| Clone Name | rbags30o14 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_196722.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBb0015F09b.1), mRNA Length = 2130 Score = 531 bits (268), Expect = e-148 Identities = 424/476 (89%) Strand = Plus / Minus Query: 186 atcaaccagatggtctctgatagatatgttttgttcttgggtccacaatcatgcccctac 245 |||| ||||| ||||||||||| || ||||||||||||||||| ||||| | ||| || | Sbjct: 1786 atcagccagacggtctctgataaatgtgttttgttcttgggtcaacaattaggcctctcc 1727 Query: 246 caccattcacctccaaatcatgctgaaagacaaaatctggaatagttaattgttcgcgtg 305 |||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 1726 caccgttcacctccaaatcatgctgaaagacaaaatcaggaatagttagttgttcgcgtg 1667 Query: 306 gaacatatctgaacagttgcacgagcctgtcaacatacacaactttcttccatacctctc 365 | |||||||||||||| ||||| ||||| || || || |||||||||||||| ||||||| Sbjct: 1666 gtacatatctgaacagatgcacaagcctatccacgtagacaactttcttccaaacctctc 1607 Query: 366 catcaattaaaagctgcatccccagaatagctgttctcaaccccaaggttgggtggagca 425 |||||| || | |||||| ||||||||||||||||||| ||||| ||||||||||| | Sbjct: 1606 catcaacaaacatctgcattgccagaatagctgttctcaaacccaacgttgggtggagga 1547 Query: 426 tataaatcccatgaaggttccgctggtgtttccgacctaatatttgttgtatccgtttca 485 ||| || |||||||||| ||||| ||||| ||||| ||||||||||||| || |||| Sbjct: 1546 catatatggcatgaaggttgcgctgatgtttacgacccaatatttgttgtaggcgcttca 1487 Query: 486 taaatcctaaatctggttgcggttgtaatgatgctgctgagtggagatagacaatagtat 545 | |||||||||||||||||||||||||||||||| || || |||| ||||||||| ||| Sbjct: 1486 tgaatcctaaatctggttgcggttgtaatgatgcagcagaatggaaatagacaatgctat 1427 Query: 546 acggcttctgaatcaaaggttcaaactccttcactacatgtagaacaaaccgttcaagat 605 | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1426 atggcttctgaatcaaaggttcaaactcctttactacatgtagaacaaaccgttcaagat 1367 Query: 606 ccaggcagcgaagaagaaagtgtgcaccaacaacaaccataactgggcgcccttca 661 ||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 1366 ccaagcagcgaagaagaaagtgtgcaccaacaacaaccataaccgggcgtccttca 1311
>dbj|AK121209.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088J18, full insert sequence Length = 2183 Score = 531 bits (268), Expect = e-148 Identities = 424/476 (89%) Strand = Plus / Minus Query: 186 atcaaccagatggtctctgatagatatgttttgttcttgggtccacaatcatgcccctac 245 |||| ||||| ||||||||||| || ||||||||||||||||| ||||| | ||| || | Sbjct: 1866 atcagccagacggtctctgataaatgtgttttgttcttgggtcaacaattaggcctctcc 1807 Query: 246 caccattcacctccaaatcatgctgaaagacaaaatctggaatagttaattgttcgcgtg 305 |||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 1806 caccgttcacctccaaatcatgctgaaagacaaaatcaggaatagttagttgttcgcgtg 1747 Query: 306 gaacatatctgaacagttgcacgagcctgtcaacatacacaactttcttccatacctctc 365 | |||||||||||||| ||||| ||||| || || || |||||||||||||| ||||||| Sbjct: 1746 gtacatatctgaacagatgcacaagcctatccacgtagacaactttcttccaaacctctc 1687 Query: 366 catcaattaaaagctgcatccccagaatagctgttctcaaccccaaggttgggtggagca 425 |||||| || | |||||| ||||||||||||||||||| ||||| ||||||||||| | Sbjct: 1686 catcaacaaacatctgcattgccagaatagctgttctcaaacccaacgttgggtggagga 1627 Query: 426 tataaatcccatgaaggttccgctggtgtttccgacctaatatttgttgtatccgtttca 485 ||| || |||||||||| ||||| ||||| ||||| ||||||||||||| || |||| Sbjct: 1626 catatatggcatgaaggttgcgctgatgtttacgacccaatatttgttgtaggcgcttca 1567 Query: 486 taaatcctaaatctggttgcggttgtaatgatgctgctgagtggagatagacaatagtat 545 | |||||||||||||||||||||||||||||||| || || |||| ||||||||| ||| Sbjct: 1566 tgaatcctaaatctggttgcggttgtaatgatgcagcagaatggaaatagacaatgctat 1507 Query: 546 acggcttctgaatcaaaggttcaaactccttcactacatgtagaacaaaccgttcaagat 605 | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1506 atggcttctgaatcaaaggttcaaactcctttactacatgtagaacaaaccgttcaagat 1447 Query: 606 ccaggcagcgaagaagaaagtgtgcaccaacaacaaccataactgggcgcccttca 661 ||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 1446 ccaagcagcgaagaagaaagtgtgcaccaacaacaaccataaccgggcgtccttca 1391
>dbj|AK099979.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129C24, full insert sequence Length = 2062 Score = 333 bits (168), Expect = 4e-88 Identities = 399/476 (83%) Strand = Plus / Minus Query: 186 atcaaccagatggtctctgatagatatgttttgttcttgggtccacaatcatgcccctac 245 ||||||| |||||||| || |||| ||| |||||||| ||||| | || |||||| | | Sbjct: 1833 atcaacctgatggtctttggtagacatgctttgttctagggtcaattattatgccctttc 1774 Query: 246 caccattcacctccaaatcatgctgaaagacaaaatctggaatagttaattgttcgcgtg 305 |||||||||| || | ||||||||| ||||||||||| ||||| || | |||||| |||| Sbjct: 1773 caccattcacttcgagatcatgctggaagacaaaatcaggaattgtcagttgttcacgtg 1714 Query: 306 gaacatatctgaacagttgcacgagcctgtcaacatacacaactttcttccatacctctc 365 | || ||||||||||| ||||| || ||||| ||||| | |||||||||||| ||||| | Sbjct: 1713 gtacgtatctgaacagctgcacaagtctgtcgacatagataactttcttccagacctccc 1654 Query: 366 catcaattaaaagctgcatccccagaatagctgttctcaaccccaaggttgggtggagca 425 |||||| |||||||||| ||| |||||||||||||| ||||| |||||||| || | Sbjct: 1653 catcaacgaaaagctgcaaagccaatatagctgttctcaatcccaaagttgggtgaagta 1594 Query: 426 tataaatcccatgaaggttccgctggtgtttccgacctaatatttgttgtatccgtttca 485 ||| || ||||||| || ||||| || |||||||||||||||||||| | ||| |||| Sbjct: 1593 catatatagcatgaagattgcgctgatgcttccgacctaatatttgttgcaaccgcttca 1534 Query: 486 taaatcctaaatctggttgcggttgtaatgatgctgctgagtggagatagacaatagtat 545 | ||||||||||||||| || |||||| |||||||||||||||| ||||||||| | | Sbjct: 1533 tgaatcctaaatctggtcgcacttgtaaagatgctgctgagtggaaatagacaattgagt 1474 Query: 546 acggcttctgaatcaaaggttcaaactccttcactacatgtagaacaaaccgttcaagat 605 | ||||| |||||||| |||||||||||||| ||||||| ||||| ||| || ||||||| Sbjct: 1473 aaggcttttgaatcaatggttcaaactcctttactacatatagaataaatcgctcaagat 1414 Query: 606 ccaggcagcgaagaagaaagtgtgcaccaacaacaaccataactgggcgcccttca 661 ||| |||||||| |||||||| ||||||||||| |||||||| || ||||||||| Sbjct: 1413 ccaaacagcgaagtagaaagtgagcaccaacaaccaccataacaggacgcccttca 1358
