| Clone Name | rbags30p01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_450237.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1226 Score = 361 bits (182), Expect = 2e-96 Identities = 461/554 (83%) Strand = Plus / Minus Query: 77 actttctgcaccaggtgctctccatacaccaccttctcgtacttggcaacgccgcccgtt 136 |||||||| |||| ||| ||||| ||||| ||||| || ||||||||||| || || ||| Sbjct: 1116 actttctgaaccaagtgttctccgtacacaaccttttcatacttggcaacaccacctgtt 1057 Query: 137 ttctcccggcagaactccaccggctccaccgcagcgtcgaagttcgactcatagaaaaag 196 |||||||||||||||| || ||||| || ||||| |||||||| ||||||||||| || Sbjct: 1056 ctctcccggcagaactcaacaggctctacggcagcatcgaagtttgactcatagaagaat 997 Query: 197 gcgacagatacacggtagcgaggggagttgttgacgactctgtgcagcgtgggctggtat 256 || ||||||||||||||||||||||||||||| || |||| || || || ||||| ||| Sbjct: 996 gcaacagatacacggtagcgaggggagttgttaacaactcgatgaagtgttggctgatat 937 Query: 257 atcccattcgaccagaccttcaacatgtccccaatgttgcaaacgaaggttcccgggacc 316 || || || ||||| ||||||| |||||| || |||||||| ||||||||||| |||| Sbjct: 936 attccgtttgaccaaaccttcagcatgtcaccgatgttgcagacgaaggttcctgggatt 877 Query: 317 ggcttggcgtatatccactcaccggactggtttctgacctcaagagcacaaatatcatca 376 || ||||| |||||||| ||||| || ||||||||||||||||| || || || |||||| Sbjct: 876 ggtttggcatatatccattcacctgattggtttctgacctcaagggcgcatatgtcatca 817 Query: 377 tcctgattcaccaatgtcagaaggccataatctgtatgagctccacatcctatatcagtg 436 |||||||| |||||||||||||| ||||| ||||| ||||||||||| || |||||||| Sbjct: 816 tcctgattaaccaatgtcagaagaccatagtctgtgtgagctccacacccagtatcagtg 757 Query: 437 cgttcctcttgtgggatgtcatctgagactggatagccaattaacctgagaacccagaaa 496 || | ||||| ||| || ||| ||| || ||||| || || | |||| |||||| ||| Sbjct: 756 cgctgctcttctggaatatcagttgatacaggataaccgatcagcctgcaaacccaaaaa 697 Query: 497 gcatctcccgccactcccccttcgaaagcatccaacggcgcacccaatgctaaggctatg 556 | |||||| || | ||||| |||||||| | ||||||||||| || |||||||| Sbjct: 696 ggatctcctgcggttgtaccttcaaaagcatcaactggcgcacccaacgccaaggctata 637 Query: 557 cctctcatgatcttccttgaaagatctcgtagaaggcttatatagttttccagcagcgcg 616 |||| ||||||||| ||||||||||||| ||||||||| ||||||||||||||||| | Sbjct: 636 cctcgcatgatctttcttgaaagatctcttagaaggctgatatagttttccagcagtaca 577 Query: 617 tcaaaatttgatgg 630 |||||||||||||| Sbjct: 576 tcaaaatttgatgg 563
>ref|XM_507425.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0069P02.20 mRNA Length = 1276 Score = 361 bits (182), Expect = 2e-96 Identities = 461/554 (83%) Strand = Plus / Minus Query: 77 actttctgcaccaggtgctctccatacaccaccttctcgtacttggcaacgccgcccgtt 136 |||||||| |||| ||| ||||| ||||| ||||| || ||||||||||| || || ||| Sbjct: 1122 actttctgaaccaagtgttctccgtacacaaccttttcatacttggcaacaccacctgtt 1063 Query: 137 ttctcccggcagaactccaccggctccaccgcagcgtcgaagttcgactcatagaaaaag 196 |||||||||||||||| || ||||| || ||||| |||||||| ||||||||||| || Sbjct: 1062 ctctcccggcagaactcaacaggctctacggcagcatcgaagtttgactcatagaagaat 1003 Query: 197 gcgacagatacacggtagcgaggggagttgttgacgactctgtgcagcgtgggctggtat 256 || ||||||||||||||||||||||||||||| || |||| || || || ||||| ||| Sbjct: 1002 gcaacagatacacggtagcgaggggagttgttaacaactcgatgaagtgttggctgatat 943 Query: 257 atcccattcgaccagaccttcaacatgtccccaatgttgcaaacgaaggttcccgggacc 316 || || || ||||| ||||||| |||||| || |||||||| ||||||||||| |||| Sbjct: 942 attccgtttgaccaaaccttcagcatgtcaccgatgttgcagacgaaggttcctgggatt 883 Query: 317 ggcttggcgtatatccactcaccggactggtttctgacctcaagagcacaaatatcatca 376 || ||||| |||||||| ||||| || ||||||||||||||||| || || || |||||| Sbjct: 882 ggtttggcatatatccattcacctgattggtttctgacctcaagggcgcatatgtcatca 823 Query: 377 tcctgattcaccaatgtcagaaggccataatctgtatgagctccacatcctatatcagtg 436 |||||||| |||||||||||||| ||||| ||||| ||||||||||| || |||||||| Sbjct: 822 tcctgattaaccaatgtcagaagaccatagtctgtgtgagctccacacccagtatcagtg 763 Query: 437 cgttcctcttgtgggatgtcatctgagactggatagccaattaacctgagaacccagaaa 496 || | ||||| ||| || ||| ||| || ||||| || || | |||| |||||| ||| Sbjct: 762 cgctgctcttctggaatatcagttgatacaggataaccgatcagcctgcaaacccaaaaa 703 Query: 497 gcatctcccgccactcccccttcgaaagcatccaacggcgcacccaatgctaaggctatg 556 | |||||| || | ||||| |||||||| | ||||||||||| || |||||||| Sbjct: 702 ggatctcctgcggttgtaccttcaaaagcatcaactggcgcacccaacgccaaggctata 643 Query: 557 cctctcatgatcttccttgaaagatctcgtagaaggcttatatagttttccagcagcgcg 616 |||| ||||||||| ||||||||||||| ||||||||| ||||||||||||||||| | Sbjct: 642 cctcgcatgatctttcttgaaagatctcttagaaggctgatatagttttccagcagtaca 583 Query: 617 tcaaaatttgatgg 630 |||||||||||||| Sbjct: 582 tcaaaatttgatgg 569
>ref|XM_506638.2| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0069P02.20 mRNA Length = 1285 Score = 361 bits (182), Expect = 2e-96 Identities = 461/554 (83%) Strand = Plus / Minus Query: 77 actttctgcaccaggtgctctccatacaccaccttctcgtacttggcaacgccgcccgtt 136 |||||||| |||| ||| ||||| ||||| ||||| || ||||||||||| || || ||| Sbjct: 1120 actttctgaaccaagtgttctccgtacacaaccttttcatacttggcaacaccacctgtt 1061 Query: 137 ttctcccggcagaactccaccggctccaccgcagcgtcgaagttcgactcatagaaaaag 196 |||||||||||||||| || ||||| || ||||| |||||||| ||||||||||| || Sbjct: 1060 ctctcccggcagaactcaacaggctctacggcagcatcgaagtttgactcatagaagaat 1001 Query: 197 gcgacagatacacggtagcgaggggagttgttgacgactctgtgcagcgtgggctggtat 256 || ||||||||||||||||||||||||||||| || |||| || || || ||||| ||| Sbjct: 1000 gcaacagatacacggtagcgaggggagttgttaacaactcgatgaagtgttggctgatat 941 Query: 257 atcccattcgaccagaccttcaacatgtccccaatgttgcaaacgaaggttcccgggacc 