ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags30o14 |
|---|---|
| Clone Library Name | barley_pub |
>ATCAY_MACFA (Q9GKT0) Caytaxin| Length = 371 Score = 73.9 bits (180), Expect = 4e-13 Identities = 39/135 (28%), Positives = 72/135 (53%) Frame = -2 Query: 603 LERFVLHVVKEFEPLIQKPYTIVYLHSAASLQPQPDLGFMKRIQQILGRKHQRNLHGIYM 424 +E L+V+ E L+ + Y IVYL+ A + P +G++K+ Q++ R+ ++NL + + Sbjct: 211 MENLFLYVISSLELLVAEDYMIVYLNGATPRRRMPGIGWLKKCYQMIDRRLRKNLKSLII 270 Query: 423 LHPTLGLRTAILGMQLLIDGEVWKKVVYVDRLVQLFRYVPREQLTIPDFVFQHDLEVNGG 244 +HP+ +RT + + I + K+ YV L L + +P E + IPD V Q++ E Sbjct: 271 VHPSWFIRTVLAISRPFISVKFINKIQYVHSLEDLEQLIPMEHVQIPDCVLQYEEERLKA 330 Query: 243 RGMIVDPRTKHIYQR 199 R P+ + + R Sbjct: 331 RRESARPQPEFVMPR 345
>ATCAY_HUMAN (Q86WG3) Caytaxin (Ataxia Cayman type protein) (BNIP-H)| Length = 371 Score = 73.9 bits (180), Expect = 4e-13 Identities = 39/135 (28%), Positives = 72/135 (53%) Frame = -2 Query: 603 LERFVLHVVKEFEPLIQKPYTIVYLHSAASLQPQPDLGFMKRIQQILGRKHQRNLHGIYM 424 +E L+V+ E L+ + Y IVYL+ A + P +G++K+ Q++ R+ ++NL + + Sbjct: 211 MENLFLYVISSLELLVAEDYMIVYLNGATPRRRMPGIGWLKKCYQMIDRRLRKNLKSLII 270 Query: 423 LHPTLGLRTAILGMQLLIDGEVWKKVVYVDRLVQLFRYVPREQLTIPDFVFQHDLEVNGG 244 +HP+ +RT + + I + K+ YV L L + +P E + IPD V Q++ E Sbjct: 271 VHPSWFIRTVLAISRPFISVKFINKIQYVHSLEDLEQLIPMEHVQIPDCVLQYEEERLKA 330 Query: 243 RGMIVDPRTKHIYQR 199 R P+ + + R Sbjct: 331 RRESARPQPEFVLPR 345
>ATCAY_MOUSE (Q8BHE3) Caytaxin| Length = 372 Score = 72.0 bits (175), Expect = 1e-12 Identities = 34/114 (29%), Positives = 65/114 (57%) Frame = -2 Query: 603 LERFVLHVVKEFEPLIQKPYTIVYLHSAASLQPQPDLGFMKRIQQILGRKHQRNLHGIYM 424 +E L+V+ E L+ + Y IVYL+ A + P +G++K+ ++ R+ ++NL + + Sbjct: 211 MENLFLYVISSLELLVAEDYMIVYLNGATPRRRMPGIGWLKKCYHMIDRRLRKNLKSLII 270 Query: 423 LHPTLGLRTAILGMQLLIDGEVWKKVVYVDRLVQLFRYVPREQLTIPDFVFQHD 262 +HP+ +RT + + I + K+ YV L +L R +P E + +PD V Q++ Sbjct: 271 VHPSWFIRTVLAISRPFISVKFISKIQYVHSLEELERLIPMEHVQLPDCVLQYE 324
>BNIP2_HUMAN (Q12982) BCL2/adenovirus E1B 19-kDa protein-interacting protein 2| Length = 314 Score = 71.6 bits (174), Expect = 2e-12 Identities = 36/119 (30%), Positives = 68/119 (57%) Frame = -2 Query: 603 LERFVLHVVKEFEPLIQKPYTIVYLHSAASLQPQPDLGFMKRIQQILGRKHQRNLHGIYM 424 ++ +V+ E L+ + Y IVYL+ A + + P LG++++ Q + R+ ++NL + + Sbjct: 187 MDNLFKYVIGTLELLVAENYMIVYLNGATTRRKMPSLGWLRKCYQQIDRRLRKNLKSLII 246 Query: 423 LHPTLGLRTAILGMQLLIDGEVWKKVVYVDRLVQLFRYVPREQLTIPDFVFQHDLEVNG 247 +HP+ +RT + + I + +K+ YV L +L VP E + IP+ + Q D E+NG Sbjct: 247 VHPSWFIRTLLAVTRPFISSKFSQKIRYVFNLAELAELVPMEYVGIPECIKQVDQELNG 305