>gb|AY110937.1| Zea mays CL12365_1 mRNA sequence Length = 995 Score = 204 bits (103), Expect = 3e-49 Identities = 181/207 (87%) Strand = Plus / Plus Query: 455 ttccgacctaatatttgttgtatccgtttcataaatcctaaatctggttgcggttgtaat 514 |||||||||| ||| ||||||| ||||||||| ||||||||||| || || ||||||||| Sbjct: 664 ttccgacctagtatctgttgtaaccgtttcatgaatcctaaatcaggctgtggttgtaat 723 Query: 515 gatgctgctgagtggagatagacaatagtatacggcttctgaatcaaaggttcaaactcc 574 ||||| | ||||||| ||||||||| || || ||||||||||||| || |||||| ||| Sbjct: 724 gatgccacagagtggaaatagacaattgtgtaaggcttctgaatcagagattcaaattcc 783 Query: 575 ttcactacatgtagaacaaaccgttcaagatccaggcagcgaagaagaaagtgtgcacca 634 || ||||||| ||||||||| ||||| ||||||| |||||||||||||||||| |||||| Sbjct: 784 tttactacatatagaacaaatcgttccagatccaagcagcgaagaagaaagtgagcacca 843 Query: 635 acaacaaccataactgggcgcccttca 661 |||| ||||||||||| ||||||||| Sbjct: 844 acaatgaccataactggacgcccttca 870 Score = 147 bits (74), Expect = 5e-32 Identities = 152/178 (85%) Strand = Plus / Plus Query: 186 atcaaccagatggtctctgatagatatgttttgttcttgggtccacaatcatgcccctac 245 ||||||||||||||||||| |||||||| |||||||||||||| || || |||||| | | Sbjct: 395 atcaaccagatggtctctggtagatatgctttgttcttgggtcaacgattatgccctttc 454 Query: 246 caccattcacctccaaatcatgctgaaagacaaaatctggaatagttaattgttcgcgtg 305 |||||||||| || | |||||||| ||||||||||| ||||| || | ||||| |||| Sbjct: 455 caccattcacttcaaggtcatgctggaagacaaaatcaggaatggtgagctgttcacgtg 514 Query: 306 gaacatatctgaacagttgcacgagcctgtcaacatacacaactttcttccatacctc 363 | ||||||||||| || ||||| || ||||| ||||| |||||||||||||| ||||| Sbjct: 515 gtacatatctgaatagctgcacaagtctgtcgacatatacaactttcttccagacctc 572
>gb|AC073391.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0015F09b, complete sequence Length = 108964 Score = 145 bits (73), Expect = 2e-31 Identities = 85/89 (95%) Strand = Plus / Minus Query: 573 ccttcactacatgtagaacaaaccgttcaagatccaggcagcgaagaagaaagtgtgcac 632 |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 89236 cctttactacatgtagaacaaaccgttcaagatccaagcagcgaagaagaaagtgtgcac 89177 Query: 633 caacaacaaccataactgggcgcccttca 661 |||||||||||||||| ||||| |||||| Sbjct: 89176 caacaacaaccataaccgggcgtccttca 89148 Score = 109 bits (55), Expect = 1e-20 Identities = 85/95 (89%) Strand = Plus / Minus Query: 268 ctgaaagacaaaatctggaatagttaattgttcgcgtggaacatatctgaacagttgcac 327 ||||||||||||||| |||||||||| |||||||||||| |||||||||||||| ||||| Sbjct: 90038 ctgaaagacaaaatcaggaatagttagttgttcgcgtggtacatatctgaacagatgcac 89979 Query: 328 gagcctgtcaacatacacaactttcttccatacct 362 ||||| || || || |||||||||||||| |||| Sbjct: 89978 aagcctatccacgtagacaactttcttccaaacct 89944 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 186 atcaaccagatggtctctgatagatatgttttgttcttgggtccacaatcatgcccctac 245 |||| ||||| ||||||||||| || ||||||||||||||||| ||||| | ||| || | Sbjct: 90207 atcagccagacggtctctgataaatgtgttttgttcttgggtcaacaattaggcctctcc 90148 Query: 246 caccattcacctccaaatcatgc 268 |||| |||||||||||||||||| Sbjct: 90147 caccgttcacctccaaatcatgc 90125 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 505 cggttgtaatgatgctgctgagtggagatagacaatagtatacggcttctgaatcaaagg 564 ||||||||||||||| || || |||| ||||||||| |||| ||||||||||||||||| Sbjct: 89526 cggttgtaatgatgcagcagaatggaaatagacaatgctatatggcttctgaatcaaagg 89467 Query: 565 ttcaaactcct 575 ||||||||||| Sbjct: 89466 ttcaaactcct 89456 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 435 catgaaggttccgctggtgtttccgacctaatatttgttgtatccgtttcataaatccta 494 |||||||||| ||||| ||||| ||||| ||||||||||||| || ||||| ||||||| Sbjct: 89694 catgaaggttgcgctgatgtttacgacccaatatttgttgtaggcgcttcatgaatccta 89635 Query: 495 aatctggttgc 505 ||||||||||| Sbjct: 89634 aatctggttgc 89624 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 357 atacctctccatcaattaaaagctgcatccccagaatagctgttctcaaccccaaggttg 416 ||||||||||||||| || | |||||| ||||||||||||||||||| ||||| |||| Sbjct: 89853 atacctctccatcaacaaacatctgcattgccagaatagctgttctcaaacccaacgttg 89794 Query: 417 ggtggag 423 ||||||| Sbjct: 89793 ggtggag 89787
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 145 bits (73), Expect = 2e-31 Identities = 85/89 (95%) Strand = Plus / Minus Query: 573 ccttcactacatgtagaacaaaccgttcaagatccaggcagcgaagaagaaagtgtgcac 632 |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 15505890 cctttactacatgtagaacaaaccgttcaagatccaagcagcgaagaagaaagtgtgcac 15505831 Query: 633 caacaacaaccataactgggcgcccttca 661 |||||||||||||||| ||||| |||||| Sbjct: 15505830 caacaacaaccataaccgggcgtccttca 15505802 Score = 109 bits (55), Expect = 1e-20 Identities = 85/95 (89%) Strand = Plus / Minus Query: 268 ctgaaagacaaaatctggaatagttaattgttcgcgtggaacatatctgaacagttgcac 327 ||||||||||||||| |||||||||| |||||||||||| |||||||||||||| ||||| Sbjct: 15506692 ctgaaagacaaaatcaggaatagttagttgttcgcgtggtacatatctgaacagatgcac 15506633 Query: 328 gagcctgtcaacatacacaactttcttccatacct 362 ||||| || || || |||||||||||||| |||| Sbjct: 15506632 aagcctatccacgtagacaactttcttccaaacct 15506598 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 186 atcaaccagatggtctctgatagatatgttttgttcttgggtccacaatcatgcccctac 245 |||| ||||| ||||||||||| || ||||||||||||||||| ||||| | ||| || | Sbjct: 15506861 