316 || || || ||||| ||||||| |||||| || |||||||| ||||||||||| |||| Sbjct: 940 attccgtttgaccaaaccttcagcatgtcaccgatgttgcagacgaaggttcctgggatt 881 Query: 317 ggcttggcgtatatccactcaccggactggtttctgacctcaagagcacaaatatcatca 376 || ||||| |||||||| ||||| || ||||||||||||||||| || || || |||||| Sbjct: 880 ggtttggcatatatccattcacctgattggtttctgacctcaagggcgcatatgtcatca 821 Query: 377 tcctgattcaccaatgtcagaaggccataatctgtatgagctccacatcctatatcagtg 436 |||||||| |||||||||||||| ||||| ||||| ||||||||||| || |||||||| Sbjct: 820 tcctgattaaccaatgtcagaagaccatagtctgtgtgagctccacacccagtatcagtg 761 Query: 437 cgttcctcttgtgggatgtcatctgagactggatagccaattaacctgagaacccagaaa 496 || | ||||| ||| || ||| ||| || ||||| || || | |||| |||||| ||| Sbjct: 760 cgctgctcttctggaatatcagttgatacaggataaccgatcagcctgcaaacccaaaaa 701 Query: 497 gcatctcccgccactcccccttcgaaagcatccaacggcgcacccaatgctaaggctatg 556 | |||||| || | ||||| |||||||| | ||||||||||| || |||||||| Sbjct: 700 ggatctcctgcggttgtaccttcaaaagcatcaactggcgcacccaacgccaaggctata 641 Query: 557 cctctcatgatcttccttgaaagatctcgtagaaggcttatatagttttccagcagcgcg 616 |||| ||||||||| ||||||||||||| ||||||||| ||||||||||||||||| | Sbjct: 640 cctcgcatgatctttcttgaaagatctcttagaaggctgatatagttttccagcagtaca 581 Query: 617 tcaaaatttgatgg 630 |||||||||||||| Sbjct: 580 tcaaaatttgatgg 567
>dbj|AK104787.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-E01, full insert sequence Length = 1226 Score = 361 bits (182), Expect = 2e-96 Identities = 461/554 (83%) Strand = Plus / Minus Query: 77 actttctgcaccaggtgctctccatacaccaccttctcgtacttggcaacgccgcccgtt 136 |||||||| |||| ||| ||||| ||||| ||||| || ||||||||||| || || ||| Sbjct: 1116 actttctgaaccaagtgttctccgtacacaaccttttcatacttggcaacaccacctgtt 1057 Query: 137 ttctcccggcagaactccaccggctccaccgcagcgtcgaagttcgactcatagaaaaag 196 |||||||||||||||| || ||||| || ||||| |||||||| ||||||||||| || Sbjct: 1056 ctctcccggcagaactcaacaggctctacggcagcatcgaagtttgactcatagaagaat 997 Query: 197 gcgacagatacacggtagcgaggggagttgttgacgactctgtgcagcgtgggctggtat 256 || ||||||||||||||||||||||||||||| || |||| || || || ||||| ||| Sbjct: 996 gcaacagatacacggtagcgaggggagttgttaacaactcgatgaagtgttggctgatat 937 Query: 257 atcccattcgaccagaccttcaacatgtccccaatgttgcaaacgaaggttcccgggacc 316 || || || ||||| ||||||| |||||| || |||||||| ||||||||||| |||| Sbjct: 936 attccgtttgaccaaaccttcagcatgtcaccgatgttgcagacgaaggttcctgggatt 877 Query: 317 ggcttggcgtatatccactcaccggactggtttctgacctcaagagcacaaatatcatca 376 || ||||| |||||||| ||||| || ||||||||||||||||| || || || |||||| Sbjct: 876 ggtttggcatatatccattcacctgattggtttctgacctcaagggcgcatatgtcatca 817 Query: 377 tcctgattcaccaatgtcagaaggccataatctgtatgagctccacatcctatatcagtg 436 |||||||| |||||||||||||| ||||| ||||| ||||||||||| || |||||||| Sbjct: 816 tcctgattaaccaatgtcagaagaccatagtctgtgtgagctccacacccagtatcagtg 757 Query: 437 cgttcctcttgtgggatgtcatctgagactggatagccaattaacctgagaacccagaaa 496 || | ||||| ||| || ||| ||| || ||||| || || | |||| |||||| ||| Sbjct: 756 cgctgctcttctggaatatcagttgatacaggataaccgatcagcctgcaaacccaaaaa 697 Query: 497 gcatctcccgccactcccccttcgaaagcatccaacggcgcacccaatgctaaggctatg 556 | |||||| || | ||||| |||||||| | ||||||||||| || |||||||| Sbjct: 696 ggatctcctgcggttgtaccttcaaaagcatcaactggcgcacccaacgccaaggctata 637 Query: 557 cctctcatgatcttccttgaaagatctcgtagaaggcttatatagttttccagcagcgcg 616 |||| ||||||||| ||||||||||||| ||||||||| ||||||||||||||||| | Sbjct: 636 cctcgcatgatctttcttgaaagatctcttagaaggctgatatagttttccagcagtaca 577 Query: 617 tcaaaatttgatgg 630 |||||||||||||| Sbjct: 576 tcaaaatttgatgg 563
>dbj|AK101447.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033039L18, full insert sequence Length = 1285 Score = 353 bits (178), Expect = 5e-94 Identities = 460/554 (83%) Strand = Plus / Minus Query: 77 actttctgcaccaggtgctctccatacaccaccttctcgtacttggcaacgccgcccgtt 136 |||||||| |||| ||| ||||| ||||| ||||| || ||||||||||| || || ||| Sbjct: 1120 actttctgaaccaagtgttctccgtacacaaccttttcatacttggcaacaccacctgtt 1061 Query: 137 ttctcccggcagaactccaccggctccaccgcagcgtcgaagttcgactcatagaaaaag 196 |||||||||||||||| || ||||| || ||||| |||||||| ||||||||||| || Sbjct: 1060 ctctcccggcagaactcaacaggctctacggcagcatcgaagtttgactcatagaagaat 1001 Query: 197 gcgacagatacacggtagcgaggggagttgttgacgactctgtgcagcgtgggctggtat 256 || ||||||||||||||||||||||||||||| || |||| || || || ||||| ||| Sbjct: 1000 gcaacagatacacggtagcgaggggagttgttaacaactcgatgaagtgttggctgatat 941 Query: 257 atcccattcgaccagaccttcaacatgtccccaatgttgcaaacgaaggttcccgggacc 316 || || || ||||| ||||||| |||||| || |||||||| ||||||||||| |||| Sbjct: 940 attccgtttgaccaaaccttcagcatgtcaccgatgttgcagacgaaggttcctgggatt 881 Query: 317 ggcttggcgtatatccactcaccggactggtttctgacctcaagagcacaaatatcatca 376 || ||||| |||||||| ||||| || |||||||||||||||| || || || |||||| Sbjct: 880 ggtttggcatatatccattcacctgatcggtttctgacctcaagggcgcatatgtcatca 821 Query: 377 tcctgattcaccaatgtcagaaggccataatctgtatgagctccacatcctatatcagtg 436 |||||||| |||||||||||||| ||||| ||||| ||||||||||| || |||||||| Sbjct: 820 tcctgattaaccaatgtcagaagaccatagtctgtgtgagctccacacccagtatcagtg 761 Query: 437 cgttcctcttgtgggatgtcatctgagactggatagccaattaacctgagaacccagaaa 496 || | ||||| ||| || ||| ||| || ||||| || || | |||| |||||| ||| Sbjct: 760 cgctgctcttctggaatatcagttgatacaggataaccgatcagcctgcaaacccaaaaa 701 Query: 497 gcatctcccgccactcccccttcgaaagcatccaacggcgcacccaatgctaaggctatg 556 | |||||| || | ||||| |||||||| | ||||||||||| || |||||||| Sbjct: 700 ggatctcctgcggttgtaccttcaaaagcatcaactggcgcacccaacgccaaggctata 641 Query: 557 cctctcatgatcttccttgaaagatctcgtagaaggcttatatagttttccagcagcgcg 616 |||| ||||||||| ||||||||||||| ||||||||| ||||||||||||||||| | Sbjct: 640 cctcgcatgatctttcttgaaagatctcttagaaggctgatatagttttccagcagtaca 581 Query: 617 tcaaaatttgatgg 630 |||||||||||||| Sbjct: 580 tcaaaatttgatgg 567
