ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags31d13 |
|---|---|
| Clone Library Name | barley_pub |
>DGC14_HUMAN (Q96DF8) DGCR14 protein (DiGeorge syndrome critical region 14) (ES2| protein) Length = 476 Score = 73.6 bits (179), Expect = 5e-13 Identities = 49/151 (32%), Positives = 80/151 (52%), Gaps = 11/151 (7%) Frame = -3 Query: 649 PSPAPGADESPFMTWGDIDXTPLRLDPDETP--GGSERSHFKIPPPPVRDVKAHLLSRDA 476 PSPAPG +ESP MTWG+++ TPLR++ ETP + FKI P R+ ++ +A Sbjct: 304 PSPAPGVNESPMMTWGEVENTPLRVEGSETPYVDRTPGPAFKILEPGRRERLGLKMANEA 363 Query: 475 AKKIKARTHMFHKPPLPSPVRGGSASPRNLSPAAQKFVRNAIAK-STQTIDESLRASYRG 299 A K +A+ + + S +P+ LSPA ++ +++ +++ D +LRASY Sbjct: 364 AAKNRAKKQEALRRVTENL---ASLTPKGLSPAMSPALQRLVSRTASKYTDRALRASYTP 420 Query: 298 S--------TPSAGTPKTRFSTDPGLGSRSP 230 S TP++G + PG +R+P Sbjct: 421 SPARSTHLKTPASGLQTPTSTPAPGSATRTP 451
>DGC14_MOUSE (O70279) DGCR14 protein (DiGeorge syndrome critical region 14| homolog) (ES2 protein) (Expressed sequence 2 embryonic lethal) Length = 479 Score = 72.8 bits (177), Expect = 8e-13 Identities = 53/152 (34%), Positives = 83/152 (54%), Gaps = 12/152 (7%) Frame = -3 Query: 649 PSPAPGADESPFMTWGDIDXTPLRLDPDETP--GGSERSHFKIPPPPVRDVKAHLLSRDA 476 PSPAPG +ESP MTWG+++ TPLR++ E+P + FKI P R+ ++ +A Sbjct: 307 PSPAPGVNESPLMTWGEVENTPLRVEGSESPYVDRTPGPTFKILEPGRRERLGLKMANEA 366 Query: 475 AKKIKARTHMFHKPPLPSPVRGGSASPRNLSPAAQKFVRNAIAK-STQTIDESLRASYRG 299 A K +A+ + + S +P+ LSPA ++ +++ +++ D +LRASY Sbjct: 367 AAKNRAKKQEALRRVTENL---ASLTPKGLSPAMSPALQRLVSRTASKYTDRALRASYTP 423 Query: 298 S--------TPSAGTPKTRFSTD-PGLGSRSP 230 S TP AG P+T ST PG +R+P Sbjct: 424 SPARSSHLKTP-AGGPQTPTSTPAPGSATRTP 454
>DGC14_CAEEL (P34420) DGCR14 protein homolog (DiGeorge syndrome critical region| 14 homolog) Length = 531 Score = 55.8 bits (133), Expect = 1e-07 Identities = 51/162 (31%), Positives = 69/162 (42%), Gaps = 15/162 (9%) Frame = -3 Query: 649 PSPAPGADESPFMTWGDIDXTPLRLD-PDET----PGGSERSHFKIPPPPVRDVKAHLLS 485 P+P P +SP MTWG+ID TP RLD PD T PG + FKIP P R+ A ++ Sbjct: 332 PNPNPDDMDSPLMTWGEIDGTPFRLDAPDVTEHSLPGAA--PVFKIPEVPYREKIAQSMN 389 Query: 484 RDAAKKIKAR----------THMFHKPPLPSPVRGGSASPRNLSPAAQKFVRNAIAKSTQ 335 A K + + H P S + S LSPAAQK + Sbjct: 390 DSIAAKYRDKRKVAMRAAEGAHFSRTPGFGS--KRVSDKLAQLSPAAQKLATKKLGLKML 447 Query: 334 TIDESLRASYRGSTPSAGTPKTRFSTDPGLGSRSPSARKGST 209 +S AS + + + ++ ST PG S GS+ Sbjct: 448 PAHKSPFASPKIMSNWSRPSSSKRSTTPGSAWSRGSTTPGSS 489
>DGC14_DROME (O44424) DGCR14 protein homolog (ES2 protein) (dES2)| Length = 501 Score = 49.3 bits (116), Expect = 1e-05 Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 5/98 (5%) Frame = -3 Query: 649 PSPAPGADESPFMTWGDIDXTPLRLDPDETP-GGSERSHFKIPPPPVRDVKAHLLSRDAA 473 PSP PG SP MTWG+ID TP RLD +TP ++ F+I R+ A L+ + Sbjct: 318 PSPRPGEAFSPIMTWGEIDGTPFRLDGGDTPLRPTQGPSFRINENSRRENIAIALAERVS 377 Query: 472 KKIKARTHM---FHKPPLPSP-VRGGSASPRNLSPAAQ 371 ++++ + M + + SP +R ++SPAAQ Sbjct: 378 ERMRNQKQMALDTARRNIGSPLIRTNMERLASMSPAAQ 415
>RAVR1_MOUSE (Q9CW46) Protein raver-1| Length = 748 Score = 44.3 bits (103), Expect = 3e-04 Identities = 44/142 (30%), Positives = 61/142 (42%), Gaps = 11/142 (7%) Frame = -3 Query: 595 DXTPLRLDPDETPGGSERSHFKIPPPPVRDVKAHLLSRDAAKKI------KARTHMFHKP 434 D PL P + G ++IP P ++ + L S + A K R +P Sbjct: 488 DSGPLPTPPGVSLLGEPPKDYRIPLNPYLNLHSLLPSSNLAGKETRGWGGSGRGRRPAEP 547 Query: 433 PLPSP-VRGGSASPRNLSPAAQKFVR--NAIAKSTQTIDESLRASYRGSTPSAGTPKTRF 263 PLPSP V GG + N + A Q R + IA + + L SY P+ P+ F Sbjct: 548 PLPSPAVPGGGSGSNNGNKAFQMKSRLLSPIASNRLPPEPGLPDSYGFDYPTDVGPRRLF 607 Query: 262 S--TDPGLGSRSPSARKGSTPP 203 S +P LG+ PS K S PP Sbjct: 608 SHPREPTLGAHGPSRHKMSPPP 629
