ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags31d10 |
|---|---|
| Clone Library Name | barley_pub |
>ILF3_RAT (Q9JIL3) Interleukin enhancer-binding factor 3| Length = 897 Score = 37.7 bits (86), Expect = 0.033 Identities = 19/50 (38%), Positives = 26/50 (52%) Frame = -3 Query: 549 GRSHVGYSSGRSVAGHDPVYSSSRHGLSYGGSASTGDAGGNYTSNYSADY 400 G GYSS + AG+ YS+ H YG + G GG +S+YS+ Y Sbjct: 672 GYGSYGYSSNSATAGYSQFYSNGGH---YGNAGGGGSGGGGGSSSYSSYY 718
>SRY_MOUSE (Q05738) Sex-determining region Y protein (Testis-determining| factor) Length = 395 Score = 36.6 bits (83), Expect = 0.074 Identities = 21/76 (27%), Positives = 29/76 (38%) Frame = +3 Query: 375 RQHQIHEACSLHCNLKCNFHQHLQYLQNLHNSSHGGCCCTPGHDQRQICRYCIPHETAQA 554 +QHQ H+ H K FH H Q Q H+ H HD Q + H + Sbjct: 277 QQHQFHD----HPQQKQQFHDHPQQQQQFHDHHHQQQQKQQFHDHHQQKQQFHDHHQQKQ 332 Query: 555 SQYKHLHTEHCYHQHH 602 + H + +H HH Sbjct: 333 QFHDHHQQQQQFHDHH 348
>ILF3_MOUSE (Q9Z1X4) Interleukin enhancer-binding factor 3| Length = 898 Score = 36.6 bits (83), Expect = 0.074 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Frame = -3 Query: 549 GRSHVGYSSGRSVAGHDPVYSSSRHGLSYGGSASTGDAG-GNYTSNYSAD 403 G GYSS + AG+ YS+ H + GG S G G +Y+S Y D Sbjct: 672 GYGSYGYSSNSATAGYSQFYSNGGHSGNAGGGGSGGGGGSSSYSSYYQGD 721
>AMY2_SCHPO (O42918) Probable alpha-amylase meu7 precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) (Meiotic expression up-regulated protein 7) Length = 774 Score = 35.4 bits (80), Expect = 0.17 Identities = 36/154 (23%), Positives = 53/154 (34%), Gaps = 13/154 (8%) Frame = +3 Query: 195 PHLPLVQIHRP*VKELHTIHGLHQSPMVPHLSSMN----WNHCHQSTHCCYPCYDPSNVM 362 PH H+P E H HG P +PH + W H H +P P N Sbjct: 270 PHNGTKPDHKPWKHEEHCHHGKFPRP-IPHNGTKPDHKPWKHEEHCHHGRFPRPVPHNGT 328 Query: 363 NMNSRQHQIHEACSLHCNLKCNFHQHLQYLQNL-HNSSHGGCCCTPGHDQRQICRYC--- 530 + + + E CS H H ++ + + HN + P H + +C Sbjct: 329 KPDHKPWKHEEHCSCH---------HDKFSRPVPHNGTK------PDHKPWKHEEHCHHG 373 Query: 531 -----IPHETAQASQYKHLHTEHCYHQHHNLSVP 617 +PH + H EHC+H VP Sbjct: 374 KFLRPVPHNVTKPDHKPWKHEEHCHHGKFPRPVP 407
>DBP2_USTMA (Q4PHU9) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 552 Score = 35.0 bits (79), Expect = 0.22 Identities = 20/50 (40%), Positives = 23/50 (46%) Frame = -3 Query: 549 GRSHVGYSSGRSVAGHDPVYSSSRHGLSYGGSASTGDAGGNYTSNYSADY 400 G GY G S G+ SS G SYGG +S G+ GG Y Y Y Sbjct: 17 GGGRGGYGGGSSSYGNGG--SSYGGGSSYGGGSSYGNGGGGYGGGYGGGY 64
>K1C10_HUMAN (P13645) Keratin, type I cytoskeletal 10 (Cytokeratin-10) (CK-10)| (Keratin-10) (K10) Length = 593 Score = 34.7 bits (78), Expect = 0.28 Identities = 24/59 (40%), Positives = 26/59 (44%), Gaps = 4/59 (6%) Frame = -3 Query: 594 GGSSARYADAYTERLGRSHVGYSSGRSVAGHDPVYSSSRHGLS----YGGSASTGDAGG 430 GGSS + G S GY G S GH SS HG S YGG +S G GG Sbjct: 492 GGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGGSSSGGHGGSSSGGYGGGSSGGGGGG 550