>dbj|AK067016.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092B16, full insert sequence Length = 1276 Score = 353 bits (178), Expect = 5e-94 Identities = 460/554 (83%) Strand = Plus / Minus Query: 77 actttctgcaccaggtgctctccatacaccaccttctcgtacttggcaacgccgcccgtt 136 |||||||| |||| ||| ||||| ||||| ||||| || ||||||||||| || || ||| Sbjct: 1122 actttctgaaccaagtgttctccgtacacaaccttttcatacttggcaacaccacctgtt 1063 Query: 137 ttctcccggcagaactccaccggctccaccgcagcgtcgaagttcgactcatagaaaaag 196 |||||||||||||||| || ||||| || ||||| |||||||| ||||||| ||| || Sbjct: 1062 ctctcccggcagaactcaacaggctctacggcagcatcgaagtttgactcatggaagaat 1003 Query: 197 gcgacagatacacggtagcgaggggagttgttgacgactctgtgcagcgtgggctggtat 256 || ||||||||||||||||||||||||||||| || |||| || || || ||||| ||| Sbjct: 1002 gcaacagatacacggtagcgaggggagttgttaacaactcgatgaagtgttggctgatat 943 Query: 257 atcccattcgaccagaccttcaacatgtccccaatgttgcaaacgaaggttcccgggacc 316 || || || ||||| ||||||| |||||| || |||||||| ||||||||||| |||| Sbjct: 942 attccgtttgaccaaaccttcagcatgtcaccgatgttgcagacgaaggttcctgggatt 883 Query: 317 ggcttggcgtatatccactcaccggactggtttctgacctcaagagcacaaatatcatca 376 || ||||| |||||||| ||||| || ||||||||||||||||| || || || |||||| Sbjct: 882 ggtttggcatatatccattcacctgattggtttctgacctcaagggcgcatatgtcatca 823 Query: 377 tcctgattcaccaatgtcagaaggccataatctgtatgagctccacatcctatatcagtg 436 |||||||| |||||||||||||| ||||| ||||| ||||||||||| || |||||||| Sbjct: 822 tcctgattaaccaatgtcagaagaccatagtctgtgtgagctccacacccagtatcagtg 763 Query: 437 cgttcctcttgtgggatgtcatctgagactggatagccaattaacctgagaacccagaaa 496 || | ||||| ||| || ||| ||| || ||||| || || | |||| |||||| ||| Sbjct: 762 cgctgctcttctggaatatcagttgatacaggataaccgatcagcctgcaaacccaaaaa 703 Query: 497 gcatctcccgccactcccccttcgaaagcatccaacggcgcacccaatgctaaggctatg 556 | |||||| || | ||||| |||||||| | ||||||||||| || |||||||| Sbjct: 702 ggatctcctgcggttgtaccttcaaaagcatcaactggcgcacccaacgccaaggctata 643 Query: 557 cctctcatgatcttccttgaaagatctcgtagaaggcttatatagttttccagcagcgcg 616 |||| ||||||||| ||||||||||||| ||||||||| ||||||||||||||||| | Sbjct: 642 cctcgcatgatctttcttgaaagatctcttagaaggctgatatagttttccagcagtaca 583 Query: 617 tcaaaatttgatgg 630 |||||||||||||| Sbjct: 582 tcaaaatttgatgg 569
>dbj|AK067408.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102F13, full insert sequence Length = 3080 Score = 301 bits (152), Expect = 1e-78 Identities = 431/524 (82%) Strand = Plus / Minus Query: 107 accttctcgtacttggcaacgccgcccgttttctcccggcagaactccaccggctccacc 166 ||||| || |||||||| || || || ||| |||||||||||||||| || ||||| | Sbjct: 980 accttttcatacttggcgacaccacctgttctctcccggcagaactcaacaggctctatg 921 Query: 167 gcagcgtcgaagttcgactcatagaaaaaggcgacagatacacggtagcgaggggagttg 226 ||||| |||||||| ||||||||||||||||| |||||||||||||| |||||||| ||| Sbjct: 920 gcagcatcgaagtttgactcatagaaaaaggcaacagatacacggtaacgaggggaattg 861 Query: 227 ttgacgactctgtgcagcgtgggctggtatatcccattcgaccagaccttcaacatgtcc 286 || || |||| || || || || || ||||| ||||| ||||| ||||||| |||||| Sbjct: 860 ttaacaactcgatgaagtgttggttgatatattccatttgaccaaaccttcagcatgtca 801 Query: 287 ccaatgttgcaaacgaaggttcccgggaccggcttggcgtatatccactcaccggactgg 346 ||||||||||| |||||||||||||||| || ||||| || ||||||||||| || ||| Sbjct: 800 ccaatgttgcagacgaaggttcccgggattggtttggcataaatccactcacctgattgg 741 Query: 347 tttctgacctcaagagcacaaatatcatcatcctgattcaccaatgtcagaaggccataa 406 ||| |||||||||| ||||| || |||||||| || || |||||||||||||||||||| Sbjct: 740 tttttgacctcaagggcacatatgtcatcatcttggttaaccaatgtcagaaggccatag 681 Query: 407 tctgtatgagctccacatcctatatcagtgcgttcctcttgtgggatgtcatctgagact 466 ||||| ||||||||||| || | |||||||| | ||||| | | || || ||| || Sbjct: 680 tctgtgtgagctccacagccagtgtcagtgcgatgctcttctagaatatcggttgataca 621 Query: 467 ggatagccaattaacctgagaacccagaaagcatctcccgccactcccccttcgaaagca 526 ||||| ||||| |||||| |||||| |||| |||||| || || ||||| |||||| Sbjct: 620 ggataaccaatcaacctgcaaacccaaaaaggatctcctgcggttctaccttcaaaagca 561 Query: 527 tccaacggcgcacccaatgctaaggctatgcctctcatgatcttccttgaaagatctcgt 586 || | ||| |||||||||| |||||||| ||| ||||||||| || |||||||||| | Sbjct: 560 tcaactggcccacccaatgccaaggctataccttgcatgatctttctggaaagatctctt 501 Query: 587 agaaggcttatatagttttccagcagcgcgtcaaaatttgatgg 630 |||||||| |||||||||| || || || |||||||||||||| Sbjct: 500 agaaggctgatatagttttttagtagtgcatcaaaatttgatgg 457
