ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags31d10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK101961.1| Oryza sativa (japonica cultivar-group) cDNA clon... 313 4e-82
2dbj|AK102135.1| Oryza sativa (japonica cultivar-group) cDNA clon... 313 4e-82
3ref|XM_473377.1| Oryza sativa (japonica cultivar-group), predic... 311 2e-81
4gb|AF533364.1| Zea mays water-stress protein (ws1) mRNA, complet... 131 3e-27
5gb|AY105396.1| Zea mays PCO118630 mRNA sequence 131 3e-27
6emb|AL606695.3|OSJN00112 Oryza sativa genomic DNA, chromosome 4,... 127 5e-26
7dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 127 5e-26
8emb|AL606728.3|OSJN00102 Oryza sativa genomic DNA, chromosome 4,... 127 5e-26
9gb|AY112183.1| Zea mays CL20199_1 mRNA sequence 70 1e-08
10gb|AC010003.8| Drosophila melanogaster 3L BAC RP98-6L11 (Roswell... 46 0.15
11gb|AE003521.3| Drosophila melanogaster chromosome 3L, section 64... 46 0.15
12gb|AC155335.1| Brassica rapa subsp. pekinensis chromosome Cytoge... 44 0.61
13gb|AY815835.1| Schistosoma japonicum SJCHGC03520 protein mRNA, c... 42 2.4
14gb|AC102666.13| Mus musculus chromosome 1, clone RP23-444A8, com... 42 2.4
15ref|XM_001000961.1| PREDICTED: Mus musculus RIKEN cDNA 5830417I1... 40 9.5
16ref|XM_001003850.1| PREDICTED: Mus musculus RIKEN cDNA 5830417I1... 40 9.5
17gb|AC127377.4| Mus musculus BAC clone RP23-51N3 from chromosome ... 40 9.5
18ref|XM_841415.1| Trypanosoma brucei TREU927 hypothetical protein... 40 9.5
19gb|AC120011.16| Mus musculus chromosome 5, clone RP24-211L21, co... 40 9.5
20gb|AC011504.3| Homo sapiens chromosome 19 clone CTD-2001J20, com... 40 9.5
21dbj|AK149017.1| Mus musculus 2 days neonate sympathetic ganglion... 40 9.5
22dbj|AK147575.1| Mus musculus cDNA, RIKEN full-length enriched li... 40 9.5
23emb|BX321915.3| Zebrafish DNA sequence from clone CH211-250C19 i... 40 9.5
24gb|AY040842.1| Mus musculus clone H5.1 unknown mRNA 40 9.5
25gb|AC154363.2| Mus musculus BAC clone RP23-154K12 from chromosom... 40 9.5
26dbj|AK032230.1| Mus musculus adult male olfactory brain cDNA, RI... 40 9.5
27dbj|AK017268.1| Mus musculus 6 days neonate head cDNA, RIKEN ful... 40 9.5
28emb|CT025705.11| Pig DNA sequence from clone CH242-277H17 on chr... 40 9.5
29dbj|AK122531.1| Mus musculus mRNA for mKIAA1606 protein 40 9.5
30emb|BX001051.29| Zebrafish DNA sequence from clone DKEYP-68F9 in... 40 9.5
31gb|BC108377.1| Mus musculus RIKEN cDNA 5830417I10 gene, mRNA (cD... 40 9.5
32gb|AC101660.25| Mus musculus chromosome 15, clone RP23-4I22, com... 40 9.5 
>dbj|AK101961.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076A11, full
            insert sequence
          Length = 3596

 Score =  313 bits (158), Expect = 4e-82
 Identities = 347/410 (84%)
 Strand = Plus / Minus

                                                                        
Query: 283  atcttagtagtatgaactggaaccactgccaccaaagtacccactgctgctacccgtgtt 342
            |||| |||| |||||||| |||||||| || ||| |||| ||||||||||||||    ||
Sbjct: 2464 atctcagtaatatgaactagaaccactaccgccatagtagccactgctgctacctacatt 2405

                                                                        
Query: 343  acgacccgagtaatgtgatgaatatgaactcccgccaacatcagatccacgaggcatgta 402
            ||| || |||||| |||||||||||||||| || ||||||||||| ||||||| ||||||
Sbjct: 2404 acgccctgagtaaagtgatgaatatgaacttccaccaacatcagacccacgagacatgta 2345

                                                                        
Query: 403  gtctgcactgtaatttgaagtgtaatttccaccagcatctccagtacttgcagaacctcc 462
            |    ||||| ||||||| | |||  |||||||||||||   | | ||||| ||||||||
Sbjct: 2344 gctaccactgaaatttgatgagtacattccaccagcatcattactgcttgcggaacctcc 2285

                                                                        
Query: 463  ataactcaagccatggcggctgctgctgtacaccgggtcatgaccagcgacagatctgcc 522
            |||||||| |||||| || |  || |||||||| || |||||||||| ||||||||||||
Sbjct: 2284 ataactcatgccatgccgaccactactgtacactggatcatgaccagagacagatctgcc 2225

