ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal1l19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009194.1| Triticum aestivum clone wle1.pk0002.c10:fis, full... 62 6e-07
2gb|AC099726.6| Mus musculus chromosome 7, clone RP23-342H24, com... 44 0.13
3gb|AC127696.4| Mus musculus BAC clone RP23-459J11 from chromosom... 44 0.13
4gb|AC110085.3| Homo sapiens BAC clone RP11-603P13 from 4, comple... 42 0.52
5gb|AY539861.1| Human rotavirus B strain WH-1 NSP2 gene, complete... 40 2.1
6gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14... 40 2.1
7gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete se... 40 2.1
8gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence 40 2.1
9gb|AC119266.14| Mus musculus chromosome 13, clone RP24-321G8, co... 40 2.1
10gb|AY238393.1| Human rotavirus B strain Bang373 nonstructural pr... 40 2.1
11gb|AY238383.1| Human rotavirus B strain CAL-1 nonstructural prot... 40 2.1
12emb|AJ867609.1| Human rotavirus B NSP2 gene for nonstructural pr... 40 2.1
13emb|CR626934.1| Triticum aestivum 40 2.1
14emb|Z78410.1|CEC51E3 Caenorhabditis elegans Cosmid C51E3, comple... 40 2.1
15emb|AL353707.14| Human DNA sequence from clone RP11-553J6 on chr... 40 2.1
16emb|CR356239.11| Zebrafish DNA sequence from clone DKEY-147F3 in... 40 2.1
17emb|X65606.1|HVBKIN12G H.vulgare BKIN12 gene for protein kinase 40 2.1
18emb|CR589943.13| Zebrafish DNA sequence from clone DKEYP-73C8 in... 40 2.1
19emb|BX005238.8| Zebrafish DNA sequence from clone DKEY-61P9 in l... 40 2.1
20emb|CR450716.5| Zebrafish DNA sequence from clone DKEYP-84G1 in ... 40 2.1
21emb|BX769174.7| Zebrafish DNA sequence from clone DKEY-246O14, c... 40 2.1
22gb|AC097062.2| Homo sapiens chromosome 1 clone RP11-428D12, comp... 40 2.1
23gb|AY941792.1| Human rotavirus B strain CAL-6 nonstructural prot... 40 2.1
24gb|AY941791.1| Human rotavirus B strain CAL-34 nonstructural pro... 40 2.1
25gb|AY941789.1| Human rotavirus B strain CAL-16 nonstructural pro... 40 2.1
26gb|AY941779.1| Human rotavirus B strain CAL-41 nonstructural pro... 40 2.1
27gb|AY941778.1| Human rotavirus B strain CAL-14 nonstructural pro... 40 2.1
28gb|AY941777.1| Human rotavirus B strain CAL-28 nonstructural pro... 40 2.1
29gb|AY941776.1| Human rotavirus B strain CAL-17 nonstructural pro... 40 2.1
30emb|BX571849.18| Zebrafish DNA sequence from clone DKEY-185N1 in... 40 2.1
31gb|AF205850.1|AF205850 Human rotavirus B strain CAL-1 segment 8 ... 40 2.1
32gb|AF277253.1|AF277253 Australopyrum velutinum isolate H6724 dis... 40 2.1
33gb|AY212934.2| Human rotavirus B strain WH1 nonstructural protei... 40 2.1
34gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (L... 40 2.1
35emb|BX784032.4| Zebrafish DNA sequence from clone CH211-87N12 in... 40 2.1