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 85.7 bits (43), Expect = 2e-13 Identities = 76/87 (87%) Strand = Plus / Plus Query: 270 agaccttcaacatgtccccaatgttgcaaacgaaggttcccgggaccggcttggcgtata 329 ||||||||| |||||| ||||||||||| |||||||||||||||| || ||||| || | Sbjct: 3669138 agaccttcagcatgtcaccaatgttgcagacgaaggttcccgggattggtttggcataaa 3669197 Query: 330 tccactcaccggactggtttctgacct 356 |||||||||| || |||||| |||||| Sbjct: 3669198 tccactcacctgattggtttttgacct 3669224 Score = 81.8 bits (41), Expect = 3e-12 Identities = 92/109 (84%) Strand = Plus / Plus Query: 77 actttctgcaccaggtgctctccatacaccaccttctcgtacttggcaacgccgcccgtt 136 |||||||| |||| ||| ||||| ||||| ||||| || ||||||||||| || || ||| Sbjct: 3350354 actttctgaaccaagtgttctccgtacacaaccttttcatacttggcaacaccacctgtt 3350413 Query: 137 ttctcccggcagaactccaccggctccaccgcagcgtcgaagttcgact 185 |||||||||||||||| || ||||| || ||||| |||||||| |||| Sbjct: 3350414 ctctcccggcagaactcaacaggctctacggcagcatcgaagtttgact 3350462 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 272 accttcaacatgtccccaatgttgcaaacgaaggttcccgggaccggcttggcgtatatc 331 ||||||| |||||| || |||||||| ||||||||||| |||| || ||||| |||||| Sbjct: 3350730 accttcagcatgtcaccgatgttgcagacgaaggttcctgggattggtttggcatatatc 3350789 Query: 332 cactcaccggactggtttctgacct 356 || ||||| || ||||||||||||| Sbjct: 3350790 cattcacctgattggtttctgacct 3350814 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 184 ctcatagaaaaaggcgacagatacacggtagcgaggggagttgtt 228 ||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 3668963 ctcatagaaaaaggcaacagatacacggtaacgaggggaattgtt 3669007 Score = 65.9 bits (33), Expect = 2e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 515 ccttcgaaagcatccaacggcgcacccaatgctaaggctatgcctctcatgatcttcctt 574 ||||| |||||||| | ||||||||||| || |||||||| |||| ||||||||| ||| Sbjct: 3351843 ccttcaaaagcatcaactggcgcacccaacgccaaggctatacctcgcatgatctttctt 3351902 Query: 575 gaaagatct 583 ||||||||| Sbjct: 3351903 gaaagatct 3351911 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 184 ctcatagaaaaaggcgacagatacacggtagcgaggggagttgtt 228 ||||||||| || || ||||||||||||||||||||||||||||| Sbjct: 3350560 ctcatagaagaatgcaacagatacacggtagcgaggggagttgtt 3350604 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 586 tagaaggcttatatagttttccagcagcgcgtcaaaatttgatgg 630 ||||||||| ||||||||||||||||| | |||||||||||||| Sbjct: 3352023 tagaaggctgatatagttttccagcagtacatcaaaatttgatgg 3352067 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 acctcaagagcacaaatatcatcatcctgattcaccaatgtcagaag 399 |||||||| || || || |||||||||||||| |||||||||||||| Sbjct: 3351375 acctcaagggcgcatatgtcatcatcctgattaaccaatgtcagaag 3351421 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 353 acctcaagagcacaaatatcatcatcctgattcaccaatgtcagaaggcc 402 |||||||| ||||| || |||||||| || || ||||||||||||||||| Sbjct: 3672174 acctcaagggcacatatgtcatcatcttggttaaccaatgtcagaaggcc 3672223 Score = 46.1 bits (23), Expect = 0.14 Identities = 65/79 (82%) Strand = Plus / Plus Query: 107 accttctcgtacttggcaacgccgcccgttttctcccggcagaactccaccggctccacc 166 ||||| || |||||||| || || || ||| |||||||||||||||| || ||||| | Sbjct: 3668787 accttttcatacttggcgacaccacctgttctctcccggcagaactcaacaggctctatg 3668846 Query: 167 gcagcgtcgaagttcgact 185 ||||| |||||||| |||| Sbjct: 3668847 gcagcatcgaagtttgact 3668865 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 586 tagaaggcttatatagttttccagcagcgcgtcaaaatttgatgg 630 ||||||||| |||||||||| || || || |||||||||||||| Sbjct: 3672775 tagaaggctgatatagttttttagtagtgcatcaaaatttgatgg 3672819
>dbj|AP005587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0499G10 Length = 158375 Score = 85.7 bits (43), Expect = 2e-13 Identities = 76/87 (87%) Strand = Plus / Plus Query: 270 agaccttcaacatgtccccaatgttgcaaacgaaggttcccgggaccggcttggcgtata 329 ||||||||| |||||| ||||||||||| |||||||||||||||| || ||||| || | Sbjct: 154913 agaccttcagcatgtcaccaatgttgcagacgaaggttcccgggattggtttggcataaa 154972 Query: 330 tccactcaccggactggtttctgacct 356 |||||||||| || |||||| |||||| Sbjct: 154973 tccactcacctgattggtttttgacct 154999 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 184 ctcatagaaaaaggcgacagatacacggtagcgaggggagttgtt 228 ||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 154738 ctcatagaaaaaggcaacagatacacggtaacgaggggaattgtt 154782 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 353 acctcaagagcacaaatatcatcatcctgattcaccaatgtcagaaggcc 402 |||||||| ||||| || |||||||| || || ||||||||||||||||| Sbjct: 157949 acctcaagggcacatatgtcatcatcttggttaaccaatgtcagaaggcc 157998 Score = 46.1 bits (23), Expect = 0.14 Identities = 65/79 (82%) Strand = Plus / Plus Query: 107 accttctcgtacttggcaacgccgcccgttttctcccggcagaactccaccggctccacc 166 ||||| || |||||||| || || || ||| |||||||||||||||| || ||||| | Sbjct: 154562 accttttcatacttggcgacaccacctgttctctcccggcagaactcaacaggctctatg 154621 Query: 167 gcagcgtcgaagttcgact 185 ||||| |||||||| |||| Sbjct: 154622 gcagcatcgaagtttgact 154640
>dbj|AP005578.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1695_A02 Length = 156214 Score = 85.7 bits (43), Expect = 2e-13 Identities = 76/87 (87%) Strand = Plus / Plus Query: 270 agaccttcaacatgtccccaatgttgcaaacgaaggttcccgggaccggcttggcgtata 329 ||||||||| |||||| ||||||||||| |||||||||||||||| || ||||| || | Sbjct: 77399 agaccttcagcatgtcaccaatgttgcagacgaaggttcccgggattggtttggcataaa 77458 Query: 330 tccactcaccggactggtttctgacct 356 |||||||||| || |||||| |||||| Sbjct: 77459 tccactcacctgattggtttttgacct 77485 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 184 ctcatagaaaaaggcgacagatacacggtagcgaggggagttgtt 228 ||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 77224 ctcatagaaaaaggcaacagatacacggtaacgaggggaattgtt 77268 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 353 acctcaagagcacaaatatcatcatcctgattcaccaatgtcagaaggcc 402 |||||||| ||||| || |||||||| || || ||||||||||||||||| Sbjct: 80435 acctcaagggcacatatgtcatcatcttggttaaccaatgtcagaaggcc 80484 Score = 46.1 bits (23), Expect = 0.14 Identities = 65/79 (82%) Strand = Plus / Plus Query: 107 accttctcgtacttggcaacgccgcccgttttctcccggcagaactccaccggctccacc 166 ||||| || |||||||| || || || ||| |||||||||||||||| || ||||| | Sbjct: 77048 accttttcatacttggcgacaccacctgttctctcccggcagaactcaacaggctctatg 77107 Query: 167 gcagcgtcgaagttcgact 185 ||||| |||||||| |||| Sbjct: 77108 gcagcatcgaagtttgact 77126 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 586 tagaaggcttatatagttttccagcagcgcgtcaaaatttgatgg 630 ||||||||| |||||||||| || || || |||||||||||||| Sbjct: 81036 tagaaggctgatatagttttttagtagtgcatcaaaatttgatgg 81080
