ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags31d15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_192544.1| Oryza sativa (japonica cultivar-group), predic... 381 e-102
2dbj|AK067605.1| Oryza sativa (japonica cultivar-group) cDNA clon... 381 e-102
3gb|AY104603.1| Zea mays PCO113315 mRNA sequence 331 2e-87
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 151 3e-33
5dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic D... 151 3e-33
6gb|AY843525.1| Ammopiptanthus mongolicus clone N10G17 cold-induc... 100 1e-17
7gb|BT012808.1| Lycopersicon esculentum clone 113828F, mRNA sequence 100 1e-17
8ref|NM_113791.2| Arabidopsis thaliana hydrogen-transporting ATP ... 98 4e-17
9gb|AY142622.1| Arabidopsis thaliana putative adenosine triphosph... 98 4e-17
10gb|AF327534.1| Arabidopsis thaliana putative adenosine triphosph... 98 4e-17
11gb|AY077656.1| Arabidopsis thaliana AT3g28710/MZN14_20 mRNA, com... 98 4e-17
12gb|AY039864.1| Arabidopsis thaliana AT3g28710/MZN14_20 mRNA, com... 98 4e-17
13gb|AF324679.2|AF324679 Arabidopsis thaliana AT3g28710 (AT3g28710... 98 4e-17
14gb|AY089082.1| Arabidopsis thaliana clone 29760 mRNA, complete s... 98 4e-17
15ref|NM_113792.1| Arabidopsis thaliana hydrogen-transporting ATP ... 94 6e-16
16gb|BT000154.1| Arabidopsis thaliana Unknown protein (At3g28715) ... 94 6e-16
17gb|AY062635.1| Arabidopsis thaliana Unknown protein mRNA, comple... 94 6e-16
18gb|AF428348.1|AF428348 Arabidopsis thaliana AT3g28715/MZN14_21 m... 94 6e-16
19dbj|AP000420.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 94 6e-16
20gb|AC155348.1| Brassica rapa subsp. pekinensis chromosome Cytoge... 80 9e-12
21gb|AC137994.19| Medicago truncatula clone mth2-23f15, complete s... 76 1e-10
22gb|AC169177.4| Medicago truncatula chromosome 7 BAC clone mth2-1... 76 1e-10
23gb|AC157893.2| Medicago truncatula chromosome 7 BAC clone mth2-7... 66 1e-07
24emb|BX001018.11| Zebrafish DNA sequence from clone DKEY-11D22, c... 46 0.13
25gb|AC147124.2| Mus musculus BAC clone RP24-163K4 from chromosome... 44 0.52
26gb|AC125226.3| Mus musculus BAC clone RP23-39D21 from 7, complet... 44 0.52
27emb|AL157897.8| Human DNA sequence from clone RP11-8D22 on chrom... 44 0.52
28emb|BX322575.19| Zebrafish DNA sequence from clone CH211-283E2 i... 42 2.1
29gb|AF186190.4| Homo sapiens chromosome 8 clone CTC-369M3 map 8q2... 42 2.1
30dbj|D00313.1|YS2PEP1 Saccharomycopsis fibuligera PEP1 gene for p... 42 2.1
31gb|AF022647.1| Fusobacterium nucleatum plasmid pPA52, complete s... 40 8.1
32gb|AF159249.1| Fusobacterium nucleatum plasmid pFN1, complete se... 40 8.1
33gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.1
34gb|AE017199.1| Nanoarchaeum equitans Kin4-M, complete genome 40 8.1
35gb|AC132388.3| Mus musculus BAC clone RP23-443H3 from chromosome... 40 8.1
36gb|AC072028.14| Homo sapiens 3 BAC RP11-190C21 (Roswell Park Can... 40 8.1
37gb|AC124370.3| Mus musculus BAC clone RP24-554F1 from chromosome... 40 8.1
38ref|XM_648131.1| Entamoeba histolytica HM-1:IMSS conserved hypot... 40 8.1
39gb|AC183832.3| Pan troglodytes BAC clone CH251-260G12 from chrom... 40 8.1
40emb|AL359920.15| Human DNA sequence from clone RP11-359P14 on ch... 40 8.1
41gb|AC092943.5| Homo sapiens 3 BAC RP11-564C24 (Roswell Park Canc... 40 8.1
42emb|AL844182.10| Mouse DNA sequence from clone RP23-399H17 on ch... 40 8.1
43emb|CR385068.11| Zebrafish DNA sequence from clone CH211-245H7 i... 40 8.1
44gb|AC091966.3| Homo sapiens chromosome 5 clone RP11-489E3, compl... 40 8.1
45gb|AC091799.5| Homo sapiens BAC clone RP11-416N13 from 7, comple... 40 8.1
46gb|CP000237.1| Neorickettsia sennetsu strain Miyayama, complete ... 40 8.1
47gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome 40 8.1
48dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
49dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
50gb|AC146468.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.1
51gb|AC011005.7|AC011005 Homo sapiens chromosome 7 clone RP11-286H... 40 8.1
52gb|AC083866.2|AC083866 Homo sapiens chromosome 7 clone RP11-702D... 40 8.1
53gb|AC069151.6| Homo sapiens BAC clone RP11-236I9 from 2, complet... 40 8.1
54dbj|AP003763.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
55dbj|AP003619.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
56dbj|AB024028.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 8.1
57emb|CT967325.1| Zebrafish DNA sequence from clone DKEY-25K11, co... 40 8.1
58emb|AL935332.12| Zebrafish DNA sequence from clone DKEY-77F17 in... 40 8.1
59emb|CT010505.18| Mouse DNA sequence from clone RP23-99P18 on chr... 40 8.1
60emb|BX001015.5| Zebrafish DNA sequence from clone CH211-261D18 i... 40 8.1
61emb|CT573078.1| Medicago truncatula chromosome 5 clone mte1-4f8,... 40 8.1 
>ref|NM_192544.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1056

 Score =  381 bits (192), Expect = e-102
 Identities = 303/340 (89%)
 Strand = Plus / Minus

                                                                        
Query: 257  acgctgtcatggaccctgttcttctggttctgggcaacgcattcggagatccacatcaag 316
            |||||||| ||||||||||||||||| ||||| ||||| || || || ||||||||||||
Sbjct: 1040 acgctgtcgtggaccctgttcttctgattctgcgcaacacactctgatatccacatcaag 981

                                                                        
Query: 317  ttccttatctcctgctctcgtagcctcatgtacgcaaagaaaacagcatagtggaactgc 376
            ||||| ||||||||||| |||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 980  ttcctaatctcctgctcccgtagccttatgtaagcaaagaaaacagcatagtggaactgc 921

                                                                        
Query: 377  tgttcgaatgacaggcgcagcctctttacttcctcctcatagaaggccttgtccaacatc 436
            ||||| ||||||| || |||||||   ||||||||||||||||||||||| |||||||| 
Sbjct: 920  tgttcaaatgacaagcacagcctccgcacttcctcctcatagaaggccttatccaacatt 861

                                                                        
Query: 437  tgactttccccatatgatatctttgcaaaaatagactggtatggggggtacttctccatt 496
            || ||||||||||| || || || |||||||||| ||||||||| |||||||||||||||
Sbjct: 860  tggctttccccatacgaaattttggcaaaaatagcctggtatggagggtacttctccatt 801