atcagccagacggtctctgataaatgtgttttgttcttgggtcaacaattaggcctctcc 15506802 Query: 246 caccattcacctccaaatcatgc 268 |||| |||||||||||||||||| Sbjct: 15506801 caccgttcacctccaaatcatgc 15506779 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 505 cggttgtaatgatgctgctgagtggagatagacaatagtatacggcttctgaatcaaagg 564 ||||||||||||||| || || |||| ||||||||| |||| ||||||||||||||||| Sbjct: 15506180 cggttgtaatgatgcagcagaatggaaatagacaatgctatatggcttctgaatcaaagg 15506121 Query: 565 ttcaaactcct 575 ||||||||||| Sbjct: 15506120 ttcaaactcct 15506110 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 435 catgaaggttccgctggtgtttccgacctaatatttgttgtatccgtttcataaatccta 494 |||||||||| ||||| ||||| ||||| ||||||||||||| || ||||| ||||||| Sbjct: 15506348 catgaaggttgcgctgatgtttacgacccaatatttgttgtaggcgcttcatgaatccta 15506289 Query: 495 aatctggttgc 505 ||||||||||| Sbjct: 15506288 aatctggttgc 15506278 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 357 atacctctccatcaattaaaagctgcatccccagaatagctgttctcaaccccaaggttg 416 ||||||||||||||| || | |||||| ||||||||||||||||||| ||||| |||| Sbjct: 15506507 atacctctccatcaacaaacatctgcattgccagaatagctgttctcaaacccaacgttg 15506448 Query: 417 ggtggag 423 ||||||| Sbjct: 15506447 ggtggag 15506441
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 145 bits (73), Expect = 2e-31 Identities = 85/89 (95%) Strand = Plus / Minus Query: 573 ccttcactacatgtagaacaaaccgttcaagatccaggcagcgaagaagaaagtgtgcac 632 |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 15514131 cctttactacatgtagaacaaaccgttcaagatccaagcagcgaagaagaaagtgtgcac 15514072 Query: 633 caacaacaaccataactgggcgcccttca 661 |||||||||||||||| ||||| |||||| Sbjct: 15514071 caacaacaaccataaccgggcgtccttca 15514043 Score = 109 bits (55), Expect = 1e-20 Identities = 85/95 (89%) Strand = Plus / Minus Query: 268 ctgaaagacaaaatctggaatagttaattgttcgcgtggaacatatctgaacagttgcac 327 ||||||||||||||| |||||||||| |||||||||||| |||||||||||||| ||||| Sbjct: 15514933 ctgaaagacaaaatcaggaatagttagttgttcgcgtggtacatatctgaacagatgcac 15514874 Query: 328 gagcctgtcaacatacacaactttcttccatacct 362 ||||| || || || |||||||||||||| |||| Sbjct: 15514873 aagcctatccacgtagacaactttcttccaaacct 15514839 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 186 atcaaccagatggtctctgatagatatgttttgttcttgggtccacaatcatgcccctac 245 |||| ||||| ||||||||||| || ||||||||||||||||| ||||| | ||| || | Sbjct: 15515102 atcagccagacggtctctgataaatgtgttttgttcttgggtcaacaattaggcctctcc 15515043 Query: 246 caccattcacctccaaatcatgc 268 |||| |||||||||||||||||| Sbjct: 15515042 caccgttcacctccaaatcatgc 15515020 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 505 cggttgtaatgatgctgctgagtggagatagacaatagtatacggcttctgaatcaaagg 564 ||||||||||||||| || || |||| ||||||||| |||| ||||||||||||||||| Sbjct: 15514421 cggttgtaatgatgcagcagaatggaaatagacaatgctatatggcttctgaatcaaagg 15514362 Query: 565 ttcaaactcct 575 ||||||||||| Sbjct: 15514361 ttcaaactcct 15514351 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 435 catgaaggttccgctggtgtttccgacctaatatttgttgtatccgtttcataaatccta 494 |||||||||| ||||| ||||| ||||| ||||||||||||| || ||||| ||||||| Sbjct: 15514589 catgaaggttgcgctgatgtttacgacccaatatttgttgtaggcgcttcatgaatccta 15514530 Query: 495 aatctggttgc 505 ||||||||||| Sbjct: 15514529 aatctggttgc 15514519 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 357 atacctctccatcaattaaaagctgcatccccagaatagctgttctcaaccccaaggttg 416 ||||||||||||||| || | |||||| ||||||||||||||||||| ||||| |||| Sbjct: 15514748 atacctctccatcaacaaacatctgcattgccagaatagctgttctcaaacccaacgttg 15514689 Query: 417 ggtggag 423 ||||||| Sbjct: 15514688 ggtggag 15514682
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 573 ccttcactacatgtagaacaaaccgttcaagatccaggcagcgaagaagaaagtgtgcac 632 |||| ||||||| ||||| ||| || |||||||||| |||||||| |||||||| |||| Sbjct: 2806665 cctttactacatatagaataaatcgctcaagatccaaacagcgaagtagaaagtgagcac 2806724 Query: 633 caacaacaaccataactgggcgcccttca 661 ||||||| |||||||| || ||||||||| Sbjct: 2806725 caacaaccaccataacaggacgcccttca 2806753 Score = 71.9 bits (36), Expect = 3e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 508 ttgtaatgatgctgctgagtggagatagacaatagtatacggcttctgaatcaaaggttc 567 |||||| |||||||||||||||| ||||||||| | || ||||| |||||||| ||||| Sbjct: 2805660 ttgtaaagatgctgctgagtggaaatagacaattgagtaaggcttttgaatcaatggttc 2805719 Query: 568 aaactcct 575 |||||||| Sbjct: 2805720 aaactcct 2805727 Score = 71.9 bits (36), Expect = 3e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 435 catgaaggttccgctggtgtttccgacctaatatttgttgtatccgtttcataaatccta 494 ||||||| || ||||| || |||||||||||||||||||| | ||| ||||| ||||||| Sbjct: 2805494 catgaagattgcgctgatgcttccgacctaatatttgttgcaaccgcttcatgaatccta 2805553 Query: 495 aatctggt 502 |||||||| Sbjct: 2805554 aatctggt 2805561 Score = 69.9 bits (35), Expect = 1e-08 Identities = 77/91 (84%) Strand = Plus / Plus Query: 272 aagacaaaatctggaatagttaattgttcgcgtggaacatatctgaacagttgcacgagc 331 ||||||||||| ||||| || | |||||| ||||| || ||||||||||| ||||| || Sbjct: 2805148 aagacaaaatcaggaattgtcagttgttcacgtggtacgtatctgaacagctgcacaagt 2805207 Query: 332 ctgtcaacatacacaactttcttccatacct 362 ||||| ||||| | |||||||||||| |||| Sbjct: 2805208 ctgtcgacatagataactttcttccagacct 2805238 Score = 46.1 bits (23), Expect = 0.15 Identities = 53/63 (84%) Strand = Plus / Plus Query: 358 tacctctccatcaattaaaagctgcatccccagaatagctgttctcaaccccaaggttgg 417 |||||| ||||||| |||||||||| ||| |||||||||||||| ||||| ||||| Sbjct: 2805329 tacctccccatcaacgaaaagctgcaaagccaatatagctgttctcaatcccaaagttgg 2805388 Query: 418 gtg 420 ||| Sbjct: 2805389 gtg 2805391 Score = 46.1 bits (23), Expect = 0.15 Identities = 68/83 (81%) Strand = Plus / Plus Query: 186 atcaaccagatggtctctgatagatatgttttgttcttgggtccacaatcatgcccctac 245 ||||||| |||||||| || |||| ||| |||||||| ||||| | || |||||| | | Sbjct: 2804982 atcaacctgatggtctttggtagacatgctttgttctagggtcaattattatgccctttc 2805041 Query: 246 caccattcacctccaaatcatgc 268 |||||||||| || | ||||||| Sbjct: 2805042 caccattcacttcgagatcatgc 2805064