>gb|AY103966.1| Zea mays PCO093008 mRNA sequence Length = 866 Score = 83.8 bits (42), Expect = 7e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 353 acctcaagagcacaaatatcatcatcctgattcaccaatgtcagaaggccataatctgta 412 |||||||| ||||| || ||||||||||| || |||| ||| ||||| |||||||||||| Sbjct: 803 acctcaagggcacatatgtcatcatcctggttaaccagtgttagaagtccataatctgta 744 Query: 413 tgagctccacatcctatatcagtgcg 438 ||||||||||| || |||||||||| Sbjct: 743 tgagctccacagccagtatcagtgcg 718 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Minus Query: 596 atatagttttccagcagcgcgtcaaaatttgatgggta 633 ||||| ||||||||||| | ||||||||||||||||| Sbjct: 566 atataattttccagcagtacttcaaaatttgatgggta 529
>dbj|AP005729.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0069P02 Length = 163033 Score = 81.8 bits (41), Expect = 3e-12 Identities = 92/109 (84%) Strand = Plus / Plus Query: 77 actttctgcaccaggtgctctccatacaccaccttctcgtacttggcaacgccgcccgtt 136 |||||||| |||| ||| ||||| ||||| ||||| || ||||||||||| || || ||| Sbjct: 66286 actttctgaaccaagtgttctccgtacacaaccttttcatacttggcaacaccacctgtt 66345 Query: 137 ttctcccggcagaactccaccggctccaccgcagcgtcgaagttcgact 185 |||||||||||||||| || ||||| || ||||| |||||||| |||| Sbjct: 66346 ctctcccggcagaactcaacaggctctacggcagcatcgaagtttgact 66394 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 272 accttcaacatgtccccaatgttgcaaacgaaggttcccgggaccggcttggcgtatatc 331 ||||||| |||||| || |||||||| ||||||||||| |||| || ||||| |||||| Sbjct: 66662 accttcagcatgtcaccgatgttgcagacgaaggttcctgggattggtttggcatatatc 66721 Query: 332 cactcaccggactggtttctgacct 356 || ||||| || ||||||||||||| Sbjct: 66722 cattcacctgattggtttctgacct 66746 Score = 65.9 bits (33), Expect = 2e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 515 ccttcgaaagcatccaacggcgcacccaatgctaaggctatgcctctcatgatcttcctt 574 ||||| |||||||| | ||||||||||| || |||||||| |||| ||||||||| ||| Sbjct: 67775 ccttcaaaagcatcaactggcgcacccaacgccaaggctatacctcgcatgatctttctt 67834 Query: 575 gaaagatct 583 ||||||||| Sbjct: 67835 gaaagatct 67843 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 184 ctcatagaaaaaggcgacagatacacggtagcgaggggagttgtt 228 ||||||||| || || ||||||||||||||||||||||||||||| Sbjct: 66492 ctcatagaagaatgcaacagatacacggtagcgaggggagttgtt 66536 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 586 tagaaggcttatatagttttccagcagcgcgtcaaaatttgatgg 630 ||||||||| ||||||||||||||||| | |||||||||||||| Sbjct: 67955 tagaaggctgatatagttttccagcagtacatcaaaatttgatgg 67999 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 acctcaagagcacaaatatcatcatcctgattcaccaatgtcagaag 399 |||||||| || || || |||||||||||||| |||||||||||||| Sbjct: 67307 acctcaagggcgcatatgtcatcatcctgattaaccaatgtcagaag 67353
>dbj|AP005550.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1058_F03 Length = 150486 Score = 81.8 bits (41), Expect = 3e-12 Identities = 92/109 (84%) Strand = Plus / Plus Query: 77 actttctgcaccaggtgctctccatacaccaccttctcgtacttggcaacgccgcccgtt 136 |||||||| |||| ||| ||||| ||||| ||||| || ||||||||||| || || ||| Sbjct: 18835 actttctgaaccaagtgttctccgtacacaaccttttcatacttggcaacaccacctgtt 18894 Query: 137 ttctcccggcagaactccaccggctccaccgcagcgtcgaagttcgact 185 |||||||||||||||| || ||||| || ||||| |||||||| |||| Sbjct: 18895 ctctcccggcagaactcaacaggctctacggcagcatcgaagtttgact 18943 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 272 accttcaacatgtccccaatgttgcaaacgaaggttcccgggaccggcttggcgtatatc 331 ||||||| |||||| || |||||||| ||||||||||| |||| || ||||| |||||| Sbjct: 19211 accttcagcatgtcaccgatgttgcagacgaaggttcctgggattggtttggcatatatc 19270 Query: 332 cactcaccggactggtttctgacct 356 || ||||| || ||||||||||||| Sbjct: 19271 cattcacctgattggtttctgacct 19295 Score = 65.9 bits (33), Expect = 2e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 515 ccttcgaaagcatccaacggcgcacccaatgctaaggctatgcctctcatgatcttcctt 574 ||||| |||||||| | ||||||||||| || |||||||| |||| ||||||||| ||| Sbjct: 20324 ccttcaaaagcatcaactggcgcacccaacgccaaggctatacctcgcatgatctttctt 20383 Query: 575 gaaagatct 583 ||||||||| Sbjct: 20384 gaaagatct 20392 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 184 ctcatagaaaaaggcgacagatacacggtagcgaggggagttgtt 228 ||||||||| || || ||||||||||||||||||||||||||||| Sbjct: 19041 ctcatagaagaatgcaacagatacacggtagcgaggggagttgtt 19085 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 586 tagaaggcttatatagttttccagcagcgcgtcaaaatttgatgg 630 ||||||||| ||||||||||||||||| | |||||||||||||| Sbjct: 20504 tagaaggctgatatagttttccagcagtacatcaaaatttgatgg 20548 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 353 acctcaagagcacaaatatcatcatcctgattcaccaatgtcagaag 399 |||||||| || || || |||||||||||||| |||||||||||||| Sbjct: 19856 acctcaagggcgcatatgtcatcatcctgattaaccaatgtcagaag 19902