                                                                        
Query: 523  gctactgtatcccacatgagaccgcccaagcctctcagtataagcatctgcataccgagc 582
             | |||||||||| |||| || || |||||||||||  |||| | |||||||||||| ||
Sbjct: 2224 accactgtatcccgcatgtgatcgtccaagcctctcgctatatgtatctgcataccgggc 2165

                                                                        
Query: 583  actgctaccaccaacatcataatctaagcgtgccttgggctgacgaacgctaatgtcgtg 642
            |||||| |||||||||||||| |||||||||||||| | ||||||||| |||||||| ||
Sbjct: 2164 actgctgccaccaacatcatagtctaagcgtgccttagactgacgaacactaatgtcatg 2105

                                                              
Query: 643  ataccgaggaggcacgtcatccatctcaacatatgagcgttttgaaccag 692
            ||| ||||| ||||| |||||||||||| |||||||||||||||||||||
Sbjct: 2104 atatcgaggtggcacatcatccatctcagcatatgagcgttttgaaccag 2055



 Score =  127 bits (64), Expect = 5e-26
 Identities = 132/153 (86%), Gaps = 5/153 (3%)
 Strand = Plus / Minus

                                                                        
Query: 22   aatgtttagaaacactggaagtaa-catgtcaacacaccatggctggcta----gttcac 76
            |||||||||||||||||||||||| |||| ||| | ||||| |||||| |    ||||||
Sbjct: 2767 aatgtttagaaacactggaagtaaacatgccaagataccatagctggcgattatgttcac 2708

                                                                        
Query: 77   aactcttgaccaactaaagcaaagccttacattaaataaacatgccggaacatccacaag 136
            || |||||||||| |||||||||||||||||||||| ||||  ||| |||||||||||||
Sbjct: 2707 aattcttgaccaaataaagcaaagccttacattaaagaaactagccagaacatccacaag 2648

                                             
Query: 137  actactgcttcaaccaactcgatgttcctgact 169
            |||| ||||| |||||||| | |||| ||||||
Sbjct: 2647 actattgctttaaccaacttggtgtttctgact 2615



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                        
Query: 207  cttgtccagatccacaggccttaagttaaggagctccatacaatccatggcctacaccaa 266
            ||||||||| |||  ||||||||| |||||||||||||||||||||  ||||||||||||
Sbjct: 2568 cttgtccaggtccgtaggccttaaattaaggagctccatacaatccggggcctacaccaa 2509

                           
Query: 267  tctcctatggtgcca 281
             |||||| |||||||
Sbjct: 2508 cctcctacggtgcca 2494
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>dbj|AK102135.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085H02, full
            insert sequence
          Length = 2835

 Score =  313 bits (158), Expect = 4e-82
 Identities = 347/410 (84%)
 Strand = Plus / Minus

                                                                        
Query: 283  atcttagtagtatgaactggaaccactgccaccaaagtacccactgctgctacccgtgtt 342
            |||| |||| |||||||| |||||||| || ||| |||| ||||||||||||||    ||
Sbjct: 2480 atctcagtaatatgaactagaaccactaccgccatagtagccactgctgctacctacatt 2421

                                                                        
Query: 343  acgacccgagtaatgtgatgaatatgaactcccgccaacatcagatccacgaggcatgta 402
            ||| || |||||| |||||||||||||||| || ||||||||||| ||||||| ||||||
Sbjct: 2420 acgccctgagtaaagtgatgaatatgaacttccaccaacatcagacccacgagacatgta 2361

                                                                        
Query: 403  gtctgcactgtaatttgaagtgtaatttccaccagcatctccagtacttgcagaacctcc 462
            |    ||||| ||||||| | |||  |||||||||||||   | | ||||| ||||||||
Sbjct: 2360 gctaccactgaaatttgatgagtacattccaccagcatcattactgcttgcggaacctcc 2301

                                                                        
Query: 463  ataactcaagccatggcggctgctgctgtacaccgggtcatgaccagcgacagatctgcc 522
            |||||||| |||||| || |  || |||||||| || |||||||||| ||||||||||||
Sbjct: 2300 ataactcatgccatgccgaccactactgtacactggatcatgaccagagacagatctgcc 2241

                                                                        
Query: 523  gctactgtatcccacatgagaccgcccaagcctctcagtataagcatctgcataccgagc 582
             | |||||||||| |||| || || |||||||||||  |||| | |||||||||||| ||
Sbjct: 2240 accactgtatcccgcatgtgatcgtccaagcctctcgctatatgtatctgcataccgggc 2181

                                                                        
Query: 583  actgctaccaccaacatcataatctaagcgtgccttgggctgacgaacgctaatgtcgtg 642
            |||||| |||||||||||||| |||||||||||||| | ||||||||| |||||||| ||
Sbjct: 2180 actgctgccaccaacatcatagtctaagcgtgccttagactgacgaacactaatgtcatg 2121