>RBP56_HUMAN (Q92804) TATA-binding protein-associated factor 2N (RNA-binding| protein 56) (TAFII68) (TAF(II)68) Length = 592 Score = 33.5 bits (75), Expect = 0.63 Identities = 20/48 (41%), Positives = 21/48 (43%) Frame = -3 Query: 546 RSHVGYSSGRSVAGHDPVYSSSRHGLSYGGSASTGDAGGNYTSNYSAD 403 RS GY RS G YS R G YGG S G GG+ Y D Sbjct: 422 RSGGGYGGDRSSGGG---YSGDRSGGGYGGDRSGGGYGGDRGGGYGGD 466
>K2C1_MOUSE (P04104) Keratin, type II cytoskeletal 1 (Cytokeratin-1) (CK-1)| (Keratin-1) (K1) (67 kDa cytokeratin) Length = 627 Score = 33.5 bits (75), Expect = 0.63 Identities = 19/54 (35%), Positives = 25/54 (46%) Frame = -3 Query: 585 SARYADAYTERLGRSHVGYSSGRSVAGHDPVYSSSRHGLSYGGSASTGDAGGNY 424 S + ++T G S G SG G Y G SYGGS+ G +GG+Y Sbjct: 509 SVSVSTSHTSMSGSSSRGGGSGGGRYGGGGSYGGGSGGGSYGGSSGGGGSGGSY 562
>HORN_HUMAN (Q86YZ3) Hornerin| Length = 2850 Score = 33.1 bits (74), Expect = 0.82 Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 2/67 (2%) Frame = -3 Query: 603 YDVGGSSARYADAYTERLGRSHVGYSSGRSVAGHDPVYSSSRHGLSYGGSASTGD--AGG 430 +D GSS + +Y R S GR AG S RHG G S+S G +G Sbjct: 2733 FDQEGSSTGQSSSYGHRGSGSSQSSGYGRHGAGSGQSLSHGRHGSGSGQSSSYGQHGSGS 2792 Query: 429 NYTSNYS 409 +S YS Sbjct: 2793 GQSSGYS 2799 Score = 32.7 bits (73), Expect = 1.1 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 2/66 (3%) Frame = -3 Query: 591 GSSARYADAYTERLGRSHVGYSSGR--SVAGHDPVYSSSRHGLSYGGSASTGDAGGNYTS 418 GSS+ + +Y + SH GR S +GH P S RHG S G S+S G G + Sbjct: 743 GSSSGLSSSYGQHGSGSHQSSGHGRQGSGSGHSP--SRVRHGSSSGHSSSHGQHGSGTSC 800 Query: 417 NYSADY 400 + S + Sbjct: 801 SSSCGH 806 Score = 30.4 bits (67), Expect = 5.3 Identities = 20/57 (35%), Positives = 24/57 (42%) Frame = -3 Query: 603 YDVGGSSARYADAYTERLGRSHVGYSSGRSVAGHDPVYSSSRHGLSYGGSASTGDAG 433 +D GSS + +Y R S GR AG S RHG G S+S G G Sbjct: 1323 FDQEGSSTGQSSSYGHRGSGSSQSSGYGRHGAGSGQSPSRGRHGSGSGHSSSYGQHG 1379 Score = 30.0 bits (66), Expect = 6.9 Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Frame = -3 Query: 591 GSSARYADAYTERLGRSHVGYSSGRSVAGHDPVYSSSRHGLSYGGSASTGDAG-GNYTSN 415 GSS+R + Y + S GR +G S RHG G S+S G G G+ S+ Sbjct: 1680 GSSSRSSSRYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGRSS 1739 Query: 414 YSADYMPR 391 Y R Sbjct: 1740 SRGPYESR 1747
>DED1_YARLI (Q6CB69) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 618 Score = 33.1 bits (74), Expect = 0.82 Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 11/65 (16%) Frame = -3 Query: 588 SSARYADAYTERLGRSHVGYSSGRSVA-----------GHDPVYSSSRHGLSYGGSASTG 442 S+AR A GR G+ GRS A G + + S G SYGG +S G Sbjct: 550 STAREASYGGRGGGRGRGGFGGGRSRATQDFRKQGGGFGSNDRFGGSSGGSSYGGGSSYG 609 Query: 441 DAGGN 427 + GGN Sbjct: 610 NQGGN 614
