ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags31d15 |
|---|---|
| Clone Library Name | barley_pub |
>VA0D2_ARATH (Q9LHA4) Probable vacuolar ATP synthase subunit d 2 (EC 3.6.3.14)| (V-ATPase d subunit 2) (Vacuolar proton pump d subunit 2) Length = 351 Score = 222 bits (565), Expect = 7e-58 Identities = 102/117 (87%), Positives = 115/117 (98%) Frame = -3 Query: 594 DDRRKLYSNFGLLFPYGHEELAVCEDVDQVRGVMEKYPPYQSIFAKISYGESQMLDKAFY 415 +DR+KLYSNFGLL+PYGHEELA+CED+DQVRGVMEKYPPYQ+IF+K+SYGESQMLDKAFY Sbjct: 235 EDRKKLYSNFGLLYPYGHEELAICEDIDQVRGVMEKYPPYQAIFSKMSYGESQMLDKAFY 294 Query: 414 EEEVKRLRLSFEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKNRVHDSVVTIF 244 EEEV+RL L+FEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQK+R+HDSVV +F Sbjct: 295 EEEVRRLCLAFEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKSRIHDSVVYMF 351
>VA0D1_ARATH (Q9LJI5) Probable vacuolar ATP synthase subunit d 1 (EC 3.6.3.14)| (V-ATPase d subunit 1) (Vacuolar proton pump d subunit 1) Length = 351 Score = 222 bits (565), Expect = 7e-58 Identities = 102/117 (87%), Positives = 115/117 (98%) Frame = -3 Query: 594 DDRRKLYSNFGLLFPYGHEELAVCEDVDQVRGVMEKYPPYQSIFAKISYGESQMLDKAFY 415 +DR+KLYSNFGLL+PYGHEELA+CED+DQVRGVMEKYPPYQ+IF+K+SYGESQMLDKAFY Sbjct: 235 EDRKKLYSNFGLLYPYGHEELAICEDIDQVRGVMEKYPPYQAIFSKMSYGESQMLDKAFY 294 Query: 414 EEEVKRLRLSFEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKNRVHDSVVTIF 244 EEEV+RL L+FEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQK+R+HDSVV +F Sbjct: 295 EEEVRRLCLAFEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKSRIHDSVVYMF 351
>VA0D_DICDI (P54641) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 41 kDa accessory protein) (DVA41) Length = 356 Score = 119 bits (297), Expect = 9e-27 Identities = 53/113 (46%), Positives = 80/113 (70%) Frame = -3 Query: 594 DDRRKLYSNFGLLFPYGHEELAVCEDVDQVRGVMEKYPPYQSIFAKISYGESQMLDKAFY 415 DDR KLY + GLL+P G +L EDVDQVRG++E Y Y++ F+ + L+ +F+ Sbjct: 242 DDREKLYPSLGLLYPEGTSKLGKAEDVDQVRGILEVYSTYRNFFSD-GVNNEKSLEDSFF 300 Query: 414 EEEVKRLRLSFEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKNRVHDSV 256 E EV R++FE Q+ Y VF+AY++LREQEIRN++WI+EC++QN K +++ + Sbjct: 301 EHEVHLNRMAFEDQYGYGVFYAYIKLREQEIRNIVWIAECISQNMKQKMNQYI 353
>VA0D1_DROME (Q9W4P5) Vacuolar ATP synthase subunit d 1 (EC 3.6.3.14) (V-ATPase| d subunit 1) (Vacuolar proton pump d subunit 1) (V-ATPase 39 kDa subunit 1) Length = 350 Score = 100 bits (249), Expect = 3e-21 Identities = 53/119 (44%), Positives = 79/119 (66%), Gaps = 2/119 (1%) Frame = -3 Query: 594 DDRRKLYSNFGLLFPYGHEELAVCEDVDQVRGVMEKYPPYQSIF--AKISYGESQMLDKA 421 DDR KLY N G ++P G LA +D +QV+ V E Y Y ++F + + G+ + DK Sbjct: 234 DDRAKLYPNCGKMYPDGLAALARADDYEQVKTVAEYYAEYAALFDGSGNNPGDKTLEDK- 292 Query: 420 FYEEEVKRLRLSFEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKNRVHDSVVTIF 244 F+E EVK +F QQFH+ VF+AY++L+EQE RN++WI+ECVAQ + ++ D+ + IF Sbjct: 293 FFEHEVKLDVYAFLQQFHFGVFYAYLKLKEQECRNIVWIAECVAQKHRAKI-DNYIPIF 350