>RAVR1_RAT (Q5XI28) Protein raver-1| Length = 748 Score = 42.4 bits (98), Expect = 0.001 Identities = 47/160 (29%), Positives = 64/160 (40%), Gaps = 11/160 (6%) Frame = -3 Query: 649 PSPAPGADESPFMTWGDIDXTPLRLDPDETPGGSERSHFKIPPPPVRDVKAHLLSRDAAK 470 P PAP + D PL P + G ++IP P ++ + L S + A Sbjct: 470 PPPAPMGLRGSSLRGLPKDSGPLPTPPGVSLLGEPPKDYRIPLNPYLNLHSLLPSSNLAG 529 Query: 469 KI------KARTHMFHKPPLPSP-VRGGSASPRNLSPAAQKFVR--NAIAKSTQTIDESL 317 K R +PPLPSP V GG + N S A R + IA + + L Sbjct: 530 KETRGWGGSGRGRRPAEPPLPSPAVPGGGNASNNGSKAFPMKPRLLSPIASNRLPPEPGL 589 Query: 316 RASYRGSTPSAGTPKTRFS--TDPGLGSRSPSARKGSTPP 203 SY P+ P+ FS + LG+ PS K S PP Sbjct: 590 PDSYSFDYPTDVGPRRLFSHPRESNLGAHGPSRHKMSPPP 629
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 39.3 bits (90), Expect = 0.010 Identities = 42/149 (28%), Positives = 61/149 (40%), Gaps = 5/149 (3%) Frame = -3 Query: 634 GADESPFMTWGDIDXTPLRLDPDETPGGSERSHFKIPPPPVRDVKAHLLSRDAAKKIKAR 455 G S T I T +P TPG P PPV A + ++ + Sbjct: 2657 GTPPSLTTTATTITATGSTTNPSSTPGTR-------PIPPVLTTTATTPAATSSTVTPSS 2709 Query: 454 T-HMFHKPPLPSPVRGGSASPRNLSPAAQKFVRNAIAKSTQ----TIDESLRASYRGSTP 290 H PP+P+ + R+LSP++ VR A +T T + ++ TP Sbjct: 2710 ALGTTHTPPVPNTT--ATTHGRSLSPSSPHTVRTAWTSATSGTLGTTHITEPSTGTSHTP 2767 Query: 289 SAGTPKTRFSTDPGLGSRSPSARKGSTPP 203 +A T T+ ST P L S PS+R +PP Sbjct: 2768 AATTGTTQHST-PALSSPHPSSRTTESPP 2795 Score = 38.1 bits (87), Expect = 0.023 Identities = 39/148 (26%), Positives = 58/148 (39%), Gaps = 4/148 (2%) Frame = -3 Query: 634 GADESPFMTWGDIDXTPLRLDPDETPGGSERSHFKIPPPPVRDVKAHLLSRDAAKKIKAR 455 G S T I T +P TPG + PP + + + + Sbjct: 3884 GTPPSLITTATTITATGSTTNPSSTPGTTPI------PPELTTTATTPAATSSTVTPSSA 3937 Query: 454 THMFHKPPLPSPVRGGSASPRNLSPAAQKFVRNAIAKSTQ----TIDESLRASYRGSTPS 287 H PP+P+ + R+LSP++ VR A +T T + ++ TP+ Sbjct: 3938 LGTTHTPPVPNTT--ATTHGRSLSPSSPHTVRTAWTSATSGTLGTTHITEPSTGTSHTPA 3995 Query: 286 AGTPKTRFSTDPGLGSRSPSARKGSTPP 203 A T T ST P L S PS+R +PP Sbjct: 3996 ATTGTTTTST-PALSSPHPSSRTTESPP 4022 Score = 37.0 bits (84), Expect = 0.051 Identities = 41/149 (27%), Positives = 61/149 (40%), Gaps = 5/149 (3%) Frame = -3 Query: 634 GADESPFMTWGDIDXTPLRLDPDETPGGSERSHFKIPPPPVRDVKAHLLSRDAAKKIKAR 455 G S T I T +P TPG + P PPV A + ++ + Sbjct: 2128 GTPPSLTTTATTITATGSTTNPSSTPGTT-------PIPPVLTTTATTPAATSSTVTPSS 2180 Query: 454 T-HMFHKPPLPSPVRGGSASPRNLSPAAQKFVRNAIAKSTQTIDESLRASYRGS----TP 290 H PP+P+ + R+LSP++ V A +T I + + + TP Sbjct: 2181 ALGTTHTPPVPNTT--ATTHGRSLSPSSPHTVCTAWTSATSGILGTTHITEPSTGTSHTP 2238 Query: 289 SAGTPKTRFSTDPGLGSRSPSARKGSTPP 203 +A T T+ ST P L S PS+R +PP Sbjct: 2239 AATTGTTQHST-PALSSPHPSSRTTESPP 2266 Score = 35.0 bits (79), Expect = 0.19 Identities = 42/150 (28%), Positives = 59/150 (39%), Gaps = 6/150 (4%) Frame = -3 Query: 634 GADESPFMTWGDIDXTPLRLDPDETPGGSERSHFKIPPPPVRDVKAHLLSRDAAKKIKAR 455 G S T I T +P TPG + P PPV A + ++ + Sbjct: 3355 GTPPSLTTTATTITATGSTTNPSSTPGTT-------PIPPVLTTTATTPAATSSTVTPSS 3407 Query: 454 T-HMFHKPPLPSPV---RGGSASPRN--LSPAAQKFVRNAIAKSTQTIDESLRASYRGST 293 H PP+P+ G S P + P A + I +T + S S+ T Sbjct: 3408 ALGTTHTPPVPNTTATTHGRSLPPSSPHTVPTAWTSATSGILGTTHITEPSTGTSH---T 3464 Query: 292 PSAGTPKTRFSTDPGLGSRSPSARKGSTPP 203 P+A T T+ ST P L S PS+R +PP Sbjct: 3465 PAATTGTTQPST-PALSSPHPSSRTTESPP 3493
>ZYX_HUMAN (Q15942) Zyxin (Zyxin-2)| Length = 572 Score = 35.8 bits (81), Expect = 0.11 Identities = 42/170 (24%), Positives = 59/170 (34%), Gaps = 20/170 (11%) Frame = -3 Query: 649 PSPAPGADESPFMTWGDIDXTP---LRLDPDETPG------GSERSHFKIPPPPVRDVKA 497 P PAPGA + G+I P L P G G+ F PPPP+ Sbjct: 46 PPPAPGAQRAQMGRVGEIPPPPPEDFPLPPPPLAGDGDDAEGALGGAFPPPPPPI----- 100 Query: 496 HLLSRDAAKKIKARTHMFHKPPLPSPVRGGSASPRNLSPAAQKFVRN---AIAKSTQTID 326 ++ +F PP P GG +P P ++ V + I + +D Sbjct: 101 ----EESFPPAPLEEEIFPSPPPPPEEEGGPEAPIPPPPQPREKVSSIDLEIDSLSSLLD 156 Query: 325 E-------SLRASYRGSTPSAGTP-KTRFSTDPGLGSRSPSARKGSTPPW 200 + R S P TP ++ ST P G +P PPW Sbjct: 157 DMTKNDPFKARVSSGYVPPPVATPFSSKSSTKPAAGGTAP------LPPW 200
