| ||| |||| ||||||||| Sbjct: 506 tagtcgtgggcgtctggggcaggtgtgatgttagggtactttgagtagttaacttccagt 447 Query: 483 ttctgcccaa 492 |||| ||||| Sbjct: 446 ttcttcccaa 437
>gb|DQ428494.1| Sorghum bicolor voucher PI585454 locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 539 cccatcagccatctggacgagggcatggtctggtttattgcggagtaccttgattctcac 598 |||||||||||||| || |||||||| |||||||| || || |||| ||| ||||| || Sbjct: 308 cccatcagccatctcaacaagggcatgatctggtttgttccgcagtatcttaattcttac 249 Query: 599 tatatttccataaatagaaaatagattgaacagcttatccgcatcgatttt 649 ||| |||||||| | ||||| |||||||| ||||||||| |||| ||||| Sbjct: 248 tatgtttccatacaaggaaaacagattgaaaagcttatcctcatcaatttt 198 Score = 52.0 bits (26), Expect = 0.003 Identities = 104/130 (80%) Strand = Plus / Minus Query: 363 cagcaatggcggtagttcttcgccacattactgttgaaccggttaaggttggaggttgag 422 |||||||| ||||||||||| |||| || |||||||||||||| ||| | ||| | || Sbjct: 564 cagcaatgacggtagttcttgaccacgttgctgttgaaccggttcaggcttgagttcaag 505 Query: 423 tagtcatgtgcatcaggagcaggggtaatactcgggtacttagagaagttcacttccagt 482 || || || || || || ||||| || || | |||||||| ||| |||| ||||||||| Sbjct: 504 taatcgtgggcgtctggggcaggtgtgatgttagggtactttgagtagttaacttccagt 445 Query: 483 ttctgcccaa 492 |||| ||||| Sbjct: 444 ttcttcccaa 435
>gb|DQ428493.1| Sorghum bicolor voucher PI267539b locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 539 cccatcagccatctggacgagggcatggtctggtttattgcggagtaccttgattctcac 598 |||||||||||||| || |||||||| |||||||| || || |||| ||| ||||| || Sbjct: 308 cccatcagccatctcaacaagggcatgatctggtttgttccgcagtatcttaattcttac 249 Query: 599 tatatttccataaatagaaaatagattgaacagcttatccgcatcgatttt 649 ||| |||||||| | ||||| |||||||| ||||||||| |||| ||||| Sbjct: 248 tatgtttccatacaaggaaaacagattgaaaagcttatcctcatcaatttt 198 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 363 cagcaatggcggtagttcttcgccacattactgttgaaccggtt 406 |||||||| ||||||||||| |||| || |||||||||||||| Sbjct: 564 cagcaatgacggtagttcttgaccacgttgctgttgaaccggtt 521
>gb|DQ428492.1| Sorghum bicolor voucher PI267539a locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 539 cccatcagccatctggacgagggcatggtctggtttattgcggagtaccttgattctcac 598 |||||||||||||| || |||||||| |||||||| || || |||| ||| ||||| || Sbjct: 308 cccatcagccatctcaacaagggcatgatctggtttgttccgcagtatcttaattcttac 249 Query: 599 tatatttccataaatagaaaatagattgaacagcttatccgcatcgatttt 649 ||| |||||||| | ||||| |||||||| ||||||||| |||| ||||| Sbjct: 248 tatgtttccatacaaggaaaacagattgaaaagcttatcctcatcaatttt 198 Score = 52.0 bits (26), Expect = 0.003 Identities = 104/130 (80%) Strand = Plus / Minus Query: 363 cagcaatggcggtagttcttcgccacattactgttgaaccggttaaggttggaggttgag 422 |||||||| ||||||||||| |||| || |||||||||||||| ||| | ||| | || Sbjct: 564 cagcaatgacggtagttcttgaccacgttgctgttgaaccggttcaggcttgagttcaag 505 Query: 423 tagtcatgtgcatcaggagcaggggtaatactcgggtacttagagaagttcacttccagt 482 || || || || || || ||||| || || | |||||||| ||| |||| ||||||||| Sbjct: 504 taatcgtgggcgtctggggcaggtgtgatgttagggtactttgagtagttaacttccagt 445 Query: 483 ttctgcccaa 492 |||| ||||| Sbjct: 444 ttcttcccaa 435