>VA0D_PONPY (Q5R6I1) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) Length = 351 Score = 100 bits (249), Expect = 3e-21 Identities = 49/119 (41%), Positives = 82/119 (68%), Gaps = 2/119 (1%) Frame = -3 Query: 594 DDRRKLYSNFGLLFPYGHEELAVCEDVDQVRGVMEKYPPYQSIF--AKISYGESQMLDKA 421 +DR KL+ + G L+P G +LA +D +QV+ V + YP Y+ +F A + G+ + D+ Sbjct: 235 EDRAKLFPHCGRLYPEGLAQLARADDYEQVKNVADYYPEYKLLFEGAGSNPGDKTLEDR- 293 Query: 420 FYEEEVKRLRLSFEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKNRVHDSVVTIF 244 F+E EVK +L+F QFH+ VF+A+++L+EQE RN++WI+EC+AQ + ++ D+ + IF Sbjct: 294 FFEHEVKLNKLAFLNQFHFGVFYAFVKLKEQECRNIVWIAECIAQRHRAKI-DNYIPIF 351
>VA0D_MOUSE (P51863) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase AC39 subunit) (V-ATPase 40 kDa accessory protein) (P39) (Physophilin) Length = 351 Score = 100 bits (249), Expect = 3e-21 Identities = 49/119 (41%), Positives = 82/119 (68%), Gaps = 2/119 (1%) Frame = -3 Query: 594 DDRRKLYSNFGLLFPYGHEELAVCEDVDQVRGVMEKYPPYQSIF--AKISYGESQMLDKA 421 +DR KL+ + G L+P G +LA +D +QV+ V + YP Y+ +F A + G+ + D+ Sbjct: 235 EDRAKLFPHCGRLYPEGLAQLARADDYEQVKNVADYYPEYKLLFEGAGSNPGDKTLEDR- 293 Query: 420 FYEEEVKRLRLSFEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKNRVHDSVVTIF 244 F+E EVK +L+F QFH+ VF+A+++L+EQE RN++WI+EC+AQ + ++ D+ + IF Sbjct: 294 FFEHEVKLNKLAFLNQFHFGVFYAFVKLKEQECRNIVWIAECIAQRHRAKI-DNYIPIF 351
>VA0D_HUMAN (P61421) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase AC39 subunit) (V-ATPase 40 kDa accessory protein) (P39) (32 kDa accessory protein) Length = 351 Score = 100 bits (249), Expect = 3e-21 Identities = 49/119 (41%), Positives = 82/119 (68%), Gaps = 2/119 (1%) Frame = -3 Query: 594 DDRRKLYSNFGLLFPYGHEELAVCEDVDQVRGVMEKYPPYQSIF--AKISYGESQMLDKA 421 +DR KL+ + G L+P G +LA +D +QV+ V + YP Y+ +F A + G+ + D+ Sbjct: 235 EDRAKLFPHCGRLYPEGLAQLARADDYEQVKNVADYYPEYKLLFEGAGSNPGDKTLEDR- 293 Query: 420 FYEEEVKRLRLSFEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKNRVHDSVVTIF 244 F+E EVK +L+F QFH+ VF+A+++L+EQE RN++WI+EC+AQ + ++ D+ + IF Sbjct: 294 FFEHEVKLNKLAFLNQFHFGVFYAFVKLKEQECRNIVWIAECIAQRHRAKI-DNYIPIF 351
>VA0D_BOVIN (P61420) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase AC39 subunit) (V-ATPase 40 kDa accessory protein) (P39) (32 kDa accessory protein) Length = 351 Score = 100 bits (249), Expect = 3e-21 Identities = 49/119 (41%), Positives = 82/119 (68%), Gaps = 2/119 (1%) Frame = -3 Query: 594 DDRRKLYSNFGLLFPYGHEELAVCEDVDQVRGVMEKYPPYQSIF--AKISYGESQMLDKA 421 +DR KL+ + G L+P G +LA +D +QV+ V + YP Y+ +F A + G+ + D+ Sbjct: 235 EDRAKLFPHCGRLYPEGLAQLARADDYEQVKNVADYYPEYKLLFEGAGSNPGDKTLEDR- 293 Query: 420 FYEEEVKRLRLSFEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKNRVHDSVVTIF 244 F+E EVK +L+F QFH+ VF+A+++L+EQE RN++WI+EC+AQ + ++ D+ + IF Sbjct: 294 FFEHEVKLNKLAFLNQFHFGVFYAFVKLKEQECRNIVWIAECIAQRHRAKI-DNYIPIF 351
>VA0D_NEUCR (P53659) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 41 kDa subunit) Length = 364 Score = 99.0 bits (245), Expect = 9e-21 Identities = 49/126 (38%), Positives = 78/126 (61%), Gaps = 14/126 (11%) Frame = -3 Query: 591 DRRKLYSNFGLLFPYGHEELAVCEDVDQVRGVMEKYPPYQSIFAKISYG----------- 445 DR+KLY NFG L+P G L+ +D + VR +E Y+S F G Sbjct: 236 DRKKLYPNFGQLYPEGTLMLSRADDFEGVRLAVEGVADYKSFFDAAGLGGGPSGPGNMGG 295 Query: 444 ---ESQMLDKAFYEEEVKRLRLSFEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKN 274 E + L+ FY++E++ +++F +QF YA+ +A+++LREQEIRN+ WI+EC+AQNQK Sbjct: 296 GGTEGKSLEDMFYQKEMEISKMAFTRQFTYAIVYAWVKLREQEIRNITWIAECIAQNQKE 355 Query: 273 RVHDSV 256 R+++ + Sbjct: 356 RINNYI 361
