| Clone Name | rbags30n22 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK112023.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-H05, full insert sequence Length = 1693 Score = 343 bits (173), Expect = 4e-91 Identities = 245/269 (91%) Strand = Plus / Minus Query: 368 aattggcttcttgaactgcacaaggatcatcgtcatgttgtcgcatccttctccacctaa 427 ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| || Sbjct: 1288 aattggcttcttgaactgcactaggatcattgtcatgttgtcgcatccttctccacccaa 1229 Query: 428 tgttgatggagccaggcatctatcgagcaccttttcacacactgcagaaaggctactctc 487 ||||||||||||||||||||||| ||||| |||| || || ||||||||||| ||||| Sbjct: 1228 agttgatggagccaggcatctatctagcactctttcgcataccgcagaaaggctgctctc 1169 Query: 488 tgtctttaagtgttcatggatgaaatcgaccagctgttggctcgacatgcagtcccaaat 547 ||| |||| |||||| ||||||||||| |||||||||||||| |||||||||||||| || Sbjct: 1168 tgtgtttatgtgttcgtggatgaaatcaaccagctgttggctagacatgcagtcccagat 1109 Query: 548 gccatcacatgctaaaacaagaaaatcatcatcatcacaaagctcgacagtgtttacgtc 607 |||||||||||||||||||||||| |||||||||||||||||||| || ||||| | ||| Sbjct: 1108 gccatcacatgctaaaacaagaaagtcatcatcatcacaaagctccactgtgttgatgtc 1049 Query: 608 agggtttgctgtcaacatttgcttatcag 636 ||||||||| || |||||||||||||||| Sbjct: 1048 agggtttgcagttaacatttgcttatcag 1020
>gb|AY106158.1| Zea mays PCO109280 mRNA sequence Length = 813 Score = 258 bits (130), Expect = 2e-65 Identities = 232/266 (87%) Strand = Plus / Minus Query: 371 tggcttcttgaactgcacaaggatcatcgtcatgttgtcgcatccttctccacctaatgt 430 |||||||||||||||||| ||||||||||||||||| |||||||| || ||||| | || Sbjct: 387 tggcttcttgaactgcaccaggatcatcgtcatgttatcgcatccctcgccacccatggt 328 Query: 431 tgatggagccaggcatctatcgagcaccttttcacacactgcagaaaggctactctctgt 490 |||||||||||||||||||| ||||| ||||||| |||||||||||||| |||||| Sbjct: 327 cgatggagccaggcatctatcaagcactctttcacatactgcagaaaggctttcctctgt 268 Query: 491 ctttaagtgttcatggatgaaatcgaccagctgttggctcgacatgcagtcccaaatgcc 550 |||| |||||| |||||||||| |||| ||| ||||| |||||||||||||||||||| Sbjct: 267 gtttatatgttcacggatgaaatcaaccaactgctggcttgacatgcagtcccaaatgcc 208 Query: 551 atcacatgctaaaacaagaaaatcatcatcatcacaaagctcgacagtgtttacgtcagg 610 ||||||||||||||||| || || || || ||||| ||||||||| |||||| |||||| Sbjct: 207 atcacatgctaaaacaatgaattcgtcgtcgtcacatagctcgacaatgtttatgtcagg 148 Query: 611 gtttgctgtcaacatttgcttatcag 636 |||||| ||||| ||||||||||||| Sbjct: 147 gtttgcggtcaaaatttgcttatcag 122
>gb|AF213455.1|AF213455 Zea mays protein phosphatase type-2C (pp2c-1) mRNA, complete cds Length = 1107 Score = 242 bits (122), Expect = 1e-60 Identities = 230/266 (86%) Strand = Plus / Minus Query: 371 tggcttcttgaactgcacaaggatcatcgtcatgttgtcgcatccttctccacctaatgt 430 |||||||||||||||||| | ||||||||||||||| |||||||| || ||||| | || Sbjct: 996 tggcttcttgaactgcaccaagatcatcgtcatgttatcgcatccctcgccacccatggt 937 Query: 431 tgatggagccaggcatctatcgagcaccttttcacacactgcagaaaggctactctctgt 490 |||||||||||||||||||| ||||| |||||| |||||||||||||| |||||| Sbjct: 936 cgatggagccaggcatctatcaagcactccttcacatactgcagaaaggctttcctctgt 877 Query: 491 ctttaagtgttcatggatgaaatcgaccagctgttggctcgacatgcagtcccaaatgcc 550 |||| |||||| |||||||||| |||| ||| ||||| |||||||||||||||||||| Sbjct: 876 gtttatatgttcacggatgaaatcaaccaactgctggcttgacatgcagtcccaaatgcc 817 Query: 551 atcacatgctaaaacaagaaaatcatcatcatcacaaagctcgacagtgtttacgtcagg 610 ||||||||||||||||| || || || || ||||| ||||||||| |||||| |||||| Sbjct: 816 atcacatgctaaaacaatgaattcgtcgtcgtcacatagctcgacaatgtttatgtcagg 757 Query: 611 gtttgctgtcaacatttgcttatcag 636 |||||| ||||| ||||||||||||| Sbjct: 756 gtttgcggtcaaaatttgcttatcag 731
>dbj|AK120711.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001L10, full insert sequence Length = 1818 Score = 222 bits (112), Expect = 1e-54 Identities = 160/176 (90%) Strand = Plus / Minus Query: 368 aattggcttcttgaactgcacaaggatcatcgtcatgttgtcgcatccttctccacctaa 427 ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| || Sbjct: 1410 aattggcttcttgaactgcactaggatcattgtcatgttgtcgcatccttctccacccaa 1351 Query: 428 tgttgatggagccaggcatctatcgagcaccttttcacacactgcagaaaggctactctc 487 ||||||||||||||||||||||| ||||| |||| || || ||||||||||| ||||| Sbjct: 1350 agttgatggagccaggcatctatctagcactctttcgcataccgcagaaaggctgctctc 1291 Query: 488 tgtctttaagtgttcatggatgaaatcgaccagctgttggctcgacatgcagtccc 543 ||| |||| |||||| ||||||||||| |||||||||||||| ||||||||||||| Sbjct: 1290 tgtgtttatgtgttcgtggatgaaatcaaccagctgttggctagacatgcagtccc 1235 Score = 125 bits (63), Expect = 2e-25 Identities = 84/91 (92%) Strand = Plus / Minus Query: 546 atgccatcacatgctaaaacaagaaaatcatcatcatcacaaagctcgacagtgtttacg 605 |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| | | Sbjct: 1089 atgccatcacatgctaaaacaagaaagtcatcatcatcacaaagctccactgtgttgatg 1030 Query: 606 tcagggtttgctgtcaacatttgcttatcag 636 ||||||||||| || |||||||||||||||| Sbjct: 1029 tcagggtttgcagttaacatttgcttatcag 999