>gb|DQ428491.1| Sorghum bicolor voucher PI267408 locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 539 cccatcagccatctggacgagggcatggtctggtttattgcggagtaccttgattctcac 598 |||||||||||||| || |||||||| |||||||| || || |||| ||| ||||| || Sbjct: 308 cccatcagccatctcaacaagggcatgatctggtttgttccgcagtatcttaattcttac 249 Query: 599 tatatttccataaatagaaaatagattgaacagcttatccgcatcgatttt 649 ||| |||||||| | ||||| |||||||| ||||||||| |||| ||||| Sbjct: 248 tatgtttccatacaaggaaaacagattgaaaagcttatcctcatcaatttt 198 Score = 52.0 bits (26), Expect = 0.003 Identities = 104/130 (80%) Strand = Plus / Minus Query: 363 cagcaatggcggtagttcttcgccacattactgttgaaccggttaaggttggaggttgag 422 |||||||| ||||||||||| |||| || |||||||||||||| ||| | ||| | || Sbjct: 564 cagcaatgacggtagttcttgaccacgttgctgttgaaccggttcaggcttgagttcaag 505 Query: 423 tagtcatgtgcatcaggagcaggggtaatactcgggtacttagagaagttcacttccagt 482 || || || || || || ||||| || || | |||||||| ||| |||| ||||||||| Sbjct: 504 taatcgtgggcgtctggggcaggtgtgatgttagggtactttgagtagttaacttccagt 445 Query: 483 ttctgcccaa 492 |||| ||||| Sbjct: 444 ttcttcccaa 435
>gb|DQ428490.1| Sorghum bicolor voucher PI221607 locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 539 cccatcagccatctggacgagggcatggtctggtttattgcggagtaccttgattctcac 598 |||||||||||||| || |||||||| |||||||| || || |||| ||| ||||| || Sbjct: 308 cccatcagccatctcaacaagggcatgatctggtttgttccgcagtatcttaattcttac 249 Query: 599 tatatttccataaatagaaaatagattgaacagcttatccgcatcgatttt 649 ||| |||||||| | ||||| |||||||| ||||||||| |||| ||||| Sbjct: 248 tatgtttccatacaaggaaaacagattgaaaagcttatcctcatcaatttt 198 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 363 cagcaatggcggtagttcttcgccacattactgttgaaccggtt 406 |||||||| ||||||||||| |||| || |||||||||||||| Sbjct: 564 cagcaatgacggtagttcttgaccacgttgctgttgaaccggtt 521
>gb|DQ428489.1| Sorghum bicolor voucher PI152702 locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 539 cccatcagccatctggacgagggcatggtctggtttattgcggagtaccttgattctcac 598 |||||||||||||| || |||||||| |||||||| || || |||| ||| ||||| || Sbjct: 308 cccatcagccatctcaacaagggcatgatctggtttgttccgcagtatcttaattcttac 249 Query: 599 tatatttccataaatagaaaatagattgaacagcttatccgcatcgatttt 649 ||| |||||||| | ||||| |||||||| ||||||||| |||| ||||| Sbjct: 248 tatgtttccatacaaggaaaacagattgaaaagcttatcctcatcaatttt 198 Score = 52.0 bits (26), Expect = 0.003 Identities = 104/130 (80%) Strand = Plus / Minus Query: 363 cagcaatggcggtagttcttcgccacattactgttgaaccggttaaggttggaggttgag 422 |||||||| ||||||||||| |||| || |||||||||||||| ||| | ||| | || Sbjct: 564 cagcaatgacggtagttcttgaccacgttgctgttgaaccggttcaggcttgagttcaag 505 Query: 423 tagtcatgtgcatcaggagcaggggtaatactcgggtacttagagaagttcacttccagt 482 || || || || || || ||||| || || | |||||||| ||| |||| ||||||||| Sbjct: 504 taatcgtgggcgtctggggcaggtgtgatgttagggtactttgagtagttaacttccagt 445 Query: 483 ttctgcccaa 492 |||| ||||| Sbjct: 444 ttcttcccaa 435
>gb|DQ428488.1| Sorghum bicolor voucher NSL92371 locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 539 cccatcagccatctggacgagggcatggtctggtttattgcggagtaccttgattctcac 598 |||||||||||||| || |||||||| |||||||| || || |||| ||| ||||| || Sbjct: 308 cccatcagccatctcaacaagggcatgatctggtttgttccgcagtatcttaattcttac 249 Query: 599 tatatttccataaatagaaaatagattgaacagcttatccgcatcgatttt 649 ||| |||||||| | ||||| |||||||| ||||||||| |||| ||||| Sbjct: 248 tatgtttccatacaaggaaaacagattgaaaagcttatcctcatcaatttt 198 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 363 cagcaatggcggtagttcttcgccacattactgttgaaccggtt 406 |||||||| ||||||||||| |||| || |||||||||||||| Sbjct: 564 cagcaatgacggtagttcttgaccacgttgctgttgaaccggtt 521