                                                                        
Query: 497  acaccacgcacctggtcaacatcttcacagacagccaactcttcatgaccatatggaaac 556
            |||||||| ||||| |||||||||||||| |||||||  |||||||||||||||||| ||
Sbjct: 800  acaccacggacctgatcaacatcttcacaaacagccagttcttcatgaccatatggatac 741

                                                    
Query: 557  aatagaccgaaattggagtacagcttcctgcggtcatctc 596
            |||| ||| || ||||||||||||||||  ||||||||||
Sbjct: 740  aataaaccaaagttggagtacagcttccgacggtcatctc 701
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>dbj|AK067605.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111L13, full
            insert sequence
          Length = 1556

 Score =  381 bits (192), Expect = e-102
 Identities = 303/340 (89%)
 Strand = Plus / Minus

                                                                        
Query: 257  acgctgtcatggaccctgttcttctggttctgggcaacgcattcggagatccacatcaag 316
            |||||||| ||||||||||||||||| ||||| ||||| || || || ||||||||||||
Sbjct: 1156 acgctgtcgtggaccctgttcttctgattctgcgcaacacactctgatatccacatcaag 1097

                                                                        
Query: 317  ttccttatctcctgctctcgtagcctcatgtacgcaaagaaaacagcatagtggaactgc 376
            ||||| ||||||||||| |||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 1096 ttcctaatctcctgctcccgtagccttatgtaagcaaagaaaacagcatagtggaactgc 1037

                                                                        
Query: 377  tgttcgaatgacaggcgcagcctctttacttcctcctcatagaaggccttgtccaacatc 436
            ||||| ||||||| || |||||||   ||||||||||||||||||||||| |||||||| 
Sbjct: 1036 tgttcaaatgacaagcacagcctccgcacttcctcctcatagaaggccttatccaacatt 977

                                                                        
Query: 437  tgactttccccatatgatatctttgcaaaaatagactggtatggggggtacttctccatt 496
            || ||||||||||| || || || |||||||||| ||||||||| |||||||||||||||
Sbjct: 976  tggctttccccatacgaaattttggcaaaaatagcctggtatggagggtacttctccatt 917

                                                                        
Query: 497  acaccacgcacctggtcaacatcttcacagacagccaactcttcatgaccatatggaaac 556
            |||||||| ||||| |||||||||||||| |||||||  |||||||||||||||||| ||
Sbjct: 916  acaccacggacctgatcaacatcttcacaaacagccagttcttcatgaccatatggatac 857

                                                    
Query: 557  aatagaccgaaattggagtacagcttcctgcggtcatctc 596
            |||| ||| || ||||||||||||||||  ||||||||||
Sbjct: 856  aataaaccaaagttggagtacagcttccgacggtcatctc 817



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 180  cgattgtgccatcatcaaagcgggccttttgtacagccat 219
            ||||||||||||||||||| | ||| ||||||||| ||||
Sbjct: 1233 cgattgtgccatcatcaaacctggcattttgtacaaccat 1194
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>gb|AY104603.1| Zea mays PCO113315 mRNA sequence
          Length = 1601

 Score =  331 bits (167), Expect = 2e-87
 Identities = 299/343 (87%)
 Strand = Plus / Minus

                                                                        
Query: 254  acgacgctgtcatggaccctgttcttctggttctgggcaacgcattcggagatccacatc 313
            ||||| ||||||||||||| |  |||||||||||| || || ||||| ||||||||||||
Sbjct: 1259 acgacactgtcatggacccgggacttctggttctgagcgacacattcagagatccacatc 1200

                                                                        
Query: 314  aagttccttatctcctgctctcgtagcctcatgtacgcaaagaaaacagcatagtggaac 373
            | |||||| ||||||||||| || ||||| ||||| || ||||||||||| |||||||||
Sbjct: 1199 aggttcctgatctcctgctcgcggagcctgatgtaagcgaagaaaacagcgtagtggaac 1140

                                                                        
Query: 374  tgctgttcgaatgacaggcgcagcctctttacttcctcctcatagaaggccttgtccaac 433
            ||||| || || |||| ||  |||||||| |||||||||||||| || ||||| ||||||
Sbjct: 1139 tgctgctcaaaggacaagcatagcctcttgacttcctcctcataaaatgccttatccaac 1080

                                                                        
Query: 434  atctgactttccccatatgatatctttgcaaaaatagactggtatggggggtacttctcc 493
            ||||||||||| |||||||| ||| | | ||| |||||||||||||| ||||||||||||
Sbjct: 1079 atctgactttctccatatgaaatcctggaaaatatagactggtatggtgggtacttctcc 1020

                                                                        
Query: 494  attacaccacgcacctggtcaacatcttcacagacagccaactcttcatgaccatatgga 553
            ||| ||||||| |||||||||||||||||||| || ||||| ||||| || |||||||||
Sbjct: 1019 attgcaccacgaacctggtcaacatcttcacaaacggccaattcttcgtggccatatgga 960

                                                       
Query: 554  aacaatagaccgaaattggagtacagcttcctgcggtcatctc 596
             |||||| ||| || ||||||||||||||||||||||||||||
Sbjct: 959  tacaataaaccaaagttggagtacagcttcctgcggtcatctc 917



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 180  cgattgtgccatcatcaaagcgggccttttgtaca 214
            ||||||||||||||||||||| ||| |||||||||
Sbjct: 1330 cgattgtgccatcatcaaagcaggcattttgtaca 1296
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  151 bits (76), Expect = 3e-33
 Identities = 109/120 (90%)
 Strand = Plus / Plus

                                                                            
Query: 257      acgctgtcatggaccctgttcttctggttctgggcaacgcattcggagatccacatcaag 316
                |||||||| ||||||||||||||||| ||||| ||||| || || || ||||||||||||
Sbjct: 22852025 acgctgtcgtggaccctgttcttctgattctgcgcaacacactctgatatccacatcaag 22852084

                                                                            
Query: 317      ttccttatctcctgctctcgtagcctcatgtacgcaaagaaaacagcatagtggaactgc 376
                ||||| ||||||||||| |||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 22852085 ttcctaatctcctgctcccgtagccttatgtaagcaaagaaaacagcatagtggaactgc 22852144



 Score =  145 bits (73), Expect = 2e-31
 Identities = 121/137 (88%)
 Strand = Plus / Plus

                                                                            
Query: 373      ctgctgttcgaatgacaggcgcagcctctttacttcctcctcatagaaggccttgtccaa 432
                ||||||||| ||||||| || |||||||   ||||||||||||||||||||||| |||||
Sbjct: 22852686 ctgctgttcaaatgacaagcacagcctccgcacttcctcctcatagaaggccttatccaa 22852745

                                                                            
Query: 433      catctgactttccccatatgatatctttgcaaaaatagactggtatggggggtacttctc 492
                ||| || ||||||||||| || || || |||||||||| ||||||||| |||||||||||
Sbjct: 22852746 catttggctttccccatacgaaattttggcaaaaatagcctggtatggagggtacttctc 22852805

                                 
Query: 493      cattacaccacgcacct 509
                |||||||||||| ||||
Sbjct: 22852806 cattacaccacggacct 22852822



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                                
Query: 506      acctggtcaacatcttcacagacagccaactcttcatgaccatatgga 553
                ||||| |||||||||||||| |||||||  ||||||||||||||||||
Sbjct: 22853737 acctgatcaacatcttcacaaacagccagttcttcatgaccatatgga 22853784