>CWC22_NEUCR (Q7RX84) Pre-mRNA-splicing factor cwc-22| Length = 1010 Score = 35.4 bits (80), Expect = 0.15 Identities = 32/117 (27%), Positives = 44/117 (37%) Frame = -3 Query: 553 GSERSHFKIPPPPVRDVKAHLLSRDAAKKIKARTHMFHKPPLPSPVRGGSASPRNLSPAA 374 GS + P PP RD + + + P PSP R S SPR+ P + Sbjct: 34 GSRSPGERTPSPPSRDPSPYRSPGE-------------RTPSPSPRRDRSLSPRD-QPHS 79 Query: 373 QKFVRNAIAKSTQTIDESLRASYRGSTPSAGTPKTRFSTDPGLGSRSPSARKGSTPP 203 R+ +S R S R +P G+P R +RSP R+ S P Sbjct: 80 HPRSRSPTPRS----QSPSRRSVRSPSPRQGSPARRVDRSSSPRARSPPPRRHSRSP 132
>YKR4_EBV (P30117) Hypothetical protein BKRF4| Length = 217 Score = 35.0 bits (79), Expect = 0.19 Identities = 34/127 (26%), Positives = 49/127 (38%), Gaps = 2/127 (1%) Frame = -3 Query: 643 PAPGADESPFMTWGDIDXTPL-RLDPDETPGGSERSHFKIPPPPVRDVKAHLLSRDAAKK 467 P+ G+D P D D + D DE GS+ S P + + ++ Sbjct: 74 PSEGSDSDPSWHPSDSDESDYSESDEDEATPGSQASRSSRVSPSTQQSSGLTPTPSFSRP 133 Query: 466 IKARTHMFHKPPLPSPVRG-GSASPRNLSPAAQKFVRNAIAKSTQTIDESLRASYRGSTP 290 RT +PP P+PVRG SA PR +P Q + T+ + LR P Sbjct: 134 ---RTRAPPRPPAPAPVRGRASAPPRPPAPVQQSTKDKGPHRPTRPV---LRGPAPRRPP 187 Query: 289 SAGTPKT 269 +P T Sbjct: 188 PPSSPNT 194
>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1| (Plenty-of-prolines 101) Length = 946 Score = 34.7 bits (78), Expect = 0.25 Identities = 47/155 (30%), Positives = 55/155 (35%), Gaps = 7/155 (4%) Frame = -3 Query: 649 PSPAPGADE-SPFMTWGDIDXTPL------RLDPDETPGGSERSHFKIPPPPVRDVKAHL 491 PSP E SP M G +P+ R P P RS PPPP Sbjct: 529 PSPRKRQKETSPRMQMGKRWQSPVTKSSRRRRSPSPPPARRRRSPSPAPPPPPPPPPPR- 587 Query: 490 LSRDAAKKIKARTHMFHKPPLPSPVRGGSASPRNLSPAAQKFVRNAIAKSTQTIDESLRA 311 R + RT P P P R S SPR SP Q+ + +T Sbjct: 588 RRRSPTPPPRRRT------PSPPP-RRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPP 640 Query: 310 SYRGSTPSAGTPKTRFSTDPGLGSRSPSARKGSTP 206 R S PS PK R S P RSP+ K +P Sbjct: 641 KRRAS-PSP-PPKRRVSHSPPPKQRSPTVTKRRSP 673 Score = 32.0 bits (71), Expect = 1.6 Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 4/129 (3%) Frame = -3 Query: 580 RLDPDETPGGSERSHFKIPPPPVRDVKAHLLSRDAAKKIKARTHMFHKPPLPSPVRGGSA 401 R P P R+ + PPP R H SR ++ + + S S+ Sbjct: 312 RPSPRRRPSPRRRTPPRRMPPPPR----HRRSRSPGRRRRRSSASL------SGSSSSSS 361 Query: 400 SPRNLSPAAQKFVRNAIA-KSTQTIDESL---RASYRGSTPSAGTPKTRFSTDPGLGSRS 233 S R+ SP + R + + T+ + S R +R S+P+ PKTR S P +R+ Sbjct: 362 SSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSSPATPPPKTRHSPTPQQSNRT 421 Query: 232 PSARKGSTP 206 +R +P Sbjct: 422 RKSRVSVSP 430
>CZOG1_MAIZE (Q93XP7) Cis-zeatin O-glucosyltransferase 1 (EC 2.4.1.215)| (cisZOG1) Length = 467 Score = 33.9 bits (76), Expect = 0.43 Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Frame = -3 Query: 538 HFKIPPPPVRDVKAHLLSRDAAKKIKARTHMFHKPPLPSP---VRGGSASPRNLSPAAQK 368 H+ PPP VR +A + D R H PP SP + S P +L P + Sbjct: 40 HYAAPPPHVRQARARVHGWDPRALGSIRFHDLDVPPYDSPAPDLAAPSPFPNHLMPMFEA 99 Query: 367 FVRNAIAKSTQTIDESLRASYR 302 F A A + + L SYR Sbjct: 100 FAAAARAPLAALL-QRLSTSYR 120
>K0182_HUMAN (Q14687) Protein KIAA0182 (Fragment)| Length = 1157 Score = 32.7 bits (73), Expect = 0.96 Identities = 33/132 (25%), Positives = 46/132 (34%), Gaps = 9/132 (6%) Frame = -3 Query: 646 SPAPGADESPFMTWGDIDXTPLRLDPDETPGGSERSH---------FKIPPPPVRDVKAH 494 SP P +P W + L+ S SH +P V V Sbjct: 512 SPKPQLHAAPTALWNPVSLMDNTLETRRAESHSLHSHPAAFEPSRQAAVPLVKVERVFCP 571 Query: 493 LLSRDAAKKIKARTHMFHKPPLPSPVRGGSASPRNLSPAAQKFVRNAIAKSTQTIDESLR 314 + + +K + ++PP P P GGS + P F+ + KSTQTI Sbjct: 572 EKAEEGPRKREPAPLDKYQPPPPPPREGGSLEHQPFLPGPGPFLAE-LEKSTQTI----L 626 Query: 313 ASYRGSTPSAGT 278 R S P A T Sbjct: 627 GQQRASLPQAAT 638
>RL4_THEVO (Q97BX6) 50S ribosomal protein L4P| Length = 255 Score = 32.7 bits (73), Expect = 0.96 Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Frame = -3 Query: 352 IAKSTQTIDESLRASYRGSTPSAGTPKTRFSTDPGLG-SRSPSARKGS 212 I K+ + I SLR Y GS+P AG + +T PGLG SR P GS Sbjct: 33 IRKAFRAISLSLRQPY-GSSPLAGLRRVGHTTKPGLGISRMPRIAGGS 79