>gb|DQ428487.1| Sorghum bicolor voucher NSL87902 locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 539 cccatcagccatctggacgagggcatggtctggtttattgcggagtaccttgattctcac 598 |||||||||||||| || |||||||| |||||||| || || |||| ||| ||||| || Sbjct: 308 cccatcagccatctcaacaagggcatgatctggtttgttccgcagtatcttaattcttac 249 Query: 599 tatatttccataaatagaaaatagattgaacagcttatccgcatcgatttt 649 ||| |||||||| | ||||| |||||||| ||||||||| |||| ||||| Sbjct: 248 tatgtttccatacaaggaaaacagattgaaaagcttatcctcatcaatttt 198 Score = 52.0 bits (26), Expect = 0.003 Identities = 104/130 (80%) Strand = Plus / Minus Query: 363 cagcaatggcggtagttcttcgccacattactgttgaaccggttaaggttggaggttgag 422 |||||||| ||||||||||| |||| || |||||||||||||| ||| | ||| | || Sbjct: 564 cagcaatgacggtagttcttgaccacgttgctgttgaaccggttcaggcttgagttcaag 505 Query: 423 tagtcatgtgcatcaggagcaggggtaatactcgggtacttagagaagttcacttccagt 482 || || || || || || ||||| || || | |||||||| ||| |||| ||||||||| Sbjct: 504 taatcgtgggcgtctggggcaggtgtgatgttagggtactttgagtagttaacttccagt 445 Query: 483 ttctgcccaa 492 |||| ||||| Sbjct: 444 ttcttcccaa 435
>gb|DQ428486.1| Sorghum bicolor voucher NSL87666 locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 539 cccatcagccatctggacgagggcatggtctggtttattgcggagtaccttgattctcac 598 |||||||||||||| || |||||||| |||||||| || || |||| ||| ||||| || Sbjct: 308 cccatcagccatctcaacaagggcatgatctggtttgttccgcagtatcttaattcttac 249 Query: 599 tatatttccataaatagaaaatagattgaacagcttatccgcatcgatttt 649 ||| |||||||| | ||||| |||||||| ||||||||| |||| ||||| Sbjct: 248 tatgtttccatacaaggaaaacagattgaaaagcttatcctcatcaatttt 198 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 363 cagcaatggcggtagttcttcgccacattactgttgaaccggtt 406 |||||||| ||||||||||| |||| || |||||||||||||| Sbjct: 564 cagcaatgacggtagttcttgaccacgttgctgttgaaccggtt 521
>gb|DQ428485.1| Sorghum bicolor voucher NSL77217 locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 539 cccatcagccatctggacgagggcatggtctggtttattgcggagtaccttgattctcac 598 |||||||||||||| || |||||||| |||||||| || || |||| ||| ||||| || Sbjct: 308 cccatcagccatctcaacaagggcatgatctggtttgttccgcagtatcttaattcttac 249 Query: 599 tatatttccataaatagaaaatagattgaacagcttatccgcatcgatttt 649 ||| |||||||| | ||||| |||||||| ||||||||| |||| ||||| Sbjct: 248 tatgtttccatacaaggaaaacagattgaaaagcttatcctcatcaatttt 198 Score = 52.0 bits (26), Expect = 0.003 Identities = 104/130 (80%) Strand = Plus / Minus Query: 363 cagcaatggcggtagttcttcgccacattactgttgaaccggttaaggttggaggttgag 422 |||||||| ||||||||||| |||| || |||||||||||||| ||| | ||| | || Sbjct: 564 cagcaatgacggtagttcttgaccacgttgctgttgaaccggttcaggcttgagttcaag 505 Query: 423 tagtcatgtgcatcaggagcaggggtaatactcgggtacttagagaagttcacttccagt 482 || || || || || || ||||| || || | |||||||| ||| |||| ||||||||| Sbjct: 504 taatcgtgggcgtctggggcaggtgtgatgttagggtactttgagtagttaacttccagt 445 Query: 483 ttctgcccaa 492 |||| ||||| Sbjct: 444 ttcttcccaa 435
>gb|DQ428484.1| Sorghum bicolor voucher NSL77034 locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 539 cccatcagccatctggacgagggcatggtctggtttattgcggagtaccttgattctcac 598 |||||||||||||| || |||||||| |||||||| || || |||| ||| ||||| || Sbjct: 308 cccatcagccatctcaacaagggcatgatctggtttgttccgcagtatcttaattcttac 249 Query: 599 tatatttccataaatagaaaatagattgaacagcttatccgcatcgatttt 649 ||| |||||||| | ||||| |||||||| ||||||||| |||| ||||| Sbjct: 248 tatgtttccatacaaggaaaacagattgaaaagcttatcctcatcaatttt 198 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 363 cagcaatggcggtagttcttcgccacattactgttgaaccggtt 406 |||||||| ||||||||||| |||| || |||||||||||||| Sbjct: 564 cagcaatgacggtagttcttgaccacgttgctgttgaaccggtt 521