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 573 ccttcactacatgtagaacaaaccgttcaagatccaggcagcgaagaagaaagtgtgcac 632 |||| ||||||| ||||| ||| || |||||||||| |||||||| |||||||| |||| Sbjct: 2806776 cctttactacatatagaataaatcgctcaagatccaaacagcgaagtagaaagtgagcac 2806835 Query: 633 caacaacaaccataactgggcgcccttca 661 ||||||| |||||||| || ||||||||| Sbjct: 2806836 caacaaccaccataacaggacgcccttca 2806864 Score = 71.9 bits (36), Expect = 3e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 508 ttgtaatgatgctgctgagtggagatagacaatagtatacggcttctgaatcaaaggttc 567 |||||| |||||||||||||||| ||||||||| | || ||||| |||||||| ||||| Sbjct: 2805771 ttgtaaagatgctgctgagtggaaatagacaattgagtaaggcttttgaatcaatggttc 2805830 Query: 568 aaactcct 575 |||||||| Sbjct: 2805831 aaactcct 2805838 Score = 71.9 bits (36), Expect = 3e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 435 catgaaggttccgctggtgtttccgacctaatatttgttgtatccgtttcataaatccta 494 ||||||| || ||||| || |||||||||||||||||||| | ||| ||||| ||||||| Sbjct: 2805605 catgaagattgcgctgatgcttccgacctaatatttgttgcaaccgcttcatgaatccta 2805664 Query: 495 aatctggt 502 |||||||| Sbjct: 2805665 aatctggt 2805672 Score = 69.9 bits (35), Expect = 1e-08 Identities = 77/91 (84%) Strand = Plus / Plus Query: 272 aagacaaaatctggaatagttaattgttcgcgtggaacatatctgaacagttgcacgagc 331 ||||||||||| ||||| || | |||||| ||||| || ||||||||||| ||||| || Sbjct: 2805259 aagacaaaatcaggaattgtcagttgttcacgtggtacgtatctgaacagctgcacaagt 2805318 Query: 332 ctgtcaacatacacaactttcttccatacct 362 ||||| ||||| | |||||||||||| |||| Sbjct: 2805319 ctgtcgacatagataactttcttccagacct 2805349 Score = 46.1 bits (23), Expect = 0.15 Identities = 53/63 (84%) Strand = Plus / Plus Query: 358 tacctctccatcaattaaaagctgcatccccagaatagctgttctcaaccccaaggttgg 417 |||||| ||||||| |||||||||| ||| |||||||||||||| ||||| ||||| Sbjct: 2805440 tacctccccatcaacgaaaagctgcaaagccaatatagctgttctcaatcccaaagttgg 2805499 Query: 418 gtg 420 ||| Sbjct: 2805500 gtg 2805502 Score = 46.1 bits (23), Expect = 0.15 Identities = 68/83 (81%) Strand = Plus / Plus Query: 186 atcaaccagatggtctctgatagatatgttttgttcttgggtccacaatcatgcccctac 245 ||||||| |||||||| || |||| ||| |||||||| ||||| | || |||||| | | Sbjct: 2805093 atcaacctgatggtctttggtagacatgctttgttctagggtcaattattatgccctttc 2805152 Query: 246 caccattcacctccaaatcatgc 268 |||||||||| || | ||||||| Sbjct: 2805153 caccattcacttcgagatcatgc 2805175
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 573 ccttcactacatgtagaacaaaccgttcaagatccaggcagcgaagaagaaagtgtgcac 632 |||| ||||||| ||||| ||| || |||||||||| |||||||| |||||||| |||| Sbjct: 78621 cctttactacatatagaataaatcgctcaagatccaaacagcgaagtagaaagtgagcac 78680 Query: 633 caacaacaaccataactgggcgcccttca 661 ||||||| |||||||| || ||||||||| Sbjct: 78681 caacaaccaccataacaggacgcccttca 78709 Score = 71.9 bits (36), Expect = 3e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 508 ttgtaatgatgctgctgagtggagatagacaatagtatacggcttctgaatcaaaggttc 567 |||||| |||||||||||||||| ||||||||| | || ||||| |||||||| ||||| Sbjct: 77616 ttgtaaagatgctgctgagtggaaatagacaattgagtaaggcttttgaatcaatggttc 77675 Query: 568 aaactcct 575 |||||||| Sbjct: 77676 aaactcct 77683 Score = 71.9 bits (36), Expect = 3e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 435 catgaaggttccgctggtgtttccgacctaatatttgttgtatccgtttcataaatccta 494 ||||||| || ||||| || |||||||||||||||||||| | ||| ||||| ||||||| Sbjct: 77450 catgaagattgcgctgatgcttccgacctaatatttgttgcaaccgcttcatgaatccta 77509 Query: 495 aatctggt 502 |||||||| Sbjct: 77510 aatctggt 77517 Score = 69.9 bits (35), Expect = 1e-08 Identities = 77/91 (84%) Strand = Plus / Plus Query: 272 aagacaaaatctggaatagttaattgttcgcgtggaacatatctgaacagttgcacgagc 331 ||||||||||| ||||| || | |||||| ||||| || ||||||||||| ||||| || Sbjct: 77104 aagacaaaatcaggaattgtcagttgttcacgtggtacgtatctgaacagctgcacaagt 77163 Query: 332 ctgtcaacatacacaactttcttccatacct 362 ||||| ||||| | |||||||||||| |||| Sbjct: 77164 ctgtcgacatagataactttcttccagacct 77194 Score = 46.1 bits (23), Expect = 0.15 Identities = 53/63 (84%) Strand = Plus / Plus Query: 358 tacctctccatcaattaaaagctgcatccccagaatagctgttctcaaccccaaggttgg 417 |||||| ||||||| |||||||||| ||| |||||||||||||| ||||| ||||| Sbjct: 77285 tacctccccatcaacgaaaagctgcaaagccaatatagctgttctcaatcccaaagttgg 77344 Query: 418 gtg 420 ||| Sbjct: 77345 gtg 77347 Score = 46.1 bits (23), Expect = 0.15 Identities = 68/83 (81%) Strand = Plus / Plus Query: 186 atcaaccagatggtctctgatagatatgttttgttcttgggtccacaatcatgcccctac 245 ||||||| |||||||| || |||| ||| |||||||| ||||| | || |||||| | | Sbjct: 76938 atcaacctgatggtctttggtagacatgctttgttctagggtcaattattatgccctttc 76997 Query: 246 caccattcacctccaaatcatgc 268 |||||||||| || | ||||||| Sbjct: 76998 caccattcacttcgagatcatgc 77020