>ref|NM_202678.1| Arabidopsis thaliana oxidoreductase AT3G50210 transcript variant AT3G50210.2 mRNA, complete cds Length = 1325 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Minus Query: 158 ggctccaccgcagcgtcgaagttcgactcatagaaaaaggcgacagatacacggtagcga 217 ||||||||| | ||||||||||| | ||||||||| || |||||| | |||||||| || Sbjct: 1044 ggctccaccaccgcgtcgaagttagtctcatagaagaatgcgacacaaacacggtattga 985 Query: 218 ggggagttgttga 230 || ||||| |||| Sbjct: 984 ggagagttattga 972
>ref|NM_114881.3| Arabidopsis thaliana iron ion binding / isopenicillin-N synthase/ oxidoreductase AT3G50210 transcript variant AT3G50210.1 mRNA, complete cds Length = 1355 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Minus Query: 158 ggctccaccgcagcgtcgaagttcgactcatagaaaaaggcgacagatacacggtagcga 217 ||||||||| | ||||||||||| | ||||||||| || |||||| | |||||||| || Sbjct: 1074 ggctccaccaccgcgtcgaagttagtctcatagaagaatgcgacacaaacacggtattga 1015 Query: 218 ggggagttgttga 230 || ||||| |||| Sbjct: 1014 ggagagttattga 1002
>ref|NM_001035757.1| Arabidopsis thaliana iron ion binding / isopenicillin-N synthase/ oxidoreductase AT3G50210 transcript variant AT3G50210.3 mRNA, complete cds Length = 1277 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Minus Query: 158 ggctccaccgcagcgtcgaagttcgactcatagaaaaaggcgacagatacacggtagcga 217 ||||||||| | ||||||||||| | ||||||||| || |||||| | |||||||| || Sbjct: 996 ggctccaccaccgcgtcgaagttagtctcatagaagaatgcgacacaaacacggtattga 937 Query: 218 ggggagttgttga 230 || ||||| |||| Sbjct: 936 ggagagttattga 924
>gb|BT006421.1| Arabidopsis thaliana At3g50210 gene, complete cds Length = 999 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Minus Query: 158 ggctccaccgcagcgtcgaagttcgactcatagaaaaaggcgacagatacacggtagcga 217 ||||||||| | ||||||||||| | ||||||||| || |||||| | |||||||| || Sbjct: 884 ggctccaccaccgcgtcgaagttagtctcatagaagaatgcgacacaaacacggtattga 825 Query: 218 ggggagttgttga 230 || ||||| |||| Sbjct: 824 ggagagttattga 812
>emb|BX823996.1|CNS0A7RJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH12ZH11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1207 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Minus Query: 158 ggctccaccgcagcgtcgaagttcgactcatagaaaaaggcgacagatacacggtagcga 217 ||||||||| | ||||||||||| | ||||||||| || |||||| | |||||||| || Sbjct: 1045 ggctccaccaccgcgtcgaagttagtctcatagaagaatgcgacacaaacacggtattga 986 Query: 218 ggggagttgttga 230 || ||||| |||| Sbjct: 985 ggagagttattga 973
>emb|BX824932.1|CNS0A7GY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH83ZG02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1317 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Minus Query: 158 ggctccaccgcagcgtcgaagttcgactcatagaaaaaggcgacagatacacggtagcga 217 ||||||||| | ||||||||||| | ||||||||| || |||||| | |||||||| || Sbjct: 1074 ggctccaccaccgcgtcgaagttagtctcatagaagaatgcgacacaaacacggtattga 1015 Query: 218 ggggagttgttga 230 || ||||| |||| Sbjct: 1014 ggagagttattga 1002
>gb|AY086558.1| Arabidopsis thaliana clone 25787 mRNA, complete sequence Length = 1291 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Minus Query: 158 ggctccaccgcagcgtcgaagttcgactcatagaaaaaggcgacagatacacggtagcga 217 ||||||||| | ||||||||||| | ||||||||| || |||||| | |||||||| || Sbjct: 1013 ggctccaccaccgcgtcgaagttagtctcatagaagaatgcgacacaaacacggtattga 954 Query: 218 ggggagttgttga 230 || ||||| |||| Sbjct: 953 ggagagttattga 941
>ref|NM_114823.1| Arabidopsis thaliana iron ion binding / isopenicillin-N synthase/ oxidoreductase AT3G49630 mRNA, complete cds Length = 1110 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 152 tccaccggctccaccgcagcgtcgaagttcg 182 |||| |||||||||||| ||||||||||||| Sbjct: 989 tccaacggctccaccgctgcgtcgaagttcg 959
>emb|AL132964.2|ATT9C5 Arabidopsis thaliana DNA chromosome 3, BAC clone T9C5 Length = 104204 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 152 tccaccggctccaccgcagcgtcgaagttcg 182 |||| |||||||||||| ||||||||||||| Sbjct: 75786 tccaacggctccaccgctgcgtcgaagttcg 75756
>ref|XM_614052.2| PREDICTED: Bos taurus similar to Transcription factor SOX-6 (LOC534321), partial mRNA Length = 1865 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 31 atttcacctcccctcccccaac 52 |||||||||||||||||||||| Sbjct: 947 atttcacctcccctcccccaac 968
>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence Length = 3288558 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 455 tcatctgagactggatagccaatta 479 |||||| |||||||||||||||||| Sbjct: 2352468 tcatcttagactggatagccaatta 2352444
>gb|AF069392.3|AF069392 Vibrio parahaemolyticus polar flagellar and chemotaxis genes, complete cds; and unknown genes Length = 39101 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 455 tcatctgagactggatagccaatta 479 |||||| |||||||||||||||||| Sbjct: 23656 tcatcttagactggatagccaatta 23680
>gb|AC167978.4| Mus musculus BAC clone RP23-72M20 from chromosome 7, complete sequence Length = 214959 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 tcaagagcacaaatatcatc 375 |||||||||||||||||||| Sbjct: 39961 tcaagagcacaaatatcatc 39942
>gb|AC154385.2| Mus musculus BAC clone RP23-23O22 from chromosome 17, complete sequence Length = 221564 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 563 atgatcttccttgaaagatc 582 |||||||||||||||||||| Sbjct: 146916 atgatcttccttgaaagatc 146897
>ref|XM_458007.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0C08327g) partial mRNA Length = 2952 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 603 tttccagcagcgcgtcaaaatttg 626 |||||||||||| ||||||||||| Sbjct: 1543 tttccagcagcgagtcaaaatttg 1520