>gb|DQ428483.1| Sorghum bicolor voucher NSL56174 locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 539 cccatcagccatctggacgagggcatggtctggtttattgcggagtaccttgattctcac 598 |||||||||||||| || |||||||| |||||||| || || |||| ||| ||||| || Sbjct: 308 cccatcagccatctcaacaagggcatgatctggtttgttccgcagtatcttaattcttac 249 Query: 599 tatatttccataaatagaaaatagattgaacagcttatccgcatcgatttt 649 ||| |||||||| | ||||| |||||||| ||||||||| |||| ||||| Sbjct: 248 tatgtttccatacaaggaaaacagattgaaaagcttatcctcatcaatttt 198 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 363 cagcaatggcggtagttcttcgccacattactgttgaaccggtt 406 |||||||| ||||||||||| |||| || |||||||||||||| Sbjct: 564 cagcaatgacggtagttcttgaccacgttgctgttgaaccggtt 521
>gb|DQ428482.1| Sorghum bicolor voucher NSL56003 locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 539 cccatcagccatctggacgagggcatggtctggtttattgcggagtaccttgattctcac 598 |||||||||||||| || |||||||| |||||||| || || |||| ||| ||||| || Sbjct: 308 cccatcagccatctcaacaagggcatgatctggtttgttccgcagtatcttaattcttac 249 Query: 599 tatatttccataaatagaaaatagattgaacagcttatccgcatcgatttt 649 ||| |||||||| | ||||| |||||||| ||||||||| |||| ||||| Sbjct: 248 tatgtttccatacaaggaaaacagattgaaaagcttatcctcatcaatttt 198 Score = 52.0 bits (26), Expect = 0.003 Identities = 104/130 (80%) Strand = Plus / Minus Query: 363 cagcaatggcggtagttcttcgccacattactgttgaaccggttaaggttggaggttgag 422 |||||||| ||||||||||| |||| || |||||||||||||| ||| | ||| | || Sbjct: 564 cagcaatgacggtagttcttaaccacgttgctgttgaaccggttcaggcttgagttcaag 505 Query: 423 tagtcatgtgcatcaggagcaggggtaatactcgggtacttagagaagttcacttccagt 482 || || || || || || ||||| || || | |||||||| ||| |||| ||||||||| Sbjct: 504 taatcgtgggcgtctggggcaggtgtgatgttagggtactttgagtagttaacttccagt 445 Query: 483 ttctgcccaa 492 |||| ||||| Sbjct: 444 ttcttcccaa 435
>gb|DQ428481.1| Sorghum bicolor voucher NSL55243 locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 539 cccatcagccatctggacgagggcatggtctggtttattgcggagtaccttgattctcac 598 |||||||||||||| || |||||||| |||||||| || || |||| ||| ||||| || Sbjct: 308 cccatcagccatctcaacaagggcatgatctggtttgttccgcagtatcttaattcttac 249 Query: 599 tatatttccataaatagaaaatagattgaacagcttatccgcatcgatttt 649 ||| |||||||| | ||||| |||||||| ||||||||| |||| ||||| Sbjct: 248 tatgtttccatacaaggaaaacagattgaaaagcttatcctcatcaatttt 198 Score = 52.0 bits (26), Expect = 0.003 Identities = 104/130 (80%) Strand = Plus / Minus Query: 363 cagcaatggcggtagttcttcgccacattactgttgaaccggttaaggttggaggttgag 422 |||||||| ||||||||||| |||| || |||||||||||||| ||| | ||| | || Sbjct: 564 cagcaatgacggtagttcttgaccacgttgctgttgaaccggttcaggcttgagttcaag 505 Query: 423 tagtcatgtgcatcaggagcaggggtaatactcgggtacttagagaagttcacttccagt 482 || || || || || || ||||| || || | |||||||| ||| |||| ||||||||| Sbjct: 504 taatcgtgggcgtctggggcaggtgtgatgttagggtactttgagtagttaacttccagt 445 Query: 483 ttctgcccaa 492 |||| ||||| Sbjct: 444 ttcttcccaa 435
>gb|DQ428480.1| Sorghum bicolor voucher NSL51365 locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 539 cccatcagccatctggacgagggcatggtctggtttattgcggagtaccttgattctcac 598 |||||||||||||| || |||||||| |||||||| || || |||| ||| ||||| || Sbjct: 308 cccatcagccatctcaacaagggcatgatctggtttgttccgcagtatcttaattcttac 249 Query: 599 tatatttccataaatagaaaatagattgaacagcttatccgcatcgatttt 649 ||| |||||||| | ||||| |||||||| ||||||||| |||| ||||| Sbjct: 248 tatgtttccatacaaggaaaacagattgaaaagcttatcctcatcaatttt 198 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 363 cagcaatggcggtagttcttcgccacattactgttgaaccggtt 406 |||||||| ||||||||||| |||| || |||||||||||||| Sbjct: 564 cagcaatgacggtagttcttgaccacgttgctgttgaaccggtt 521