>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1| Length = 888 Score = 32.7 bits (73), Expect = 0.96 Identities = 42/159 (26%), Positives = 58/159 (36%), Gaps = 11/159 (6%) Frame = -3 Query: 649 PSPAPGADESPFMTWGDIDXTPLRLDPDETPGGSERSHFKIPPPPVRDVKAHLLSRDAAK 470 PSP+P + + +P R +P + R PPPP R ++ L R Sbjct: 524 PSPSPRKRQK--------EPSPRRRRRSPSPPPARRRRSPSPPPPPRRRRSPSLPR---- 571 Query: 469 KIKARTHMFHKPPLPSPVRGGSASPRNLSPAAQKFVRNAIAKSTQTIDESLRASYRGSTP 290 + P P P R S SPR SP Q+ + +T R S P Sbjct: 572 ---------RRSPSPPP-RRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRAS-P 620 Query: 289 S-------AGTPKTRFSTDPGLGSRSPSA----RKGSTP 206 S + +P + + P RSPS RKGS P Sbjct: 621 SPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKHRKGSPP 659
>BCL9_HUMAN (O00512) B-cell lymphoma 9 protein (Bcl-9) (Legless homolog)| Length = 1426 Score = 32.7 bits (73), Expect = 0.96 Identities = 26/84 (30%), Positives = 37/84 (44%) Frame = -3 Query: 454 THMFHKPPLPSPVRGGSASPRNLSPAAQKFVRNAIAKSTQTIDESLRASYRGSTPSAGTP 275 T + PP+P+P +A PR L + V N + S + S G+ P++ TP Sbjct: 252 TRLQPTPPIPAPAPKPAAPPRPLDRESPG-VENKLIPSVGSPASSTPLPPDGTGPNS-TP 309 Query: 274 KTRFSTDPGLGSRSPSARKGSTPP 203 R T GS S SA + PP Sbjct: 310 NNRAVTPVSQGSNSSSADPKAPPP 333
>104K_THEPA (P15711) 104 kDa microneme-rhoptry antigen precursor (p104)| Length = 924 Score = 32.3 bits (72), Expect = 1.3 Identities = 28/108 (25%), Positives = 42/108 (38%) Frame = -3 Query: 526 PPPPVRDVKAHLLSRDAAKKIKARTHMFHKPPLPSPVRGGSASPRNLSPAAQKFVRNAIA 347 PPPP R + K IK KPP P P S + ++ R+ Sbjct: 620 PPPPTRPSSPE--RPEGTKIIKTS-----KPPSPKPPFDPSFKEKFYDDYSKAASRSKET 672 Query: 346 KSTQTIDESLRASYRGSTPSAGTPKTRFSTDPGLGSRSPSARKGSTPP 203 K+T +DES + + + P TP T F+T + + P + P Sbjct: 673 KTTVVLDESFESILKETLPE--TPGTPFTTPRPVPPKRPRTPESPFEP 718
>CETP_RABIT (P22687) Cholesteryl ester transfer protein precursor (Lipid| transfer protein I) (Fragment) Length = 497 Score = 32.3 bits (72), Expect = 1.3 Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 7/95 (7%) Frame = -3 Query: 535 FKIPPPPVRDVKAHLLSRDAAKKIKAR-------THMFHKPPLPSPVRGGSASPRNLSPA 377 F+ P P R+ A+ D ++A H+ +P+ R GS++ NLS A Sbjct: 350 FRFPRPDGREAVAYRFEEDIITTVQASYSQKKLFLHLLDFQCVPASGRAGSSA--NLSVA 407 Query: 376 AQKFVRNAIAKSTQTIDESLRASYRGSTPSAGTPK 272 + + A++ T++ ESL++S R + G P+ Sbjct: 408 LRTEAK-AVSNLTESRSESLQSSLRSLIATVGIPE 441
>YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon Tn4556| Length = 348 Score = 32.0 bits (71), Expect = 1.6 Identities = 32/119 (26%), Positives = 46/119 (38%) Frame = -3 Query: 562 TPGGSERSHFKIPPPPVRDVKAHLLSRDAAKKIKARTHMFHKPPLPSPVRGGSASPRNLS 383 +PGG+ + K P P L +R +A + T P P P ++SP+ + Sbjct: 200 SPGGTVQP--KSPAP--------LAARCSASRAGCPTAAGSLLPAPRPPASSASSPQAAA 249 Query: 382 PAAQKFVRNAIAKSTQTIDESLRASYRGSTPSAGTPKTRFSTDPGLGSRSPSARKGSTP 206 PAA R R +TPSA P +R + P +R P R TP Sbjct: 250 PAAPSATRLP----------------RRTTPSAPRPSSRPARPPIPAARPPPRRTPGTP 292
>TGIF_HUMAN (Q15583) 5'-TG-3'-interacting factor (Homeobox protein TGIF)| Length = 401 Score = 32.0 bits (71), Expect = 1.6 Identities = 30/100 (30%), Positives = 39/100 (39%), Gaps = 1/100 (1%) Frame = -3 Query: 562 TPGGSERSHFKIPPPPVRDVKAHLLSRDAAKKI-KARTHMFHKPPLPSPVRGGSASPRNL 386 TP S PPPP R + LS++ K R H + P PS G A R L Sbjct: 70 TPSALLGSSCAPPPPPARCPQPRALSQELGTKAGPRRPHRWELPRSPSQGAQGPAPRRRL 129 Query: 385 SPAAQKFVRNAIAKSTQTIDESLRASYRGSTPSAGTPKTR 266 + V A ++T DE + SAG+ K R Sbjct: 130 LETMKGIV---AASGSETEDEDSMDIPLDLSSSAGSGKRR 166