>DBP2_ASPOR (Q2U070) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 554 Score = 32.7 bits (73), Expect = 1.1 Identities = 22/62 (35%), Positives = 29/62 (46%) Frame = -3 Query: 591 GSSARYADAYTERLGRSHVGYSSGRSVAGHDPVYSSSRHGLSYGGSASTGDAGGNYTSNY 412 G Y++ Y+ G S+ GYS G S G+ Y +G YGG G GG+ SN Sbjct: 18 GGGGGYSNGYSN--GNSN-GYSGGGSGGGYGGGYGGGGYGGGYGGRGG-GAGGGDRMSNL 73 Query: 411 SA 406 A Sbjct: 74 GA 75
>NBEA_DROME (Q9W4E2) Protein neurobeachin (Protein rugose) (A-kinase anchor| protein 550) (AKAP 550) (dAKAP550) Length = 3584 Score = 32.7 bits (73), Expect = 1.1 Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 1/94 (1%) Frame = +3 Query: 315 QSTHCCYPCYDPSNVMNMNSR-QHQIHEACSLHCNLKCNFHQHLQYLQNLHNSSHGGCCC 491 Q +H YP + P + N NS QHQ + + +++Q Q Q +HN SH Sbjct: 1988 QWSHHVYPQFLPESHQNHNSNMQHQQQQQQQQQHQQQQHYYQQQQQQQVVHNHSHHH--M 2045 Query: 492 TPGHDQRQICRYCIPHETAQASQYKHLHTEHCYH 593 T + Q+Q H+ A Q +H T H Sbjct: 2046 TAAYYQQQ------QHQQVAAGQQQHSPTPLATH 2073
>PCD15_HUMAN (Q96QU1) Protocadherin-15 precursor| Length = 1955 Score = 32.3 bits (72), Expect = 1.4 Identities = 22/55 (40%), Positives = 26/55 (47%) Frame = +2 Query: 431 PPASPVLAEPP*LKPWRLLLYTGS*PATDLPLLYPT*DRPSLSV*ASAYRALLPP 595 PPA LA PP + P+ L S P+ LPL PT S+S LLPP Sbjct: 1759 PPAPAPLAPPPDISPFSLFCPPPSPPSIPLPLPPPTFFPLSVSTSGPPTPPLLPP 1813
>RO21_XENLA (P51989) Heterogeneous nuclear ribonucleoprotein A2 homolog 1| (hnRNP A2(A)) Length = 346 Score = 32.0 bits (71), Expect = 1.8 Identities = 22/66 (33%), Positives = 26/66 (39%), Gaps = 5/66 (7%) Frame = -3 Query: 594 GGSSARYADAYTERLGRSHVGYSS-----GRSVAGHDPVYSSSRHGLSYGGSASTGDAGG 430 GG+ +D Y G GY+ G G P Y R G YGG A G+ GG Sbjct: 211 GGNFRGGSDGYGGGRGYGDNGYNGYGGGQGGGNYGGGPSYGGGRGG-GYGGGAGYGNQGG 269 Query: 429 NYTSNY 412 Y Y Sbjct: 270 GYGGGY 275
>RBY1A_HUMAN (Q15414) RNA-binding motif protein, Y chromosome, family 1 member| A1 (RNA-binding motif protein 1) Length = 496 Score = 31.6 bits (70), Expect = 2.4 Identities = 30/101 (29%), Positives = 40/101 (39%), Gaps = 13/101 (12%) Frame = -3 Query: 669 EMDDVPPRYHDISVRQPKARLDYDVGGSSARYADAYTERLGRSHVGYSSGRSVAGHDPVY 490 E D P + D + R + Y D Y E LGR H + SG S Y Sbjct: 338 ETRDYAPPHRDYAYRDYGHSSWDEHSSRGYSYHDGYGEALGRDHSEHLSGSSYRDALQRY 397 Query: 489 SSSRHG--------LSYGGS-----ASTGDAGGNYTSNYSA 406 +S HG +SYGGS ++T D G +YS+ Sbjct: 398 GTS-HGAPPARGPRMSYGGSTCHAYSNTRDRYGRSWESYSS 437
>LEPR_HUMAN (P48357) Leptin receptor precursor (LEP-R) (OB receptor) (OB-R)| (HuB219) (CD295 antigen) Length = 1165 Score = 31.6 bits (70), Expect = 2.4 Identities = 14/38 (36%), Positives = 17/38 (44%) Frame = +3 Query: 258 LHQSPMVPHLSSMNWNHCHQSTHCCYPCYDPSNVMNMN 371 L SP+VP S HC+ S H C C P +N Sbjct: 169 LEDSPLVPQKGSFQMVHCNCSVHECCECLVPVPTAKLN 206