>dbj|AK120521.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124L22, full insert sequence Length = 2052 Score = 196 bits (99), Expect = 6e-47 Identities = 219/259 (84%) Strand = Plus / Minus Query: 378 ttgaactgcacaaggatcatcgtcatgttgtcgcatccttctccacctaatgttgatgga 437 ||||||||||| || | ||| ||||||||||| ||||| |||||||| | |||||||||| Sbjct: 1327 ttgaactgcaccagaaccatggtcatgttgtcacatccctctccaccaattgttgatgga 1268 Query: 438 gccaggcatctatcgagcaccttttcacacactgcagaaaggctactctctgtctttaag 497 || |||||||| |||||||| |||| |||||||||||||| || ||||| ||| || Sbjct: 1267 gctaggcatctgtcgagcactctttcgcacactgcagaaagactgctctccttctgtata 1208 Query: 498 tgttcatggatgaaatcgaccagctgttggctcgacatgcagtcccaaatgccatcacat 557 || || ||||||||||| |||||||||||||| |||||||||||||||||||| |||||| Sbjct: 1207 tgctcgtggatgaaatccaccagctgttggcttgacatgcagtcccaaatgccgtcacat 1148 Query: 558 gctaaaacaagaaaatcatcatcatcacaaagctcgacagtgtttacgtcagggtttgct 617 |||||||||||||| || || || || |||||||| ||| ||| | |||||| ||||| Sbjct: 1147 gctaaaacaagaaagtcgtcgtcgtcgcaaagctcaacaacgttgatgtcaggatttgca 1088 Query: 618 gtcaacatttgcttatcag 636 |||| |||||||| |||| Sbjct: 1087 gtcacgatttgcttctcag 1069
>gb|AY104016.1| Zea mays PCO109282 mRNA sequence Length = 1486 Score = 159 bits (80), Expect = 1e-35 Identities = 221/268 (82%) Strand = Plus / Minus Query: 367 caattggcttcttgaactgcacaaggatcatcgtcatgttgtcgcatccttctccaccta 426 |||| ||||||||||||||||| ||||||||||||||||| |||||||| || || || | Sbjct: 1157 caatcggcttcttgaactgcaccaggatcatcgtcatgttatcgcatccctcgccgccca 1098 Query: 427 atgttgatggagccaggcatctatcgagcaccttttcacacactgcagaaaggctactct 486 || || ||||||||||||||||||||||| | || || ||||| || ||||| || Sbjct: 1097 tggtcgacggagccaggcatctatcgagcactctctcgcatactgccgagaggctttcct 1038 Query: 487 ctgtctttaagtgttcatggatgaaatcgaccagctgttggctcgacatgcagtcccaaa 546 |||| | || || || ||||||||||||||| ||| ||||| |||||||||||||| | Sbjct: 1037 ctgtgtctatatgctcgcggatgaaatcgaccaactgctggcttgacatgcagtcccaga 978 Query: 547 tgccatcacatgctaaaacaagaaaatcatcatcatcacaaagctcgacagtgtttacgt 606 ||||||| ||||| ||||||| || || || |||||||| ||||||||| |||||| || Sbjct: 977 tgccatcgcatgccaaaacaatgaattcgtcgtcatcacatagctcgacaatgtttatgt 918 Query: 607 cagggtttgctgtcaacatttgcttatc 634 | ||||| || |||| ||||||||||| Sbjct: 917 cggggttcgcagtcaggatttgcttatc 890
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 151 bits (76), Expect = 3e-33 Identities = 109/120 (90%) Strand = Plus / Plus Query: 368 aattggcttcttgaactgcacaaggatcatcgtcatgttgtcgcatccttctccacctaa 427 ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| || Sbjct: 26282024 aattggcttcttgaactgcactaggatcattgtcatgttgtcgcatccttctccacccaa 26282083 Query: 428 tgttgatggagccaggcatctatcgagcaccttttcacacactgcagaaaggctactctc 487 ||||||||||||||||||||||| ||||| |||| || || ||||||||||| ||||| Sbjct: 26282084 agttgatggagccaggcatctatctagcactctttcgcataccgcagaaaggctgctctc 26282143 Score = 85.7 bits (43), Expect = 2e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 546 atgccatcacatgctaaaacaagaaaatcatcatcatcacaaagctc 592 |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 26282433 atgccatcacatgctaaaacaagaaagtcatcatcatcacaaagctc 26282479 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 481 tactctctgtctttaagtgttcatggatgaaatcgaccagctgttggctcgacatgcagt 540 ||||| |||| |||| |||||| ||||||||||| |||||||||||||| |||||||||| Sbjct: 26282225 tactcactgtgtttatgtgttcgtggatgaaatcaaccagctgttggctagacatgcagt 26282284 Query: 541 ccc 543 ||| Sbjct: 26282285 ccc 26282287 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Plus Query: 605 gtcagggtttgctgtcaacatttgcttatcag 636 |||||||||||| || |||||||||||||||| Sbjct: 26282596 gtcagggtttgcagttaacatttgcttatcag 26282627 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 114 aaaaatgatgacaacaacagag 135 |||||||||||||||||||||| Sbjct: 25018284 aaaaatgatgacaacaacagag 25018263
>dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0453H04 Length = 175047 Score = 151 bits (76), Expect = 3e-33 Identities = 109/120 (90%) Strand = Plus / Plus Query: 368 aattggcttcttgaactgcacaaggatcatcgtcatgttgtcgcatccttctccacctaa 427 ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| || Sbjct: 146564 aattggcttcttgaactgcactaggatcattgtcatgttgtcgcatccttctccacccaa 146623 Query: 428 tgttgatggagccaggcatctatcgagcaccttttcacacactgcagaaaggctactctc 487 ||||||||||||||||||||||| ||||| |||| || || ||||||||||| ||||| Sbjct: 146624 agttgatggagccaggcatctatctagcactctttcgcataccgcagaaaggctgctctc 146683 Score = 85.7 bits (43), Expect = 2e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 546 atgccatcacatgctaaaacaagaaaatcatcatcatcacaaagctc 592 |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 146973 atgccatcacatgctaaaacaagaaagtcatcatcatcacaaagctc 147019 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 481 tactctctgtctttaagtgttcatggatgaaatcgaccagctgttggctcgacatgcagt 540 ||||| |||| |||| |||||| ||||||||||| |||||||||||||| |||||||||| Sbjct: 146765 tactcactgtgtttatgtgttcgtggatgaaatcaaccagctgttggctagacatgcagt 146824 Query: 541 ccc 543 ||| Sbjct: 146825 ccc 146827 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Plus Query: 605 gtcagggtttgctgtcaacatttgcttatcag 636 |||||||||||| || |||||||||||||||| Sbjct: 147136 gtcagggtttgcagttaacatttgcttatcag 147167