>ROBO3_HUMAN (Q96MS0) Roundabout homolog 3 precursor (Roundabout-like protein 3)| Length = 1386 Score = 32.0 bits (71), Expect = 1.6 Identities = 43/166 (25%), Positives = 62/166 (37%), Gaps = 21/166 (12%) Frame = -3 Query: 649 PSPAPG-ADESPFMTW-GDIDXTP--------LRLDPDETPGGSERSHFKIPPPPVRDVK 500 PSPAP A +P TW G+ + TP R P P E S +PPPP+ + Sbjct: 1217 PSPAPSTASSAPGRTWQGNGEMTPPLQGPRARFRKKPKALPYRRENSPGDLPPPPLPPPE 1276 Query: 499 ------AHLLSRDAAKKIKARTHMFHKPPLPSPVRGGSASPRNLSPAAQKFVRNAIAKST 338 L + + ++ K P+ A+ R L P + ++ + Sbjct: 1277 EEASWALELRAAGSMSSLERERSGERKAVQAVPL----AAQRVLHPDEEAWLPYSRPSFL 1332 Query: 337 QTIDESLRASYRGSTPSAGTPKTRFSTDPGLG-----SRSPSARKG 215 + S GS S G+ +R S PG SRS S R G Sbjct: 1333 SRGQGTSTCSTAGSNSSRGSSSSRGSRGPGRSRSRSQSRSQSQRPG 1378
>SHC3_RAT (O70143) SHC transforming protein 3 (SH2 domain protein C3) (Src| homology 2 domain-containing transforming protein C3) (Neuronal Shc) (N-Shc) Length = 594 Score = 31.6 bits (70), Expect = 2.1 Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 5/114 (4%) Frame = -3 Query: 622 SPFMTWGDIDXTPLRLDPDETPGG-----SERSHFKIPPPPVRDVKAHLLSRDAAKKIKA 458 SP++ G+ LR PD+ PG + SH K+ +R LS A ++ A Sbjct: 41 SPYLVSGEA----LRKAPDDGPGSLGHLLHKVSHLKLSSSGLRG-----LSSAARERAGA 91 Query: 457 RTHMFHKPPLPSPVRGGSASPRNLSPAAQKFVRNAIAKSTQTIDESLRASYRGS 296 R P + GGSA+P + +PAA + + ++ DE L RG+ Sbjct: 92 RLSGSCSAPSLAAPDGGSATPGSRAPAASM----SATRKSRASDEPLPRPPRGA 141
>IF2_CORGL (Q8NP40) Translation initiation factor IF-2| Length = 1004 Score = 31.6 bits (70), Expect = 2.1 Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 6/115 (5%) Frame = -3 Query: 529 IPPPPVRDVKAHLLSRDAAKKIKARTHMFHKPPLPSPVRGGSASPRNLSPAAQKFVRNAI 350 I PP V+ ++ H S + K A KP P P SA+P+ P A Sbjct: 39 IEPPVVKRMQEHYGSSGSDKSDTAAKPAAAKPAAPKP--AASAAPK---PGAPAKPAAPA 93 Query: 349 AKSTQTIDESLRASYRGSTPSAGT-PKTRFSTDPGLGSR-----SPSARKGSTPP 203 AK + A+ G+ P G K + PG ++ +PSA K + P Sbjct: 94 AKPAPAAPSAASAAKPGAAPKPGVQAKPAAAAKPGAPAKPAAPAAPSAAKSGSAP 148
>UNC4_DROME (O77215) Homeobox protein unc-4 (Paired-like homeodomain protein| unc-4) (DPHD-1) Length = 428 Score = 31.6 bits (70), Expect = 2.1 Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 3/66 (4%) Frame = -3 Query: 406 SASPRNLSPAAQKFVRNAIAKSTQTIDESLRASYRGSTPSAGTPKTRFSTD---PGLGSR 236 +A+ RN+S AAQ A+A + TI L R S P AG P + D PG G Sbjct: 18 AAALRNVS-AAQTTAVAAVASTVATIQHRLMIGNRQSLPPAGPPSEGSNEDGGFPGDGDD 76 Query: 235 SPSARK 218 SA K Sbjct: 77 DSSAAK 82
>CTND2_HUMAN (Q9UQB3) Catenin delta-2 (Delta-catenin) (Neural| plakophilin-related ARM-repeat protein) (NPRAP) (Neurojungin) (GT24) Length = 1225 Score = 31.6 bits (70), Expect = 2.1 Identities = 30/86 (34%), Positives = 37/86 (43%), Gaps = 7/86 (8%) Frame = -3 Query: 526 PPPPVRDVKAHLLSR-----DAAKKIKARTHMFHKPPLPSPVRGGS--ASPRNLSPAAQK 368 PPPP R+ A L DA A + LP+P RGGS A+P+ SP K Sbjct: 222 PPPPPREPFAPSLGSAFHLPDAPPAAAAAALYYSSSTLPAPPRGGSPLAAPQGGSPT--K 279 Query: 367 FVRNAIAKSTQTIDESLRASYRGSTP 290 R A T A+ RGS+P Sbjct: 280 LQRGGSAPEGATY-----AAPRGSSP 300
>CYTSA_FUGRU (Q2KN94) Cytospin-A| Length = 1118 Score = 31.6 bits (70), Expect = 2.1 Identities = 45/156 (28%), Positives = 64/156 (41%), Gaps = 16/156 (10%) Frame = -3 Query: 643 PAPGADESPFMTWGDIDXTPLRLDPDETPGGSERSHFKIPPPPVRDVKAHLL--SRDAAK 470 P+ GA +P ++ + TPL P +TP P V ++ H + S AAK Sbjct: 845 PSNGASVTPTVSAAPLPRTPLSPSPMKTP----------PAAAVSPIQRHSISGSMSAAK 894 Query: 469 KI-----KARTHMFHKPPLPSPVRGGSASPRNLSPAAQKFVRNAIAKSTQTIDESLRAS- 308 + K T+ P +RG +AS P+A + V N ST+TI S R+S Sbjct: 895 PLSSLGDKRPTYTDITIPTEHLLRGSAAS---RPPSALQRVSN--MDSTKTISVSRRSSE 949 Query: 307 --YRGSTPSAGTPKTRF------STDPGLGSRSPSA 224 R + S G T S L S SP+A Sbjct: 950 EMKRDMSASEGASSTSLMAMSAASAPLSLSSSSPTA 985
>TGIF_PANTR (Q5IS58) 5'-TG-3'-interacting factor (Homeobox protein TGIF)| Length = 401 Score = 31.2 bits (69), Expect = 2.8 Identities = 30/100 (30%), Positives = 38/100 (38%), Gaps = 1/100 (1%) Frame = -3 Query: 562 TPGGSERSHFKIPPPPVRDVKAHLLSRDAAKKI-KARTHMFHKPPLPSPVRGGSASPRNL 386 TP S PPPP R + LS + K R H + P PS G A R L Sbjct: 70 TPSALLGSSCAPPPPPARCPQPRALSPELGTKAGPRRPHRWELPRSPSQGAQGPAPRRRL 129 Query: 385 SPAAQKFVRNAIAKSTQTIDESLRASYRGSTPSAGTPKTR 266 + V A ++T DE + SAG+ K R Sbjct: 130 METMKGIV---AASGSETEDEDSMDIPLDLSSSAGSGKRR 166
