ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags30o06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PUR8_MOUSE (P54822) Adenylosuccinate lyase (EC 4.3.2.2) (Adenylo... 33 0.89
2PUR8_MACFA (Q8HXY5) Adenylosuccinate lyase (EC 4.3.2.2) (Adenylo... 33 0.89
3PUR8_HUMAN (P30566) Adenylosuccinate lyase (EC 4.3.2.2) (Adenylo... 33 0.89
4PUR8_CHICK (P21265) Adenylosuccinate lyase (EC 4.3.2.2) (Adenylo... 31 2.6
5PRY3_YEAST (P47033) Protein PRY3 (Pathogen related in Sc 3) 31 3.4
6PUR4_SHEON (Q8EC57) Phosphoribosylformylglycinamidine synthase (... 31 3.4
7SRR1L_DROME (Q9VEB5) SRR1-like protein 30 7.6
8G13B_DICDI (P34116) Cell surface glycoprotein gp138B precursor 29 9.9

>PUR8_MOUSE (P54822) Adenylosuccinate lyase (EC 4.3.2.2) (Adenylosuccinase)|
           (ASL) (ASASE)
          Length = 484

 Score = 32.7 bits (73), Expect = 0.89
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +1

Query: 139 LINLTEMSK*HDYISVNYSSICYSGNPLRSD*CCCLASRIV 261
           L NL EM +  +   +  S++ Y  NP+RS+ CC LA  ++
Sbjct: 272 LANLKEMEEPFEKQQIGSSAMPYKRNPMRSERCCSLARHLM 312



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>PUR8_MACFA (Q8HXY5) Adenylosuccinate lyase (EC 4.3.2.2) (Adenylosuccinase)|
           (ASL) (ASASE)
          Length = 484

 Score = 32.7 bits (73), Expect = 0.89
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +1

Query: 139 LINLTEMSK*HDYISVNYSSICYSGNPLRSD*CCCLASRIV 261
           L NL EM +  +   +  S++ Y  NP+RS+ CC LA  ++
Sbjct: 272 LANLKEMEEPFEKQQIGSSAMPYKRNPMRSERCCSLARHLM 312



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>PUR8_HUMAN (P30566) Adenylosuccinate lyase (EC 4.3.2.2) (Adenylosuccinase)|
           (ASL) (ASASE)
          Length = 484

 Score = 32.7 bits (73), Expect = 0.89
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +1

Query: 139 LINLTEMSK*HDYISVNYSSICYSGNPLRSD*CCCLASRIV 261
           L NL EM +  +   +  S++ Y  NP+RS+ CC LA  ++
Sbjct: 272 LANLKEMEEPFEKQQIGSSAMPYKRNPMRSERCCSLARHLM 312



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>PUR8_CHICK (P21265) Adenylosuccinate lyase (EC 4.3.2.2) (Adenylosuccinase)|
           (ASL) (ASASE)
          Length = 459

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +1

Query: 139 LINLTEMSK*HDYISVNYSSICYSGNPLRSD*CCCLASRIV 261
           L NL E+ +  +   +  S++ Y  NP+RS+ CC LA  ++
Sbjct: 247 LANLKEIEEPFEKDQIGSSAMPYKRNPMRSERCCSLARHLM 287



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>PRY3_YEAST (P47033) Protein PRY3 (Pathogen related in Sc 3)|
          Length = 881

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 29/134 (21%), Positives = 57/134 (42%)
 Frame = +1

Query: 214 NPLRSD*CCCLASRIVQTAGSAPKASVS*QSLSLKLTCLE*IGSSVKGPKADTSNRWSEA 393
           NP ++      +S ++ ++  +  +S    + S  +T      SS       TS+  + +
Sbjct: 216 NPAKTATLTASSSTVITSSTESVGSSTVSSASSSSVTTSYATSSSTVVSSDATSSTTTTS 275

Query: 394 SLLTKGMS*SSSTIVKDACFNNTDPGNSSAAVAGQWSMIEPGMSFAAVLTWYCSEPEPR* 573
           S+ T   + SS      A  +++DP +SSAA +   S      S +A+ +       P  
Sbjct: 276 SVATSSSTTSSDPTSSTAAASSSDPASSSAAASSSASTENAASSSSAISSSSSMVSAPLS 335

Query: 574 TLMSIDASSSFGVT 615
           + ++   +SS  VT
Sbjct: 336 STLTTSTASSRSVT 349



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>PUR4_SHEON (Q8EC57) Phosphoribosylformylglycinamidine synthase (EC 6.3.5.3)|
           (FGAM synthase) (FGAMS) (Formylglycinamide ribotide
           amidotransferase) (FGARAT) (Formylglycinamide ribotide
           synthetase)
          Length = 1293

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
 Frame = -2

Query: 623 SIRVTPNEEDASIDISVYLGSGSEQYHVSTAANDIPGSIMLHCPATAAEEFPGSVL---L 453
           ++R  P++E     + ++     E+Y +S AA D+P    L       E  P +V+   +
Sbjct: 524 NLRNVPSDEPGMSPLEIWCNESQERYVLSVAAEDLP----LFTAICERERAPFAVVGEAI 579

Query: 452 KQASLTMVDEDYD 414
           ++  LT+ D  +D
Sbjct: 580 QEQHLTLADSHFD 592



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>SRR1L_DROME (Q9VEB5) SRR1-like protein|
          Length = 276

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = -2

Query: 458 LLKQASLTMVDEDYDIPFVSNDASLHRFDVSALGPFTDEPIYSR 327
           +++  + T +++DY+   V ND SLH F   +L    DE  ++R
Sbjct: 206 IVEHCTETPLEDDYEHHNVFNDLSLHTFPQESLPGSNDEAFWTR 249



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>G13B_DICDI (P34116) Cell surface glycoprotein gp138B precursor|
          Length = 734

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
 Frame = -2

Query: 578 SVYLGSGSEQYHVSTAANDIPGSIMLHCPATAAEEFPGSVLLKQASLTMVDEDYDIPFVS 399
           ++Y+ S    Y + T  N  P    L  P T    FP ++     SL   +  Y   +V+
Sbjct: 160 NLYVNSPLTGYSIPTLINVNPYLENLQLPVTYYSGFPSNI-----SLAFPNLQYLTIYVN 214

Query: 398 NDA---SLHRFDVSALGPF 351
           ND    + H F +S +G F
Sbjct: 215 NDMDQNNYHNFSISNIGVF 233


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,081,994
Number of Sequences: 219361
Number of extensions: 1557943
Number of successful extensions: 2959
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2958
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5710231900
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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