>gb|DQ428479.1| Sorghum bicolor voucher NSL51030 locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 539 cccatcagccatctggacgagggcatggtctggtttattgcggagtaccttgattctcac 598 |||||||||||||| || |||||||| |||||||| || || |||| ||| ||||| || Sbjct: 308 cccatcagccatctcaacaagggcatgatctggtttgttccgcagtatcttaattcttac 249 Query: 599 tatatttccataaatagaaaatagattgaacagcttatccgcatcgatttt 649 ||| |||||||| | ||||| |||||||| ||||||||| |||| ||||| Sbjct: 248 tatgtttccatacaaggaaaacagattgaaaagcttatcctcatcaatttt 198 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 363 cagcaatggcggtagttcttcgccacattactgttgaaccggtt 406 |||||||| ||||||||||| |||| || |||||||||||||| Sbjct: 564 cagcaatgacggtagttcttgaccacgttgctgttgaaccggtt 521
>gb|DQ428478.1| Sorghum bicolor voucher NSL50875 locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 539 cccatcagccatctggacgagggcatggtctggtttattgcggagtaccttgattctcac 598 |||||||||||||| || |||||||| |||||||| || || |||| ||| ||||| || Sbjct: 308 cccatcagccatctcaacaagggcatgatctggtttgttccgcagtatcttaattcttac 249 Query: 599 tatatttccataaatagaaaatagattgaacagcttatccgcatcgatttt 649 ||| |||||||| | ||||| |||||||| ||||||||| |||| ||||| Sbjct: 248 tatgtttccatacaaggaaaacagattgaaaagcttatcctcatcaatttt 198 Score = 52.0 bits (26), Expect = 0.003 Identities = 104/130 (80%) Strand = Plus / Minus Query: 363 cagcaatggcggtagttcttcgccacattactgttgaaccggttaaggttggaggttgag 422 |||||||| ||||||||||| |||| || |||||||||||||| ||| | ||| | || Sbjct: 564 cagcaatgacggtagttcttgaccacgttgctgttgaaccggttcaggcttgagttcaag 505 Query: 423 tagtcatgtgcatcaggagcaggggtaatactcgggtacttagagaagttcacttccagt 482 || || || || || || ||||| || || | |||||||| ||| |||| ||||||||| Sbjct: 504 taatcgtgggcgtctggggcaggtgtgatgttagggtactttgagtagttaacttccagt 445 Query: 483 ttctgcccaa 492 |||| ||||| Sbjct: 444 ttcttcccaa 435
>gb|DQ428477.1| Sorghum bicolor voucher BTx623 locus PRC1123 genomic sequence Length = 713 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 539 cccatcagccatctggacgagggcatggtctggtttattgcggagtaccttgattctcac 598 |||||||||||||| || |||||||| |||||||| || || |||| ||| ||||| || Sbjct: 308 cccatcagccatctcaacaagggcatgatctggtttgttccgcagtatcttaattcttac 249 Query: 599 tatatttccataaatagaaaatagattgaacagcttatccgcatcgatttt 649 ||| |||||||| | ||||| |||||||| ||||||||| |||| ||||| Sbjct: 248 tatgtttccatacaaggaaaacagattgaaaagcttatcctcatcaatttt 198 Score = 52.0 bits (26), Expect = 0.003 Identities = 104/130 (80%) Strand = Plus / Minus Query: 363 cagcaatggcggtagttcttcgccacattactgttgaaccggttaaggttggaggttgag 422 |||||||| ||||||||||| |||| || |||||||||||||| ||| | ||| | || Sbjct: 564 cagcaatgacggtagttcttgaccacgttgctgttgaaccggttcaggcttgagttcaag 505 Query: 423 tagtcatgtgcatcaggagcaggggtaatactcgggtacttagagaagttcacttccagt 482 || || || || || || ||||| || || | |||||||| ||| |||| ||||||||| Sbjct: 504 taatcgtgggcgtctggggcaggtgtgatgttagggtactttgagtagttaacttccagt 445 Query: 483 ttctgcccaa 492 |||| ||||| Sbjct: 444 ttcttcccaa 435
>emb|AJ549383.1|CAR549383 Cicer arietinum mRNA for polypyrimidine track-binding protein homologue (ptb gene), clone CanPTB Length = 1687 Score = 69.9 bits (35), Expect = 1e-08 Identities = 89/107 (83%) Strand = Plus / Minus Query: 547 ccatctggacgagggcatggtctggtttattgcggagtaccttgattctcactatatttc 606 |||||||||| || ||||| ||||||||||| ||||| | |||||||| || || || | Sbjct: 944 ccatctggacaagtgcatgatctggtttatttcggagaagtttgattctgacaatgttac 885 Query: 607 cataaatagaaaatagattgaacagcttatccgcatcgattttatca 653 |||||||||| || | |||||||| |||||| |||||||| ||||| Sbjct: 884 cataaatagagaacaagttgaacagtttatcctcatcgattctatca 838