>BCSC1_ACEXY (P19450) Cellulose synthase operon protein C precursor| Length = 1319 Score = 31.2 bits (69), Expect = 2.8 Identities = 24/76 (31%), Positives = 32/76 (42%) Frame = -3 Query: 442 HKPPLPSPVRGGSASPRNLSPAAQKFVRNAIAKSTQTIDESLRASYRGSTPSAGTPKTRF 263 H+ L +PV GGS S SP + ++IA +T+ E+L Sbjct: 869 HQTELGAPVTGGSYSAEAASPDTSDQMLSSIAGQIRTLRENLAP---------------- 912 Query: 262 STDPGLGSRSPSARKG 215 S D GLG RS S G Sbjct: 913 SIDGGLGFRSRSGEHG 928
>FOXC1_HUMAN (Q12948) Forkhead box protein C1 (Forkhead-related protein FKHL7)| (Forkhead-related transcription factor 3) (FREAC-3) Length = 553 Score = 30.8 bits (68), Expect = 3.6 Identities = 34/125 (27%), Positives = 46/125 (36%), Gaps = 10/125 (8%) Frame = -3 Query: 547 ERSHFKIPPPPVRDVKAHLLSRDAAKKIKARTHMFHKPPLPSPVR-------GGS--ASP 395 +R H K PPPP R + P P PVR G+ + P Sbjct: 187 DRLHLKEPPPP---------GRQPPPAPPEQADGNAPGPQPPPVRIQDIKTENGTCPSPP 237 Query: 394 RNLSPAAQKFVRNAIA-KSTQTIDESLRASYRGSTPSAGTPKTRFSTDPGLGSRSPSARK 218 + LSPAA +A A ++ D S + GS+P P R + G S P Sbjct: 238 QPLSPAAALGSGSAAAVPKIESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPAP 297 Query: 217 GSTPP 203 + PP Sbjct: 298 SAPPP 302
>VHS_HHV11 (P10225) Virion host shutoff protein| Length = 489 Score = 30.8 bits (68), Expect = 3.6 Identities = 28/96 (29%), Positives = 37/96 (38%), Gaps = 20/96 (20%) Frame = -3 Query: 643 PAPGADESPFMTWGDI----------DXTPLRLDPDETPGG-----SERSHFKIPPPPVR 509 PA G E+ ++W +I D L LDP + GG S S PP V+ Sbjct: 310 PAAGGTETR-VSWTEILTQQIAGGYEDDEDLPLDPRDVTGGHPGPRSSSSEILTPPELVQ 368 Query: 508 DVKAHLLSRDAAKKIKARTHMFHKPP-----LPSPV 416 A LL + R H+ H P LP P+ Sbjct: 369 VPNAQLLEEHRSYVANPRRHVIHDAPESLDWLPDPM 404
>YM92_CAEEL (P34531) Hypothetical protein M01A8.2 in chromosome III| Length = 937 Score = 30.8 bits (68), Expect = 3.6 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%) Frame = -2 Query: 494 PAVQGRREEDK--GTNTYVSQATATIACERRQCKPQES 387 P Q R+ E+ T+ YVS +T IA +QC+P E+ Sbjct: 117 PLTQERKPEEDVMSTSVYVSSSTKPIAIPTKQCRPPET 154
>OAR1_LOCMI (Q25321) Tyramine receptor 1 (Tyr-Loc1)| Length = 484 Score = 30.4 bits (67), Expect = 4.8 Identities = 28/113 (24%), Positives = 44/113 (38%) Frame = -3 Query: 568 DETPGGSERSHFKIPPPPVRDVKAHLLSRDAAKKIKARTHMFHKPPLPSPVRGGSASPRN 389 D+ SE +H ++PPPP K R KK K + + +P S + Sbjct: 272 DQESVSSETNHNELPPPPAPPSKEK--RRKTKKKSKKKEQAAEEGRFLAPAMVAEDSVTD 329 Query: 388 LSPAAQKFVRNAIAKSTQTIDESLRASYRGSTPSAGTPKTRFSTDPGLGSRSP 230 S + RN +A+ T + + +T +A T R T GS +P Sbjct: 330 NSVSVGPVARNHLAEDGYTCTTTTTTT---TTTTAVTDSPRSRTASQKGSTAP 379
>SYH_STAES (Q8CS98) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 424 Score = 30.4 bits (67), Expect = 4.8 Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Frame = -2 Query: 365 CEECYRKIHTNH**VSPCKLQRVDAICRHPKDKVFN*PRLGITVSFGEKRFHPSMVI-LV 189 C +C ++HTN + CK+ R K+ V N PR+ ++ K ++ + + L Sbjct: 191 CSDCQSRLHTNPMRILDCKIDR-------DKEAVKNAPRITDYLNNDSKSYYEQVKLHLD 243 Query: 188 NPNVIYIQ 165 N N+ Y++ Sbjct: 244 NLNISYVE 251
>SYH_STAEQ (Q5HNS1) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 424 Score = 30.4 bits (67), Expect = 4.8 Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Frame = -2 Query: 365 CEECYRKIHTNH**VSPCKLQRVDAICRHPKDKVFN*PRLGITVSFGEKRFHPSMVI-LV 189 C +C ++HTN + CK+ R K+ V N PR+ ++ K ++ + + L Sbjct: 191 CSDCQSRLHTNPMRILDCKIDR-------DKEAVKNAPRITDYLNNDSKSYYEQVKLHLD 243 Query: 188 NPNVIYIQ 165 N N+ Y++ Sbjct: 244 NLNISYVE 251
>RL4_THEAC (Q9HIR0) 50S ribosomal protein L4P| Length = 255 Score = 30.4 bits (67), Expect = 4.8 Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Frame = -3 Query: 352 IAKSTQTIDESLRASYRGSTPSAGTPKTRFSTDPGLG-SRSPSARKGS 212 I ++ + I S+R Y GS+P AG + +T PGLG SR P GS Sbjct: 33 IRRAFRAISLSMRQPY-GSSPLAGMRRVGHTTRPGLGISRMPRIAGGS 79