                                                              
Query: 643  ataccgaggaggcacgtcatccatctcaacatatgagcgttttgaaccag 692
            ||| ||||| ||||| |||||||||||| |||||||||||||||||||||
Sbjct: 2120 atatcgaggtggcacatcatccatctcagcatatgagcgttttgaaccag 2071



 Score =  127 bits (64), Expect = 5e-26
 Identities = 132/153 (86%), Gaps = 5/153 (3%)
 Strand = Plus / Minus

                                                                        
Query: 22   aatgtttagaaacactggaagtaa-catgtcaacacaccatggctggcta----gttcac 76
            |||||||||||||||||||||||| |||| ||| | ||||| |||||| |    ||||||
Sbjct: 2783 aatgtttagaaacactggaagtaaacatgccaagataccatagctggcgattatgttcac 2724

                                                                        
Query: 77   aactcttgaccaactaaagcaaagccttacattaaataaacatgccggaacatccacaag 136
            || |||||||||| |||||||||||||||||||||| ||||  ||| |||||||||||||
Sbjct: 2723 aattcttgaccaaataaagcaaagccttacattaaagaaactagccagaacatccacaag 2664

                                             
Query: 137  actactgcttcaaccaactcgatgttcctgact 169
            |||| ||||| |||||||| | |||| ||||||
Sbjct: 2663 actattgctttaaccaacttggtgtttctgact 2631



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                        
Query: 207  cttgtccagatccacaggccttaagttaaggagctccatacaatccatggcctacaccaa 266
            ||||||||| |||  ||||||||| |||||||||||||||||||||  ||||||||||||
Sbjct: 2584 cttgtccaggtccgtaggccttaaattaaggagctccatacaatccggggcctacaccaa 2525

                           
Query: 267  tctcctatggtgcca 281
             |||||| |||||||
Sbjct: 2524 cctcctacggtgcca 2510
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>ref|XM_473377.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2325

 Score =  311 bits (157), Expect = 2e-81
 Identities = 343/405 (84%)
 Strand = Plus / Minus

                                                                        
Query: 288  agtagtatgaactggaaccactgccaccaaagtacccactgctgctacccgtgttacgac 347
            |||| |||||||| |||||||| || ||| |||| ||||||||||||||    ||||| |
Sbjct: 2323 agtaatatgaactagaaccactaccgccatagtagccactgctgctacctacattacgcc 2264

                                                                        
Query: 348  ccgagtaatgtgatgaatatgaactcccgccaacatcagatccacgaggcatgtagtctg 407
            | |||||| |||||||||||||||| || ||||||||||| ||||||| |||||||    
Sbjct: 2263 ctgagtaaagtgatgaatatgaacttccaccaacatcagacccacgagacatgtagctac 2204

                                                                        
Query: 408  cactgtaatttgaagtgtaatttccaccagcatctccagtacttgcagaacctccataac 467
            ||||| ||||||| | |||  |||||||||||||   | | ||||| |||||||||||||
Sbjct: 2203 cactgaaatttgatgagtacattccaccagcatcattactgcttgcggaacctccataac 2144

                                                                        
Query: 468  tcaagccatggcggctgctgctgtacaccgggtcatgaccagcgacagatctgccgctac 527
            ||| |||||| || |  || |||||||| || |||||||||| |||||||||||| | ||
Sbjct: 2143 tcatgccatgccgaccactactgtacactggatcatgaccagagacagatctgccaccac 2084

                                                                        
Query: 528  tgtatcccacatgagaccgcccaagcctctcagtataagcatctgcataccgagcactgc 587
            |||||||| |||| || || |||||||||||  |||| | |||||||||||| |||||||
Sbjct: 2083 tgtatcccgcatgtgatcgtccaagcctctcgctatatgtatctgcataccgggcactgc 2024

                                                                        
Query: 588  taccaccaacatcataatctaagcgtgccttgggctgacgaacgctaatgtcgtgatacc 647
            | |||||||||||||| |||||||||||||| | ||||||||| |||||||| ||||| |
Sbjct: 2023 tgccaccaacatcatagtctaagcgtgccttagactgacgaacactaatgtcatgatatc 1964

                                                         
Query: 648  gaggaggcacgtcatccatctcaacatatgagcgttttgaaccag 692
            |||| ||||| |||||||||||| |||||||||||||||||||||
Sbjct: 1963 gaggtggcacatcatccatctcagcatatgagcgttttgaaccag 1919
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>gb|AF533364.1| Zea mays water-stress protein (ws1) mRNA, complete cds
          Length = 1748

 Score =  131 bits (66), Expect = 3e-27
 Identities = 140/164 (85%), Gaps = 3/164 (1%)
 Strand = Plus / Minus

                                                                        
Query: 235  aggagctccatacaatccatggcctacaccaatctcctatggtgccacatcttagtagta 294
            |||||||||||| ||| || ||||||||||||  ||||||| ||||| ||||||||| ||
Sbjct: 1514 aggagctccataaaatgcagggcctacaccaaagtcctatgatgccaaatcttagtaata 1455