>ref|NM_105601.2| Arabidopsis thaliana unknown protein AT1G69340 mRNA, complete cds Length = 2069 Score = 56.0 bits (28), Expect = 2e-04 Identities = 112/140 (80%) Strand = Plus / Minus Query: 437 tgaaggttccgctggtgtttccgacctaatatttgttgtatccgtttcataaatcctaaa 496 |||||||| ||||||||||| ||||| | ||| |||| || | |||||| |||| ||| Sbjct: 1648 tgaaggttacgctggtgttttcgaccaagtatctgttctaatcttttcatccatcccaaa 1589 Query: 497 tctggttgcggttgtaatgatgctgctgagtggagatagacaatagtatacggcttctga 556 |||||||| |||||| |||||||| || || | |||||||| | ||| ||||| || Sbjct: 1588 tctggttggacttgtaacgatgctgcagaatgaaagtagacaatcgaataaggcttttgt 1529 Query: 557 atcaaaggttcaaactcctt 576 |||| ||||||||| ||||| Sbjct: 1528 atcacaggttcaaattcctt 1509
>gb|AY056390.1| Arabidopsis thaliana At1g69340/F10D13.28 mRNA, complete cds Length = 2020 Score = 56.0 bits (28), Expect = 2e-04 Identities = 112/140 (80%) Strand = Plus / Minus Query: 437 tgaaggttccgctggtgtttccgacctaatatttgttgtatccgtttcataaatcctaaa 496 |||||||| ||||||||||| ||||| | ||| |||| || | |||||| |||| ||| Sbjct: 1650 tgaaggttacgctggtgttttcgaccaagtatctgttctaatcttttcatccatcccaaa 1591 Query: 497 tctggttgcggttgtaatgatgctgctgagtggagatagacaatagtatacggcttctga 556 |||||||| |||||| |||||||| || || | |||||||| | ||| ||||| || Sbjct: 1590 tctggttggacttgtaacgatgctgcagaatgaaagtagacaatcgaataaggcttttgt 1531 Query: 557 atcaaaggttcaaactcctt 576 |||| ||||||||| ||||| Sbjct: 1530 atcacaggttcaaattcctt 1511
>gb|AF372923.1|AF372923 Arabidopsis thaliana At1g69340/F10D13.28 mRNA, complete cds Length = 2004 Score = 56.0 bits (28), Expect = 2e-04 Identities = 112/140 (80%) Strand = Plus / Minus Query: 437 tgaaggttccgctggtgtttccgacctaatatttgttgtatccgtttcataaatcctaaa 496 |||||||| ||||||||||| ||||| | ||| |||| || | |||||| |||| ||| Sbjct: 1582 tgaaggttacgctggtgttttcgaccaagtatctgttctaatcttttcatccatcccaaa 1523 Query: 497 tctggttgcggttgtaatgatgctgctgagtggagatagacaatagtatacggcttctga 556 |||||||| |||||| |||||||| || || | |||||||| | ||| ||||| || Sbjct: 1522 tctggttggacttgtaacgatgctgcagaatgaaagtagacaatcgaataaggcttttgt 1463 Query: 557 atcaaaggttcaaactcctt 576 |||| ||||||||| ||||| Sbjct: 1462 atcacaggttcaaattcctt 1443
>emb|BX817053.1|CNS0ADXJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH82ZF04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2020 Score = 56.0 bits (28), Expect = 2e-04 Identities = 112/140 (80%) Strand = Plus / Minus Query: 437 tgaaggttccgctggtgtttccgacctaatatttgttgtatccgtttcataaatcctaaa 496 |||||||| ||||||||||| ||||| | ||| |||| || | |||||| |||| ||| Sbjct: 1641 tgaaggttacgctggtgttttcgaccaagtatctgttctaatcttttcatccatcccaaa 1582 Query: 497 tctggttgcggttgtaatgatgctgctgagtggagatagacaatagtatacggcttctga 556 |||||||| |||||| |||||||| || || | |||||||| | ||| ||||| || Sbjct: 1581 tctggttggacttgtaacgatgctgcagaatgaaagtagacaatcgaataaggcttttgt 1522 Query: 557 atcaaaggttcaaactcctt 576 |||| ||||||||| ||||| Sbjct: 1521 atcacaggttcaaattcctt 1502
>emb|BX814576.1|CNS0AC62 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB81ZH05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1969 Score = 56.0 bits (28), Expect = 2e-04 Identities = 112/140 (80%) Strand = Plus / Minus Query: 437 tgaaggttccgctggtgtttccgacctaatatttgttgtatccgtttcataaatcctaaa 496 |||||||| ||||||||||| ||||| | ||| |||| || | |||||| |||| ||| Sbjct: 1628 tgaaggttacgctggtgttttcgaccaagtatctgttctaatcttttcatccatcccaaa 1569 Query: 497 tctggttgcggttgtaatgatgctgctgagtggagatagacaatagtatacggcttctga 556 |||||||| |||||| |||||||| || || | |||||||| | ||| ||||| || Sbjct: 1568 tctggttggacttgtaacgatgctgcagaatgaaagtagacaatcgaataaggcttttgt 1509 Query: 557 atcaaaggttcaaactcctt 576 |||| ||||||||| ||||| Sbjct: 1508 atcacaggttcaaattcctt 1489
>emb|BX816665.1|CNS0ABL8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH61ZE09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 877 Score = 56.0 bits (28), Expect = 2e-04 Identities = 112/140 (80%) Strand = Plus / Minus Query: 437 tgaaggttccgctggtgtttccgacctaatatttgttgtatccgtttcataaatcctaaa 496 |||||||| ||||||||||| ||||| | ||| |||| || | |||||| |||| ||| Sbjct: 498 tgaaggttacgctggtgttttcgaccaagtatctgttctaatcttttcatccatcccaaa 439 Query: 497 tctggttgcggttgtaatgatgctgctgagtggagatagacaatagtatacggcttctga 556 |||||||| |||||| |||||||| || || | |||||||| | ||| ||||| || Sbjct: 438 tctggttggacttgtaacgatgctgcagaatgaaagtagacaatcgaataaggcttttgt 379 Query: 557 atcaaaggttcaaactcctt 576 |||| ||||||||| ||||| Sbjct: 378 atcacaggttcaaattcctt 359
>gb|BT002710.1| Arabidopsis thaliana At1g69340/F10D13.28 gene, complete cds Length = 1689 Score = 56.0 bits (28), Expect = 2e-04 Identities = 112/140 (80%) Strand = Plus / Minus Query: 437 tgaaggttccgctggtgtttccgacctaatatttgttgtatccgtttcataaatcctaaa 496 |||||||| ||||||||||| ||||| | ||| |||| || | |||||| |||| ||| Sbjct: 1445 tgaaggttacgctggtgttttcgaccaagtatctgttctaatcttttcatccatcccaaa 1386 Query: 497 tctggttgcggttgtaatgatgctgctgagtggagatagacaatagtatacggcttctga 556 |||||||| |||||| |||||||| || || | |||||||| | ||| ||||| || Sbjct: 1385 tctggttggacttgtaacgatgctgcagaatgaaagtagacaatcgaataaggcttttgt 1326 Query: 557 atcaaaggttcaaactcctt 576 |||| ||||||||| ||||| Sbjct: 1325 atcacaggttcaaattcctt 1306
>gb|AC166650.7| Mus musculus chromosome 5, clone RP23-434O9, complete sequence Length = 207176 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 99 aagggaaaagagaaatatcaacaaag 124 |||||||||||||||| ||||||||| Sbjct: 133054 aagggaaaagagaaatctcaacaaag 133079
>gb|AC166649.5| Mus musculus chromosome 5, clone RP23-379D24, complete sequence Length = 176315 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Minus Query: 99 aagggaaaagagaaatatcaacaaag 124 |||||||||||||||| ||||||||| Sbjct: 92626 aagggaaaagagaaatctcaacaaag 92601
>gb|AC166648.4| Mus musculus chromosome 5, clone RP23-102C14, complete sequence Length = 203566 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 99 aagggaaaagagaaatatcaacaaag 124 |||||||||||||||| ||||||||| Sbjct: 162856 aagggaaaagagaaatctcaacaaag 162881