>gb|AC124024.2| Mus musculus chromosome X clone RP21-83F5 map qA7.2, complete sequence Length = 155644 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 593 cttatatagttttccagcag 612 |||||||||||||||||||| Sbjct: 53807 cttatatagttttccagcag 53788
>gb|AC124023.2| Mus musculus chromosome X clone RP21-437J18 map qA7.2, complete sequence Length = 168775 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 593 cttatatagttttccagcag 612 |||||||||||||||||||| Sbjct: 124794 cttatatagttttccagcag 124775
>ref|NM_018731.1| Mus musculus ATPase, H+/K+ exchanging, gastric, alpha polypeptide (Atp4a), mRNA Length = 3127 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 tcaagagcacaaatatcatc 375 |||||||||||||||||||| Sbjct: 494 tcaagagcacaaatatcatc 513
>gb|AC124179.4| Mus musculus chromosome 12 clone RP23-198B21, complete sequence Length = 192472 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 565 gatcttccttgaaagatctc 584 |||||||||||||||||||| Sbjct: 150548 gatcttccttgaaagatctc 150529
>gb|AC127687.3| Mus musculus BAC clone RP24-194G16 from chromosome 16, complete sequence Length = 158006 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 gtgagtactttctgcaccag 90 |||||||||||||||||||| Sbjct: 11201 gtgagtactttctgcaccag 11182
>gb|AC147050.2| Pan troglodytes BAC clone RP43-138F4 from 7, complete sequence Length = 190626 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 tacagaaatttgttccctttcagg 30 |||| ||||||||||||||||||| Sbjct: 104969 tacacaaatttgttccctttcagg 104946
>gb|BC015262.1| Mus musculus ATPase, H+/K+ exchanging, gastric, alpha polypeptide, mRNA (cDNA clone MGC:18426 IMAGE:4241977), complete cds Length = 3476 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 tcaagagcacaaatatcatc 375 |||||||||||||||||||| Sbjct: 513 tcaagagcacaaatatcatc 532
>gb|AC123940.4| Mus musculus BAC clone RP23-440M11 from chromosome 12, complete sequence Length = 197665 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 565 gatcttccttgaaagatctc 584 |||||||||||||||||||| Sbjct: 12810 gatcttccttgaaagatctc 12791
>gb|AC093392.4| Homo sapiens BAC clone RP11-814E24 from 7, complete sequence Length = 99597 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 tacagaaatttgttccctttcagg 30 |||| ||||||||||||||||||| Sbjct: 40162 tacacaaatttgttccctttcagg 40185
>gb|AC140951.1| Pan troglodytes BAC clone RP43-60K3 from 7, complete sequence Length = 165269 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 tacagaaatttgttccctttcagg 30 |||| ||||||||||||||||||| Sbjct: 50907 tacacaaatttgttccctttcagg 50884
>emb|AL138737.25| Human DNA sequence from clone RP3-332B22 on chromosome 6 Contains a novel gene, complete sequence Length = 70025 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 549 aggctatgcctctcatgatc 568 |||||||||||||||||||| Sbjct: 26250 aggctatgcctctcatgatc 26269
>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces hansenii Length = 1592360 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 603 tttccagcagcgcgtcaaaatttg 626 |||||||||||| ||||||||||| Sbjct: 683763 tttccagcagcgagtcaaaatttg 683786
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 gaactccaccggctccaccg 167 |||||||||||||||||||| Sbjct: 212803 gaactccaccggctccaccg 212784
>emb|AL731844.18| Mouse DNA sequence from clone RP23-153K9 on chromosome X, complete sequence Length = 183643 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 593 cttatatagttttccagcag 612 |||||||||||||||||||| Sbjct: 90087 cttatatagttttccagcag 90068
>gb|AC148939.8| Pan troglodytes BAC clone CH251-51M11 from chromosome 7, complete sequence Length = 183313 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 tacagaaatttgttccctttcagg 30 |||| ||||||||||||||||||| Sbjct: 101759 tacacaaatttgttccctttcagg 101782
>ref|NM_166641.1| Drosophila melanogaster alpha-catenin-related CG2987-RB, transcript variant B (alpha-catenin-related), mRNA Length = 2730 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 aactccaccggctccaccgc 168 |||||||||||||||||||| Sbjct: 1283 aactccaccggctccaccgc 1264
>ref|NM_143816.2| Drosophila melanogaster alpha-catenin-related CG2987-RA, transcript variant A (alpha-catenin-related), mRNA Length = 2736 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 aactccaccggctccaccgc 168 |||||||||||||||||||| Sbjct: 1289 aactccaccggctccaccgc 1270
>dbj|AK143905.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:F520009J21 product:ATPase, H+/K+ transporting, alpha polypeptide, full insert sequence Length = 2602 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 tcaagagcacaaatatcatc 375 |||||||||||||||||||| Sbjct: 528 tcaagagcacaaatatcatc 547
>gb|AC148300.3| Pan troglodytes BAC clone CH251-64B13 from chromosome 7, complete sequence Length = 173568 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 tacagaaatttgttccctttcagg 30 |||| ||||||||||||||||||| Sbjct: 105262 tacacaaatttgttccctttcagg 105239
>gb|AC099018.1| Drosophila melanogaster, chromosome 2R, region 60A-60B, BAC clone BACR28M05, complete sequence Length = 154840 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 aactccaccggctccaccgc 168 |||||||||||||||||||| Sbjct: 50957 aactccaccggctccaccgc 50938
>gb|S74801.1| H(+)-K(+)-ATPase alpha-subunit [rats, Sprague-Dawley, kidney, mRNA Partial, 1361 nt] Length = 1361 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 tcaagagcacaaatatcatc 375 |||||||||||||||||||| Sbjct: 323 tcaagagcacaaatatcatc 342