36emb|BX119915.8| Zebrafish DNA sequence from clone CH211-10J20 in... 40 2.1
37emb|AM180252.1| Lawsonia intracellularis PHE/MN1-00 40 2.1
38gb|AY864914.1| Human rotavirus B strain CAL-10 nonstructural pro... 40 2.1
39gb|AY864913.1| Human rotavirus B strain CAL-8 nonstructural prot... 40 2.1
40emb|AL929578.4| Zebrafish DNA sequence from clone CH211-189L6, c... 40 2.1
41gb|M91437.1|ROHNONSTRC Human rotavirus non-structural protein mR... 40 2.1
42gb|AY699070.1| Haemonchus contortus clone G4 putative serine/thr... 38 8.1
43gb|AY652953.1| Lyngbya majuscula strain 19L curacin biosynthesis... 38 8.1
44gb|AC116595.4| Mus musculus BAC clone RP24-127G9 from chromosome... 38 8.1
45gb|AY374448.1| Bacteriophage phiKO2, complete genome 38 8.1
46emb|CT009488.4| M.truncatula DNA sequence from clone MTH2-70J8 o... 38 8.1
47emb|AM075827.1| Triticum aestivum mRNA for beclin 1 protein (atg... 38 8.1
48gb|AE014305.1| Homo sapiens chromosome 13q34 schizophrenia regio... 38 8.1
49emb|AL353620.11| Human DNA sequence from clone RP11-485E1 on chr... 38 8.1
50emb|AL161738.15| Human DNA sequence from clone RP11-549G1 on chr... 38 8.1
51ref|XM_790268.1| PREDICTED: Strongylocentrotus purpuratus simila... 38 8.1
52gb|AE008799.1| Salmonella typhimurium LT2, section 103 of 220 of... 38 8.1
53gb|AC153155.6| Mus musculus BAC clone RP23-25J23 from chromosome... 38 8.1
54gb|BC040544.2| Homo sapiens hypothetical gene supported by BC040... 38 8.1
55emb|AL808108.3| Zebrafish DNA sequence from clone CH211-240L14 i... 38 8.1
56gb|DQ146421.1| Triticum monococcum strain PI503874 VRN1 (VRN1) g... 38 8.1
57gb|DQ146422.1| Triticum monococcum strain PI326317 VRN1 (VRN1) g... 38 8.1
58gb|DQ146423.1| Triticum monococcum strain PI306540 VRN1 (VRN1) g... 38 8.1
59gb|AC115627.4| Homo sapiens BAC clone RP11-707A18 from 4, comple... 38 8.1
60gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A1... 38 8.1
61dbj|AK045690.1| Mus musculus adult male corpora quadrigemina cDN... 38 8.1
62gb|AY036610.1| Triticum aestivum beclin1-like protein mRNA, comp... 38 8.1
63gb|AF277249.1|AF277249 Taeniatherum caput-medusae isolate H10254... 38 8.1
64gb|AC134620.4| Homo sapiens BAC clone RP11-1432C17 from 4, compl... 38 8.1
65gb|AC155944.3| Mus musculus 6 BAC RP24-493P12 (Roswell Park Canc... 38 8.1
66emb|CR383663.5| Zebrafish DNA sequence from clone CH211-124G24 i... 38 8.1
67gb|AC109499.21| Mus musculus chromosome 18, clone RP23-349E12, c... 38 8.1
68dbj|AP006111.1| Lotus japonicus genomic DNA, chromosome 3, clone... 38 8.1
69dbj|AB010878.1| Nicotiana tabacum mRNA for chloroplast ribosomal... 38 8.1 
>gb|BT009194.1| Triticum aestivum clone wle1.pk0002.c10:fis, full insert mRNA
            sequence
          Length = 1291