>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor| Length = 351 Score = 31.6 bits (70), Expect = 2.4 Identities = 25/121 (20%), Positives = 41/121 (33%) Frame = +3 Query: 243 HTIHGLHQSPMVPHLSSMNWNHCHQSTHCCYPCYDPSNVMNMNSRQHQIHEACSLHCNLK 422 H HG H H + + +H H + H + +D + H H H + Sbjct: 239 HHHHGHHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHH-------HHHHHHDAHHHHHHH 291 Query: 423 CNFHQHLQYLQNLHNSSHGGCCCTPGHDQRQICRYCIPHETAQASQYKHLHTEHCYHQHH 602 + H H + + H+ H H + H A + H H H +H HH Sbjct: 292 HDAHHHHHHHHDAHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHH-HDAHHHHHHH 350 Query: 603 N 605 + Sbjct: 351 H 351 Score = 30.8 bits (68), Expect = 4.1 Identities = 32/143 (22%), Positives = 47/143 (32%), Gaps = 6/143 (4%) Frame = +3 Query: 195 PHLPLVQIHRP*VKELHTIHGLHQSPMVPHLSSMNWNHCHQSTHCCYPCYDPSNVMNMNS 374 PH H P H H H P PH + H H H + + + + ++ Sbjct: 88 PHHEEHHHHHP-----HPHHHHHHHP--PH-HHHHLGHHHHHHHAAHHHHHEEHHHHHHA 139 Query: 375 RQHQIHEACSLHCNLKCNF----HQHLQYLQNL--HNSSHGGCCCTPGHDQRQICRYCIP 536 H HE H + + H HL Y + H+ H H + Sbjct: 140 AHHHHHEEHHHHHHAAHHHPWFHHHHLGYHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHH 199 Query: 537 HETAQASQYKHLHTEHCYHQHHN 605 H A + H H H +H HH+ Sbjct: 200 HHHAPHHHHHHHHAPHHHHHHHH 222 Score = 30.0 bits (66), Expect = 6.9 Identities = 23/121 (19%), Positives = 39/121 (32%) Frame = +3 Query: 243 HTIHGLHQSPMVPHLSSMNWNHCHQSTHCCYPCYDPSNVMNMNSRQHQIHEACSLHCNLK 422 H H H PH + + H H + + + + + H H H + Sbjct: 202 HAPHHHHHHHHAPHHHHHHHHGHHHHHHHHHGHHHHHHHHHGHHHHHHHHHDAHHHHHHH 261 Query: 423 CNFHQHLQYLQNLHNSSHGGCCCTPGHDQRQICRYCIPHETAQASQYKHLHTEHCYHQHH 602 + H H + + H+ H H + H A + H H H +H HH Sbjct: 262 HDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHH-HHHHHDAHHHHHHHDAHHHHHHH 320 Query: 603 N 605 + Sbjct: 321 H 321
>ILF3_HUMAN (Q12906) Interleukin enhancer-binding factor 3 (Nuclear factor of| activated T-cells 90 kDa) (NF-AT-90) (Double-stranded RNA-binding protein 76) (DRBP76) (Translational control protein 80) (TCP80) (Nuclear factor associated with dsRNA) (NFAR) ( Length = 894 Score = 31.2 bits (69), Expect = 3.1 Identities = 18/65 (27%), Positives = 23/65 (35%), Gaps = 1/65 (1%) Frame = -3 Query: 594 GGSSARYADAYTERLGRSHVGYSSGRSVAGHDPVYSSSRH-GLSYGGSASTGDAGGNYTS 418 G A + G GY + AG+ YS+ H G + GG G Y S Sbjct: 656 GFGGANHGGYMNAGAGYGSYGYGGNSATAGYSQFYSNGGHSGNASGGGGGGGGGSSGYGS 715 Query: 417 NYSAD 403 Y D Sbjct: 716 YYQGD 720 Score = 30.4 bits (67), Expect = 5.3 Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 2/65 (3%) Frame = -3 Query: 594 GGSSARYADA--YTERLGRSHVGYSSGRSVAGHDPVYSSSRHGLSYGGSASTGDAGGNYT 421 GGS Y Y+ GRS G S G A ++P G S GGS+ G GG Sbjct: 797 GGSDYNYESKFNYSGSGGRSG-GNSYGSGGASYNPGSHGGYGGGSGGGSSYQGKQGGYSQ 855 Query: 420 SNYSA 406 SNY++ Sbjct: 856 SNYNS 860