>gb|BT009488.1| Triticum aestivum clone wr1.pk0058.g3:fis, full insert mRNA sequence Length = 1768 Score = 131 bits (66), Expect = 3e-27 Identities = 99/110 (90%) Strand = Plus / Minus Query: 378 ttgaactgcacaaggatcatcgtcatgttgtcgcatccttctccacctaatgttgatgga 437 ||||||||||| | |||||| ||||||||||||||||| ||||| || | |||||||||| Sbjct: 580 ttgaactgcaccaagatcatggtcatgttgtcgcatccgtctccgcccattgttgatgga 521 Query: 438 gccaggcatctatcgagcaccttttcacacactgcagaaaggctactctc 487 ||||||||||| |||||||| |||||||||||||||||||||| ||||| Sbjct: 520 gccaggcatctgtcgagcactctttcacacactgcagaaaggctgctctc 471 Score = 111 bits (56), Expect = 3e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 501 tcatggatgaaatcgaccagctgttggctcgacatgcagtcccaaatgccatcacatgct 560 |||||||||||||| |||| ||| ||||| ||||| |||||||||||||||||||||||| Sbjct: 289 tcatggatgaaatccaccaactgctggcttgacatacagtcccaaatgccatcacatgct 230 Query: 561 aaaacaagaaaatcatcatcatcacaaagctc 592 ||||||||||| ||||| |||| |||||||| Sbjct: 229 aaaacaagaaagtcatcctcattgcaaagctc 198
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 103 bits (52), Expect = 7e-19 Identities = 100/116 (86%) Strand = Plus / Minus Query: 372 ggcttcttgaactgcacaaggatcatcgtcatgttgtcgcatccttctccacctaatgtt 431 ||||| ||||||||||| || | ||| ||||||||||| ||||| |||||||| | |||| Sbjct: 4453948 ggctttttgaactgcaccagaaccatggtcatgttgtcacatccctctccaccaattgtt 4453889 Query: 432 gatggagccaggcatctatcgagcaccttttcacacactgcagaaaggctactctc 487 |||||||| |||||||| |||||||| |||| |||||||||||||| || ||||| Sbjct: 4453888 gatggagctaggcatctgtcgagcactctttcgcacactgcagaaagactgctctc 4453833 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 504 tggatgaaatcgaccagctgttggctcgacatgcagtccc 543 ||||||||||| |||||||||||||| ||||||||||||| Sbjct: 4453711 tggatgaaatccaccagctgttggcttgacatgcagtccc 4453672 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 542 ccaaatgccatcacatgctaaaacaagaaaatcatcatcatcacaaagctc 592 ||||||||| |||||||||||||||||||| || || || || |||||||| Sbjct: 4453495 ccaaatgccgtcacatgctaaaacaagaaagtcgtcgtcgtcgcaaagctc 4453445
>dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0544B02 Length = 156339 Score = 103 bits (52), Expect = 7e-19 Identities = 100/116 (86%) Strand = Plus / Minus Query: 372 ggcttcttgaactgcacaaggatcatcgtcatgttgtcgcatccttctccacctaatgtt 431 ||||| ||||||||||| || | ||| ||||||||||| ||||| |||||||| | |||| Sbjct: 137512 ggctttttgaactgcaccagaaccatggtcatgttgtcacatccctctccaccaattgtt 137453 Query: 432 gatggagccaggcatctatcgagcaccttttcacacactgcagaaaggctactctc 487 |||||||| |||||||| |||||||| |||| |||||||||||||| || ||||| Sbjct: 137452 gatggagctaggcatctgtcgagcactctttcgcacactgcagaaagactgctctc 137397 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 504 tggatgaaatcgaccagctgttggctcgacatgcagtccc 543 ||||||||||| |||||||||||||| ||||||||||||| Sbjct: 137275 tggatgaaatccaccagctgttggcttgacatgcagtccc 137236 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 542 ccaaatgccatcacatgctaaaacaagaaaatcatcatcatcacaaagctc 592 ||||||||| |||||||||||||||||||| || || || || |||||||| Sbjct: 137059 ccaaatgccgtcacatgctaaaacaagaaagtcgtcgtcgtcgcaaagctc 137009
>ref|NM_119336.2| Arabidopsis thaliana catalytic/ protein phosphatase type 2C AT4G31860 transcript variant AT4G31860.1 mRNA, complete cds Length = 2023 Score = 81.8 bits (41), Expect = 3e-12 Identities = 167/209 (79%) Strand = Plus / Minus Query: 393 atcatcgtcatgttgtcgcatccttctccacctaatgttgatggagccaggcatctatcg 452 ||||| |||||||| || || ||||| |||||| | || ||||||||| ||||||||| Sbjct: 1185 atcatggtcatgttatcacagccttcaccacctgaagtgtttggagccagacatctatcg 1126 Query: 453 agcaccttttcacacactgcagaaaggctactctctgtctttaagtgttcatggatgaaa 512 || || |||||||| || | || || | |||||| || || |||||||| |||||| Sbjct: 1125 agaactttttcacataccaccgagagtttggtctctgaattcaattgttcatgtatgaaa 1066 Query: 513 tcgaccagctgttggctcgacatgcagtcccaaatgccatcacatgctaaaacaagaaaa 572 || || || |||||||| | |||||| |||||||| ||||| || || | |||||| ||| Sbjct: 1065 tcaacgagttgttggcttgtcatgcaatcccaaattccatcgcaggcaagaacaaggaaa 1006 Query: 573 tcatcatcatcacaaagctcgacagtgtt 601 |||||||||||||| || || |||||||| Sbjct: 1005 tcatcatcatcacagagttcaacagtgtt 977
>gb|AY113024.1| Arabidopsis thaliana AT4g31860/F11C18_60 mRNA, complete cds Length = 1074 Score = 81.8 bits (41), Expect = 3e-12 Identities = 167/209 (79%) Strand = Plus / Minus Query: 393 atcatcgtcatgttgtcgcatccttctccacctaatgttgatggagccaggcatctatcg 452 ||||| |||||||| || || ||||| |||||| | || ||||||||| ||||||||| Sbjct: 974 atcatggtcatgttatcacagccttcaccacctgaagtgtttggagccagacatctatcg 915 Query: 453 agcaccttttcacacactgcagaaaggctactctctgtctttaagtgttcatggatgaaa 512 || || |||||||| || | || || | |||||| || || |||||||| |||||| Sbjct: 914 agaactttttcacataccaccgagagtttggtctctgaattcaattgttcatgtatgaaa 855 Query: 513 tcgaccagctgttggctcgacatgcagtcccaaatgccatcacatgctaaaacaagaaaa 572 || || || |||||||| | |||||| |||||||| ||||| || || | |||||| ||| Sbjct: 854 tcaacgagttgttggcttgtcatgcaatcccaaattccatcgcaggcaagaacaaggaaa 795 Query: 573 tcatcatcatcacaaagctcgacagtgtt 601 |||||||||||||| || || |||||||| Sbjct: 794 tcatcatcatcacagagttcaacagtgtt 766