 Score = 61.9 bits (31), Expect = 6e-07
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                       
Query: 101  tgtccaacatccaatcttcaaacatttcctgaaaacaaacccg 143
            |||||||||||||||| |||||||| || ||||||||||||||
Sbjct: 1113 tgtccaacatccaatcctcaaacatatcttgaaaacaaacccg 1071



 Score = 40.1 bits (20), Expect = 2.1
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 1    tacaaaaggttattccgcgtcaataatcttcaaact 36
            ||||||| ||||||||||||  | ||||||||||||
Sbjct: 1184 tacaaaaagttattccgcgttgacaatcttcaaact 1149
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>gb|AC099726.6| Mus musculus chromosome 7, clone RP23-342H24, complete sequence
          Length = 217218

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 20     tcaataatcttcaaactgttta 41
              ||||||||||||||||||||||
Sbjct: 163619 tcaataatcttcaaactgttta 163640
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>gb|AC127696.4| Mus musculus BAC clone RP23-459J11 from chromosome 7, complete sequence
          Length = 168580

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 20    tcaataatcttcaaactgttta 41
             ||||||||||||||||||||||
Sbjct: 81433 tcaataatcttcaaactgttta 81454
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>gb|AC110085.3| Homo sapiens BAC clone RP11-603P13 from 4, complete sequence
          Length = 80015

 Score = 42.1 bits (21), Expect = 0.52
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 21   caataatcttcaaactgttta 41
            |||||||||||||||||||||
Sbjct: 2029 caataatcttcaaactgttta 2049
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>gb|AY539861.1| Human rotavirus B strain WH-1 NSP2 gene, complete cds
          Length = 1007

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 aatcttcaaacatttcctga 132
           ||||||||||||||||||||
Sbjct: 389 aatcttcaaacatttcctga 370
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>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence
          Length = 153766

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 71    tatttctttacagagggaatacaa 94
             |||||||||||| |||||||||||
Sbjct: 27038 tatttctttacatagggaatacaa 27061
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>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence
          Length = 285506

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 69   tatatttctttacagaggga 88
            ||||||||||||||||||||
Sbjct: 8851 tatatttctttacagaggga 8832
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>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence
          Length = 211664

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    tatatttctttacagaggga 88
             ||||||||||||||||||||
Sbjct: 61106 tatatttctttacagaggga 61125
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>gb|AC119266.14| Mus musculus chromosome 13, clone RP24-321G8, complete sequence
          Length = 174035

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 118   tcaaacatttcctgaaaacaaacc 141
             |||||||||||||||| |||||||
Sbjct: 89628 tcaaacatttcctgaagacaaacc 89605
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>gb|AY238393.1| Human rotavirus B strain Bang373 nonstructural protein (NSP2) gene,
           complete cds
          Length = 1007

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 aatcttcaaacatttcctga 132
           ||||||||||||||||||||
Sbjct: 389 aatcttcaaacatttcctga 370
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>gb|AY238383.1| Human rotavirus B strain CAL-1 nonstructural protein (NSP2) gene,
           complete cds
          Length = 1007

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 aatcttcaaacatttcctga 132
           ||||||||||||||||||||
Sbjct: 389 aatcttcaaacatttcctga 370
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>emb|AJ867609.1| Human rotavirus B NSP2 gene for nonstructural protein 2, strain
           ADRV
          Length = 975

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 aatcttcaaacatttcctga 132
           ||||||||||||||||||||
Sbjct: 368 aatcttcaaacatttcctga 349
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>emb|CR626934.1| Triticum aestivum
          Length = 94398

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    tatatttctttacagaggga 88
             ||||||||||||||||||||
Sbjct: 70987 tatatttctttacagaggga 71006
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>emb|Z78410.1|CEC51E3 Caenorhabditis elegans Cosmid C51E3, complete sequence
          Length = 32561

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   caaacatttcctgaaaacaa 138
             ||||||||||||||||||||
Sbjct: 14529 caaacatttcctgaaaacaa 14510
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>emb|AL353707.14| Human DNA sequence from clone RP11-553J6 on chromosome 9 Contains a
              ribosomal protein S19 (RPS19) pseudogene, complete sequence
          Length = 125373

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 120    aaacatttcctgaaaacaaa 139
              ||||||||||||||||||||
Sbjct: 109766 aaacatttcctgaaaacaaa 109747
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>emb|CR356239.11| Zebrafish DNA sequence from clone DKEY-147F3 in linkage group 23,
             complete sequence
          Length = 110120

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 114   atcttcaaacatttcctgaaaaca 137
             ||||| ||||||||||||||||||
Sbjct: 76649 atcttaaaacatttcctgaaaaca 76626
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>emb|X65606.1|HVBKIN12G H.vulgare BKIN12 gene for protein kinase
          Length = 5574

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 69   tatatttctttacagaggga 88
            ||||||||||||||||||||
Sbjct: 2281 tatatttctttacagaggga 2262
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>emb|CR589943.13| Zebrafish DNA sequence from clone DKEYP-73C8 in linkage group 18,
            complete sequence
          Length = 179531