>CLAT_HUMAN (P28329) Choline O-acetyltransferase (EC 2.3.1.6) (CHOACTase)| (Choline acetylase) (ChAT) Length = 748 Score = 30.4 bits (67), Expect = 4.8 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 7/77 (9%) Frame = -3 Query: 643 PAPGADESPFMTWGDIDXTPLRLDPDETPGGSERSHFKIPPPPVRDVKA-------HLLS 485 PAPG ++P + + P ++ +TP E K+P PP++ A HL+S Sbjct: 102 PAPGLTKTPIL-----EKVPRKMAA-KTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVS 155 Query: 484 RDAAKKIKARTHMFHKP 434 + +K +A F P Sbjct: 156 EEQFRKSQAIVQQFGAP 172
>CWC25_YARLI (Q6C1V6) Pre-mRNA-splicing factor CWC25| Length = 561 Score = 30.4 bits (67), Expect = 4.8 Identities = 21/51 (41%), Positives = 28/51 (54%) Frame = -3 Query: 358 NAIAKSTQTIDESLRASYRGSTPSAGTPKTRFSTDPGLGSRSPSARKGSTP 206 NA+ K Q + L AS + +T S GT +T S G R+PSA GS+P Sbjct: 439 NALPKGLQQMRAKLLASKKTTTVS-GTSQTPTSAPSG-SQRTPSAASGSSP 487
>BCSC2_ACEXY (O82861) Cellulose synthase operon protein C precursor| Length = 1326 Score = 30.4 bits (67), Expect = 4.8 Identities = 24/76 (31%), Positives = 31/76 (40%) Frame = -3 Query: 442 HKPPLPSPVRGGSASPRNLSPAAQKFVRNAIAKSTQTIDESLRASYRGSTPSAGTPKTRF 263 H+ L +PV GGS S SP + ++IA T+ E+L Sbjct: 869 HQVELGAPVTGGSYSAEAASPDTSDQMLSSIAGQIHTLRENLAP---------------- 912 Query: 262 STDPGLGSRSPSARKG 215 S D GLG RS S G Sbjct: 913 SIDGGLGFRSRSGEHG 928
>TMPSD_MOUSE (Q5U405) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic| serine protease) (Membrane-type mosaic serine protease) Length = 543 Score = 30.0 bits (66), Expect = 6.2 Identities = 26/107 (24%), Positives = 38/107 (35%) Frame = -3 Query: 595 DXTPLRLDPDETPGGSERSHFKIPPPPVRDVKAHLLSRDAAKKIKARTHMFHKPPLPSPV 416 + +P R P +P + + P R +R + AR PP SP Sbjct: 8 NSSPARTPPQASPARTSPARAPPQASPARTPPQASPARTPPQASPARA----PPPQASPA 63 Query: 415 RGGSASPRNLSPAAQKFVRNAIAKSTQTIDESLRASYRGSTPSAGTP 275 R ASP P+ R++ A+S T R +TP P Sbjct: 64 R---ASPARAPPSRSSSGRSSSARSASTTSSPTRVYLVRATPVGAVP 107
>GRB7_MOUSE (Q03160) Growth factor receptor-bound protein 7 (GRB7 adapter| protein) (Epidermal growth factor receptor GRB-7) Length = 535 Score = 30.0 bits (66), Expect = 6.2 Identities = 17/64 (26%), Positives = 24/64 (37%) Frame = -3 Query: 571 PDETPGGSERSHFKIPPPPVRDVKAHLLSRDAAKKIKARTHMFHKPPLPSPVRGGSASPR 392 PD P G + +P P R ++ + I PP P+ GGS+ R Sbjct: 31 PDNPPPGDVKRSQPLPIPSSRKLREEEFQATSLPSIPNPFPELCSPPSQKPILGGSSGAR 90 Query: 391 NLSP 380 L P Sbjct: 91 GLLP 94
>VL96_IRV1 (P22856) L96 protein| Length = 867 Score = 30.0 bits (66), Expect = 6.2 Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Frame = -3 Query: 427 PSPVRGGSASPRNLSPAAQKFVRNAIAKSTQTIDESLRASYRGSTPSA--GTPKTR-FST 257 PS + SA PR+ SP+ + A+ T E+ +S R +PS +P R S Sbjct: 443 PSVPKSPSARPRSKSPSVR-------AEITDDEGETPPSSVRPKSPSVRPKSPSVRPRSK 495 Query: 256 DPGLGSRSPSARKGSTPP 203 P + +SPSAR S P Sbjct: 496 SPSVRPKSPSARPRSKSP 513
>ATX2L_HUMAN (Q8WWM7) Ataxin-2-like protein (Ataxin-2 domain protein)| (Ataxin-2-related protein) Length = 1075 Score = 30.0 bits (66), Expect = 6.2 Identities = 33/118 (27%), Positives = 45/118 (38%), Gaps = 35/118 (29%) Frame = -3 Query: 451 HMFHKPPLP-SPVRGGSASPRNLSPAAQKFVRNAIAKSTQT------------------- 332 H+ + P P S RG + P +SP AQ+ +R A S+ + Sbjct: 386 HLDNSSPGPGSEARGINGGPSRMSPKAQRPLRGAKTLSSPSNRPSGETSVPPPPAVGRMY 445 Query: 331 ------------IDESLRASYRGS---TPSAGTPKTRFSTDPGLGSRSPSARKGSTPP 203 I S GS T SA P T +DPG+GS SP++ K S P Sbjct: 446 PPRSPKSAAPAPISASCPEPPIGSAVPTSSASIPVTSSVSDPGVGSISPASPKISLAP 503
>ZBTB3_MOUSE (Q91X45) Zinc finger and BTB domain-containing protein 3| Length = 518 Score = 30.0 bits (66), Expect = 6.2 Identities = 19/49 (38%), Positives = 22/49 (44%) Frame = -3 Query: 631 ADESPFMTWGDIDXTPLRLDPDETPGGSERSHFKIPPPPVRDVKAHLLS 485 ADE P G D T ++ D SH + PPPPV DV L S Sbjct: 182 ADEPPVS--GGADTTQPSMEVDS-------SHLRAPPPPVADVSVSLAS 221