>gb|BT017944.1| Zea mays clone EL01N0521D08.c mRNA sequence Length = 430 Score = 56.0 bits (28), Expect = 2e-04 Identities = 118/148 (79%) Strand = Plus / Minus Query: 339 atgtggatgatcttggtcggagcacagcaatggcggtagttcttcgccacattactgttg 398 |||||||| ||||| || |||| |||||||| |||||| | || |||| || |||||| Sbjct: 258 atgtggatcatcttcgttggagagcagcaatgtcggtaggtgttgaccacgttgctgttg 199 Query: 399 aaccggttaaggttggaggttgagtagtcatgtgcatcaggagcaggggtaatactcggg 458 |||||||| | | | ||| || ||||||| || || ||||||||||| || || | || Sbjct: 198 aaccggtttatgcttgagtttaagtagtcgtgggcgtcaggagcaggtgtgatgttagga 139 Query: 459 tacttagagaagttcacttccagtttct 486 ||||| ||| |||| ||||||||||||| Sbjct: 138 tactttgagtagttaacttccagtttct 111
>ref|NM_103470.3| Arabidopsis thaliana RNA binding / nucleic acid binding AT1G43190 mRNA, complete cds Length = 1749 Score = 46.1 bits (23), Expect = 0.15 Identities = 74/91 (81%) Strand = Plus / Minus Query: 547 ccatctggacgagggcatggtctggtttattgcggagtaccttgattctcactatatttc 606 |||| ||||| ||||||||||| ||||| || || || | ||| || || || || || | Sbjct: 996 ccatttggacaagggcatggtcaggtttgttccgaagaagcttaatccttacaatgttcc 937 Query: 607 cataaatagaaaatagattgaacagcttatc 637 | |||| ||||||||||||||| |||||||| Sbjct: 936 cgtaaagagaaaatagattgaatagcttatc 906
>gb|AC005687.1| Arabidopsis thaliana BAC F1I21 from chromosome 1, near 59 cM, complete sequence Length = 129271 Score = 46.1 bits (23), Expect = 0.15 Identities = 74/91 (81%) Strand = Plus / Plus Query: 547 ccatctggacgagggcatggtctggtttattgcggagtaccttgattctcactatatttc 606 |||| ||||| ||||||||||| ||||| || || || | ||| || || || || || | Sbjct: 47982 ccatttggacaagggcatggtcaggtttgttccgaagaagcttaatccttacaatgttcc 48041 Query: 607 cataaatagaaaatagattgaacagcttatc 637 | |||| ||||||||||||||| |||||||| Sbjct: 48042 cgtaaagagaaaatagattgaatagcttatc 48072
>gb|BT015028.1| Arabidopsis thaliana At1g43190 mRNA, complete cds Length = 1299 Score = 46.1 bits (23), Expect = 0.15 Identities = 74/91 (81%) Strand = Plus / Minus Query: 547 ccatctggacgagggcatggtctggtttattgcggagtaccttgattctcactatatttc 606 |||| ||||| ||||||||||| ||||| || || || | ||| || || || || || | Sbjct: 868 ccatttggacaagggcatggtcaggtttgttccgaagaagcttaatccttacaatgttcc 809 Query: 607 cataaatagaaaatagattgaacagcttatc 637 | |||| ||||||||||||||| |||||||| Sbjct: 808 cgtaaagagaaaatagattgaatagcttatc 778
>gb|BT014899.1| Arabidopsis thaliana At1g43190 mRNA, complete cds Length = 1561 Score = 46.1 bits (23), Expect = 0.15 Identities = 74/91 (81%) Strand = Plus / Minus Query: 547 ccatctggacgagggcatggtctggtttattgcggagtaccttgattctcactatatttc 606 |||| ||||| ||||||||||| ||||| || || || | ||| || || || || || | Sbjct: 954 ccatttggacaagggcatggtcaggtttgttccgaagaagcttaatccttacaatgttcc 895 Query: 607 cataaatagaaaatagattgaacagcttatc 637 | |||| ||||||||||||||| |||||||| Sbjct: 894 cgtaaagagaaaatagattgaatagcttatc 864
>emb|BX817132.1|CNS0AEHF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH87ZH02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1580 Score = 46.1 bits (23), Expect = 0.15 Identities = 74/91 (81%) Strand = Plus / Minus Query: 547 ccatctggacgagggcatggtctggtttattgcggagtaccttgattctcactatatttc 606 |||| ||||| ||||||||||| ||||| || || || | ||| || || || || || | Sbjct: 967 ccatttggacaagggcatggtcaggtttgttccgaagaagcttaatccttacaatgttcc 908 Query: 607 cataaatagaaaatagattgaacagcttatc 637 | |||| ||||||||||||||| |||||||| Sbjct: 907 cgtaaagagaaaatagattgaatagcttatc 877