>gb|AY057611.1| Arabidopsis thaliana AT4g31860/F11C18_60 mRNA, complete cds Length = 1531 Score = 81.8 bits (41), Expect = 3e-12 Identities = 167/209 (79%) Strand = Plus / Minus Query: 393 atcatcgtcatgttgtcgcatccttctccacctaatgttgatggagccaggcatctatcg 452 ||||| |||||||| || || ||||| |||||| | || ||||||||| ||||||||| Sbjct: 1185 atcatggtcatgttatcacagccttcaccacctgaagtgtttggagccagacatctatcg 1126 Query: 453 agcaccttttcacacactgcagaaaggctactctctgtctttaagtgttcatggatgaaa 512 || || |||||||| || | || || | |||||| || || |||||||| |||||| Sbjct: 1125 agaactttttcacataccaccgagagtttggtctctgaattcaattgttcatgtatgaaa 1066 Query: 513 tcgaccagctgttggctcgacatgcagtcccaaatgccatcacatgctaaaacaagaaaa 572 || || || |||||||| | |||||| |||||||| ||||| || || | |||||| ||| Sbjct: 1065 tcaacgagttgttggcttgtcatgcaatcccaaattccatcgcaggcaagaacaaggaaa 1006 Query: 573 tcatcatcatcacaaagctcgacagtgtt 601 |||||||||||||| || || |||||||| Sbjct: 1005 tcatcatcatcacagagttcaacagtgtt 977
>emb|BX829262.1|CNS0A3DZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL84ZH11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 522 Score = 81.8 bits (41), Expect = 3e-12 Identities = 167/209 (79%) Strand = Plus / Minus Query: 393 atcatcgtcatgttgtcgcatccttctccacctaatgttgatggagccaggcatctatcg 452 ||||| |||||||| || || ||||| |||||| | || ||||||||| ||||||||| Sbjct: 314 atcatggtcatgttatcacagccttcaccacctgaagtgtttggagccagacatctatcg 255 Query: 453 agcaccttttcacacactgcagaaaggctactctctgtctttaagtgttcatggatgaaa 512 || || |||||||| || | || || | |||||| || || |||||||| |||||| Sbjct: 254 agaactttttcacataccaccgagagtttggtctctgaattcaattgttcatgtatgaaa 195 Query: 513 tcgaccagctgttggctcgacatgcagtcccaaatgccatcacatgctaaaacaagaaaa 572 || || || |||||||| | |||||| |||||||| ||||| || || | |||||| ||| Sbjct: 194 tcaacgagttgttggcttgtcatgcaatcccaaattccatcgcaggcaagaacaaggaaa 135 Query: 573 tcatcatcatcacaaagctcgacagtgtt 601 |||||||||||||| || || |||||||| Sbjct: 134 tcatcatcatcacagagttcaacagtgtt 106
>emb|BX826396.1|CNS0A41V Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB21ZB07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1469 Score = 58.0 bits (29), Expect = 4e-05 Identities = 98/121 (80%) Strand = Plus / Minus Query: 484 tctctgtctttaagtgttcatggatgaaatcgaccagctgttggctcgacatgcagtccc 543 ||||||| || || |||||||| ||| ||| || || |||||||| | ||||| |||| Sbjct: 1051 tctctgtattcaattgttcatgtttgatatcaacgagttgttggcttgtcatgctatccc 992 Query: 544 aaatgccatcacatgctaaaacaagaaaatcatcatcatcacaaagctcgacagtgttta 603 |||| ||||| || || | |||||| |||||||||||||||| || || |||||||||| Sbjct: 991 aaattccatcgcaggcaagaacaaggtaatcatcatcatcacagagttcaacagtgttta 932 Query: 604 c 604 | Sbjct: 931 c 931
>ref|NM_128064.2| Arabidopsis thaliana catalytic/ protein phosphatase type 2C/ protein serine/threonine phosphatase AT2G25070 mRNA, complete cds Length = 1517 Score = 56.0 bits (28), Expect = 1e-04 Identities = 91/112 (81%) Strand = Plus / Minus Query: 492 tttaagtgttcatggatgaaatcgaccagctgttggctcgacatgcagtcccaaatgcca 551 ||||| ||||||||||| ||||| || || | ||||| ||||| || ||||| || ||| Sbjct: 1047 tttaactgttcatggataaaatcaactagttcctggcttgacatacaatcccatattcca 988 Query: 552 tcacatgctaaaacaagaaaatcatcatcatcacaaagctcgacagtgttta 603 || || || | ||||||||| |||||||||||||| || || | |||||||| Sbjct: 987 tcgcaagcaacaacaagaaagtcatcatcatcacataggtcaatagtgttta 936
>gb|AY091209.1| Arabidopsis thaliana putative protein phosphatase 2C (At2g25070) mRNA, complete cds Length = 1099 Score = 56.0 bits (28), Expect = 1e-04 Identities = 91/112 (81%) Strand = Plus / Minus Query: 492 tttaagtgttcatggatgaaatcgaccagctgttggctcgacatgcagtcccaaatgcca 551 ||||| ||||||||||| ||||| || || | ||||| ||||| || ||||| || ||| Sbjct: 875 tttaactgttcatggataaaatcaactagttcctggcttgacatacaatcccatattcca 816 Query: 552 tcacatgctaaaacaagaaaatcatcatcatcacaaagctcgacagtgttta 603 || || || | ||||||||| |||||||||||||| || || | |||||||| Sbjct: 815 tcgcaagcaacaacaagaaagtcatcatcatcacataggtcaatagtgttta 764
>gb|AY050873.1| Arabidopsis thaliana putative protein phosphatase 2C (At2g25070) mRNA, complete cds Length = 1522 Score = 56.0 bits (28), Expect = 1e-04 Identities = 91/112 (81%) Strand = Plus / Minus Query: 492 tttaagtgttcatggatgaaatcgaccagctgttggctcgacatgcagtcccaaatgcca 551 ||||| ||||||||||| ||||| || || | ||||| ||||| || ||||| || ||| Sbjct: 1035 tttaactgttcatggataaaatcaactagttcctggcttgacatacaatcccatattcca 976 Query: 552 tcacatgctaaaacaagaaaatcatcatcatcacaaagctcgacagtgttta 603 || || || | ||||||||| |||||||||||||| || || | |||||||| Sbjct: 975 tcgcaagcaacaacaagaaagtcatcatcatcacataggtcaatagtgttta 924
>gb|AY088966.1| Arabidopsis thaliana clone 11428 mRNA, complete sequence Length = 1458 Score = 56.0 bits (28), Expect = 1e-04 Identities = 91/112 (81%) Strand = Plus / Minus Query: 492 tttaagtgttcatggatgaaatcgaccagctgttggctcgacatgcagtcccaaatgcca 551 ||||| ||||||||||| ||||| || || | ||||| ||||| || ||||| || ||| Sbjct: 1045 tttaactgttcatggataaaatcaactagttcctggcttgacatacaatcccatattcca 986 Query: 552 tcacatgctaaaacaagaaaatcatcatcatcacaaagctcgacagtgttta 603 || || || | ||||||||| |||||||||||||| || || | |||||||| Sbjct: 985 tcgcaagcaacaacaagaaagtcatcatcatcacataggtcaatagtgttta 934