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 114  atcttcaaacatttcctgaaaaca 137
            ||||| ||||||||||||||||||
Sbjct: 6482 atcttaaaacatttcctgaaaaca 6505
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>emb|BX005238.8| Zebrafish DNA sequence from clone DKEY-61P9 in linkage group 4 Contains
             three genes for a novel protein similar to vertebrate heat
             shock 70kDa protein 12A (Hspa12a), the gene for a novel
             protein similar to vertebrate guanylate nucleotide binding
             protein family,  the gene for a novel protein containing a
             beta-ketoacyl synthase, N-terminal domain, six novel genes
             and five CpG islands, complete sequence
          Length = 166866

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 114   atcttcaaacatttcctgaaaaca 137
             ||||| ||||||||||||||||||
Sbjct: 65815 atcttaaaacatttcctgaaaaca 65792



 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 114   atcttcaaacatttcctgaaaaca 137
             ||||| ||||||||||||||||||
Sbjct: 33551 atcttaaaacatttcctgaaaaca 33528
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>emb|CR450716.5| Zebrafish DNA sequence from clone DKEYP-84G1 in linkage group 18,
             complete sequence
          Length = 193900

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 114   atcttcaaacatttcctgaaaaca 137
             ||||| ||||||||||||||||||
Sbjct: 58274 atcttaaaacatttcctgaaaaca 58297
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>emb|BX769174.7| Zebrafish DNA sequence from clone DKEY-246O14, complete sequence
          Length = 187545

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 114    atcttcaaacatttcctgaaaaca 137
              ||||| ||||||||||||||||||
Sbjct: 147780 atcttaaaacatttcctgaaaaca 147757
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>gb|AC097062.2| Homo sapiens chromosome 1 clone RP11-428D12, complete sequence
          Length = 185700

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 69     tatatttctttacagaggga 88
              ||||||||||||||||||||
Sbjct: 124489 tatatttctttacagaggga 124470
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>gb|AY941792.1| Human rotavirus B strain CAL-6 nonstructural protein 2 (NSP2) gene,
           partial cds
          Length = 434

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 aatcttcaaacatttcctga 132
           ||||||||||||||||||||
Sbjct: 377 aatcttcaaacatttcctga 358
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>gb|AY941791.1| Human rotavirus B strain CAL-34 nonstructural protein 2 (NSP2)
           gene, partial cds
          Length = 434

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 aatcttcaaacatttcctga 132
           ||||||||||||||||||||
Sbjct: 377 aatcttcaaacatttcctga 358
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>gb|AY941789.1| Human rotavirus B strain CAL-16 nonstructural protein 2 (NSP2)
           gene, partial cds
          Length = 434

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 aatcttcaaacatttcctga 132
           ||||||||||||||||||||
Sbjct: 377 aatcttcaaacatttcctga 358
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>gb|AY941779.1| Human rotavirus B strain CAL-41 nonstructural protein 2 (NSP2)
           gene, partial cds
          Length = 434

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 aatcttcaaacatttcctga 132
           ||||||||||||||||||||
Sbjct: 377 aatcttcaaacatttcctga 358
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>gb|AY941778.1| Human rotavirus B strain CAL-14 nonstructural protein 2 (NSP2)
           gene, partial cds
          Length = 434

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 aatcttcaaacatttcctga 132
           ||||||||||||||||||||
Sbjct: 377 aatcttcaaacatttcctga 358
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>gb|AY941777.1| Human rotavirus B strain CAL-28 nonstructural protein 2 (NSP2)
           gene, partial cds
          Length = 434

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 aatcttcaaacatttcctga 132
           ||||||||||||||||||||
Sbjct: 377 aatcttcaaacatttcctga 358
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>gb|AY941776.1| Human rotavirus B strain CAL-17 nonstructural protein 2 (NSP2)
           gene, partial cds
          Length = 434

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 aatcttcaaacatttcctga 132
           ||||||||||||||||||||
Sbjct: 377 aatcttcaaacatttcctga 358
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>emb|BX571849.18| Zebrafish DNA sequence from clone DKEY-185N1 in linkage group 2,
             complete sequence
          Length = 128844