                                                                        
Query: 295  tgaactggaaccactgccaccaaagtacccac---tgctgctacccgtgttacgacccga 351
            |||||||||||| || || ||| |||| ||||   ||||| |||||   || ||||||||
Sbjct: 1454 tgaactggaaccgctacctccatagtagccaccactgctggtacccaaattgcgacccga 1395

                                                        
Query: 352  gtaatgtgatgaatatgaactcccgccaacatcagatccacgag 395
            |||| |||| |||||||||||||| |||||||||||||||||||
Sbjct: 1394 gtaaagtgaagaatatgaactcccaccaacatcagatccacgag 1351



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 157/197 (79%)
 Strand = Plus / Minus

                                                                        
Query: 431  ccaccagcatctccagtacttgcagaacctccataactcaagccatggcggctgctgctg 490
            |||||||||||  || | || |||||||||||||||||||  ||||| ||||||||||  
Sbjct: 1315 ccaccagcatcagcactgctagcagaacctccataactcattccatgacggctgctgcca 1256

                                                                        
Query: 491  tacaccgggtcatgaccagcgacagatctgccgctactgtatcccacatgagaccgccca 550
            ||  | |  |||||| ||| || ||||| || |||||| |||||| |||| |  || |||
Sbjct: 1255 tatgctgaatcatgaacagggatagatcggctgctactatatcccgcatgtggtcgtcca 1196

                                                                        
Query: 551  agcctctcagtataagcatctgcataccgagcactgctaccaccaacatcataatctaag 610
              ||||||| |||| | |||| |||||||||||||||| |||||||  || || ||||| 
Sbjct: 1195 gacctctcactatatgtatctccataccgagcactgctgccaccaatgtcgtagtctaaa 1136

                             
Query: 611  cgtgccttgggctgacg 627
            |||||||| | ||||||
Sbjct: 1135 cgtgccttagactgacg 1119



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 76/90 (84%)
 Strand = Plus / Minus

                                                                        
Query: 71   gttcacaactcttgaccaactaaagcaaagccttacattaaataaacatgccggaacatc 130
            ||||| ||||||||||||  ||||||||| |||||||||| ||||||| ||| |||| ||
Sbjct: 1692 gttcagaactcttgaccagataaagcaaatccttacattacataaacaagccagaacgtc 1633

                                          
Query: 131  cacaagactactgcttcaaccaactcgatg 160
            | ||  |||||||||  |||||| ||||||
Sbjct: 1632 ctcagaactactgctcgaaccaaatcgatg 1603
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>gb|AY105396.1| Zea mays PCO118630 mRNA sequence
          Length = 1207

 Score =  131 bits (66), Expect = 3e-27
 Identities = 140/164 (85%), Gaps = 3/164 (1%)
 Strand = Plus / Minus

                                                                       
Query: 235 aggagctccatacaatccatggcctacaccaatctcctatggtgccacatcttagtagta 294
           |||||||||||| ||| || ||||||||||||  ||||||| ||||| ||||||||| ||
Sbjct: 883 aggagctccataaaatgcagggcctacaccaaagtcctatgatgccaaatcttagtaata 824

                                                                       
Query: 295 tgaactggaaccactgccaccaaagtacccac---tgctgctacccgtgttacgacccga 351
           |||||||||||| || || ||| |||| ||||   ||||| |||||   || ||||||||
Sbjct: 823 tgaactggaaccgctacctccatagtagccaccactgctggtacccaaattgcgacccga 764

                                                       
Query: 352 gtaatgtgatgaatatgaactcccgccaacatcagatccacgag 395
           |||| |||| |||||||||||||| |||||||||||||||||||
Sbjct: 763 gtaaagtgaagaatatgaactcccaccaacatcagatccacgag 720



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 157/197 (79%)
 Strand = Plus / Minus

                                                                       
Query: 431 ccaccagcatctccagtacttgcagaacctccataactcaagccatggcggctgctgctg 490
           |||||||||||  || | || |||||||||||||||||||  ||||| |||||||| |  
Sbjct: 684 ccaccagcatcagcactgctagcagaacctccataactcattccatgacggctgctacca 625

                                                                       
Query: 491 tacaccgggtcatgaccagcgacagatctgccgctactgtatcccacatgagaccgccca 550
           ||  | |  |||||||||| || ||||| || |||||| |||||| |||| |  || |||
Sbjct: 624 tatgctgaatcatgaccagggatagatcggctgctactatatcccgcatgtggtcgtcca 565

                                                                       
Query: 551 agcctctcagtataagcatctgcataccgagcactgctaccaccaacatcataatctaag 610
             ||||||| |||| | |||| |||||||||||||||| |||||||  || || ||||| 
Sbjct: 564 gacctctcactatatgtatctccataccgagcactgctgccaccaatgtcgtagtctaaa 505

                            
Query: 611 cgtgccttgggctgacg 627
           |||||||| | ||||||
Sbjct: 504 cgtgccttagactgacg 488



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 76/90 (84%)
 Strand = Plus / Minus