>VA0D_MANSE (Q25531) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 40 kDa subunit) (M40) Length = 348 Score = 97.4 bits (241), Expect = 3e-20 Identities = 53/119 (44%), Positives = 76/119 (63%), Gaps = 2/119 (1%) Frame = -3 Query: 594 DDRRKLYSNFGLLFPYGHEELAVCEDVDQVRGVMEKYPPYQSIF--AKISYGESQMLDKA 421 DDR KLY G L P G LA +D +QV+ V E Y Y ++F A + G+ + DK Sbjct: 232 DDRAKLYPRCGKLNPDGLAALARADDYEQVKAVAEYYAEYSALFEGAGNNVGDKTLEDK- 290 Query: 420 FYEEEVKRLRLSFEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKNRVHDSVVTIF 244 F+E EV +F QQFH+ VF++Y++L+EQE RN++WISECVAQ + ++ D+ + IF Sbjct: 291 FFEHEVNLNVHAFLQQFHFGVFYSYLKLKEQECRNIVWISECVAQKHRAKI-DNYIPIF 348
>VA0D_SCHPO (O13753) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 39 kDa subunit) (V-ATPase subunit M39) Length = 343 Score = 93.2 bits (230), Expect = 5e-19 Identities = 45/108 (41%), Positives = 68/108 (62%) Frame = -3 Query: 594 DDRRKLYSNFGLLFPYGHEELAVCEDVDQVRGVMEKYPPYQSIFAKISYGESQMLDKAFY 415 ++R K+Y +FG L+P+ LA E+ V Y F + S + LD F Sbjct: 231 EERAKMYPSFGRLYPFSTSILARAENAGDVENACSLVKEYSDFFDQNS---QKSLDDHFN 287 Query: 414 EEEVKRLRLSFEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKNR 271 E+EV+ +L+F QQFHY + +A+++LREQEIRNL WI+EC++QNQ++R Sbjct: 288 EKEVELNKLAFLQQFHYGIVYAFLKLREQEIRNLTWIAECISQNQRDR 335
>VA0D_YEAST (P32366) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 39 kDa subunit) (V-ATPase subunit M39) Length = 345 Score = 74.7 bits (182), Expect = 2e-13 Identities = 38/113 (33%), Positives = 64/113 (56%) Frame = -3 Query: 594 DDRRKLYSNFGLLFPYGHEELAVCEDVDQVRGVMEKYPPYQSIFAKISYGESQMLDKAFY 415 D + L N G L+P LA +D + VR + Y+ E+ L+ FY Sbjct: 236 DLKSDLLPNIGKLYPLATFHLAQAQDFEGVRAALANVYEYRGFL------ETGNLEDHFY 289 Query: 414 EEEVKRLRLSFEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKNRVHDSV 256 + E++ R +F QQF + +A+M+ +EQE+RN+ WI+EC+AQNQ+ R+++ + Sbjct: 290 QLEMELCRDAFTQQFAISTVWAWMKSKEQEVRNITWIAECIAQNQRERINNYI 342
>VA0D2_DROME (Q9VCQ3) Probable vacuolar ATP synthase subunit d 2 (EC 3.6.3.14)| (V-ATPase d subunit 2) (Vacuolar proton pump d subunit 2) (V-ATPase 39 kDa subunit 2) Length = 350 Score = 72.4 bits (176), Expect = 9e-13 Identities = 33/111 (29%), Positives = 63/111 (56%), Gaps = 2/111 (1%) Frame = -3 Query: 591 DRRKLYSNFGLLFPYGHEELAVCEDVDQVRGVMEKYPPYQSIFAKISYGESQM--LDKAF 418 +R K++ G L ++ D D++R V + Y +F + M L+ F Sbjct: 232 ERLKMFPTCGYLPKIALASMSTLNDTDKIRDVCNVFDGYGKMFDNLERDSDGMITLEDRF 291 Query: 417 YEEEVKRLRLSFEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKNRVH 265 E K+ +F QQ+H+ +F+++++L++ E+RN++WISEC+AQ Q +R++ Sbjct: 292 LMMEAKKNVQTFLQQYHFGIFYSFIKLKQLEVRNIVWISECIAQRQTDRIN 342
>HMCT_BOMMO (P98092) Hemocytin precursor (Humoral lectin)| Length = 3133 Score = 32.3 bits (72), Expect = 1.1 Identities = 18/56 (32%), Positives = 25/56 (44%) Frame = +3 Query: 264 HGPCSSGSGQRIRRSTSSSLSPALVASCTQRKQHSGTAVRMTGAASLLPPHRRPCP 431 HG C SG+ + T S C Q ++SG +VR+T + PHR P Sbjct: 3017 HGSCDSGTIYNNQTGTHES-----ACECCQAAKYSGVSVRLTCEDGTVRPHRVATP 3067