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 114   atcttcaaacatttcctgaaaaca 137
             ||||| ||||||||||||||||||
Sbjct: 77919 atcttaaaacatttcctgaaaaca 77942
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>gb|AF205850.1|AF205850 Human rotavirus B strain CAL-1 segment 8 putative nonstructural
           protein NSP2 gene, complete cds
          Length = 979

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 aatcttcaaacatttcctga 132
           ||||||||||||||||||||
Sbjct: 369 aatcttcaaacatttcctga 350
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>gb|AF277253.1|AF277253 Australopyrum velutinum isolate H6724 disrupted meiotic cDNA 1
           protein (DMC1) gene, partial cds
          Length = 1062

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 69  tatatttctttacagaggga 88
           ||||||||||||||||||||
Sbjct: 861 tatatttctttacagaggga 880



 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 69  tatatttctttacagaggga 88
           ||||||||||||||||||||
Sbjct: 827 tatatttctttacagaggga 808
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>gb|AY212934.2| Human rotavirus B strain WH1 nonstructural protein 2 gene, complete
           cds
          Length = 1007

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 aatcttcaaacatttcctga 132
           ||||||||||||||||||||
Sbjct: 389 aatcttcaaacatttcctga 370
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>gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (Lrr19), TAK19-1 (Tak19-1), and
             LRK19 (Lrk19) genes, complete cds
          Length = 35872

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    tatatttctttacagaggga 88
             ||||||||||||||||||||
Sbjct: 21715 tatatttctttacagaggga 21734
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>emb|BX784032.4| Zebrafish DNA sequence from clone CH211-87N12 in linkage group 18,
             complete sequence
          Length = 112053

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 114   atcttcaaacatttcctgaaaaca 137
             ||||| ||||||||||||||||||
Sbjct: 99876 atcttaaaacatttcctgaaaaca 99899
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>emb|BX119915.8| Zebrafish DNA sequence from clone CH211-10J20 in linkage group 20,
             complete sequence
          Length = 90306

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 114   atcttcaaacatttcctgaaaaca 137
             ||||| ||||||||||||||||||
Sbjct: 72723 atcttaaaacatttcctgaaaaca 72700
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>emb|AM180252.1| Lawsonia intracellularis PHE/MN1-00
          Length = 1457619

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 115    tcttcaaacatttcctgaaaacaa 138
              |||||||||||||||| |||||||
Sbjct: 995704 tcttcaaacatttcctcaaaacaa 995681
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>gb|AY864914.1| Human rotavirus B strain CAL-10 nonstructural protein 2 (NSP2)
           gene, partial cds
          Length = 446

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 aatcttcaaacatttcctga 132
           ||||||||||||||||||||
Sbjct: 389 aatcttcaaacatttcctga 370
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>gb|AY864913.1| Human rotavirus B strain CAL-8 nonstructural protein 2 (NSP2) gene,
           partial cds
          Length = 446

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 aatcttcaaacatttcctga 132
           ||||||||||||||||||||
Sbjct: 389 aatcttcaaacatttcctga 370
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>emb|AL929578.4| Zebrafish DNA sequence from clone CH211-189L6, complete sequence
          Length = 142570

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 114   atcttcaaacatttcctgaaaaca 137
             ||||| ||||||||||||||||||
Sbjct: 32609 atcttaaaacatttcctgaaaaca 32586
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>gb|M91437.1|ROHNONSTRC Human rotavirus non-structural protein mRNA, complete cds
          Length = 1006

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 aatcttcaaacatttcctga 132
           ||||||||||||||||||||
Sbjct: 389 aatcttcaaacatttcctga 370
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>gb|AY699070.1| Haemonchus contortus clone G4 putative serine/threonine kinase (stk)
            gene, exon 1 and partial cds, alternatively spliced
          Length = 5235

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 69   tatatttctttacagaggg 87
            |||||||||||||||||||
Sbjct: 1616 tatatttctttacagaggg 1598
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>gb|AY652953.1| Lyngbya majuscula strain 19L curacin biosynthesis gene cluster,
             complete sequence
          Length = 87427