>emb|BX816341.1|CNS0AEGA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH42ZB09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1541 Score = 46.1 bits (23), Expect = 0.15 Identities = 74/91 (81%) Strand = Plus / Minus Query: 547 ccatctggacgagggcatggtctggtttattgcggagtaccttgattctcactatatttc 606 |||| ||||| ||||||||||| ||||| || || || | ||| || || || || || | Sbjct: 936 ccatttggacaagggcatggtcaggtttgttccgaagaagcttaatccttacaatgttcc 877 Query: 607 cataaatagaaaatagattgaacagcttatc 637 | |||| ||||||||||||||| |||||||| Sbjct: 876 cgtaaagagaaaatagattgaatagcttatc 846
>emb|BX816553.1|CNS0AE3K Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH55ZA09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1533 Score = 46.1 bits (23), Expect = 0.15 Identities = 74/91 (81%) Strand = Plus / Minus Query: 547 ccatctggacgagggcatggtctggtttattgcggagtaccttgattctcactatatttc 606 |||| ||||| ||||||||||| ||||| || || || | ||| || || || || || | Sbjct: 976 ccatttggacaagggcatggtcaggtttgttccgaagaagcttaatccttacaatgttcc 917 Query: 607 cataaatagaaaatagattgaacagcttatc 637 | |||| ||||||||||||||| |||||||| Sbjct: 916 cgtaaagagaaaatagattgaatagcttatc 886
>emb|BX816106.1|CNS0AE43 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH28ZD08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1663 Score = 46.1 bits (23), Expect = 0.15 Identities = 74/91 (81%) Strand = Plus / Minus Query: 547 ccatctggacgagggcatggtctggtttattgcggagtaccttgattctcactatatttc 606 |||| ||||| ||||||||||| ||||| || || || | ||| || || || || || | Sbjct: 998 ccatttggacaagggcatggtcaggtttgttccgaagaagcttaatccttacaatgttcc 939 Query: 607 cataaatagaaaatagattgaacagcttatc 637 | |||| ||||||||||||||| |||||||| Sbjct: 938 cgtaaagagaaaatagattgaatagcttatc 908
>gb|AY361956.1| Fagopyrum esculentum MT-like protein gene, partial cds Length = 979 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 tggaaagtttagaaagaaaga 84 ||||||||||||||||||||| Sbjct: 717 tggaaagtttagaaagaaaga 697
>gb|AC107058.4| Homo sapiens BAC clone RP11-633G11 from 4, complete sequence Length = 126135 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 603 tttccataaatagaaaataga 623 ||||||||||||||||||||| Sbjct: 21188 tttccataaatagaaaataga 21208
>gb|AC013288.7|AC013288 Arabidopsis thaliana chromosome 1 BAC F4N21 genomic sequence, complete sequence Length = 96899 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 601 tatttccataaatagaaaata 621 ||||||||||||||||||||| Sbjct: 45156 tatttccataaatagaaaata 45176
>emb|AJ414168.1|NTA414168 Nicotiana tabacum partial ORF3 and ORF4, pararetrovirus-like sequence, V9 Length = 4274 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 607 cataaatagaaaatagattga 627 ||||||||||||||||||||| Sbjct: 3898 cataaatagaaaatagattga 3918
>gb|AF022814.1|AF022814 Fugu rubripes transcription factor (SLP-1) and heme-oxygenase genes, complete cds Length = 37400 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 tcgcctcttcctcgctctcga 219 ||||||||||||||||||||| Sbjct: 20030 tcgcctcttcctcgctctcga 20010
>gb|AC116683.7| Mus musculus chromosome 7, clone RP24-472H13, complete sequence Length = 126085 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 463 tagagaagttcacttccagtttctg 487 |||| |||||||||||||||||||| Sbjct: 66084 tagaaaagttcacttccagtttctg 66060
>gb|AC158748.9| Mus musculus chromosome 7, clone RP23-239H14, complete sequence Length = 167144 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 tctgcatctgggagaaagaaa 144 ||||||||||||||||||||| Sbjct: 120723 tctgcatctgggagaaagaaa 120703