                                                                        
Query: 71   gttcacaactcttgaccaactaaagcaaagccttacattaaataaacatgccggaacatc 130
            ||||| ||||||||||||  ||||||||| |||||||||| ||||||| ||| |||| ||
Sbjct: 1061 gttcagaactcttgaccagataaagcaaatccttacattacataaacaagccagaacgtc 1002

                                          
Query: 131  cacaagactactgcttcaaccaactcgatg 160
            | ||  |||||||||  |||||| ||||||
Sbjct: 1001 ctcagaactactgctcgaaccaaatcgatg 972
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>emb|AL606695.3|OSJN00112 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0103I08,
              complete sequence
          Length = 140449

 Score =  127 bits (64), Expect = 5e-26
 Identities = 132/153 (86%), Gaps = 5/153 (3%)
 Strand = Plus / Minus

                                                                          
Query: 22     aatgtttagaaacactggaagtaa-catgtcaacacaccatggctggcta----gttcac 76
              |||||||||||||||||||||||| |||| ||| | ||||| |||||| |    ||||||
Sbjct: 120770 aatgtttagaaacactggaagtaaacatgccaagataccatagctggcgattatgttcac 120711

                                                                          
Query: 77     aactcttgaccaactaaagcaaagccttacattaaataaacatgccggaacatccacaag 136
              || |||||||||| |||||||||||||||||||||| ||||  ||| |||||||||||||
Sbjct: 120710 aattcttgaccaaataaagcaaagccttacattaaagaaactagccagaacatccacaag 120651

                                               
Query: 137    actactgcttcaaccaactcgatgttcctgact 169
              |||| ||||| |||||||| | |||| ||||||
Sbjct: 120650 actattgctttaaccaacttggtgtttctgact 120618



 Score =  113 bits (57), Expect = 8e-22
 Identities = 87/97 (89%)
 Strand = Plus / Minus

                                                                          
Query: 568    atctgcataccgagcactgctaccaccaacatcataatctaagcgtgccttgggctgacg 627
              |||||||||||| |||||||| |||||||||||||| |||||||||||||| | ||||||
Sbjct: 119674 atctgcataccgggcactgctgccaccaacatcatagtctaagcgtgccttagactgacg 119615

                                                   
Query: 628    aacgctaatgtcgtgataccgaggaggcacgtcatcc 664
              ||| |||||||| ||||| ||||| ||||| ||||||
Sbjct: 119614 aacactaatgtcatgatatcgaggtggcacatcatcc 119578



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                          
Query: 207    cttgtccagatccacaggccttaagttaaggagctccatacaatccatggcctacaccaa 266
              ||||||||| |||  ||||||||| |||||||||||||||||||||  ||||||||||||
Sbjct: 120571 cttgtccaggtccgtaggccttaaattaaggagctccatacaatccggggcctacaccaa 120512

                             
Query: 267    tctcctatggtgcca 281
               |||||| |||||||
Sbjct: 120511 cctcctacggtgcca 120497



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 84/99 (84%)
 Strand = Plus / Minus

                                                                          
Query: 457    acctccataactcaagccatggcggctgctgctgtacaccgggtcatgaccagcgacaga 516
              |||||||||||||| |||||| || |  || |||||||| || |||||||||| ||||||
Sbjct: 119872 acctccataactcatgccatgccgaccactactgtacactggatcatgaccagagacaga 119813

                                                     
Query: 517    tctgccgctactgtatcccacatgagaccgcccaagcct 555
              |||||| | |||||||||| |||| || || ||||||||
Sbjct: 119812 tctgccaccactgtatcccgcatgtgatcgtccaagcct 119774



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 79/94 (84%)
 Strand = Plus / Minus

                                                                          
Query: 288    agtagtatgaactggaaccactgccaccaaagtacccactgctgctacccgtgttacgac 347
              |||| |||||||| |||||||| || ||| |||| ||||||||||||||    ||||| |
Sbjct: 120256 agtaatatgaactagaaccactaccgccatagtagccactgctgctacctacattacgcc 120197

                                                
Query: 348    ccgagtaatgtgatgaatatgaactcccgccaac 381
              | |||||| |||||||||||||||| || |||||
Sbjct: 120196 ctgagtaaagtgatgaatatgaacttccaccaac 120163



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                            
Query: 663    ccatctcaacatatgagcgttttgaaccag 692
              |||||||| |||||||||||||||||||||
Sbjct: 119491 ccatctcagcatatgagcgttttgaaccag 119462
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  127 bits (64), Expect = 5e-26
 Identities = 132/153 (86%), Gaps = 5/153 (3%)
 Strand = Plus / Minus

                                                                            
Query: 22       aatgtttagaaacactggaagtaa-catgtcaacacaccatggctggcta----gttcac 76
                |||||||||||||||||||||||| |||| ||| | ||||| |||||| |    ||||||
Sbjct: 27178127 aatgtttagaaacactggaagtaaacatgccaagataccatagctggcgattatgttcac 27178068