>dbj|AB079671.1| Arabidopsis thaliana AtPPC4;2 mRNA for protein phosphatase 2C, complete cds Length = 1463 Score = 56.0 bits (28), Expect = 1e-04 Identities = 91/112 (81%) Strand = Plus / Minus Query: 492 tttaagtgttcatggatgaaatcgaccagctgttggctcgacatgcagtcccaaatgcca 551 ||||| ||||||||||| ||||| || || | ||||| ||||| || ||||| || ||| Sbjct: 1017 tttaactgttcatggataaaatcaactagttcctggcttgacatacaatcccatattcca 958 Query: 552 tcacatgctaaaacaagaaaatcatcatcatcacaaagctcgacagtgttta 603 || || || | ||||||||| |||||||||||||| || || | |||||||| Sbjct: 957 tcgcaagcaacaacaagaaagtcatcatcatcacataggtcaatagtgttta 906
>dbj|AK111778.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081L07, full insert sequence Length = 1572 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 531 gacatgcagtcccaaatgccatcacatgctaaaac 565 |||||||| ||||| |||||||||||||||||||| Sbjct: 1081 gacatgcaatcccatatgccatcacatgctaaaac 1047
>gb|AY692754.1| Saccharomyces cerevisiae clone FLH158229.01X YBL056W gene, complete cds Length = 1407 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 540 tcccaaatgccatcacatgctaaaacaagaaaatcatcatcatca 584 |||||||| |||||||||||||||| || ||| ||||| |||||| Sbjct: 713 tcccaaataccatcacatgctaaaataacaaattcatcctcatca 669
>emb|Z35817.1|SCYBL056W S.cerevisiae chromosome II reading frame ORF YBL056w Length = 2131 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 540 tcccaaatgccatcacatgctaaaacaagaaaatcatcatcatca 584 |||||||| |||||||||||||||| || ||| ||||| |||||| Sbjct: 1030 tcccaaataccatcacatgctaaaataacaaattcatcctcatca 986
>emb|Z23261.1|SCIIL26O S.cerevisiae DNA for open reading frames YBL0501, YBL0505/sec17p, YBL0506, YBL0507, YBL0509, YBL0511, YBL0513, YBL0514, YBL0515, YBL0516, YBL0517, YBL0519, YBL0521/KIP1, YBL0524, YBL0526 Length = 32560 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 540 tcccaaatgccatcacatgctaaaacaagaaaatcatcatcatca 584 |||||||| |||||||||||||||| || ||| ||||| |||||| Sbjct: 16726 tcccaaataccatcacatgctaaaataacaaattcatcctcatca 16682
>gb|U72346.1|SCU72346 Saccharomyces cerevisiae protein phosphatase type 2C (PTC3), complete cds Length = 2686 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 540 tcccaaatgccatcacatgctaaaacaagaaaatcatcatcatca 584 |||||||| |||||||||||||||| || ||| ||||| |||||| Sbjct: 1341 tcccaaataccatcacatgctaaaataacaaattcatcctcatca 1297
>ref|NM_202927.1| Arabidopsis thaliana catalytic/ protein phosphatase type 2C AT4G31860 transcript variant AT4G31860.2 mRNA, complete cds Length = 2108 Score = 48.1 bits (24), Expect = 0.036 Identities = 51/60 (85%) Strand = Plus / Minus Query: 542 ccaaatgccatcacatgctaaaacaagaaaatcatcatcatcacaaagctcgacagtgtt 601 |||||| ||||| || || | |||||| ||||||||||||||||| || || |||||||| Sbjct: 1036 ccaaattccatcgcaggcaagaacaaggaaatcatcatcatcacagagttcaacagtgtt 977 Score = 44.1 bits (22), Expect = 0.56 Identities = 61/74 (82%) Strand = Plus / Minus Query: 393 atcatcgtcatgttgtcgcatccttctccacctaatgttgatggagccaggcatctatcg 452 ||||| |||||||| || || ||||| |||||| | || ||||||||| ||||||||| Sbjct: 1270 atcatggtcatgttatcacagccttcaccacctgaagtgtttggagccagacatctatcg 1211 Query: 453 agcaccttttcaca 466 || || |||||||| Sbjct: 1210 agaactttttcaca 1197
>ref|XM_460254.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0E23166g) partial mRNA Length = 1020 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 540 tcccaaatgccatcacatgctaaaacaa 567 |||||||| ||||||||||||||||||| Sbjct: 782 tcccaaattccatcacatgctaaaacaa 755
>ref|XM_645638.1| Entamoeba histolytica HM-1:IMSS protein phosphatase (202.t00013) partial mRNA Length = 1008 Score = 48.1 bits (24), Expect = 0.036 Identities = 36/40 (90%) Strand = Plus / Minus Query: 540 tcccaaatgccatcacatgctaaaacaagaaaatcatcat 579 |||||||| ||||||||||| |||||||| ||||| |||| Sbjct: 791 tcccaaataccatcacatgccaaaacaaggaaatcttcat 752
>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces hansenii Length = 2037969 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 540 tcccaaatgccatcacatgctaaaacaa 567 |||||||| ||||||||||||||||||| Sbjct: 1812651 tcccaaattccatcacatgctaaaacaa 1812624
>emb|BX827528.1|CNS0A3LW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS6ZG06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1408 Score = 48.1 bits (24), Expect = 0.036 Identities = 51/60 (85%) Strand = Plus / Minus Query: 542 ccaaatgccatcacatgctaaaacaagaaaatcatcatcatcacaaagctcgacagtgtt 601 |||||| ||||| || || | |||||| ||||||||||||||||| || || |||||||| Sbjct: 996 ccaaattccatcgcaggcaagaacaaggaaatcatcatcatcacagagttcaacagtgtt 937 Score = 44.1 bits (22), Expect = 0.56 Identities = 61/74 (82%) Strand = Plus / Minus Query: 393 atcatcgtcatgttgtcgcatccttctccacctaatgttgatggagccaggcatctatcg 452 ||||| |||||||| || || ||||| |||||| | || ||||||||| ||||||||| Sbjct: 1230 atcatggtcatgttatcacagccttcaccacctgaagtgtttggagccagacatctatcg 1171 Query: 453 agcaccttttcaca 466 || || |||||||| Sbjct: 1170 agaactttttcaca 1157