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                        
Query: 180      cgattgtgccatcatcaaagcgggccttttgtacagccat 219
                ||||||||||||||||||| | ||| ||||||||| ||||
Sbjct: 22851948 cgattgtgccatcatcaaacctggcattttgtacaaccat 22851987



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                          
Query: 555      acaatagaccgaaattggagtacagcttcctgcggtcatctc 596
                |||||| ||| || ||||||||||||||||  ||||||||||
Sbjct: 22853861 acaataaaccaaagttggagtacagcttccgacggtcatctc 22853902
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>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0700A11
          Length = 136321

 Score =  151 bits (76), Expect = 3e-33
 Identities = 109/120 (90%)
 Strand = Plus / Plus

                                                                         
Query: 257   acgctgtcatggaccctgttcttctggttctgggcaacgcattcggagatccacatcaag 316
             |||||||| ||||||||||||||||| ||||| ||||| || || || ||||||||||||
Sbjct: 55582 acgctgtcgtggaccctgttcttctgattctgcgcaacacactctgatatccacatcaag 55641

                                                                         
Query: 317   ttccttatctcctgctctcgtagcctcatgtacgcaaagaaaacagcatagtggaactgc 376
             ||||| ||||||||||| |||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 55642 ttcctaatctcctgctcccgtagccttatgtaagcaaagaaaacagcatagtggaactgc 55701



 Score =  145 bits (73), Expect = 2e-31
 Identities = 121/137 (88%)
 Strand = Plus / Plus

                                                                         
Query: 373   ctgctgttcgaatgacaggcgcagcctctttacttcctcctcatagaaggccttgtccaa 432
             ||||||||| ||||||| || |||||||   ||||||||||||||||||||||| |||||
Sbjct: 56243 ctgctgttcaaatgacaagcacagcctccgcacttcctcctcatagaaggccttatccaa 56302

                                                                         
Query: 433   catctgactttccccatatgatatctttgcaaaaatagactggtatggggggtacttctc 492
             ||| || ||||||||||| || || || |||||||||| ||||||||| |||||||||||
Sbjct: 56303 catttggctttccccatacgaaattttggcaaaaatagcctggtatggagggtacttctc 56362

                              
Query: 493   cattacaccacgcacct 509
             |||||||||||| ||||
Sbjct: 56363 cattacaccacggacct 56379



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                             
Query: 506   acctggtcaacatcttcacagacagccaactcttcatgaccatatgga 553
             ||||| |||||||||||||| |||||||  ||||||||||||||||||
Sbjct: 57294 acctgatcaacatcttcacaaacagccagttcttcatgaccatatgga 57341



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 180   cgattgtgccatcatcaaagcgggccttttgtacagccat 219
             ||||||||||||||||||| | ||| ||||||||| ||||
Sbjct: 55505 cgattgtgccatcatcaaacctggcattttgtacaaccat 55544



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 555   acaatagaccgaaattggagtacagcttcctgcggtcatctc 596
             |||||| ||| || ||||||||||||||||  ||||||||||
Sbjct: 57418 acaataaaccaaagttggagtacagcttccgacggtcatctc 57459
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>gb|AY843525.1| Ammopiptanthus mongolicus clone N10G17 cold-induced mRNA
          Length = 453

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 140/170 (82%)
 Strand = Plus / Minus

                                                                       
Query: 260 ctgtcatggaccctgttcttctggttctgggcaacgcattcggagatccacatcaagttc 319
           |||||||| || |||  |||||| ||||| || |||||||| || |||||||| | ||||
Sbjct: 274 ctgtcatgaactctggacttctgattctgagccacgcattctgaaatccacattaggttc 215

                                                                       
Query: 320 cttatctcctgctctcgtagcctcatgtacgcaaagaaaacagcatagtggaactgctgt 379
           || ||||||||||| | ||||||||| || || ||||| |||||||| |||||||| || 
Sbjct: 214 ctgatctcctgctcccttagcctcatatatgcgaagaacacagcataatggaactgttgc 155

                                                             
Query: 380 tcgaatgacaggcgcagcctctttacttcctcctcatagaaggccttgtc 429
           || || | || ||  |||||||| || |||||||||||||| ||||||||
Sbjct: 154 tcaaacgccaagcaaagcctcttcacctcctcctcatagaatgccttgtc 105
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>gb|BT012808.1| Lycopersicon esculentum clone 113828F, mRNA sequence
          Length = 1534

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 266/338 (78%)
 Strand = Plus / Minus

                                                                        
Query: 257  acgctgtcatggaccctgttcttctggttctgggcaacgcattcggagatccacatcaag 316
            |||||||||||||| ||| | || |||||||| |  || ||||| || |||||||| | |
Sbjct: 1140 acgctgtcatggactctggttttttggttctgagagacacattcagaaatccacattagg 1081

                                                                        
Query: 317  ttccttatctcctgctctcgtagcctcatgtacgcaaagaaaacagcatagtggaactgc 376
            |||||||||||||||||||  ||||| || || |  || || ||| ||||||||||||| 
Sbjct: 1080 ttccttatctcctgctctctcagccttatatatgagaaaaatacaccatagtggaactgt 1021

                                                                        
Query: 377  tgttcgaatgacaggcgcagcctctttacttcctcctcatagaaggccttgtccaacatc 436
            ||||| || || | ||  || |  || |||||||| |||||||| |||||||| | ||||
Sbjct: 1020 tgttcaaaagataagcaaaggcgtttcacttcctcttcatagaaagccttgtcgagcatc 961

                                                                        
Query: 437  tgactttccccatatgatatctttgcaaaaatagactggtatggggggtacttctccatt 496
            || || ||||||||||| | ||| | ||| || || || || ||||||||||| ||||| 
Sbjct: 960  tggctctccccatatgacaacttagaaaatatggattgataaggggggtacttttccatg 901

                                                                        
Query: 497  acaccacgcacctggtcaacatcttcacagacagccaactcttcatgaccatatggaaac 556
            ||||| || ||||| || | ||||||||| |  || |  || |||||||| |||||  | 
Sbjct: 900  acaccgcggacctgatctatatcttcacatatggcaagttcctcatgaccgtatgggtaa 841

                                                  
Query: 557  aatagaccgaaattggagtacagcttcctgcggtcatc 594
            | ||  || ||||| ||||||| |||||||||||||||
Sbjct: 840  agtaatccaaaattagagtacaacttcctgcggtcatc 803
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>ref|NM_113791.2| Arabidopsis thaliana hydrogen-transporting ATP synthase, rotational
            mechanism / hydrogen-transporting ATPase, rotational
            mechanism AT3G28710 mRNA, complete cds
          Length = 1429

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 106/125 (84%)
 Strand = Plus / Minus

                                                                        
Query: 254  acgacgctgtcatggaccctgttcttctggttctgggcaacgcattcggagatccacatc 313
            ||||| ||||| |||| ||||  |||||||||||| ||||| ||||| || |||||||| 
Sbjct: 1176 acgacactgtcgtggatcctggacttctggttctgtgcaacacattcagatatccacata 1117

                                                                        
Query: 314  aagttccttatctcctgctctcgtagcctcatgtacgcaaagaaaacagcatagtggaac 373
            | |||||| ||||||||||||| || |||||| ||||||||||| || || || ||||||
Sbjct: 1116 aggttcctgatctcctgctctcttaacctcatatacgcaaagaataccgcgtaatggaac 1057