>COFH_HALSA (Q9HNU8) FO synthase subunit 2 (EC 2.5.1.-)| (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 2) Length = 500 Score = 31.2 bits (69), Expect = 3.1 Identities = 21/86 (24%), Positives = 36/86 (41%) Frame = +3 Query: 345 DPSNVMNMNSRQHQIHEACSLHCNLKCNFHQHLQYLQNLHNSSHGGCCCTPGHDQRQICR 524 D + V N+N+ + AC+ C L CNF + H ++HGG TP + + Sbjct: 120 DVTFVANLNNN---VTTACNTGC-LFCNFKDTAHRFETEHEAAHGGFTKTPAESKATVAD 175 Query: 525 YCIPHETAQASQYKHLHTEHCYHQHH 602 I ++ + LH ++ H Sbjct: 176 -AIQRGVSEVTSVSGLHPAFGLNEAH 200
>CSW_DROVI (Q24708) Tyrosine-protein phosphatase corkscrew (EC 3.1.3.48)| (Fragment) Length = 764 Score = 30.8 bits (68), Expect = 4.1 Identities = 17/39 (43%), Positives = 23/39 (58%) Frame = -3 Query: 543 SHVGYSSGRSVAGHDPVYSSSRHGLSYGGSASTGDAGGN 427 S+ SS S A H+ V SSS + S GSA++ +A GN Sbjct: 623 SYCNSSSSTSTAQHNGVVSSSNNCSSGSGSANSSNANGN 661
>PCSK9_RAT (P59996) Proprotein convertase subtilisin/kexin type 9 precursor| (EC 3.4.21.-) (Proprotein convertase PC9) (Subtilisin/kexin-like protease PC9) (Neural apoptosis-regulated convertase 1) (NARC-1) Length = 691 Score = 30.8 bits (68), Expect = 4.1 Identities = 20/65 (30%), Positives = 25/65 (38%) Frame = +3 Query: 306 HCHQSTHCCYPCYDPSNVMNMNSRQHQIHEACSLHCNLKCNFHQHLQYLQNLHNSSHGGC 485 HCHQ H C V N+ ++Q + S H +C HQ S H C Sbjct: 550 HCHQKDHVLTGCSFHWEVENLRAQQQPLLR--SRHQPGQCVGHQEA--------SVHASC 599 Query: 486 CCTPG 500 C PG Sbjct: 600 CHAPG 604
>EGG3_SCHMA (P13396) Eggshell protein precursor (Chorion protein)| Length = 177 Score = 30.8 bits (68), Expect = 4.1 Identities = 21/55 (38%), Positives = 23/55 (41%) Frame = -3 Query: 576 YADAYTERLGRSHVGYSSGRSVAGHDPVYSSSRHGLSYGGSASTGDAGGNYTSNY 412 YA AYT S GY G + D Y S YGG + GD GG Y Y Sbjct: 15 YATAYTTSHDYSG-GYGGGCYGSDCDSGYGDS----GYGGGCTGGDCGGGYGGGY 64
>HORN_MOUSE (Q8VHD8) Hornerin| Length = 2496 Score = 30.8 bits (68), Expect = 4.1 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Frame = -3 Query: 594 GGSSARYADAYTERLGRSHVGYSSGRSVAGHDPVYSSS--RHGLSYGGSASTGDAGGN 427 G S+R A + + S G SS S G YSS +HG S GGSA +G N Sbjct: 192 GRPSSRKASGFPQP--GSEQGQSSSSSTKGSGECYSSGNGKHGSSSGGSAVSGSGHSN 247
>ZNT1_RAT (Q62720) Zinc transporter 1 (ZnT-1) (Solute carrier family 30| member 1) Length = 507 Score = 30.8 bits (68), Expect = 4.1 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 3/37 (8%) Frame = +3 Query: 297 NWNHCHQSTHCCYPCY-DP--SNVMNMNSRQHQIHEA 398 +W C + C PC+ DP S+V MNS Q +HEA Sbjct: 271 SWKGCTEDDFCVNPCFPDPCKSSVELMNSTQAPMHEA 307
>INO80_NEUCR (Q872I5) Putative DNA helicase ino-80 (EC 3.6.1.-)| Length = 2001 Score = 30.8 bits (68), Expect = 4.1 Identities = 28/78 (35%), Positives = 34/78 (43%) Frame = -3 Query: 633 SVRQPKARLDYDVGGSSARYADAYTERLGRSHVGYSSGRSVAGHDPVYSSSRHGLSYGGS 454 S P A + GSS R D +R R S RSV+GH SS R+ S Sbjct: 281 SFYDPTAEASNGISGSSPR-KDRDRDRDHRGTTRESQRRSVSGHSDTGSSWRNATQTSAS 339 Query: 453 ASTGDAGGNYTSNYSADY 400 T D NY+ + SADY Sbjct: 340 NKTRDP-YNYSPS-SADY 355