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 114   atcttcaaacatttcctgaaaac 136
             ||||||| |||||||||||||||
Sbjct: 42858 atcttcagacatttcctgaaaac 42836
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>gb|AC116595.4| Mus musculus BAC clone RP24-127G9 from chromosome 18, complete sequence
          Length = 158788

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 111   ccaatcttcaaacatttcc 129
             |||||||||||||||||||
Sbjct: 49184 ccaatcttcaaacatttcc 49166
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>gb|AY374448.1| Bacteriophage phiKO2, complete genome
          Length = 51601

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 115   tcttcaaacatttcctgaa 133
             |||||||||||||||||||
Sbjct: 25735 tcttcaaacatttcctgaa 25753
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>emb|CT009488.4| M.truncatula DNA sequence from clone MTH2-70J8 on chromosome 3,
             complete sequence
          Length = 119377

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 15    ccgcgtcaataatcttcaa 33
             |||||||||||||||||||
Sbjct: 41798 ccgcgtcaataatcttcaa 41816
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>emb|AM075827.1| Triticum aestivum mRNA for beclin 1 protein (atg6 gene)
          Length = 2007

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 71   tatttctttacagagggaataca 93
            |||||||||||||||||| ||||
Sbjct: 1912 tatttctttacagagggagtaca 1890
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>gb|AE014305.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 2 of
              11 of the complete sequence
          Length = 613322

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 116    cttcaaacatttcctgaaa 134
              |||||||||||||||||||
Sbjct: 509169 cttcaaacatttcctgaaa 509151
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>emb|AL353620.11| Human DNA sequence from clone RP11-485E1 on chromosome 13, complete
             sequence
          Length = 139079

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 116   cttcaaacatttcctgaaa 134
             |||||||||||||||||||
Sbjct: 41844 cttcaaacatttcctgaaa 41826
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>emb|AL161738.15| Human DNA sequence from clone RP11-549G1 on chromosome 1q31.2-32.1,
            complete sequence
          Length = 148844

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 81   cagagggaatacaagatagctgt 103
            |||||||||| ||||||||||||
Sbjct: 2006 cagagggaattcaagatagctgt 1984
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>ref|XM_790268.1| PREDICTED: Strongylocentrotus purpuratus similar to c-myc promoter
           binding protein (LOC590671), partial mRNA
          Length = 765

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 115 tcttcaaacatttcctgaaaaca 137
           |||||||||| ||||||||||||
Sbjct: 62  tcttcaaacagttcctgaaaaca 84
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>gb|AE008799.1| Salmonella typhimurium LT2, section 103 of 220 of the complete genome
          Length = 20617

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 115   tcttcaaacatttcctgaa 133
             |||||||||||||||||||
Sbjct: 20388 tcttcaaacatttcctgaa 20370
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>gb|AC153155.6| Mus musculus BAC clone RP23-25J23 from chromosome 18, complete
            sequence
          Length = 227880

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 111  ccaatcttcaaacatttcc 129
            |||||||||||||||||||
Sbjct: 9628 ccaatcttcaaacatttcc 9646
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>gb|BC040544.2| Homo sapiens hypothetical gene supported by BC040544, mRNA (cDNA
            clone IMAGE:5274185)
          Length = 4115

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 22   aataatcttcaaactgtttacac 44
            |||||| ||||||||||||||||
Sbjct: 2139 aataatgttcaaactgtttacac 2161
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>emb|AL808108.3| Zebrafish DNA sequence from clone CH211-240L14 in linkage group 14
             Contains two novel genes, a novel gene similar to human
             GRHPR (glyoxylate reductase/hydroxypyruvate reductase), a
             novel gene similar to human C4orf1 (chromosome 4 open
             reading frame 1) and three CpG islands, complete sequence
          Length = 170556

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 96    atagctgtccaacatccaa 114
             |||||||||||||||||||
Sbjct: 78544 atagctgtccaacatccaa 78562
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>gb|DQ146421.1| Triticum monococcum strain PI503874 VRN1 (VRN1) gene, complete cds
          Length = 16224