                                                                            
Query: 77       aactcttgaccaactaaagcaaagccttacattaaataaacatgccggaacatccacaag 136
                || |||||||||| |||||||||||||||||||||| ||||  ||| |||||||||||||
Sbjct: 27178067 aattcttgaccaaataaagcaaagccttacattaaagaaactagccagaacatccacaag 27178008

                                                 
Query: 137      actactgcttcaaccaactcgatgttcctgact 169
                |||| ||||| |||||||| | |||| ||||||
Sbjct: 27178007 actattgctttaaccaacttggtgtttctgact 27177975



 Score =  113 bits (57), Expect = 8e-22
 Identities = 87/97 (89%)
 Strand = Plus / Minus

                                                                            
Query: 568      atctgcataccgagcactgctaccaccaacatcataatctaagcgtgccttgggctgacg 627
                |||||||||||| |||||||| |||||||||||||| |||||||||||||| | ||||||
Sbjct: 27177031 atctgcataccgggcactgctgccaccaacatcatagtctaagcgtgccttagactgacg 27176972

                                                     
Query: 628      aacgctaatgtcgtgataccgaggaggcacgtcatcc 664
                ||| |||||||| ||||| ||||| ||||| ||||||
Sbjct: 27176971 aacactaatgtcatgatatcgaggtggcacatcatcc 27176935



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                            
Query: 207      cttgtccagatccacaggccttaagttaaggagctccatacaatccatggcctacaccaa 266
                ||||||||| |||  ||||||||| |||||||||||||||||||||  ||||||||||||
Sbjct: 27177928 cttgtccaggtccgtaggccttaaattaaggagctccatacaatccggggcctacaccaa 27177869

                               
Query: 267      tctcctatggtgcca 281
                 |||||| |||||||
Sbjct: 27177868 cctcctacggtgcca 27177854



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 84/99 (84%)
 Strand = Plus / Minus

                                                                            
Query: 457      acctccataactcaagccatggcggctgctgctgtacaccgggtcatgaccagcgacaga 516
                |||||||||||||| |||||| || |  || |||||||| || |||||||||| ||||||
Sbjct: 27177229 acctccataactcatgccatgccgaccactactgtacactggatcatgaccagagacaga 27177170

                                                       
Query: 517      tctgccgctactgtatcccacatgagaccgcccaagcct 555
                |||||| | |||||||||| |||| || || ||||||||
Sbjct: 27177169 tctgccaccactgtatcccgcatgtgatcgtccaagcct 27177131



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 79/94 (84%)
 Strand = Plus / Minus

                                                                            
Query: 288      agtagtatgaactggaaccactgccaccaaagtacccactgctgctacccgtgttacgac 347
                |||| |||||||| |||||||| || ||| |||| ||||||||||||||    ||||| |
Sbjct: 27177613 agtaatatgaactagaaccactaccgccatagtagccactgctgctacctacattacgcc 27177554

                                                  
Query: 348      ccgagtaatgtgatgaatatgaactcccgccaac 381
                | |||||| |||||||||||||||| || |||||
Sbjct: 27177553 ctgagtaaagtgatgaatatgaacttccaccaac 27177520



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                              
Query: 663      ccatctcaacatatgagcgttttgaaccag 692
                |||||||| |||||||||||||||||||||
Sbjct: 27176848 ccatctcagcatatgagcgttttgaaccag 27176819
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>emb|AL606728.3|OSJN00102 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0038F03,
            complete sequence
          Length = 136656

 Score =  127 bits (64), Expect = 5e-26
 Identities = 132/153 (86%), Gaps = 5/153 (3%)
 Strand = Plus / Minus

                                                                        
Query: 22   aatgtttagaaacactggaagtaa-catgtcaacacaccatggctggcta----gttcac 76
            |||||||||||||||||||||||| |||| ||| | ||||| |||||| |    ||||||
Sbjct: 9217 aatgtttagaaacactggaagtaaacatgccaagataccatagctggcgattatgttcac 9158

                                                                        
Query: 77   aactcttgaccaactaaagcaaagccttacattaaataaacatgccggaacatccacaag 136
            || |||||||||| |||||||||||||||||||||| ||||  ||| |||||||||||||
Sbjct: 9157 aattcttgaccaaataaagcaaagccttacattaaagaaactagccagaacatccacaag 9098

                                             
Query: 137  actactgcttcaaccaactcgatgttcctgact 169
            |||| ||||| |||||||| | |||| ||||||
Sbjct: 9097 actattgctttaaccaacttggtgtttctgact 9065



 Score =  113 bits (57), Expect = 8e-22
 Identities = 87/97 (89%)
 Strand = Plus / Minus

                                                                        
Query: 568  atctgcataccgagcactgctaccaccaacatcataatctaagcgtgccttgggctgacg 627
            |||||||||||| |||||||| |||||||||||||| |||||||||||||| | ||||||
Sbjct: 8121 atctgcataccgggcactgctgccaccaacatcatagtctaagcgtgccttagactgacg 8062

                                                 
Query: 628  aacgctaatgtcgtgataccgaggaggcacgtcatcc 664
            ||| |||||||| ||||| ||||| ||||| ||||||
Sbjct: 8061 aacactaatgtcatgatatcgaggtggcacatcatcc 8025