>PDLI7_CHICK (Q679P3) PDZ and LIM domain protein 7 (LIM mineralization protein)| Length = 416 Score = 30.0 bits (66), Expect = 6.2 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%) Frame = -3 Query: 280 TPKTRFSTDPGLGSRSPSARKGST--PPW 200 +P T+PGL R+P+A G T PPW Sbjct: 159 SPGAAMKTEPGLAPRTPAATPGPTSRPPW 187
>CHD1_HUMAN (O14646) Chromodomain-helicase-DNA-binding protein 1 (EC 3.6.1.-)| (ATP-dependent helicase CHD1) (CHD-1) Length = 1709 Score = 29.6 bits (65), Expect = 8.1 Identities = 17/54 (31%), Positives = 28/54 (51%) Frame = -3 Query: 373 QKFVRNAIAKSTQTIDESLRASYRGSTPSAGTPKTRFSTDPGLGSRSPSARKGS 212 ++ VRN+ +S+Q+ D+S AS GS S+G+ S+ G + GS Sbjct: 7 EESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGS 60
>JPH4_MOUSE (Q80WT0) Junctophilin-4 (Junctophilin-like 1 protein)| Length = 628 Score = 29.6 bits (65), Expect = 8.1 Identities = 23/76 (30%), Positives = 30/76 (39%) Frame = -3 Query: 430 LPSPVRGGSASPRNLSPAAQKFVRNAIAKSTQTIDESLRASYRGSTPSAGTPKTRFSTDP 251 L P AS R +PAA F R ++ S LRA R S+ + R Sbjct: 197 LAGPGDADGASSRKRTPAAGGFFRRSLLLS------GLRAGGRRSSLGSKRGSLRSEVSS 250 Query: 250 GLGSRSPSARKGSTPP 203 +GS P + S PP Sbjct: 251 EVGSTGPPGSEASGPP 266
>JPH4_HUMAN (Q96JJ6) Junctophilin-4 (Junctophilin-like 1 protein)| Length = 628 Score = 29.6 bits (65), Expect = 8.1 Identities = 23/76 (30%), Positives = 30/76 (39%) Frame = -3 Query: 430 LPSPVRGGSASPRNLSPAAQKFVRNAIAKSTQTIDESLRASYRGSTPSAGTPKTRFSTDP 251 L P AS R +PAA F R ++ S LRA R S+ + R Sbjct: 197 LAGPGDADGASSRKRTPAAGGFFRRSLLLS------GLRAGGRRSSLGSKRGSLRSEVSS 250 Query: 250 GLGSRSPSARKGSTPP 203 +GS P + S PP Sbjct: 251 EVGSTGPPGSEASGPP 266
>IF2_RALEJ (Q46ZP1) Translation initiation factor IF-2| Length = 966 Score = 29.6 bits (65), Expect = 8.1 Identities = 27/106 (25%), Positives = 39/106 (36%) Frame = -3 Query: 517 PVRDVKAHLLSRDAAKKIKARTHMFHKPPLPSPVRGGSASPRNLSPAAQKFVRNAIAKST 338 P R +KA R A +K +T HKP P+ A + PAA +T Sbjct: 259 PARVLKAPS-ERKAEEKKAEQTGTLHKPVKPASATATEAKAGDKKPAA----------TT 307 Query: 337 QTIDESLRASYRGSTPSAGTPKTRFSTDPGLGSRSPSARKGSTPPW 200 T + A +G T G+ + S G G ++ G W Sbjct: 308 TTTTATTTADKKGKTGKPGSWQDDSSRKKGSGLKTRGDSSGGVGGW 353
>SOX11_MOUSE (Q04889) Transcription factor SOX-11| Length = 395 Score = 29.6 bits (65), Expect = 8.1 Identities = 16/48 (33%), Positives = 21/48 (43%) Frame = -3 Query: 601 DIDXTPLRLDPDETPGGSERSHFKIPPPPVRDVKAHLLSRDAAKKIKA 458 D D LR PD E +H + PPP + LL R + K+ A Sbjct: 196 DDDELQLRPKPDADDDDDEPAHSHLLPPPAQQQPPQLLRRYSVAKVPA 243
>YLPM1_HUMAN (P49750) YLP motif-containing protein 1 (Nuclear protein ZAP3)| (ZAP113) Length = 1951 Score = 29.6 bits (65), Expect = 8.1 Identities = 26/104 (25%), Positives = 41/104 (39%), Gaps = 5/104 (4%) Frame = -3 Query: 529 IPPPPV-RDVKAHLLSRDAAKKIKARTHMFHKPP----LPSPVRGGSASPRNLSPAAQKF 365 IPPP V + + L + +++ + P LP+PV GSA P P Sbjct: 438 IPPPGVPQGIPPQLTAAPVPPASSSQSSQVPEKPRPALLPTPVSFGSAPPTTYHP----- 492 Query: 364 VRNAIAKSTQTIDESLRASYRGSTPSAGTPKTRFSTDPGLGSRS 233 Q+ S + + + + P + FS+D GLG S Sbjct: 493 -------PLQSAGPSEQVNSKAPLSKSALPYSSFSSDQGLGESS 529
>IF2_DESPS (Q6AJY4) Translation initiation factor IF-2| Length = 939 Score = 29.6 bits (65), Expect = 8.1 Identities = 26/92 (28%), Positives = 34/92 (36%), Gaps = 2/92 (2%) Frame = -3 Query: 487 SRDAAKKIKARTHMFHKPPLPSPVRGGSASPRNLSPA--AQKFVRNAIAKSTQTIDESLR 314 SR K + + +P PSP R P+ +PA AQ RN K + + R Sbjct: 249 SRPRRKPTRPPVNRSPRPSTPSPNRSAGGPPKPAAPATPAQDDSRNRKKKGRRDEKPAER 308 Query: 313 ASYRGSTPSAGTPKTRFSTDPGLGSRSPSARK 218 S + G T F TD R P K Sbjct: 309 DSRPKAKGKKGVKFTHFGTDYQNRGRRPRRGK 340 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 106,066,834 Number of Sequences: 219361 Number of extensions: 2529892 Number of successful extensions: 7060 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 6535 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7039 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6143359464 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