                 
Query: 374  tgctg 378
            |||||
Sbjct: 1056 tgctg 1052



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 76/92 (82%)
 Strand = Plus / Minus

                                                                       
Query: 488 ttctccattacaccacgcacctggtcaacatcttcacagacagccaactcttcatgacca 547
           |||||||| |||||||| |||||||| | ||| || |||| ||| | |||||| ||||||
Sbjct: 942 ttctccataacaccacgaacctggtctatatcctcgcagatagcaagctcttcgtgacca 883

                                           
Query: 548 tatggaaacaatagaccgaaattggagtacag 579
           |||||| | | |||||| || || ||||||||
Sbjct: 882 tatggatagagtagaccaaagttagagtacag 851
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>gb|AY142622.1| Arabidopsis thaliana putative adenosine triphosphatase (At3g28710)
            mRNA, complete cds
          Length = 1087

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 106/125 (84%)
 Strand = Plus / Minus

                                                                        
Query: 254  acgacgctgtcatggaccctgttcttctggttctgggcaacgcattcggagatccacatc 313
            ||||| ||||| |||| ||||  |||||||||||| ||||| ||||| || |||||||| 
Sbjct: 1043 acgacactgtcgtggatcctggacttctggttctgtgcaacacattcagatatccacata 984

                                                                        
Query: 314  aagttccttatctcctgctctcgtagcctcatgtacgcaaagaaaacagcatagtggaac 373
            | |||||| ||||||||||||| || |||||| ||||||||||| || || || ||||||
Sbjct: 983  aggttcctgatctcctgctctcttaacctcatatacgcaaagaataccgcgtaatggaac 924

                 
Query: 374  tgctg 378
            |||||
Sbjct: 923  tgctg 919



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 76/92 (82%)
 Strand = Plus / Minus

                                                                       
Query: 488 ttctccattacaccacgcacctggtcaacatcttcacagacagccaactcttcatgacca 547
           |||||||| |||||||| |||||||| | ||| || |||| ||| | |||||| ||||||
Sbjct: 809 ttctccataacaccacgaacctggtctatatcctcgcagatagcaagctcttcgtgacca 750

                                           
Query: 548 tatggaaacaatagaccgaaattggagtacag 579
           |||||| | | |||||| || || ||||||||
Sbjct: 749 tatggatagagtagaccaaagttagagtacag 718
to top
>gb|AF327534.1| Arabidopsis thaliana putative adenosine triphosphatase (At3g28710)
            mRNA, complete cds
          Length = 1421

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 106/125 (84%)
 Strand = Plus / Minus

                                                                        
Query: 254  acgacgctgtcatggaccctgttcttctggttctgggcaacgcattcggagatccacatc 313
            ||||| ||||| |||| ||||  |||||||||||| ||||| ||||| || |||||||| 
Sbjct: 1159 acgacactgtcgtggatcctggacttctggttctgtgcaacacattcagatatccacata 1100

                                                                        
Query: 314  aagttccttatctcctgctctcgtagcctcatgtacgcaaagaaaacagcatagtggaac 373
            | |||||| ||||||||||||| || |||||| ||||||||||| || || || ||||||
Sbjct: 1099 aggttcctgatctcctgctctcttaacctcatatacgcaaagaataccgcgtaatggaac 1040

                 
Query: 374  tgctg 378
            |||||
Sbjct: 1039 tgctg 1035



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 76/92 (82%)
 Strand = Plus / Minus

                                                                       
Query: 488 ttctccattacaccacgcacctggtcaacatcttcacagacagccaactcttcatgacca 547
           |||||||| |||||||| |||||||| | ||| || |||| ||| | |||||| ||||||
Sbjct: 925 ttctccataacaccacgaacctggtctatatcctcgcagatagcaagctcttcgtgacca 866

                                           
Query: 548 tatggaaacaatagaccgaaattggagtacag 579
           |||||| | | |||||| || || ||||||||
Sbjct: 865 tatggatagagtagaccaaagttagagtacag 834
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>gb|AY077656.1| Arabidopsis thaliana AT3g28710/MZN14_20 mRNA, complete cds
          Length = 1056

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 106/125 (84%)
 Strand = Plus / Minus

                                                                        
Query: 254  acgacgctgtcatggaccctgttcttctggttctgggcaacgcattcggagatccacatc 313
            ||||| ||||| |||| ||||  |||||||||||| ||||| ||||| || |||||||| 
Sbjct: 1043 acgacactgtcgtggatcctggacttctggttctgtgcaacacattcagatatccacata 984

                                                                        
Query: 314  aagttccttatctcctgctctcgtagcctcatgtacgcaaagaaaacagcatagtggaac 373
            | |||||| ||||||||||||| || |||||| ||||||||||| || || || ||||||
Sbjct: 983  aggttcctgatctcctgctctcttaacctcatatacgcaaagaataccgcgtaatggaac 924

                 
Query: 374  tgctg 378
            |||||
Sbjct: 923  tgctg 919



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 76/92 (82%)
 Strand = Plus / Minus

                                                                       
Query: 488 ttctccattacaccacgcacctggtcaacatcttcacagacagccaactcttcatgacca 547
           |||||||| |||||||| |||||||| | ||| || |||| ||| | |||||| ||||||
Sbjct: 809 ttctccataacaccacgaacctggtctatatcctcgcagatagcaagctcttcgtgacca 750

                                           
Query: 548 tatggaaacaatagaccgaaattggagtacag 579
           |||||| | | |||||| || || ||||||||
Sbjct: 749 tatggatagagtagaccaaagttagagtacag 718
to top
>gb|AY039864.1| Arabidopsis thaliana AT3g28710/MZN14_20 mRNA, complete cds
          Length = 1429

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 106/125 (84%)
 Strand = Plus / Minus

                                                                        
Query: 254  acgacgctgtcatggaccctgttcttctggttctgggcaacgcattcggagatccacatc 313
            ||||| ||||| |||| ||||  |||||||||||| ||||| ||||| || |||||||| 
Sbjct: 1176 acgacactgtcgtggatcctggacttctggttctgtgcaacacattcagatatccacata 1117

                                                                        
Query: 314  aagttccttatctcctgctctcgtagcctcatgtacgcaaagaaaacagcatagtggaac 373
            | |||||| ||||||||||||| || |||||| ||||||||||| || || || ||||||
Sbjct: 1116 aggttcctgatctcctgctctcttaacctcatatacgcaaagaataccgcgtaatggaac 1057

                 
Query: 374  tgctg 378
            |||||
Sbjct: 1056 tgctg 1052



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 76/92 (82%)
 Strand = Plus / Minus

                                                                       
Query: 488 ttctccattacaccacgcacctggtcaacatcttcacagacagccaactcttcatgacca 547
           |||||||| |||||||| |||||||| | ||| || |||| ||| | |||||| ||||||
Sbjct: 942 ttctccataacaccacgaacctggtctatatcctcgcagatagcaagctcttcgtgacca 883

                                           
Query: 548 tatggaaacaatagaccgaaattggagtacag 579
           |||||| | | |||||| || || ||||||||
Sbjct: 882 tatggatagagtagaccaaagttagagtacag 851
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>gb|AF324679.2|AF324679 Arabidopsis thaliana AT3g28710 (AT3g28710/MZN14_20) mRNA, complete
            cds
          Length = 1400