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                        
Query: 207  cttgtccagatccacaggccttaagttaaggagctccatacaatccatggcctacaccaa 266
            ||||||||| |||  ||||||||| |||||||||||||||||||||  ||||||||||||
Sbjct: 9018 cttgtccaggtccgtaggccttaaattaaggagctccatacaatccggggcctacaccaa 8959

                           
Query: 267  tctcctatggtgcca 281
             |||||| |||||||
Sbjct: 8958 cctcctacggtgcca 8944



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 84/99 (84%)
 Strand = Plus / Minus

                                                                        
Query: 457  acctccataactcaagccatggcggctgctgctgtacaccgggtcatgaccagcgacaga 516
            |||||||||||||| |||||| || |  || |||||||| || |||||||||| ||||||
Sbjct: 8319 acctccataactcatgccatgccgaccactactgtacactggatcatgaccagagacaga 8260

                                                   
Query: 517  tctgccgctactgtatcccacatgagaccgcccaagcct 555
            |||||| | |||||||||| |||| || || ||||||||
Sbjct: 8259 tctgccaccactgtatcccgcatgtgatcgtccaagcct 8221



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 79/94 (84%)
 Strand = Plus / Minus

                                                                        
Query: 288  agtagtatgaactggaaccactgccaccaaagtacccactgctgctacccgtgttacgac 347
            |||| |||||||| |||||||| || ||| |||| ||||||||||||||    ||||| |
Sbjct: 8703 agtaatatgaactagaaccactaccgccatagtagccactgctgctacctacattacgcc 8644

                                              
Query: 348  ccgagtaatgtgatgaatatgaactcccgccaac 381
            | |||||| |||||||||||||||| || |||||
Sbjct: 8643 ctgagtaaagtgatgaatatgaacttccaccaac 8610



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 663  ccatctcaacatatgagcgttttgaaccag 692
            |||||||| |||||||||||||||||||||
Sbjct: 7938 ccatctcagcatatgagcgttttgaaccag 7909
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>gb|AY112183.1| Zea mays CL20199_1 mRNA sequence
          Length = 430

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 68/79 (86%)
 Strand = Plus / Plus

                                                                       
Query: 77  aactcttgaccaactaaagcaaagccttacattaaataaacatgccggaacatccacaag 136
           ||||||||| ||  ||||||||| |||||||||| |||| || ||| |||||||| |  |
Sbjct: 3   aactcttgatcagataaagcaaatccttacattacataagcaagccagaacatcctcggg 62

                              
Query: 137 actactgcttcaaccaact 155
           |||||||||||||||||||
Sbjct: 63  actactgcttcaaccaact 81
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>gb|AC010003.8| Drosophila melanogaster 3L BAC RP98-6L11 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 183291

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 91     taaagcaaagccttacattaaat 113
              |||||||||||||||||||||||
Sbjct: 106941 taaagcaaagccttacattaaat 106963
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>gb|AE003521.3| Drosophila melanogaster chromosome 3L, section 64 of 83 of the complete
              sequence
          Length = 271237

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 91     taaagcaaagccttacattaaat 113
              |||||||||||||||||||||||
Sbjct: 140971 taaagcaaagccttacattaaat 140993
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>gb|AC155335.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1
             clone KBrH001H24, complete sequence
          Length = 118144

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 315   caaagtacccactgctgctacc 336
             ||||||||||||||||||||||
Sbjct: 77366 caaagtacccactgctgctacc 77345
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>gb|AY815835.1| Schistosoma japonicum SJCHGC03520 protein mRNA, complete cds
          Length = 672

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 155 tcgatgttcctgactccttcaaaca 179
           ||||||||||||||| |||||||||
Sbjct: 404 tcgatgttcctgactgcttcaaaca 428
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>gb|AC102666.13| Mus musculus chromosome 1, clone RP23-444A8, complete sequence
          Length = 169085

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 589   accaccaacatcataatctaa 609
             |||||||||||||||||||||
Sbjct: 48654 accaccaacatcataatctaa 48634
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>ref|XM_001000961.1| PREDICTED: Mus musculus RIKEN cDNA 5830417I10 gene (5830417I10Rik),
           mRNA
          Length = 6305

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 318 agtacccactgctgctaccc 337
           ||||||||||||||||||||
Sbjct: 263 agtacccactgctgctaccc 282
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>ref|XM_001003850.1| PREDICTED: Mus musculus RIKEN cDNA 5830417I10 gene (5830417I10Rik),
           mRNA
          Length = 1919

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 318 agtacccactgctgctaccc 337
           ||||||||||||||||||||
Sbjct: 628 agtacccactgctgctaccc 647
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>gb|AC127377.4| Mus musculus BAC clone RP23-51N3 from chromosome 3, complete sequence
          Length = 195767

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 318    agtacccactgctgctaccc 337
              ||||||||||||||||||||
Sbjct: 112266 agtacccactgctgctaccc 112285