>RHG01_HUMAN (Q07960) Rho-GTPase-activating protein 1 (GTPase-activating protein| rhoOGAP) (Rho-related small GTPase protein activator) (CDC42 GTPase-activating protein) (p50-rhoGAP) Length = 439 Score = 68.9 bits (167), Expect = 1e-11 Identities = 32/116 (27%), Positives = 68/116 (58%) Frame = -2 Query: 609 LDLERFVLHVVKEFEPLIQKPYTIVYLHSAASLQPQPDLGFMKRIQQILGRKHQRNLHGI 430 LD + + ++ + ++ YT++YLH + +P L +++ + RK+++N+ + Sbjct: 99 LDHSKLLGYLKHTLDQYVESDYTLLYLHHGLTSDNKPSLSWLRDAYREFDRKYKKNIKAL 158 Query: 429 YMLHPTLGLRTAILGMQLLIDGEVWKKVVYVDRLVQLFRYVPREQLTIPDFVFQHD 262 Y++HPT+ ++T ++ + LI + +K+ YV+ L +L +V EQL IP V ++D Sbjct: 159 YIVHPTMFIKTLLILFKPLISFKFGQKIFYVNYLSELSEHVKLEQLGIPRQVLKYD 214
>BNIP2_MOUSE (O54940) BCL2/adenovirus E1B 19-kDa protein-interacting protein 2| Length = 326 Score = 67.4 bits (163), Expect = 4e-11 Identities = 33/116 (28%), Positives = 66/116 (56%) Frame = -2 Query: 603 LERFVLHVVKEFEPLIQKPYTIVYLHSAASLQPQPDLGFMKRIQQILGRKHQRNLHGIYM 424 ++ +V+ E L+ + Y I+YL+ A + + P LG+++R Q + R+ ++NL + + Sbjct: 187 MDNLFKYVIGTLELLVAENYMIIYLNGATTRRKMPSLGWLRRCYQQIDRRLRKNLKSLII 246 Query: 423 LHPTLGLRTAILGMQLLIDGEVWKKVVYVDRLVQLFRYVPREQLTIPDFVFQHDLE 256 +HP+ +RT + + I + +K+ YV L +L VP E + IP+ + Q++ E Sbjct: 247 VHPSWFIRTLLAVTRPFISSKFSQKIRYVFNLAELAELVPMEYVGIPECIKQYEEE 302
>RHG08_MOUSE (Q9CXP4) Rho-GTPase-activating protein 8| Length = 425 Score = 66.2 bits (160), Expect = 8e-11 Identities = 41/141 (29%), Positives = 72/141 (51%) Frame = -2 Query: 618 LRCLDLERFVLHVVKEFEPLIQKPYTIVYLHSAASLQPQPDLGFMKRIQQILGRKHQRNL 439 L L+ +R + ++ + ++ YTIVY H S Q +P LG+++ + RK+++NL Sbjct: 46 LHQLNHQRLLEYLKYTLDQHVENDYTIVYFHYGLSSQNKPSLGWLQNTYKEFDRKYKKNL 105 Query: 438 HGIYMLHPTLGLRTAILGMQLLIDGEVWKKVVYVDRLVQLFRYVPREQLTIPDFVFQHDL 259 +Y++HPT ++ + LI + KKV Y L +L ++ +QL IP V ++D Sbjct: 106 KALYVVHPTSLIKALWNIFKPLISHKFGKKVTYCSNLRELREHLQCDQLLIPPEVVRYDE 165 Query: 258 EVNGGRGMIVDPRTKHIYQRP 196 ++ P TK RP Sbjct: 166 KLQNLHKGQPPPPTKTPPPRP 186
>BNIPL_MOUSE (Q99JU7) Bcl-2/adenovirus E1B 19 kDa-interacting protein 2-like| protein Length = 328 Score = 58.2 bits (139), Expect = 2e-08 Identities = 30/122 (24%), Positives = 67/122 (54%) Frame = -2 Query: 603 LERFVLHVVKEFEPLIQKPYTIVYLHSAASLQPQPDLGFMKRIQQILGRKHQRNLHGIYM 424 +E ++V E L+ + Y +V+L S P L ++++ + L R+ ++NL + + Sbjct: 206 MEHLFRYMVGTLELLVAENYLLVHLSGGTSRAQVPPLSWIRQCYRTLDRRLRKNLRALVV 265 Query: 423 LHPTLGLRTAILGMQLLIDGEVWKKVVYVDRLVQLFRYVPREQLTIPDFVFQHDLEVNGG 244 +H T ++ + ++ I + +K+ ++D L +L + + EQ+ IP+ V Q D +++G Sbjct: 266 VHATWYVKAFLALVRPFISSKFTRKIRFLDSLGELAQLISLEQVHIPEVVRQLDRDLHGS 325 Query: 243 RG 238 +G Sbjct: 326 KG 327