>SRY_MUSSP (Q62563) Sex-determining region Y protein (Testis-determining| factor) Length = 355 Score = 30.8 bits (68), Expect = 4.1 Identities = 22/93 (23%), Positives = 35/93 (37%), Gaps = 2/93 (2%) Frame = +3 Query: 333 YPCYDPSNVMNMNSRQHQIHEACSLHCNLKCNFHQHLQYLQNLHNSSHGGCCCTPGHDQR 512 +P N + ++ Q H+ H K FH H Q Q H+ HD + Sbjct: 142 HPQQQQQQFHNHHQQKQQFHD----HHQQKQQFHDHHQQQQQFHDHQQQQ---QQFHDHQ 194 Query: 513 QICRYCIPHETAQASQYKHLH--TEHCYHQHHN 605 Q + H+ Q + H H + +H HH+ Sbjct: 195 QQKQQFHDHQQQQQQFHDHHHQQQQQQFHDHHH 227
>IF38_MEDTR (Q9XHM1) Eukaryotic translation initiation factor 3 subunit 8 (eIF3| p110) (eIF3c) Length = 935 Score = 30.4 bits (67), Expect = 5.3 Identities = 25/82 (30%), Positives = 32/82 (39%) Frame = -3 Query: 660 DVPPRYHDISVRQPKARLDYDVGGSSARYADAYTERLGRSHVGYSSGRSVAGHDPVYSSS 481 D+PPR D A GG S + + L S SGR+ G S S Sbjct: 831 DLPPRRRDGQDYAAAA-----AGGGSGTSSGGRWQDLSYSQTRQGSGRTGYGGGRALSFS 885 Query: 480 RHGLSYGGSASTGDAGGNYTSN 415 + G S G S G GG Y ++ Sbjct: 886 QAGGSGGYSRGRGTGGGGYQNS 907
>SGF3_BOMMO (Q17237) Silk gland factor 3 (SGF-3) (POU domain protein M1)| Length = 351 Score = 30.4 bits (67), Expect = 5.3 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = +3 Query: 243 HTIHGLHQSPMVPHLSSMNWNHCHQSTHCCYPC 341 H HG H + PH + +HC + T C PC Sbjct: 92 HAAHGWHAPVVSPHYGAARPSHCMEDTQC--PC 122
>HYDL_STRHA (Q05355) Putative polyketide hydroxylase (EC 1.14.13.-)| Length = 555 Score = 30.4 bits (67), Expect = 5.3 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 6/68 (8%) Frame = -3 Query: 639 DISVRQPKARLDYDVGG------SSARYADAYTERLGRSHVGYSSGRSVAGHDPVYSSSR 478 D+ R P D D G S+ R A+ + L VG S+G + D V ++R Sbjct: 451 DLYERSPVLLSDADAGAPDAWHESAVRLAEELSVPLTSYRVGRSAGADLTPEDDVNWTAR 510 Query: 477 HGLSYGGS 454 HG GG+ Sbjct: 511 HGTPPGGA 518
>CUP9_DROME (P27781) Pupal cuticle protein Edg-91 precursor (Ecdysone-dependent| protein 91) Length = 159 Score = 30.4 bits (67), Expect = 5.3 Identities = 23/76 (30%), Positives = 29/76 (38%), Gaps = 14/76 (18%) Frame = -3 Query: 594 GGSSARYADAYTERLGRSHVGYSS--------------GRSVAGHDPVYSSSRHGLSYGG 457 GG YA Y G + GY+ G S GH P + HG Y G Sbjct: 61 GGYPGGYASGYPGGYGGGYSGYNGYGGSGFGGGYYPGGGYSGFGHRPHH----HGGYYPG 116 Query: 456 SASTGDAGGNYTSNYS 409 S + GG+Y +YS Sbjct: 117 GGSYHNQGGSYGGHYS 132
>SINA_DROWI (Q8I147) Ubiquitin ligase sina (EC 6.3.2.-) (Seven in absentia| protein) Length = 331 Score = 30.0 bits (66), Expect = 6.9 Identities = 22/55 (40%), Positives = 24/55 (43%) Frame = -3 Query: 597 VGGSSARYADAYTERLGRSHVGYSSGRSVAGHDPVYSSSRHGLSYGGSASTGDAG 433 VGG ++ A A T G S G SS SSS LS SA GDAG Sbjct: 28 VGGGASGVATANTNTTGSSSTGGSSSAGTTSSANTSSSSSSSLS---SAGGGDAG 79