>dbj|AB026112.1| Entamoeba histolytica EhPP2C gene for protein phosphatase 2C, complete cds Length = 1380 Score = 48.1 bits (24), Expect = 0.036 Identities = 36/40 (90%) Strand = Plus / Minus Query: 540 tcccaaatgccatcacatgctaaaacaagaaaatcatcat 579 |||||||| ||||||||||| |||||||| ||||| |||| Sbjct: 1086 tcccaaataccatcacatgccaaaacaaggaaatcttcat 1047
>gb|AY673960.1| Lactobacillus paracasei subsp. paracasei Contig 4, complete sequence Length = 2899 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 324 tccacagccaatttttcaccagc 346 ||||||||||||||||||||||| Sbjct: 2392 tccacagccaatttttcaccagc 2370
>gb|AC143339.12| Medicago truncatula clone mth2-20g20, complete sequence Length = 99993 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Plus Query: 378 ttgaactgcacaaggatcatcgtcatgttgtcgcatcc 415 ||||||||||| | |||||| |||||||| |||||||| Sbjct: 67100 ttgaactgcaccaagatcattgtcatgttatcgcatcc 67137
>emb|AL023913.6|HS1068F16 Human DNA sequence from clone RP5-1068F16 on chromosome 20p12 Contains the 3' end of the SNAP25 gene for 25kDa synaptosomal-associated protein, the RPL23AP6 gene for ribosomal protein L23a pseudogene 6, part of a novel gene and a hypoxia induced gene 1 (HIG1) pseudogene, complete sequence Length = 140306 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 124 acaacaacagagttgagtggaa 145 |||||||||||||||||||||| Sbjct: 43323 acaacaacagagttgagtggaa 43302
>emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 75 Length = 196242 Score = 44.1 bits (22), Expect = 0.56 Identities = 61/74 (82%) Strand = Plus / Plus Query: 393 atcatcgtcatgttgtcgcatccttctccacctaatgttgatggagccaggcatctatcg 452 ||||| |||||||| || || ||||| |||||| | || ||||||||| ||||||||| Sbjct: 172730 atcatggtcatgttatcacagccttcaccacctgaagtgtttggagccagacatctatcg 172789 Query: 453 agcaccttttcaca 466 || || |||||||| Sbjct: 172790 agaactttttcaca 172803 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 542 ccaaatgccatcacatgctaaaacaagaaaatcatcatcatcaca 586 |||||| ||||| || || | |||||| ||||||||||||||||| Sbjct: 173064 ccaaattccatcgcaggcaagaacaaggaaatcatcatcatcaca 173108
>emb|AL049607.1|ATF11C18 Arabidopsis thaliana DNA chromosome 4, BAC clone F11C18 (ESSA project) Length = 111517 Score = 44.1 bits (22), Expect = 0.56 Identities = 61/74 (82%) Strand = Plus / Plus Query: 393 atcatcgtcatgttgtcgcatccttctccacctaatgttgatggagccaggcatctatcg 452 ||||| |||||||| || || ||||| |||||| | || ||||||||| ||||||||| Sbjct: 33391 atcatggtcatgttatcacagccttcaccacctgaagtgtttggagccagacatctatcg 33450 Query: 453 agcaccttttcaca 466 || || |||||||| Sbjct: 33451 agaactttttcaca 33464 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 542 ccaaatgccatcacatgctaaaacaagaaaatcatcatcatcaca 586 |||||| ||||| || || | |||||| ||||||||||||||||| Sbjct: 33725 ccaaattccatcgcaggcaagaacaaggaaatcatcatcatcaca 33769
>dbj|AP004733.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0023I22 Length = 170029 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 114 aaaaatgatgacaacaacagag 135 |||||||||||||||||||||| Sbjct: 70617 aaaaatgatgacaacaacagag 70596
>dbj|AP003541.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0530H05 Length = 145952 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 114 aaaaatgatgacaacaacagag 135 |||||||||||||||||||||| Sbjct: 112839 aaaaatgatgacaacaacagag 112818
>gb|AY104507.1| Zea mays PCO148355 mRNA sequence Length = 1212 Score = 44.1 bits (22), Expect = 0.56 Identities = 37/42 (88%) Strand = Plus / Minus Query: 542 ccaaatgccatcacatgctaaaacaagaaaatcatcatcatc 583 |||||| |||||||| |||||||||| || ||||||||||| Sbjct: 619 ccaaattccatcacaagctaaaacaatgaattcatcatcatc 578
>ref|XM_638432.1| Dictyostelium discoideum hypothetical protein (DDB0191350), partial mRNA Length = 1350 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 560 taaaacaagaaaatcatcatcatca 584 |||||||| |||||||||||||||| Sbjct: 27 taaaacaacaaaatcatcatcatca 51
>gb|AC145810.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0059C14, complete sequence Length = 142138 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 310 tggcatccttatcctccacag 330 ||||||||||||||||||||| Sbjct: 96549 tggcatccttatcctccacag 96529
>gb|AC091094.2| Felis catus clone RP86-317G18, complete sequence Length = 134762 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 563 aacaagaaaatcatcatcatc 583 ||||||||||||||||||||| Sbjct: 119194 aacaagaaaatcatcatcatc 119174
>emb|CR352327.13| Zebrafish DNA sequence from clone CH211-194C22 in linkage group 8, complete sequence Length = 203325 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 561 aaaacaagaaaatcatcatca 581 ||||||||||||||||||||| Sbjct: 111180 aaaacaagaaaatcatcatca 111200
>ref|XM_381370.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01194.1) partial mRNA Length = 6468 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 337 tttcaccagcactggcatttttgcc 361 |||||||||||||||||| |||||| Sbjct: 3495 tttcaccagcactggcatgtttgcc 3519