>BNIPL_HUMAN (Q7Z465) Bcl-2/adenovirus E1B 19 kDa-interacting protein 2-like| protein Length = 357 Score = 55.5 bits (132), Expect = 1e-07 Identities = 29/122 (23%), Positives = 66/122 (54%) Frame = -2 Query: 603 LERFVLHVVKEFEPLIQKPYTIVYLHSAASLQPQPDLGFMKRIQQILGRKHQRNLHGIYM 424 +E ++V E L+ + Y +V+L S P L ++++ + L R+ ++NL + + Sbjct: 235 MEHLFRYMVGTLELLVAENYLLVHLSGGTSRAQVPPLSWIRQCYRTLDRRLRKNLRALVV 294 Query: 423 LHPTLGLRTAILGMQLLIDGEVWKKVVYVDRLVQLFRYVPREQLTIPDFVFQHDLEVNGG 244 +H T ++ + ++ I + +K+ ++D L +L + + +Q+ IP+ V Q D +++G Sbjct: 295 VHATWYVKAFLALLRPFISSKFTRKIRFLDSLGELAQLISLDQVHIPEAVRQLDRDLHGS 354 Query: 243 RG 238 G Sbjct: 355 GG 356
>RHG08_HUMAN (Q9NSG0) Rho-GTPase-activating protein 8| Length = 718 Score = 54.3 bits (129), Expect = 3e-07 Identities = 39/169 (23%), Positives = 74/169 (43%), Gaps = 31/169 (18%) Frame = -2 Query: 609 LDLERFVLHVVKEFEPLIQKPYTIVYLHSAASLQPQPDLGFMKRIQQILGRK-------- 454 LD +R + ++ + ++ YTIVY H + + +P LG+++ + RK Sbjct: 303 LDHQRLLEYLKYTLDQYVENDYTIVYFHYGLNSRNKPSLGWLQSAYKEFDRKDGDLTMWP 362 Query: 453 -----------------------HQRNLHGIYMLHPTLGLRTAILGMQLLIDGEVWKKVV 343 +++NL +Y++HPT ++ ++ LI + KKV+ Sbjct: 363 RLVSNSKLKRSSHLSLPKYWDYRYKKNLKALYVVHPTSFIKVLWNILKPLISHKFGKKVI 422 Query: 342 YVDRLVQLFRYVPREQLTIPDFVFQHDLEVNGGRGMIVDPRTKHIYQRP 196 Y + L +L ++ +QL IP V ++D ++ P TK RP Sbjct: 423 YFNYLSELHEHLKYDQLVIPPEVLRYDEKLQSLHEGRTPPPTKTPPPRP 471
>NF1_HUMAN (P21359) Neurofibromin (Neurofibromatosis-related protein NF-1)| [Contains: Neurofibromin truncated] Length = 2839 Score = 33.1 bits (74), Expect = 0.76 Identities = 31/140 (22%), Positives = 62/140 (44%), Gaps = 5/140 (3%) Frame = -2 Query: 657 GRPVMVVVGAHFLLRCLDLERFVLHVVKEFEPLIQKPYTIV--YLHSAASLQPQPDLGFM 484 G P+ V F ++ + + HV+ +P KPY IV H+ S + + D F+ Sbjct: 1602 GNPIFYYVARRFKTGQINGDLLIYHVLLTLKPYYAKPYEIVVDLTHTGPSNRFKTD--FL 1659 Query: 483 KRIQQILGRKHQRNLHGIYMLHPTLGLRTAILGMQLLIDG-EVWKKVVYVDRLVQLFRYV 307 + + N+ +Y+ + +R + L+ G + K++V++D +L ++ Sbjct: 1660 SKWFVVFPGFAYDNVSAVYIYNCNSWVREYTKYHERLLTGLKGSKRLVFIDCPGKLAEHI 1719 Query: 306 PREQLTIP--DFVFQHDLEV 253 EQ +P + DL+V Sbjct: 1720 EHEQQKLPAATLALEEDLKV 1739
>NF1_MOUSE (Q04690) Neurofibromin (Neurofibromatosis-related protein NF-1)| Length = 2841 Score = 32.7 bits (73), Expect = 0.99 Identities = 30/140 (21%), Positives = 62/140 (44%), Gaps = 5/140 (3%) Frame = -2 Query: 657 GRPVMVVVGAHFLLRCLDLERFVLHVVKEFEPLIQKPYTIV--YLHSAASLQPQPDLGFM 484 G P+ V F ++ + + HV+ +P KPY IV H+ S + + D F+ Sbjct: 1604 GNPIFYYVARRFKTGQINGDLLIYHVLLTLKPYYAKPYEIVVDLTHTGPSNRFKTD--FL 1661 Query: 483 KRIQQILGRKHQRNLHGIYMLHPTLGLRTAILGMQLLIDG-EVWKKVVYVDRLVQLFRYV 307 + + N+ +Y+ + +R + L+ G + K+++++D +L ++ Sbjct: 1662 SKWFVVFPGFAYDNVSAVYIYNCNSWVREYTKYHERLLTGLKGSKRLIFIDCPGKLAEHI 1721 Query: 306 PREQLTIP--DFVFQHDLEV 253 EQ +P + DL+V Sbjct: 1722 EHEQQKLPAATLALEEDLKV 1741