>gb|AC163328.6| Mus musculus chromosome 5, clone RP24-405J8, complete sequence Length = 141045 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 99 aagggaaaagagaaatatcaacaaag 124 |||||||||||||||| ||||||||| Sbjct: 88173 aagggaaaagagaaatctcaacaaag 88198
>gb|AC124483.4| Mus musculus BAC clone RP24-127J3 from chromosome 5, complete sequence Length = 134272 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 99 aagggaaaagagaaatatcaacaaag 124 |||||||||||||||| ||||||||| Sbjct: 19750 aagggaaaagagaaatctcaacaaag 19775
>gb|AC168210.13| Mus musculus chromosome 5, clone RP24-72J20, complete sequence Length = 193750 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Minus Query: 99 aagggaaaagagaaatatcaacaaag 124 |||||||||||||||| ||||||||| Sbjct: 112002 aagggaaaagagaaatctcaacaaag 111977
>gb|AC104396.7| Mus musculus BAC clone RP23-413J8 from chromosome 3, complete sequence Length = 195860 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 308 acatatctgaacagttgcacg 328 ||||||||||||||||||||| Sbjct: 105355 acatatctgaacagttgcacg 105335
>gb|AC133863.34| Medicago truncatula clone mth2-16f20, complete sequence Length = 139062 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 tatacaaacaataatcccctt 46 ||||||||||||||||||||| Sbjct: 24139 tatacaaacaataatcccctt 24159
>gb|AC144721.18| Medicago truncatula clone mth2-11o23, complete sequence Length = 135959 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 gttacaaagggaaaagagaaa 113 ||||||||||||||||||||| Sbjct: 59646 gttacaaagggaaaagagaaa 59626
>gb|AC147008.21| Medicago truncatula clone mth2-106d6, complete sequence Length = 144439 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 tatacaaacaataatcccctt 46 ||||||||||||||||||||| Sbjct: 111230 tatacaaacaataatcccctt 111210
>emb|AL953843.6| Zebrafish DNA sequence from clone DKEY-42P8 in linkage group 22, complete sequence Length = 212575 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 614 cgaagaagaaagtgtgcacca 634 ||||||||||||||||||||| Sbjct: 150692 cgaagaagaaagtgtgcacca 150672
>gb|AC147562.5| Mus musculus BAC clone RP23-239A13 from 3, complete sequence Length = 167633 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 308 acatatctgaacagttgcacg 328 ||||||||||||||||||||| Sbjct: 161361 acatatctgaacagttgcacg 161341
>gb|AC139218.10| Mus musculus chromosome 15, clone RP23-456O10, complete sequence Length = 163749 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 acaaagggaaaagagaaata 115 |||||||||||||||||||| Sbjct: 117005 acaaagggaaaagagaaata 117024
>gb|AC139675.11| Mus musculus chromosome 3, clone RP23-328D16, complete sequence Length = 204280 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 aaagacaaaatctggaatagttaa 294 ||||||| |||||||||||||||| Sbjct: 126513 aaagacacaatctggaatagttaa 126490
>gb|AC136702.19| Mus musculus chromosome 3, clone RP23-24N12, complete sequence Length = 209773 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 aaagacaaaatctggaatagttaa 294 ||||||| |||||||||||||||| Sbjct: 207980 aaagacacaatctggaatagttaa 207957
>gb|AF146793.2| Mus musculus Neuromedin U precursor (Nmu) gene, partial cds; PDCL2 (Pdcl2) gene, partial cds; CLOCK (Clock) gene, complete cds; TPARDL (Tpardl) gene, complete cds; and SRD5A2L (Srd5a2l) gene, complete cds Length = 204618 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 gtttcataaatcctaaatct 499 |||||||||||||||||||| Sbjct: 32354 gtttcataaatcctaaatct 32335
>gb|AC147239.2| Mus musculus BAC clone RP23-386C10 from chromosome 5, complete sequence Length = 217470 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 gtttcataaatcctaaatct 499 |||||||||||||||||||| Sbjct: 23766 gtttcataaatcctaaatct 23747
>gb|AC091278.6| Mus musculus chromosome 1, clone RP23-294D6, complete sequence Length = 244656 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 acaaagggaaaagagaaatatcaa 119 |||||||||||||| ||||||||| Sbjct: 109674 acaaagggaaaagaaaaatatcaa 109697
>gb|AC124468.3| Mus musculus BAC clone RP24-165F16 from chromosome 5, complete sequence Length = 169280 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 gtttcataaatcctaaatct 499 |||||||||||||||||||| Sbjct: 55381 gtttcataaatcctaaatct 55362
>gb|AC131729.3| Mus musculus BAC clone RP23-125B15 from 5, complete sequence Length = 209715 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 ctctccatcaattaaaagct 380 |||||||||||||||||||| Sbjct: 57595 ctctccatcaattaaaagct 57614
>gb|AC158750.5| Mus musculus chromosome 15, clone RP24-222C16, complete sequence Length = 128868 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 acaaagggaaaagagaaata 115 |||||||||||||||||||| Sbjct: 124270 acaaagggaaaagagaaata 124251
>gb|AC141324.1| Pan troglodytes BAC clone RP43-1G23 from 7, complete sequence Length = 173699 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ttaacatatacaaacaataa 39 |||||||||||||||||||| Sbjct: 120290 ttaacatatacaaacaataa 120271
>gb|AC146217.2| Pan troglodytes BAC clone RP43-33E1 from 7, complete sequence Length = 191426 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 ttaacatatacaaacaataa 39 |||||||||||||||||||| Sbjct: 33831 ttaacatatacaaacaataa 33850
>emb|AL354949.10| Human DNA sequence from clone RP11-82L20 on chromosome 1 Contains part of the NEGR1 gene for neuronal growth regulator 1 and a novel gene, complete sequence Length = 180569 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tcaacatacacaactttctt 354 |||||||||||||||||||| Sbjct: 37183 tcaacatacacaactttctt 37202