>emb|BX901912.10| Zebrafish DNA sequence from clone CH211-212D2 in linkage group 1, complete sequence Length = 140289 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 455 caccttttcacacactgcaga 475 ||||||||||||||||||||| Sbjct: 63071 caccttttcacacactgcaga 63051
>gb|AY332722.1| Homo sapiens insulin-like growth factor 1 receptor (IGF1R) gene, complete cds Length = 309626 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 299 ttcaccagcactggcatcctt 319 ||||||||||||||||||||| Sbjct: 300184 ttcaccagcactggcatcctt 300164
>gb|AC155227.3| Rhinolophus ferrumequinum clone VMRC7-4K1, complete sequence Length = 160979 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 563 aacaagaaaatcatcatcatc 583 ||||||||||||||||||||| Sbjct: 129298 aacaagaaaatcatcatcatc 129278
>gb|AC092172.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0014J14, complete sequence Length = 191397 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 310 tggcatccttatcctccacag 330 ||||||||||||||||||||| Sbjct: 132436 tggcatccttatcctccacag 132456
>gb|AC069029.9| Homo sapiens chromosome 15, clone RP11-654A16, complete sequence Length = 191018 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 ttcaccagcactggcatcctt 319 ||||||||||||||||||||| Sbjct: 36447 ttcaccagcactggcatcctt 36467
>gb|AC009898.6| Homo sapiens chromosome 8, clone RP11-138H14, complete sequence Length = 168539 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 564 acaagaaaatcatcatcatca 584 ||||||||||||||||||||| Sbjct: 101894 acaagaaaatcatcatcatca 101914
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 310 tggcatccttatcctccacag 330 ||||||||||||||||||||| Sbjct: 8797778 tggcatccttatcctccacag 8797758
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 310 tggcatccttatcctccacag 330 ||||||||||||||||||||| Sbjct: 7307075 tggcatccttatcctccacag 7307095
>gb|AC148038.3| Ovis aries clone CH243-361I2, complete sequence Length = 198973 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 563 aacaagaaaatcatcatcatc 583 ||||||||||||||||||||| Sbjct: 36816 aacaagaaaatcatcatcatc 36796
>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold Length = 1756392 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 563 aacaagaaaatcatcatcatc 583 ||||||||||||||||||||| Sbjct: 1461966 aacaagaaaatcatcatcatc 1461946
>gb|AC105393.3| Homo sapiens BAC clone RP11-379N10 from 2, complete sequence Length = 121822 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 565 caagaaaatcatcatcatcac 585 ||||||||||||||||||||| Sbjct: 92314 caagaaaatcatcatcatcac 92294
>gb|AC115598.2| Dictyostelium discoideum chromosome 2 map 581427-735498 strain AX4, complete sequence Length = 154071 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 560 taaaacaagaaaatcatcatcatca 584 |||||||| |||||||||||||||| Sbjct: 105097 taaaacaacaaaatcatcatcatca 105121
>emb|BX004779.16| Zebrafish DNA sequence from clone CH211-14K19 in linkage group 1, complete sequence Length = 196036 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 455 caccttttcacacactgcaga 475 ||||||||||||||||||||| Sbjct: 8154 caccttttcacacactgcaga 8134
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 310 tggcatccttatcctccacag 330 ||||||||||||||||||||| Sbjct: 7310374 tggcatccttatcctccacag 7310394
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 310 tggcatccttatcctccacag 330 ||||||||||||||||||||| Sbjct: 8868541 tggcatccttatcctccacag 8868521
>gb|U83248.1|DDU83248 Dictyostelium discoideum GtpA (gtpA) mRNA, partial cds Length = 940 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 560 taaaacaagaaaatcatcatcatca 584 |||||||| |||||||||||||||| Sbjct: 147 taaaacaacaaaatcatcatcatca 171
>gb|AC099614.9| Mus musculus chromosome 15, clone RP23-408O11, complete sequence Length = 201092 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 ccttttcacacactgcagaa 476 |||||||||||||||||||| Sbjct: 74734 ccttttcacacactgcagaa 74715
>gb|DP000017.1| Sus scrofa target 1 genomic scaffold Length = 1471440 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 564 acaagaaaatcatcatcatc 583 |||||||||||||||||||| Sbjct: 1407733 acaagaaaatcatcatcatc 1407714
>gb|AC165118.3| Oryctolagus cuniculus, clone Oryctolagus cuniculus-16788057J9, complete sequence Length = 40531 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 actagaactggcactcttat 282 |||||||||||||||||||| Sbjct: 9407 actagaactggcactcttat 9426
>ref|XM_363425.1| Magnaporthe grisea 70-15 hypothetical protein (MG01351.4) partial mRNA Length = 1356 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 atcatcgtcatgttgtcgca 412 |||||||||||||||||||| Sbjct: 872 atcatcgtcatgttgtcgca 853
>gb|AC137592.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0035B22, complete sequence Length = 155788 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 atgccatcacatgctaaaac 565 |||||||||||||||||||| Sbjct: 78985 atgccatcacatgctaaaac 79004