>NF1_RAT (P97526) Neurofibromin (Neurofibromatosis-related protein NF-1)| Length = 2820 Score = 32.7 bits (73), Expect = 0.99 Identities = 30/140 (21%), Positives = 62/140 (44%), Gaps = 5/140 (3%) Frame = -2 Query: 657 GRPVMVVVGAHFLLRCLDLERFVLHVVKEFEPLIQKPYTIV--YLHSAASLQPQPDLGFM 484 G P+ V F ++ + + HV+ +P KPY IV H+ S + + D F+ Sbjct: 1583 GNPIFYYVARRFKTGQINGDLLIYHVLLTLKPYYAKPYEIVVDLTHTGPSNRFKTD--FL 1640 Query: 483 KRIQQILGRKHQRNLHGIYMLHPTLGLRTAILGMQLLIDG-EVWKKVVYVDRLVQLFRYV 307 + + N+ +Y+ + +R + L+ G + K+++++D +L ++ Sbjct: 1641 SKWFVVFPGFAYDNVSAVYIYNCNSWVREYTKYHERLLTGLKGSKRLIFIDCPGKLAEHI 1700 Query: 306 PREQLTIP--DFVFQHDLEV 253 EQ +P + DL+V Sbjct: 1701 EHEQQKLPAATLALEEDLKV 1720
>5S_PROFR (Q70AC7) Methylmalonyl-CoA carboxyltransferase 5S subunit (EC| 2.1.3.1) (Transcarboxylase 5S subunit) Length = 505 Score = 30.0 bits (66), Expect = 6.4 Identities = 17/40 (42%), Positives = 22/40 (55%) Frame = -2 Query: 522 AASLQPQPDLGFMKRIQQILGRKHQRNLHGIYMLHPTLGL 403 AA L+PQP +K I+ G+K Q NLH H T G+ Sbjct: 187 AALLKPQPAYDIIKAIKDTYGQKTQINLH----CHSTTGV 222
>YCU4_YEAST (P25355) Hypothetical 65.2 kDa protein in THR4-PWP2 intergenic| region Length = 563 Score = 30.0 bits (66), Expect = 6.4 Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 5/82 (6%) Frame = -2 Query: 330 LVQLFRYVPREQLTIPDFVFQHDLEVNG-----GRGMIVDPRTKHIYQRPSG*FMSSMQS 166 L+ + R + E IP + +L + G ++ P KH+Y Sbjct: 92 LILMMRNLAAENQEIPQKLLLQNLVIRGFLHATSEYVVDTPLIKHLY------------I 139 Query: 165 KAHTCLFKSLYNYSFVDISLFP 100 TCLF NYS VD++ FP Sbjct: 140 ACLTCLFNIQQNYSTVDMTTFP 161
>YDAE_BACSU (P96578) Hypothetical protein ydaE| Length = 167 Score = 29.6 bits (65), Expect = 8.3 Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 10/67 (14%) Frame = -2 Query: 372 IDGEVWKKVVYVDRLVQLFRYVPREQLTIPD----------FVFQHDLEVNGGRGMIVDP 223 +DG+ K+ + R +++ YV E+ +P + H++E+ G + P Sbjct: 74 VDGQEGKQETFRCRYGKVYLYVEGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYTIPP 133 Query: 222 RTKHIYQ 202 TKH +Q Sbjct: 134 NTKHWFQ 140 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 100,823,090 Number of Sequences: 219361 Number of extensions: 2217535 Number of successful extensions: 5128 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 4986 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5127 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6314008338 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