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 106/125 (84%)
 Strand = Plus / Minus

                                                                        
Query: 254  acgacgctgtcatggaccctgttcttctggttctgggcaacgcattcggagatccacatc 313
            ||||| ||||| |||| ||||  |||||||||||| ||||| ||||| || |||||||| 
Sbjct: 1159 acgacactgtcgtggatcctggacttctggttctgtgcaacacattcagatatccacata 1100

                                                                        
Query: 314  aagttccttatctcctgctctcgtagcctcatgtacgcaaagaaaacagcatagtggaac 373
            | |||||| ||||||||||||| || |||||| ||||||||||| || || || ||||||
Sbjct: 1099 aggttcctgatctcctgctctcttaacctcatatacgcaaagaataccgcgtaatggaac 1040

                 
Query: 374  tgctg 378
            |||||
Sbjct: 1039 tgctg 1035



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 76/92 (82%)
 Strand = Plus / Minus

                                                                       
Query: 488 ttctccattacaccacgcacctggtcaacatcttcacagacagccaactcttcatgacca 547
           |||||||| |||||||| |||||||| | ||| || |||| ||| | |||||| ||||||
Sbjct: 925 ttctccataacaccacgaacctggtctatatcctcgcagatagcaagctcttcgtgacca 866

                                           
Query: 548 tatggaaacaatagaccgaaattggagtacag 579
           |||||| | | |||||| || || ||||||||
Sbjct: 865 tatggatagagtagaccaaagttagagtacag 834
to top
>gb|AY089082.1| Arabidopsis thaliana clone 29760 mRNA, complete sequence
          Length = 1363

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 106/125 (84%)
 Strand = Plus / Minus

                                                                        
Query: 254  acgacgctgtcatggaccctgttcttctggttctgggcaacgcattcggagatccacatc 313
            ||||| ||||| |||| ||||  |||||||||||| ||||| ||||| || |||||||| 
Sbjct: 1122 acgacactgtcgtggatcctggacttctggttctgtgcaacacattcagatatccacata 1063

                                                                        
Query: 314  aagttccttatctcctgctctcgtagcctcatgtacgcaaagaaaacagcatagtggaac 373
            | |||||| ||||||||||||| || |||||| ||||||||||| || || || ||||||
Sbjct: 1062 aggttcctgatctcctgctctcttaacctcatatacgcaaagaataccgcgtaatggaac 1003

                 
Query: 374  tgctg 378
            |||||
Sbjct: 1002 tgctg 998



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 76/92 (82%)
 Strand = Plus / Minus

                                                                       
Query: 488 ttctccattacaccacgcacctggtcaacatcttcacagacagccaactcttcatgacca 547
           |||||||| |||||||| |||||||| | ||| || |||| ||| | |||||| ||||||
Sbjct: 888 ttctccataacaccacgaacctggtctatatcctcgcagatagcaagctcttcgtgacca 829

                                           
Query: 548 tatggaaacaatagaccgaaattggagtacag 579
           |||||| | | |||||| || || ||||||||
Sbjct: 828 tatggatagagtagaccaaagttagagtacag 797
to top
>ref|NM_113792.1| Arabidopsis thaliana hydrogen-transporting ATP synthase, rotational
            mechanism / hydrogen-transporting ATPase, rotational
            mechanism AT3G28715 mRNA, complete cds
          Length = 1056

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 239/303 (78%)
 Strand = Plus / Minus

                                                                        
Query: 277  cttctggttctgggcaacgcattcggagatccacatcaagttccttatctcctgctctcg 336
            |||||||||||| ||||| ||||| || |||||||||| |||||| ||||||||||| ||
Sbjct: 1020 cttctggttctgtgcaacacattcagatatccacatcaggttcctgatctcctgctcccg 961

                                                                        
Query: 337  tagcctcatgtacgcaaagaaaacagcatagtggaactgctgttcgaatgacaggcgcag 396
             | |||||| ||||||||||| || || || ||||||||||| || || |  | ||  ||
Sbjct: 960  caacctcatatacgcaaagaataccgcgtaatggaactgctgctcaaaggctaagcaaag 901

                                                                        
Query: 397  cctctttacttcctcctcatagaaggccttgtccaacatctgactttccccatatgatat 456
            |||  | ||||| || ||||| || |||||||| | |||||| ||||| ||||| || ||
Sbjct: 900  ccttctgacttcttcttcataaaatgccttgtcgagcatctggctttctccataagacat 841

                                                                        
Query: 457  ctttgcaaaaatagactggtatggggggtacttctccattacaccacgcacctggtcaac 516
            ||| |  || ||||  || || || ||||| || ||||| |||||||| ||||| || | 
Sbjct: 840  cttggagaatatagcttgatacggagggtatttttccataacaccacgaacctgatctat 781

                                                                        
Query: 517  atcttcacagacagccaactcttcatgaccatatggaaacaatagaccgaaattggagta 576
             |||||||||| ||| | ||| || || ||||||||| | |  ||||| || ||||||||
Sbjct: 780  gtcttcacagatagcaagctcctcgtggccatatggatagaggagaccaaagttggagta 721

               
Query: 577  cag 579
            |||
Sbjct: 720  cag 718
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>gb|BT000154.1| Arabidopsis thaliana Unknown protein (At3g28715) mRNA, complete cds
          Length = 1207

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 239/303 (78%)
 Strand = Plus / Minus

                                                                        
Query: 277  cttctggttctgggcaacgcattcggagatccacatcaagttccttatctcctgctctcg 336
            |||||||||||| ||||| ||||| || |||||||||| |||||| ||||||||||| ||
Sbjct: 1020 cttctggttctgtgcaacacattcagatatccacatcaggttcctgatctcctgctcccg 961

                                                                        
Query: 337  tagcctcatgtacgcaaagaaaacagcatagtggaactgctgttcgaatgacaggcgcag 396
             | |||||| ||||||||||| || || || ||||||||||| || || |  | ||  ||
Sbjct: 960  caacctcatatacgcaaagaataccgcgtaatggaactgctgctcaaaggctaagcaaag 901

                                                                        
Query: 397  cctctttacttcctcctcatagaaggccttgtccaacatctgactttccccatatgatat 456
            |||  | ||||| || ||||| || |||||||| | |||||| ||||| ||||| || ||
Sbjct: 900  ccttctgacttcttcttcataaaatgccttgtcgagcatctggctttctccataagacat 841

                                                                        
Query: 457  ctttgcaaaaatagactggtatggggggtacttctccattacaccacgcacctggtcaac 516
            ||| |  || ||||  || || || ||||| || ||||| |||||||| ||||| || | 
Sbjct: 840  cttggagaatatagcttgatacggagggtatttttccataacaccacgaacctgatctat 781

                                                                        
Query: 517  atcttcacagacagccaactcttcatgaccatatggaaacaatagaccgaaattggagta 576
             |||||||||| ||| | ||| || || ||||||||| | |  ||||| || ||||||||
Sbjct: 780  gtcttcacagatagcaagctcctcgtggccatatggatagaggagaccaaagttggagta 721

               
Query: 577  cag 579
            |||
Sbjct: 720  cag 718
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>gb|AY062635.1| Arabidopsis thaliana Unknown protein mRNA, complete cds
          Length = 1422