>K22E_HUMAN (P35908) Keratin, type II cytoskeletal 2 epidermal (Cytokeratin-2e)| (K2e) (CK 2e) Length = 645 Score = 30.0 bits (66), Expect = 6.9 Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 6/45 (13%) Frame = -3 Query: 534 GYSSGRSVAGHDPVYSSSRHG------LSYGGSASTGDAGGNYTS 418 GYSSG S G S SR G +S GG S G +GG Y S Sbjct: 537 GYSSGSSSYGSGGRQSGSRGGSGGGGSISGGGYGSGGGSGGRYGS 581
>COFH_HALMA (Q5UXN1) FO synthase subunit 2 (EC 2.5.1.-)| (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 2) Length = 450 Score = 30.0 bits (66), Expect = 6.9 Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 6/82 (7%) Frame = +3 Query: 357 VMNMNSRQHQIHEACSLHCNLKCNFHQHLQYLQNLHNSSHGGCCCTPGHDQRQICRYCIP 536 V N+N+ + AC+ C L CNF + ++ + HGG TP + RQI + + Sbjct: 85 VANLNNN---VTTACNTGC-LFCNFKDRSEQFRSDYQEDHGGFTKTPS-ESRQIVQDALD 139 Query: 537 HETAQASQYKHLH------TEH 584 + LH TEH Sbjct: 140 RGIYEVCSVSGLHPALALDTEH 161
>K2C3_BOVIN (P04261) Keratin, type II cytoskeletal 60 kDa, component III| (Fragment) Length = 182 Score = 30.0 bits (66), Expect = 6.9 Identities = 16/45 (35%), Positives = 21/45 (46%) Frame = -3 Query: 534 GYSSGRSVAGHDPVYSSSRHGLSYGGSASTGDAGGNYTSNYSADY 400 G SG G YSSS G+ GG S G +G + +S S + Sbjct: 113 GLGSGLGGGGSSSFYSSSSGGVGLGGGLSVGGSGFSASSGRSLGF 157
>SNF1_CANAL (P52497) Carbon catabolite derepressing protein kinase (EC| 2.7.11.1) Length = 620 Score = 30.0 bits (66), Expect = 6.9 Identities = 10/24 (41%), Positives = 14/24 (58%) Frame = +3 Query: 534 PHETAQASQYKHLHTEHCYHQHHN 605 P +A Q++H H H +H HHN Sbjct: 7 PQASADQQQHQHNHHHHHHHHHHN 30
>K2C5_BOVIN (Q5XQN5) Keratin, type II cytoskeletal 5 (Cytokeratin-5) (CK-5)| (Keratin-5) (K5) Length = 601 Score = 30.0 bits (66), Expect = 6.9 Identities = 16/45 (35%), Positives = 21/45 (46%) Frame = -3 Query: 534 GYSSGRSVAGHDPVYSSSRHGLSYGGSASTGDAGGNYTSNYSADY 400 G SG G YSSS G+ GG S G +G + +S S + Sbjct: 532 GLGSGLGGGGSSSFYSSSSGGVGLGGGLSVGGSGFSASSGRSLGF 576
>TALA_POVM3 (P03074) Large T antigen| Length = 782 Score = 29.6 bits (65), Expect = 9.1 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = -3 Query: 528 SSGRSVAGHDPVYSSSRHGLSYGGSASTGDAGGNYTSN 415 + G S H P Y S S GGS S+G A G++ S+ Sbjct: 219 TGGTSTPAHPPPYHSQGGSESMGGSDSSGFAEGSFRSD 256
>TALA_POVMA (P03073) Large T antigen| Length = 785 Score = 29.6 bits (65), Expect = 9.1 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = -3 Query: 528 SSGRSVAGHDPVYSSSRHGLSYGGSASTGDAGGNYTSN 415 + G S H P Y S S GGS S+G A G++ S+ Sbjct: 219 TGGTSTPAHPPPYHSQGGSESMGGSDSSGFAEGSFRSD 256