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   agtacccactgctgctaccc 337
             ||||||||||||||||||||
Sbjct: 37494 agtacccactgctgctaccc 37513



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   agtacccactgctgctaccc 337
             ||||||||||||||||||||
Sbjct: 33456 agtacccactgctgctaccc 33475
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>ref|XM_841415.1| Trypanosoma brucei TREU927 hypothetical protein (Tb927.1.4740)
            partial mRNA
          Length = 3180

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 471  agccatggcggctgctgctg 490
            ||||||||||||||||||||
Sbjct: 2268 agccatggcggctgctgctg 2287
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>gb|AC120011.16| Mus musculus chromosome 5, clone RP24-211L21, complete sequence
          Length = 159960

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 157   gatgttcctgactccttcaaacat 180
             |||||||||||| |||||||||||
Sbjct: 35434 gatgttcctgaccccttcaaacat 35411
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>gb|AC011504.3| Homo sapiens chromosome 19 clone CTD-2001J20, complete sequence
          Length = 137075

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    ctaaagcaaagccttacatt 109
             ||||||||||||||||||||
Sbjct: 46567 ctaaagcaaagccttacatt 46548
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>dbj|AK149017.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN
           full-length enriched library, clone:7120476H04
           product:unclassifiable, full insert sequence
          Length = 2020

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 318 agtacccactgctgctaccc 337
           ||||||||||||||||||||
Sbjct: 863 agtacccactgctgctaccc 844
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>dbj|AK147575.1| Mus musculus cDNA, RIKEN full-length enriched library,
            clone:M5C1081D17 product:weakly similar to YY1 associated
            protein [Homo sapiens], full insert sequence
          Length = 7534

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 318  agtacccactgctgctaccc 337
            ||||||||||||||||||||
Sbjct: 2970 agtacccactgctgctaccc 2989
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>emb|BX321915.3| Zebrafish DNA sequence from clone CH211-250C19 in linkage group 9,
             complete sequence
          Length = 123689

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 98    aagccttacattaaataaac 117
             ||||||||||||||||||||
Sbjct: 51571 aagccttacattaaataaac 51552
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>gb|AY040842.1| Mus musculus clone H5.1 unknown mRNA
          Length = 4100

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 318 agtacccactgctgctaccc 337
           ||||||||||||||||||||
Sbjct: 931 agtacccactgctgctaccc 950
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>gb|AC154363.2| Mus musculus BAC clone RP23-154K12 from chromosome 13, complete sequence
          Length = 203241

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 406    tgcactgtaatttgaagtgt 425
              ||||||||||||||||||||
Sbjct: 159018 tgcactgtaatttgaagtgt 159037
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>dbj|AK032230.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
           enriched library, clone:6430508D20
           product:unclassifiable, full insert sequence
          Length = 3187

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 318 agtacccactgctgctaccc 337
           ||||||||||||||||||||
Sbjct: 524 agtacccactgctgctaccc 505
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>dbj|AK017268.1| Mus musculus 6 days neonate head cDNA, RIKEN full-length enriched
           library, clone:5430404N14 product:RIKEN cDNA 5430404N14
           gene, full insert sequence
          Length = 1415

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 318 agtacccactgctgctaccc 337
           ||||||||||||||||||||
Sbjct: 623 agtacccactgctgctaccc 604
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>emb|CT025705.11| Pig DNA sequence from clone CH242-277H17 on chromosome 3, complete
              sequence
          Length = 181740

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 437    gcatctccagtacttgcaga 456
              ||||||||||||||||||||
Sbjct: 127609 gcatctccagtacttgcaga 127628
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>dbj|AK122531.1| Mus musculus mRNA for mKIAA1606 protein
          Length = 6909

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 318  agtacccactgctgctaccc 337
            ||||||||||||||||||||
Sbjct: 2340 agtacccactgctgctaccc 2359
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>emb|BX001051.29| Zebrafish DNA sequence from clone DKEYP-68F9 in linkage group 9,
             complete sequence
          Length = 213486

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 98    aagccttacattaaataaac 117
             ||||||||||||||||||||
Sbjct: 53557 aagccttacattaaataaac 53538
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>gb|BC108377.1| Mus musculus RIKEN cDNA 5830417I10 gene, mRNA (cDNA clone
            IMAGE:30111244), partial cds
          Length = 6837

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 318  agtacccactgctgctaccc 337
            ||||||||||||||||||||
Sbjct: 2259 agtacccactgctgctaccc 2278
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>gb|AC101660.25| Mus musculus chromosome 15, clone RP23-4I22, complete sequence
          Length = 188464

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 582    cactgctaccaccaacatca 601
              ||||||||||||||||||||
Sbjct: 129598 cactgctaccaccaacatca 129617


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,171,842
Number of Sequences: 3902068
Number of extensions: 5171842
Number of successful extensions: 92173
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92047
Number of HSP's gapped (non-prelim): 107
length of query: 692
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 669
effective length of database: 17,143,297,704
effective search space: 11468866163976
effective search space used: 11468866163976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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