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 239/303 (78%)
 Strand = Plus / Minus

                                                                        
Query: 277  cttctggttctgggcaacgcattcggagatccacatcaagttccttatctcctgctctcg 336
            |||||||||||| ||||| ||||| || |||||||||| |||||| ||||||||||| ||
Sbjct: 1105 cttctggttctgtgcaacacattcagatatccacatcaggttcctgatctcctgctcccg 1046

                                                                        
Query: 337  tagcctcatgtacgcaaagaaaacagcatagtggaactgctgttcgaatgacaggcgcag 396
             | |||||| ||||||||||| || || || ||||||||||| || || |  | ||  ||
Sbjct: 1045 caacctcatatacgcaaagaataccgcgtaatggaactgctgctcaaaggctaagcaaag 986

                                                                        
Query: 397  cctctttacttcctcctcatagaaggccttgtccaacatctgactttccccatatgatat 456
            |||  | ||||| || ||||| || |||||||| | |||||| ||||| ||||| || ||
Sbjct: 985  ccttctgacttcttcttcataaaatgccttgtcgagcatctggctttctccataagacat 926

                                                                        
Query: 457  ctttgcaaaaatagactggtatggggggtacttctccattacaccacgcacctggtcaac 516
            ||| |  || ||||  || || || ||||| || ||||| |||||||| ||||| || | 
Sbjct: 925  cttggagaatatagcttgatacggagggtatttttccataacaccacgaacctgatctat 866

                                                                        
Query: 517  atcttcacagacagccaactcttcatgaccatatggaaacaatagaccgaaattggagta 576
             |||||||||| ||| | ||| || || ||||||||| | |  ||||| || ||||||||
Sbjct: 865  gtcttcacagatagcaagctcctcgtggccatatggatagaggagaccaaagttggagta 806

               
Query: 577  cag 579
            |||
Sbjct: 805  cag 803
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>gb|AF428348.1|AF428348 Arabidopsis thaliana AT3g28715/MZN14_21 mRNA, complete cds
          Length = 1382

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 239/303 (78%)
 Strand = Plus / Minus

                                                                        
Query: 277  cttctggttctgggcaacgcattcggagatccacatcaagttccttatctcctgctctcg 336
            |||||||||||| ||||| ||||| || |||||||||| |||||| ||||||||||| ||
Sbjct: 1143 cttctggttctgtgcaacacattcagatatccacatcaggttcctgatctcctgctcccg 1084

                                                                        
Query: 337  tagcctcatgtacgcaaagaaaacagcatagtggaactgctgttcgaatgacaggcgcag 396
             | |||||| ||||||||||| || || || ||||||||||| || || |  | ||  ||
Sbjct: 1083 caacctcatatacgcaaagaataccgcgtaatggaactgctgctcaaaggctaagcaaag 1024

                                                                        
Query: 397  cctctttacttcctcctcatagaaggccttgtccaacatctgactttccccatatgatat 456
            |||  | ||||| || ||||| || |||||||| | |||||| ||||| ||||| || ||
Sbjct: 1023 ccttctgacttcttcttcataaaatgccttgtcgagcatctggctttctccataagacat 964

                                                                        
Query: 457  ctttgcaaaaatagactggtatggggggtacttctccattacaccacgcacctggtcaac 516
            ||| |  || ||||  || || || ||||| || ||||| |||||||| ||||| || | 
Sbjct: 963  cttggagaatatagcttgatacggagggtatttttccataacaccacgaacctgatctat 904

                                                                        
Query: 517  atcttcacagacagccaactcttcatgaccatatggaaacaatagaccgaaattggagta 576
             |||||||||| ||| | ||| || || ||||||||| | |  ||||| || ||||||||
Sbjct: 903  gtcttcacagatagcaagctcctcgtggccatatggatagaggagaccaaagttggagta 844

               
Query: 577  cag 579
            |||
Sbjct: 843  cag 841
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>dbj|AP000420.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MZN14
          Length = 82890

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 104/123 (84%)
 Strand = Plus / Plus

                                                                         
Query: 254   acgacgctgtcatggaccctgttcttctggttctgggcaacgcattcggagatccacatc 313
             ||||| ||||| |||| ||||  |||||||||||| ||||| ||||| || |||||||| 
Sbjct: 75724 acgacactgtcgtggatcctggacttctggttctgtgcaacacattcagatatccacata 75783

                                                                         
Query: 314   aagttccttatctcctgctctcgtagcctcatgtacgcaaagaaaacagcatagtggaac 373
             | |||||| ||||||||||||| || |||||| ||||||||||| || || || ||||||
Sbjct: 75784 aggttcctgatctcctgctctcttaacctcatatacgcaaagaataccgcgtaatggaac 75843

                
Query: 374   tgc 376
             |||
Sbjct: 75844 tgc 75846



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 86/100 (86%)
 Strand = Plus / Minus

                                                                         
Query: 277   cttctggttctgggcaacgcattcggagatccacatcaagttccttatctcctgctctcg 336
             |||||||||||| ||||| ||||| || |||||||||| |||||| ||||||||||| ||
Sbjct: 82881 cttctggttctgtgcaacacattcagatatccacatcaggttcctgatctcctgctcccg 82822

                                                     
Query: 337   tagcctcatgtacgcaaagaaaacagcatagtggaactgc 376
              | |||||| ||||||||||| || || || |||||||||
Sbjct: 82821 caacctcatatacgcaaagaataccgcgtaatggaactgc 82782
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>gb|AC155348.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1
             clone KBrH097M21, complete sequence
          Length = 131063

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 85/100 (85%)
 Strand = Plus / Plus

                                                                         
Query: 277   cttctggttctgggcaacgcattcggagatccacatcaagttccttatctcctgctctcg 336
             |||||| ||||| ||||| ||||| || |||||||||| |||||| ||||||||||| | 
Sbjct: 96226 cttctgattctgcgcaacacattccgatatccacatcaggttcctgatctcctgctccct 96285

                                                     
Query: 337   tagcctcatgtacgcaaagaaaacagcatagtggaactgc 376
              | ||||||||| |||||||| || || ||||||||||||
Sbjct: 96286 caacctcatgtaagcaaagaacaccgcgtagtggaactgc 96325



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 473   tggtatggggggtacttctccattacaccacgcacct 509
             ||||| || |||||||||||||| |||||||| ||||
Sbjct: 96512 tggtaaggagggtacttctccatcacaccacgaacct 96548
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>gb|AC137994.19| Medicago truncatula clone mth2-23f15, complete sequence
          Length = 131563

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 95/114 (83%)
 Strand = Plus / Plus

                                                                          
Query: 396    gcctctttacttcctcctcatagaaggccttgtccaacatctgactttccccatatgata 455
              ||||||| ||||||||||||||||| |||||||| | |||||| || |||||||| ||||
Sbjct: 129739 gcctcttgacttcctcctcatagaatgccttgtcaagcatctggctctccccatacgata 129798

                                                                    
Query: 456    tctttgcaaaaatagactggtatggggggtacttctccattacaccacgcacct 509
               ||| ||||| ||||| || || || ||||| || ||||| ||| |||| ||||
Sbjct: 129799 acttcgcaaagatagattgataaggagggtatttttccataacagcacgaacct 129852