>LMO6_HUMAN (O43900) LIM domain only protein 6 (Triple LIM domain protein 6)| Length = 615 Score = 30.0 bits (66), Expect = 5.3 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Frame = +3 Query: 243 KRSSRRCHGPCSSGSGQRIRRSTSSSLSPALVASCTQRKQHSGTAVRMTGAASLLPPHR- 419 + SRR H C +GSG S S S S + +S ++ + G G LPPH Sbjct: 524 RHPSRRRHYQCDAGSG-----SDSESCSSSPSSSSSESSEDDGF---FLGERIPLPPHLC 575 Query: 420 RPCPTSD 440 RP P D Sbjct: 576 RPMPAQD 582
>Y3550_ARATH (Q9MA63) Protein At3g05500| Length = 246 Score = 29.6 bits (65), Expect = 6.9 Identities = 18/72 (25%), Positives = 35/72 (48%) Frame = +1 Query: 160 ELIKSAIDCAIIKAGLLYSHMHSNRGRLKDRHDAVMDPVLLVLGNAFGDPHQVPYLLLS* 339 + +++A A+++ L+Y+ G LK ++V V V+G + H VP +L Sbjct: 26 QFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEGAVKTVVGPVYEKYHDVPVEVLKY 85 Query: 340 PHVRKENSIVEL 375 + + S+ EL Sbjct: 86 MDQKVDMSVTEL 97
>TUP1_YEAST (P16649) Glucose repression regulatory protein TUP1 (Flocculation| suppressor protein) (Repressor AER2) Length = 713 Score = 29.6 bits (65), Expect = 6.9 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -3 Query: 426 KAFYEEEVKRLRLSFEQQFHYAVFFAYMRLREQE 325 K YEEE+K L+L EQ+ H + R+Q+ Sbjct: 70 KDAYEEEIKHLKLGLEQRDHQIASLTVQQQRQQQ 103
>IRAK1_HUMAN (P51617) Interleukin-1 receptor-associated kinase 1 (EC 2.7.11.1)| (IRAK-1) Length = 712 Score = 29.3 bits (64), Expect = 9.0 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Frame = +3 Query: 285 SGQRIRRSTSSSLSPALVASCTQRKQHSGTAVRMTGA-ASLLPPHRRPCPTSDFP 446 S +++ S S+ LSPA S T HSG + + + ASL PP P P+S P Sbjct: 131 SPRKLPSSASTFLSPAFPGSQT----HSGPELGLVPSPASLWPPPPSPAPSSTKP 181
>MET2_ASCIM (P12917) Homoserine O-acetyltransferase (EC 2.3.1.31) (Homoserine| O-trans-acetylase) Length = 518 Score = 29.3 bits (64), Expect = 9.0 Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 4/68 (5%) Frame = +3 Query: 243 KRSSRRCHGPCSSGSGQRIRRSTSSSLSPALVASCT----QRKQHSGTAVRMTGAASLLP 410 ++ RR S R S++SS AS T R Q SG A + Sbjct: 305 RKGFRRSSTTTSDAPPSPTRTSSTSSTDAITPASTTPLHPSRAQPSGIATPPNSVSDPFR 364 Query: 411 PHRRPCPT 434 P +RPCPT Sbjct: 365 PVKRPCPT 372
>ROBO3_MOUSE (Q9Z2I4) Roundabout homolog 3 precursor (Retinoblastoma-inhibiting| gene 1) (Rig-1) Length = 1366 Score = 29.3 bits (64), Expect = 9.0 Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 1/80 (1%) Frame = +3 Query: 312 SSSLSPALVASCTQRKQHSGTAVRMTGAASLLP-PHRRPCPTSDFPHMISLQK*TGMGGT 488 SSS +VA + ++ A+L P P P P +D PH+ + + +G + Sbjct: 1126 SSSSGACMVAPAPRDTPSPTSSYGQQSTATLTPSPPDPPQPPTDIPHLHQMPRRVPLGPS 1185 Query: 489 SPLHHAPGQHLHRQPTLHDH 548 SPL + QP L H Sbjct: 1186 SPLSVS-------QPALSSH 1198 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 93,404,557 Number of Sequences: 219361 Number of extensions: 2046399 Number of successful extensions: 5200 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 4990 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5185 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5196311029 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