>ref|XM_594731.2| PREDICTED: Bos taurus similar to axonemal dynein heavy chain 7 (LOC516576), mRNA Length = 7305 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ggagaaagaaatcctaatgg 153 |||||||||||||||||||| Sbjct: 2688 ggagaaagaaatcctaatgg 2707 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ggagaaagaaatcctaatgg 153 |||||||||||||||||||| Sbjct: 1599 ggagaaagaaatcctaatgg 1618
>gb|AY861243.1| Cottus gobio microsatellite CottE2 sequence Length = 613 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 cttcggtcgcctcttcctcg 212 |||||||||||||||||||| Sbjct: 558 cttcggtcgcctcttcctcg 539
>emb|Z78022.1|HS37M17 Human DNA sequence from clone RP1-37M17 on chromosome X Contains the 5' end of the RAP2C gene for RAP2C (member of RAS oncogene family), a novel gene and a CpG island, complete sequence Length = 101076 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 609 taaatagaaaatagattgaa 628 |||||||||||||||||||| Sbjct: 85344 taaatagaaaatagattgaa 85325
>gb|AC159886.2| Mus musculus BAC clone RP24-397P9 from chromosome 9, complete sequence Length = 191328 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 acttccagtttctgcccaag 493 |||||||||||||||||||| Sbjct: 122378 acttccagtttctgcccaag 122397
>emb|BX323561.7| Zebrafish DNA sequence from clone DKEYP-113G3, complete sequence Length = 167995 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gaaagtttagaaagaaagag 85 |||||||||||||||||||| Sbjct: 135033 gaaagtttagaaagaaagag 135014
>ref|XM_686228.1| PREDICTED: Danio rerio similar to novel PH domain-containing protein (LOC562861), mRNA Length = 4417 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 agtttctgcccaagtaacat 499 |||||||||||||||||||| Sbjct: 1662 agtttctgcccaagtaacat 1643
>gb|AC160131.2| Mus musculus BAC clone RP23-226D9 from chromosome 12, complete sequence Length = 202807 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 584 taccttgattctcactatat 603 |||||||||||||||||||| Sbjct: 62688 taccttgattctcactatat 62707
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete sequence Length = 4332241 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 599 tatatttccataaatagaaa 618 |||||||||||||||||||| Sbjct: 2708399 tatatttccataaatagaaa 2708380
>gb|AC079148.9| Homo sapiens BAC clone RP11-111J6 from 2, complete sequence Length = 176690 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 ttaaatagtgtatagcaagc 527 |||||||||||||||||||| Sbjct: 60007 ttaaatagtgtatagcaagc 60026
>dbj|BA000013.4| Mesorhizobium loti MAFF303099 pMLa DNA, cpmplete genome Length = 351911 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 tggatgatcttggtcggagcacag 365 |||||||||||| ||||||||||| Sbjct: 337270 tggatgatcttgttcggagcacag 337293
>gb|AC005863.1|AC005863 Homo sapiens chromosome 17, clone hRPK.786_O_4, complete sequence Length = 172203 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 ggaaagtttagaaagaaaga 84 |||||||||||||||||||| Sbjct: 146677 ggaaagtttagaaagaaaga 146658
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 599 tatatttccataaatagaaa 618 |||||||||||||||||||| Sbjct: 1584795 tatatttccataaatagaaa 1584814 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,973,250 Number of Sequences: 3902068 Number of extensions: 6973250 Number of successful extensions: 130564 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 130273 Number of HSP's gapped (non-prelim): 271 length of query: 698 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 675 effective length of database: 17,143,297,704 effective search space: 11571725950200 effective search space used: 11571725950200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