>gb|AC087072.2|AC087072 Homo sapiens chromosome 7 clone RP11-609L3, complete sequence Length = 150856 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 tacagaaatttgttccctttcagg 30 |||| ||||||||||||||||||| Sbjct: 106068 tacacaaatttgttccctttcagg 106091
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 498 catctcccgccactccccct 517 |||||||||||||||||||| Sbjct: 22400490 catctcccgccactccccct 22400509
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 caggatttcacctcccctccccca 50 ||||||||||| |||||||||||| Sbjct: 30594581 caggatttcacttcccctccccca 30594558
>gb|AC150749.3| Pan troglodytes BAC clone CH251-553P23 from chromosome 7, complete sequence Length = 237211 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 tacagaaatttgttccctttcagg 30 |||| ||||||||||||||||||| Sbjct: 74013 tacacaaatttgttccctttcagg 73990
>gb|AC009970.10| Homo sapiens BAC clone RP11-440P5 from 2, complete sequence Length = 137009 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 tttcacctcccctcccccaa 51 |||||||||||||||||||| Sbjct: 95450 tttcacctcccctcccccaa 95469
>dbj|AP003309.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0036G09 Length = 124118 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 caggatttcacctcccctccccca 50 ||||||||||| |||||||||||| Sbjct: 77185 caggatttcacttcccctccccca 77162
>dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1060H01 Length = 157987 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 caggatttcacctcccctccccca 50 ||||||||||| |||||||||||| Sbjct: 36858 caggatttcacttcccctccccca 36835
>gb|AC061992.11| Homo sapiens chromosome 17, clone RP11-806H10, complete sequence Length = 100190 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 tttcacctcccctcccccaa 51 |||||||||||||||||||| Sbjct: 13386 tttcacctcccctcccccaa 13367
>gb|BT024411.1| Drosophila melanogaster IP03655 full insert cDNA Length = 2683 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 aactccaccggctccaccgc 168 |||||||||||||||||||| Sbjct: 1207 aactccaccggctccaccgc 1188
>ref|XM_341834.2| PREDICTED: Rattus norvegicus ATPase, H+/K+ transporting, alpha polypeptide (Atp4a), mRNA Length = 3120 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 tcaagagcacaaatatcatc 375 |||||||||||||||||||| Sbjct: 496 tcaagagcacaaatatcatc 515
>gb|AC154185.1| Mus musculus BAC clone RP24-67L15 from chromosome 17, complete sequence Length = 167726 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 atttcacctcccctccccca 50 |||||||||||||||||||| Sbjct: 98274 atttcacctcccctccccca 98255
>gb|AF113936.1|AF113936 Drosophila melanogaster alpha-catenin-related protein mRNA, complete cds Length = 2738 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 aactccaccggctccaccgc 168 |||||||||||||||||||| Sbjct: 1289 aactccaccggctccaccgc 1270
>gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69 of 73 of the complete sequence Length = 598988 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 aactccaccggctccaccgc 168 |||||||||||||||||||| Sbjct: 480756 aactccaccggctccaccgc 480737
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 498 catctcccgccactccccct 517 |||||||||||||||||||| Sbjct: 22328835 catctcccgccactccccct 22328854
>emb|AL732640.4|CNS08C9F Oryza sativa chromosome 12, . BAC OSJNBa0022K16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183414 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 498 catctcccgccactccccct 517 |||||||||||||||||||| Sbjct: 107044 catctcccgccactccccct 107025
>gb|AC004642.1|AC004642 Drosophila melanogaster DNA sequence (P1s DS00543 (D193) and DS02867 (D200)), complete sequence Length = 148432 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 aactccaccggctccaccgc 168 |||||||||||||||||||| Sbjct: 132265 aactccaccggctccaccgc 132284
>gb|AC131776.5| Mus musculus BAC clone RP24-318B19 from chromosome 16, complete sequence Length = 181574 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 gtgagtactttctgcaccag 90 |||||||||||||||||||| Sbjct: 127125 gtgagtactttctgcaccag 127144
>gb|AC165340.3| Mus musculus BAC clone RP24-63G4 from chromosome 7, complete sequence Length = 241077 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 tcaagagcacaaatatcatc 375 |||||||||||||||||||| Sbjct: 38393 tcaagagcacaaatatcatc 38412
>gb|U17282.1|MMU17282 Mus musculus gastric H(+)-K(+)-ATPase alpha subunit mRNA, complete cds Length = 3127 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 tcaagagcacaaatatcatc 375 |||||||||||||||||||| Sbjct: 494 tcaagagcacaaatatcatc 513
>gb|J02649.1|RATATPAST Rat stomach (H+,K+)-ATPase mRNA, complete cds Length = 3615 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 tcaagagcacaaatatcatc 375 |||||||||||||||||||| Sbjct: 688 tcaagagcacaaatatcatc 707 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,186,937 Number of Sequences: 3902068 Number of extensions: 5186937 Number of successful extensions: 87360 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 69 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 87057 Number of HSP's gapped (non-prelim): 303 length of query: 641 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 618 effective length of database: 17,143,297,704 effective search space: 10594557981072 effective search space used: 10594557981072 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)