>SRY_MUSSI (Q62565) Sex-determining region Y protein (Testis-determining| factor) Length = 311 Score = 29.6 bits (65), Expect = 9.1 Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 8/85 (9%) Frame = +3 Query: 375 RQHQIHEACSLHCNLKCNFHQHLQYLQNLHNSSHGGCCCTPGHDQRQICRYCIP------ 536 +Q Q H+ H + FH H Q Q LHN H + Q+Q + P Sbjct: 189 QQQQFHD--HHHHQQQQQFHDHQQQQQQLHNHHHQQQQQFHDYPQQQQQFHDHPQQKQQF 246 Query: 537 HETAQASQYKHLH--TEHCYHQHHN 605 H+ Q Q H H + +H HH+ Sbjct: 247 HDRPQQQQQFHDHHQQQQQFHDHHH 271
>TALA_POVMC (P12905) Large T antigen| Length = 777 Score = 29.6 bits (65), Expect = 9.1 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = -3 Query: 528 SSGRSVAGHDPVYSSSRHGLSYGGSASTGDAGGNYTSN 415 + G S H P Y S S GGS S+G A G++ S+ Sbjct: 214 TGGTSTPAHPPPYHSQGGSESMGGSDSSGFAEGSFRSD 251
>DDX3Y_MOUSE (Q62095) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box| protein 3, Y-chromosomal) (DEAD-box RNA helicase DEAD2) (mDEAD2) (D1Pas1-related sequence 1) Length = 658 Score = 29.6 bits (65), Expect = 9.1 Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 2/89 (2%) Frame = -3 Query: 678 SYVEMDDVPPRYHDISVRQPKARLDYDVGGSSARYADAYTERLGRSHVGYSSGRSVAGHD 499 S++E Y S + K+R GG AR Y + G ++ G++S R+ + Sbjct: 568 SWLESMAYEHHYKGSSRGRSKSRFS---GGFGAR---DYRQSSGSANAGFNSNRANSSRS 621 Query: 498 PVYSSSRH--GLSYGGSASTGDAGGNYTS 418 S +R G YGG + GGNY S Sbjct: 622 SGSSHNRGFGGGGYGGFYNNDGYGGNYNS 650
>GBLP_DROME (O18640) Guanine nucleotide-binding protein beta subunit-like| protein (Receptor of activated protein kinase C homolog) Length = 318 Score = 29.6 bits (65), Expect = 9.1 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = +3 Query: 408 HCNLKCNFHQHLQYLQNLHNSSHGGCCCTPGHDQRQI 518 +C LK N H H YL + S G C + G D + + Sbjct: 182 NCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKAL 218
>LORI_MOUSE (P18165) Loricrin| Length = 486 Score = 29.6 bits (65), Expect = 9.1 Identities = 20/58 (34%), Positives = 24/58 (41%) Frame = -3 Query: 594 GGSSARYADAYTERLGRSHVGYSSGRSVAGHDPVYSSSRHGLSYGGSASTGDAGGNYT 421 GGSS Y+ G S G SSG G Y +G GGS+ GG Y+ Sbjct: 241 GGSSCGGGGGYSGGGGSSCGGGSSGGGGGGSSQQYQCQSYG---GGSSGGSSCGGRYS 295
>PL10_MOUSE (P16381) Putative ATP-dependent RNA helicase Pl10 (EC 3.6.1.-)| Length = 660 Score = 29.6 bits (65), Expect = 9.1 Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 4/63 (6%) Frame = -3 Query: 594 GGSSARYADAYTERLGRSHVGYSSGRSVAGHDP--VYSSSRH--GLSYGGSASTGDAGGN 427 GG AR Y + G S +SSGR+ + SSR G SYGG ++ GGN Sbjct: 593 GGFGAR---DYRQSSGASSSSFSSGRASNSRSGGGSHGSSRGFGGGSYGGFYNSDGYGGN 649 Query: 426 YTS 418 Y+S Sbjct: 650 YSS 652 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 98,792,212 Number of Sequences: 219361 Number of extensions: 2155058 Number of successful extensions: 6744 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 6022 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6582 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6856295237 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