>emb|AL157365.19| Human DNA sequence from clone RP11-398G13 on chromosome 13, complete sequence Length = 36307 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 cataaatcctaaatctggtt 503 |||||||||||||||||||| Sbjct: 4630 cataaatcctaaatctggtt 4649
>emb|AL138834.28| Human DNA sequence from clone RP11-113A10 on chromosome 9 Contains three seven transmembrane helix receptor pseudogenes, a pseudogene similar to part of a seven transmembrane helix receptor, the RECK gene for reversion-inducing-cysteine-rich protein with kazal motifs (ST15, hRECK) and a CpG island, complete sequence Length = 123413 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 aacaaaggagtaattatacaaaga 141 ||||||| |||||||||||||||| Sbjct: 76189 aacaaagtagtaattatacaaaga 76166
>emb|AL135907.21| Human DNA sequence from clone RP1-257C19 on chromosome 6 Contains the 3' end of the gene for hypothetical protein FLJ14917 (contains FLJ13594), complete sequence Length = 45627 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 214 ttttgttcttgggtccacaatcat 237 ||||||||||| |||||||||||| Sbjct: 17762 ttttgttcttgtgtccacaatcat 17739
>emb|CR450738.8| Zebrafish DNA sequence from clone DKEY-71L10 in linkage group 8, complete sequence Length = 101924 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 267 gctgaaagacaaaatctggaatag 290 ||||||| |||||||||||||||| Sbjct: 8370 gctgaaaaacaaaatctggaatag 8393
>gb|AC069079.11| Homo sapiens chromosome 10 clone RP11-539E19, complete sequence Length = 216006 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 acaaagggaaaagagaaatatcaa 119 ||||||| |||||||||||||||| Sbjct: 20097 acaaaggtaaaagagaaatatcaa 20120
>emb|CR354582.14| Zebrafish DNA sequence from clone CH211-215B24 in linkage group 8, complete sequence Length = 227074 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 267 gctgaaagacaaaatctggaatag 290 ||||||| |||||||||||||||| Sbjct: 73763 gctgaaaaacaaaatctggaatag 73740
>gb|AC090610.6| Homo sapiens chromosome 17, clone RP11-493I24, complete sequence Length = 185980 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 90 ctagttacaaagggaaaagagaaa 113 |||||||||||||||||| ||||| Sbjct: 16370 ctagttacaaagggaaaatagaaa 16393
>gb|DQ430189.1| Sorghum bicolor voucher PI267539 locus pSB1812 genomic sequence Length = 635 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 atgatgctgctgagtggaga 532 |||||||||||||||||||| Sbjct: 275 atgatgctgctgagtggaga 294
>gb|DQ430188.1| Sorghum bicolor voucher PI267408 locus pSB1812 genomic sequence Length = 635 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 atgatgctgctgagtggaga 532 |||||||||||||||||||| Sbjct: 275 atgatgctgctgagtggaga 294
>gb|DQ430187.1| Sorghum bicolor voucher PI221607 locus pSB1812 genomic sequence Length = 635 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 atgatgctgctgagtggaga 532 |||||||||||||||||||| Sbjct: 275 atgatgctgctgagtggaga 294
>gb|DQ430185.1| Sorghum bicolor voucher NSL92371 locus pSB1812 genomic sequence Length = 635 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 atgatgctgctgagtggaga 532 |||||||||||||||||||| Sbjct: 275 atgatgctgctgagtggaga 294
>gb|DQ430184.1| Sorghum bicolor voucher NSL87902 locus pSB1812 genomic sequence Length = 635 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 atgatgctgctgagtggaga 532 |||||||||||||||||||| Sbjct: 275 atgatgctgctgagtggaga 294
>gb|DQ430183.1| Sorghum bicolor voucher NSL87666 locus pSB1812 genomic sequence Length = 635 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 atgatgctgctgagtggaga 532 |||||||||||||||||||| Sbjct: 275 atgatgctgctgagtggaga 294
>gb|DQ430181.1| Sorghum bicolor voucher NSL77034 locus pSB1812 genomic sequence Length = 635 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 atgatgctgctgagtggaga 532 |||||||||||||||||||| Sbjct: 275 atgatgctgctgagtggaga 294
>gb|DQ430180.1| Sorghum bicolor voucher NSL56174 locus pSB1812 genomic sequence Length = 635 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 atgatgctgctgagtggaga 532 |||||||||||||||||||| Sbjct: 275 atgatgctgctgagtggaga 294
>gb|DQ430179.1| Sorghum bicolor voucher NSL56003 locus pSB1812 genomic sequence Length = 635 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 atgatgctgctgagtggaga 532 |||||||||||||||||||| Sbjct: 275 atgatgctgctgagtggaga 294
>gb|DQ430178.1| Sorghum bicolor voucher NSL55243 locus pSB1812 genomic sequence Length = 635 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 atgatgctgctgagtggaga 532 |||||||||||||||||||| Sbjct: 275 atgatgctgctgagtggaga 294
>gb|DQ430177.1| Sorghum bicolor voucher NSL51365 locus pSB1812 genomic sequence Length = 635 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 atgatgctgctgagtggaga 532 |||||||||||||||||||| Sbjct: 275 atgatgctgctgagtggaga 294
>gb|DQ430176.1| Sorghum bicolor voucher NSL51030 locus pSB1812 genomic sequence Length = 635 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 atgatgctgctgagtggaga 532 |||||||||||||||||||| Sbjct: 275 atgatgctgctgagtggaga 294
>gb|DQ430175.1| Sorghum bicolor voucher NSL50875 locus pSB1812 genomic sequence Length = 635 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 atgatgctgctgagtggaga 532 |||||||||||||||||||| Sbjct: 275 atgatgctgctgagtggaga 294
>gb|AC175527.2| Mus musculus BAC clone RP24-324H8 from chromosome y, complete sequence Length = 252671 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 acatatctgaacagttgcac 327 |||||||||||||||||||| Sbjct: 140133 acatatctgaacagttgcac 140152