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                       
Query: 320    cttatctcctgctctcgtagcctcatgtacgcaaagaaaacagcatagtggaactgc 376
              |||||||||||||| | || |||||| || || ||||||||||||||||| ||||||
Sbjct: 129526 cttatctcctgctcccttaacctcatatatgcgaagaaaacagcatagtgaaactgc 129582
to top
>gb|AC169177.4| Medicago truncatula chromosome 7 BAC clone mth2-1p4, complete sequence
          Length = 124443

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 95/114 (83%)
 Strand = Plus / Minus

                                                                          
Query: 396    gcctctttacttcctcctcatagaaggccttgtccaacatctgactttccccatatgata 455
              ||||||| ||||||||||||||||| |||||||| | |||||| || |||||||| ||||
Sbjct: 115554 gcctcttgacttcctcctcatagaatgccttgtcaagcatctggctctccccatacgata 115495

                                                                    
Query: 456    tctttgcaaaaatagactggtatggggggtacttctccattacaccacgcacct 509
               ||| ||||| ||||| || || || ||||| || ||||| ||| |||| ||||
Sbjct: 115494 acttcgcaaagatagattgataaggagggtatttttccataacagcacgaacct 115441



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Minus

                                                                         
Query: 396   gcctctttacttcctcctcatagaaggccttgtccaacatctgactttccccatatgata 455
             ||||||| ||||||||||||||||| |||||||| | |||||| || |||||||| ||||
Sbjct: 89919 gcctcttgacttcctcctcatagaatgccttgtcaagcatctggctctccccatacgata 89860

                             
Query: 456   tctttgcaaaaataga 471
              ||| ||||| |||||
Sbjct: 89859 acttcgcaaagataga 89844



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                      
Query: 320   cttatctcctgctctcgtagcctcatgtacgcaaagaaaacagcatagtggaactgc 376
             |||||||||||||| | || |||||| || |||||||||||||||||||| ||||||
Sbjct: 90132 cttatctcctgctcccttaacctcatatatgcaaagaaaacagcatagtgaaactgc 90076



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                       
Query: 320    cttatctcctgctctcgtagcctcatgtacgcaaagaaaacagcatagtggaactgc 376
              |||||||||||||| | || |||||| || || ||||||||||||||||| ||||||
Sbjct: 115767 cttatctcctgctcccttaacctcatatatgcgaagaaaacagcatagtgaaactgc 115711



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                   
Query: 323   atctcctgctctcgtagcctcatgtacgcaaagaaaacagcatagtggaactgc 376
             ||||||||||| | || |||||| || || ||||||||||||||||| ||||||
Sbjct: 50598 atctcctgctcccttaacctcatatatgcgaagaaaacagcatagtgaaactgc 50545



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 92/114 (80%)
 Strand = Plus / Minus

                                                                         
Query: 396   gcctctttacttcctcctcatagaaggccttgtccaacatctgactttccccatatgata 455
             ||||||| || || ||||||||||| |||||||| | |||||| || || ||||| ||||
Sbjct: 50388 gcctcttgacctcttcctcatagaatgccttgtcaagcatctggctctctccatacgata 50329

                                                                   
Query: 456   tctttgcaaaaatagactggtatggggggtacttctccattacaccacgcacct 509
              ||| ||||| ||||| || || || ||||| || ||||| ||| |||| ||||
Sbjct: 50328 acttcgcaaagatagattgataaggagggtatttttccatgacagcacgaacct 50275



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 521    tcacagacagccaactcttcatgaccatatgga 553
              ||||||||||| | ||| |||||||||||||||
Sbjct: 107512 tcacagacagcaagctcctcatgaccatatgga 107480
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>gb|AC157893.2| Medicago truncatula chromosome 7 BAC clone mth2-7m13, complete sequence
          Length = 140479

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                         
Query: 407   tcctcctcatagaaggccttgtccaacatctgactttccccatatgatatctttgcaaaa 466
             |||||||| ||||| |||||||| | ||||||||| || |||||||||| ||| ||||||
Sbjct: 64229 tcctcctcctagaatgccttgtcaagcatctgactctctccatatgataacttggcaaaa 64288

                  
Query: 467   ataga 471
             |||||
Sbjct: 64289 ataga 64293
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>emb|BX001018.11| Zebrafish DNA sequence from clone DKEY-11D22, complete sequence
          Length = 206937

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 1      aactgcacaaatgtgcccccact 23
              |||||||||||||||||||||||
Sbjct: 125179 aactgcacaaatgtgcccccact 125201
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>gb|AC147124.2| Mus musculus BAC clone RP24-163K4 from chromosome 7, complete sequence
          Length = 165569

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 66    ttttattttgctacaaaaacaaataa 91
             ||||||||| ||||||||||||||||
Sbjct: 15585 ttttattttactacaaaaacaaataa 15610
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>gb|AC125226.3| Mus musculus BAC clone RP23-39D21 from 7, complete sequence
          Length = 133624

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 66     ttttattttgctacaaaaacaaataa 91
              ||||||||| ||||||||||||||||
Sbjct: 120438 ttttattttactacaaaaacaaataa 120463
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>emb|AL157897.8| Human DNA sequence from clone RP11-8D22 on chromosome 10, complete
              sequence
          Length = 173310

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 66     ttttattttgctacaaaaacaaataa 91
              ||||||||| ||||||||||||||||
Sbjct: 166832 ttttattttactacaaaaacaaataa 166807
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>emb|BX322575.19| Zebrafish DNA sequence from clone CH211-283E2 in linkage group 9,
              complete sequence
          Length = 149874

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 3      ctgcacaaatgtgcccccact 23
              |||||||||||||||||||||
Sbjct: 107444 ctgcacaaatgtgcccccact 107424
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>gb|AF186190.4| Homo sapiens chromosome 8 clone CTC-369M3 map 8q24.3 , complete sequence
          Length = 152405

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 521    tcacagacagccaactcttca 541
              |||||||||||||||||||||
Sbjct: 111452 tcacagacagccaactcttca 111472
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>dbj|D00313.1|YS2PEP1 Saccharomycopsis fibuligera PEP1 gene for putative secretable acid
            protease, complete cds
          Length = 2753

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 417  agaaggccttgtccaacatct 437
            |||||||||||||||||||||
Sbjct: 1687 agaaggccttgtccaacatct 1667
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>gb|AF022647.1| Fusobacterium nucleatum plasmid pPA52, complete sequence
          Length = 6281

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 73   ttgctacaaaaacaaataat 92
            ||||||||||||||||||||
Sbjct: 5207 ttgctacaaaaacaaataat 5226
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>gb|AF159249.1| Fusobacterium nucleatum plasmid pFN1, complete sequence
          Length = 5887

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 73   ttgctacaaaaacaaataat 92
            ||||||||||||||||||||
Sbjct: 2322 ttgctacaaaaacaaataat 2341
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 69       tattttgctacaaaaacaaataat 92
                |||||||||| |||||||||||||
Sbjct: 20896600 tattttgctaaaaaaacaaataat 20896577
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>gb|AE017199.1| Nanoarchaeum equitans Kin4-M, complete genome
          Length = 490885

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 70     attttgctacaaaaacaaat 89
              ||||||||||||||||||||
Sbjct: 333714 attttgctacaaaaacaaat 333695
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>gb|AC132388.3| Mus musculus BAC clone RP23-443H3 from chromosome 3, complete sequence
          Length = 200490