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 69   tatatttctttacagagggaata 91
            ||||||||||||| |||||||||
Sbjct: 7064 tatatttctttacggagggaata 7042
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>gb|DQ146422.1| Triticum monococcum strain PI326317 VRN1 (VRN1) gene, complete cds
          Length = 15688

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 69   tatatttctttacagagggaata 91
            ||||||||||||| |||||||||
Sbjct: 6525 tatatttctttacggagggaata 6503
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>gb|DQ146423.1| Triticum monococcum strain PI306540 VRN1 (VRN1) gene, complete cds
          Length = 16209

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 69   tatatttctttacagagggaata 91
            ||||||||||||| |||||||||
Sbjct: 7047 tatatttctttacggagggaata 7025
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>gb|AC115627.4| Homo sapiens BAC clone RP11-707A18 from 4, complete sequence
          Length = 46960

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 22    aataatcttcaaactgtttacac 44
             |||||| ||||||||||||||||
Sbjct: 18421 aataatgttcaaactgtttacac 18399
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>gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A16, complete sequence
          Length = 133625

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 69    tatatttctttacagagggaata 91
             ||||||||||||| |||||||||
Sbjct: 73597 tatatttctttacggagggaata 73575
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>dbj|AK045690.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length
            enriched library, clone:B230304K20
            product:unclassifiable, full insert sequence
          Length = 2705

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 111  ccaatcttcaaacatttcc 129
            |||||||||||||||||||
Sbjct: 1679 ccaatcttcaaacatttcc 1661
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>gb|AY036610.1| Triticum aestivum beclin1-like protein mRNA, complete cds
          Length = 1957

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 71   tatttctttacagagggaataca 93
            |||||||||||||||||| ||||
Sbjct: 1862 tatttctttacagagggagtaca 1840
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>gb|AF277249.1|AF277249 Taeniatherum caput-medusae isolate H10254 disrupted meiotic cDNA 1
           protein (DMC1) gene, partial cds
          Length = 1080

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 69  tatatttctttacagaggg 87
           |||||||||||||||||||
Sbjct: 864 tatatttctttacagaggg 882
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>gb|AC134620.4| Homo sapiens BAC clone RP11-1432C17 from 4, complete sequence
          Length = 80150

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 124   atttcctgaaaacaaaccc 142
             |||||||||||||||||||
Sbjct: 51339 atttcctgaaaacaaaccc 51357
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>gb|AC155944.3| Mus musculus 6 BAC RP24-493P12 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 137474

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 117    ttcaaacatttcctgaaaa 135
              |||||||||||||||||||
Sbjct: 108359 ttcaaacatttcctgaaaa 108377
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>emb|CR383663.5| Zebrafish DNA sequence from clone CH211-124G24 in linkage group 20,
             complete sequence
          Length = 63867

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 116   cttcaaacatttcctgaaa 134
             |||||||||||||||||||
Sbjct: 20445 cttcaaacatttcctgaaa 20463
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>gb|AC109499.21| Mus musculus chromosome 18, clone RP23-349E12, complete sequence
          Length = 190594

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 121   aacatttcctgaaaacaaa 139
             |||||||||||||||||||
Sbjct: 96278 aacatttcctgaaaacaaa 96260
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>dbj|AP006111.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT45P14, TM0196a,
             complete sequence
          Length = 89377

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 93    aagatagctgtccaacatc 111
             |||||||||||||||||||
Sbjct: 81023 aagatagctgtccaacatc 81005
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>dbj|AB010878.1| Nicotiana tabacum mRNA for chloroplast ribosomal protein L4,
           complete cds
          Length = 1131

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 104 ccaacatccaatcttcaaa 122
           |||||||||||||||||||
Sbjct: 141 ccaacatccaatcttcaaa 159


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,910,861
Number of Sequences: 3902068
Number of extensions: 1910861
Number of successful extensions: 113016
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 112881
Number of HSP's gapped (non-prelim): 135
length of query: 167
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 145
effective length of database: 17,147,199,772
effective search space: 2486343966940
effective search space used: 2486343966940
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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