>gb|AC002091.2| Homo sapiens chromosome 17, clone CTB-41I6, complete sequence Length = 161816 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 90 ctagttacaaagggaaaagagaaa 113 |||||||||||||||||| ||||| Sbjct: 131524 ctagttacaaagggaaaatagaaa 131547
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 ggttccgctggtgtttccga 460 |||||||||||||||||||| Sbjct: 11018 ggttccgctggtgtttccga 11037
>emb|BX119984.15| Zebrafish DNA sequence from clone DKEY-257N17 in linkage group 1, complete sequence Length = 163978 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 523 tgagtggagatagacaatagtatacggc 550 |||||| ||||||||||||| ||||||| Sbjct: 155605 tgagtgaagatagacaataggatacggc 155632
>emb|BX511003.9| Zebrafish DNA sequence from clone CH211-69F16 in linkage group 1, complete sequence Length = 151271 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 523 tgagtggagatagacaatagtatacggc 550 |||||| ||||||||||||| ||||||| Sbjct: 17890 tgagtgaagatagacaataggatacggc 17917
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 tacctctccatcaattaaaa 377 |||||||||||||||||||| Sbjct: 22072786 tacctctccatcaattaaaa 22072805
>gb|AC027559.17| Homo sapiens chromosome 15, clone RP11-89K11, complete sequence Length = 130473 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 tgaaagacaaaatctggaat 288 |||||||||||||||||||| Sbjct: 20811 tgaaagacaaaatctggaat 20792
>gb|AC147328.4| Pan troglodytes BAC clone RP43-30N11 from chromosome 7, complete sequence Length = 207176 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 tgaaagacaaaatctggaat 288 |||||||||||||||||||| Sbjct: 151437 tgaaagacaaaatctggaat 151456
>gb|AC073178.9|AC073178 Arabidopsis thaliana chromosome 1 BAC F10D13 genomic sequence, complete sequence Length = 107214 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 339 catacacaactttcttccatacct 362 |||| ||||||||||||||||||| Sbjct: 12734 catatacaactttcttccatacct 12711 Score = 40.1 bits (20), Expect = 9.0 Identities = 56/68 (82%) Strand = Plus / Minus Query: 437 tgaaggttccgctggtgtttccgacctaatatttgttgtatccgtttcataaatcctaaa 496 |||||||| ||||||||||| ||||| | ||| |||| || | |||||| |||| ||| Sbjct: 12442 tgaaggttacgctggtgttttcgaccaagtatctgttctaatcttttcatccatcccaaa 12383 Query: 497 tctggttg 504 |||||||| Sbjct: 12382 tctggttg 12375
>gb|AC018364.5|AC018364 Arabidopsis thaliana chromosome 1 BAC F23O10 genomic sequence, complete sequence Length = 93802 Score = 40.1 bits (20), Expect = 9.0 Identities = 56/68 (82%) Strand = Plus / Plus Query: 437 tgaaggttccgctggtgtttccgacctaatatttgttgtatccgtttcataaatcctaaa 496 |||||||| ||||||||||| ||||| | ||| |||| || | |||||| |||| ||| Sbjct: 27789 tgaaggttacgctggtgttttcgaccaagtatctgttctaatcttttcatccatcccaaa 27848 Query: 497 tctggttg 504 |||||||| Sbjct: 27849 tctggttg 27856 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 339 catacacaactttcttccatacct 362 |||| ||||||||||||||||||| Sbjct: 27497 catatacaactttcttccatacct 27520
>gb|AC087231.1|AC087231 Caenorhabditis briggsae cosmid CB034P13, complete sequence Length = 71462 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 tacaaagggaaaagagaaat 114 |||||||||||||||||||| Sbjct: 19779 tacaaagggaaaagagaaat 19760
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 tgaacagttgcacgagcctg 334 |||||||||||||||||||| Sbjct: 2834017 tgaacagttgcacgagcctg 2834036
>dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0635G10 Length = 146728 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 tacctctccatcaattaaaa 377 |||||||||||||||||||| Sbjct: 114850 tacctctccatcaattaaaa 114869
>emb|BX648104.1|HSM808251 Homo sapiens mRNA; cDNA DKFZp686P2027 (from clone DKFZp686P2027) Length = 5167 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 214 ttttgttcttgggtccacaatcat 237 ||||||||||| |||||||||||| Sbjct: 1785 ttttgttcttgtgtccacaatcat 1808
>emb|AJ457210.1|VAL457210 Viscum album subsp. album partial mRNA for monosaccharide transporter (mst4 gene) Length = 246 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 604 atccaggcagcgaagaagaa 623 |||||||||||||||||||| Sbjct: 192 atccaggcagcgaagaagaa 173
>emb|CT033763.2| Medicago truncatula chromosome 5 clone mth2-139a2, COMPLETE SEQUENCE Length = 132108 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 aaagggaaaagagaaatatc 117 |||||||||||||||||||| Sbjct: 68197 aaagggaaaagagaaatatc 68178
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence Length = 2906179 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 aacaaaggagtaattatacaaaga 141 ||||||||| |||||||||||||| Sbjct: 2076276 aacaaaggattaattatacaaaga 2076253
>gb|AC131673.4| Mus musculus BAC clone RP23-321P21 from 1, complete sequence Length = 262190 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 acaaagggaaaagagaaatatcaa 119 |||||||||||||| ||||||||| Sbjct: 30001 acaaagggaaaagaaaaatatcaa 29978 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,960,457 Number of Sequences: 3902068 Number of extensions: 6960457 Number of successful extensions: 138491 Number of sequences better than 10.0: 79 Number of HSP's better than 10.0 without gapping: 79 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 138070 Number of HSP's gapped (non-prelim): 420 length of query: 661 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 638 effective length of database: 17,143,297,704 effective search space: 10937423935152 effective search space used: 10937423935152 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)