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 432   acatctgactttccccatat 451
             ||||||||||||||||||||
Sbjct: 46333 acatctgactttccccatat 46352
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>gb|AC072028.14| Homo sapiens 3 BAC RP11-190C21 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 186739

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   catagaaaataggaacaagg 144
             ||||||||||||||||||||
Sbjct: 41380 catagaaaataggaacaagg 41399
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>gb|AC124370.3| Mus musculus BAC clone RP24-554F1 from chromosome 3, complete sequence
          Length = 181208

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 432    acatctgactttccccatat 451
              ||||||||||||||||||||
Sbjct: 164976 acatctgactttccccatat 164995
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>ref|XM_648131.1| Entamoeba histolytica HM-1:IMSS conserved hypothetical protein
           (90.t00024) partial mRNA
          Length = 1053

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 128 agaaaataggaacaaggggaataacaaa 155
           ||||||||||||||| || |||||||||
Sbjct: 269 agaaaataggaacaatggtaataacaaa 296
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>gb|AC183832.3| Pan troglodytes BAC clone CH251-260G12 from chromosome 7, complete
             sequence
          Length = 179012

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 415   atagaaggccttgtccaaca 434
             ||||||||||||||||||||
Sbjct: 26478 atagaaggccttgtccaaca 26497
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>emb|AL359920.15| Human DNA sequence from clone RP11-359P14 on chromosome 13 Contains a
             novel gene and a TAR DNA binding protein (TARDBP)
             pseudogene, the 5' UTR of a novel gene (FLJ21007) and 2
             CpG islands, complete sequence
          Length = 226860

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 358   aacagcatagtggaactgct 377
             ||||||||||||||||||||
Sbjct: 30727 aacagcatagtggaactgct 30746
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>gb|AC092943.5| Homo sapiens 3 BAC RP11-564C24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 89885

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    aaataacatatttatttagt 47
             ||||||||||||||||||||
Sbjct: 41399 aaataacatatttatttagt 41418
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>emb|AL844182.10| Mouse DNA sequence from clone RP23-399H17 on chromosome 4, complete
             sequence
          Length = 201590

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 506   acctggtcaacatcttcaca 525
             ||||||||||||||||||||
Sbjct: 97372 acctggtcaacatcttcaca 97353
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>emb|CR385068.11| Zebrafish DNA sequence from clone CH211-245H7 in linkage group 19,
             complete sequence
          Length = 177489

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     ctgcacaaatgtgcccccac 22
             ||||||||||||||||||||
Sbjct: 88323 ctgcacaaatgtgcccccac 88342
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>gb|AC091966.3| Homo sapiens chromosome 5 clone RP11-489E3, complete sequence
          Length = 91296

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    ctacaaaaacaaataatgat 95
             ||||||||||||||||||||
Sbjct: 47263 ctacaaaaacaaataatgat 47244
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>gb|AC091799.5| Homo sapiens BAC clone RP11-416N13 from 7, complete sequence
          Length = 48680

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 415   atagaaggccttgtccaaca 434
             ||||||||||||||||||||
Sbjct: 22696 atagaaggccttgtccaaca 22677
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>gb|CP000237.1| Neorickettsia sennetsu strain Miyayama, complete genome
          Length = 859006

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 452    gatatctttgcaaaaataga 471
              ||||||||||||||||||||
Sbjct: 171660 gatatctttgcaaaaataga 171679
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>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome
          Length = 2839318

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 112     agcttttcagccgcatagaa 131
               ||||||||||||||||||||
Sbjct: 1463892 agcttttcagccgcatagaa 1463873
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 62       cgccttttattttgctacaa 81
                ||||||||||||||||||||
Sbjct: 13032605 cgccttttattttgctacaa 13032586
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 69       tattttgctacaaaaacaaataat 92
                |||||||||| |||||||||||||
Sbjct: 20889629 tattttgctaaaaaaacaaataat 20889606
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>gb|AC146468.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0008D12
             map MAP_LOC, complete sequence
          Length = 167323

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 69    tattttgctacaaaaacaaataat 92
             |||||||||| |||||||||||||
Sbjct: 25912 tattttgctaaaaaaacaaataat 25935
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>gb|AC011005.7|AC011005 Homo sapiens chromosome 7 clone RP11-286H14, complete sequence
          Length = 217615

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 421    ggccttgtccaacatctgac 440
              ||||||||||||||||||||
Sbjct: 116163 ggccttgtccaacatctgac 116144
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>gb|AC083866.2|AC083866 Homo sapiens chromosome 7 clone RP11-702D16, complete sequence
          Length = 170528

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 421   ggccttgtccaacatctgac 440
             ||||||||||||||||||||
Sbjct: 40039 ggccttgtccaacatctgac 40020
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>gb|AC069151.6| Homo sapiens BAC clone RP11-236I9 from 2, complete sequence
          Length = 37694

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 415   atagaaggccttgtccaaca 434
             ||||||||||||||||||||
Sbjct: 31698 atagaaggccttgtccaaca 31717
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>dbj|AP003763.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0531C01
          Length = 158574

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    cgccttttattttgctacaa 81
             ||||||||||||||||||||
Sbjct: 71406 cgccttttattttgctacaa 71387
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>dbj|AP003619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0577H07
          Length = 126757

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     cgccttttattttgctacaa 81
              ||||||||||||||||||||
Sbjct: 114982 cgccttttattttgctacaa 114963
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>dbj|AB024028.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K1G2
          Length = 70952

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   tttgtacagccatatgcaca 226
             ||||||||||||||||||||
Sbjct: 66000 tttgtacagccatatgcaca 66019
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>emb|CT967325.1| Zebrafish DNA sequence from clone DKEY-25K11, complete sequence
          Length = 267826

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 68    ttattttgctacaaaaacaaataa 91
             ||||||||| ||||||||||||||
Sbjct: 81817 ttattttgcaacaaaaacaaataa 81794
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>emb|AL935332.12| Zebrafish DNA sequence from clone DKEY-77F17 in linkage group 18,
             complete sequence
          Length = 139084

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 68    ttattttgctacaaaaacaaataa 91
             ||||||||| ||||||||||||||
Sbjct: 17281 ttattttgcaacaaaaacaaataa 17258
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>emb|CT010505.18| Mouse DNA sequence from clone RP23-99P18 on chromosome 16, complete
             sequence
          Length = 229346

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   catggaccctgttcttctgg 283
             ||||||||||||||||||||
Sbjct: 91184 catggaccctgttcttctgg 91203
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>emb|BX001015.5| Zebrafish DNA sequence from clone CH211-261D18 in linkage group 7,
             complete sequence
          Length = 150217

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    acatatttatttagtttacc 52
             ||||||||||||||||||||
Sbjct: 56792 acatatttatttagtttacc 56773
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>emb|CT573078.1| Medicago truncatula chromosome 5 clone mte1-4f8, COMPLETE SEQUENCE
          Length = 165916

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    ggaaataacatatttattta 45
             ||||||||||||||||||||
Sbjct: 49376 ggaaataacatatttattta 49395


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,317,434
Number of Sequences: 3902068
Number of extensions: 6317434
Number of successful extensions: 115693
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115379
Number of HSP's gapped (non-prelim): 312
length of query: 596
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 573
effective length of database: 17,143,297,704
effective search space: 9823109584392
effective search space used: 9823109584392
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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