>gb|AC092497.2| Sus scrofa clone RP44-30C22, complete sequence Length = 172144 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 564 acaagaaaatcatcatcatc 583 |||||||||||||||||||| Sbjct: 108437 acaagaaaatcatcatcatc 108418
>gb|AC146385.4| Pan troglodytes BAC clone RP43-126C6 from 7, complete sequence Length = 162268 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 480 ctactctctgtctttaagtgttca 503 |||||||||||||||||| ||||| Sbjct: 34386 ctactctctgtctttaagagttca 34409
>emb|CR753837.14| Zebrafish DNA sequence from clone DKEY-234K7 in linkage group 5, complete sequence Length = 135495 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 aaaatcatcatcatcacaaa 588 |||||||||||||||||||| Sbjct: 134496 aaaatcatcatcatcacaaa 134515
>gb|AC146213.2| Pan troglodytes BAC clone RP43-33O10 from 7, complete sequence Length = 187649 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 480 ctactctctgtctttaagtgttca 503 |||||||||||||||||| ||||| Sbjct: 101441 ctactctctgtctttaagagttca 101418
>emb|CR361557.15| Zebrafish DNA sequence from clone DKEY-78P8 in linkage group 13, complete sequence Length = 150816 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 572 atcatcatcatcacaaagct 591 |||||||||||||||||||| Sbjct: 42095 atcatcatcatcacaaagct 42114
>emb|CR753838.10| Zebrafish DNA sequence from clone DKEY-189H5 in linkage group 5, complete sequence Length = 188660 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 aaaatcatcatcatcacaaa 588 |||||||||||||||||||| Sbjct: 1001 aaaatcatcatcatcacaaa 1020
>gb|AC109460.3| Homo sapiens chromosome 16 clone RP11-264B17, complete sequence Length = 163424 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 565 caagaaaatcatcatcatca 584 |||||||||||||||||||| Sbjct: 125381 caagaaaatcatcatcatca 125362
>gb|U39646.1| Caenorhabditis elegans cosmid F47B7, complete sequence Length = 26590 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 aacgaggaaaaatgatgacaacaa 130 ||||| |||||||||||||||||| Sbjct: 5178 aacgatgaaaaatgatgacaacaa 5201
>gb|AC156606.12| Mus musculus chromosome 7, clone RP23-78N8, complete sequence Length = 200034 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 561 aaaacaagaaaatcatcatcatca 584 ||||||| |||||||||||||||| Sbjct: 138579 aaaacaaaaaaatcatcatcatca 138556
>emb|AL513492.10| Human DNA sequence from clone RP11-365P20 on chromosome 6, complete sequence Length = 113677 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 556 atgctaaaacaagaaaatca 575 |||||||||||||||||||| Sbjct: 703 atgctaaaacaagaaaatca 684
>emb|AL391500.13| Human DNA sequence from clone RP11-707M13 on chromosome 6 Contains a novel pseudogene and an ADH5 (alcohol dehydrogenase 5 (class III) chi polypeptide) pseudogene, complete sequence Length = 171220 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 556 atgctaaaacaagaaaatca 575 |||||||||||||||||||| Sbjct: 169923 atgctaaaacaagaaaatca 169904
>emb|AL162733.9| Human DNA sequence from clone RP11-397F23 on chromosome 9 Contains the 5'end of the protein tyrosine phosphatase (non-receptor type 3) gene, a novel pseudogene, apseudogene similar to mouse Ybox transcription factor and a CpG island, complete sequence Length = 189367 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 ttgttcaccagcactggcat 315 |||||||||||||||||||| Sbjct: 49887 ttgttcaccagcactggcat 49868
>gb|AC112166.3| Homo sapiens chromosome 16 clone CTB-134H23, complete sequence Length = 131839 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 565 caagaaaatcatcatcatca 584 |||||||||||||||||||| Sbjct: 107895 caagaaaatcatcatcatca 107914
>gb|AC006585.8| Arabidopsis thaliana chromosome 2 clone F27C12 map mi238, complete sequence Length = 103495 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 563 aacaagaaaatcatcatcatcaca 586 ||||||||| |||||||||||||| Sbjct: 3042 aacaagaaagtcatcatcatcaca 3019
>gb|AC008453.6| Homo sapiens chromosome 5 clone CTC-345K18, complete sequence Length = 145064 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 540 tcccaaatgccatcacatgctaaa 563 |||||||||||||| ||||||||| Sbjct: 125608 tcccaaatgccatcgcatgctaaa 125631
>gb|AC011383.6| Homo sapiens chromosome 5 clone CTB-140J7, complete sequence Length = 93407 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 540 tcccaaatgccatcacatgctaaa 563 |||||||||||||| ||||||||| Sbjct: 67098 tcccaaatgccatcgcatgctaaa 67075
>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold Length = 2136267 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 563 aacaagaaaatcatcatcat 582 |||||||||||||||||||| Sbjct: 1914891 aacaagaaaatcatcatcat 1914872
>ref|XM_623415.1| PREDICTED: Apis mellifera similar to CG17746-PA, isoform A (LOC551020), mRNA Length = 963 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 540 tcccaaatgccatcacatgctaaaacaa 567 |||||||| ||||||||||| ||||||| Sbjct: 707 tcccaaataccatcacatgccaaaacaa 680
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 atgccatcacatgctaaaac 565 |||||||||||||||||||| Sbjct: 21873551 atgccatcacatgctaaaac 21873570
>gb|AC130784.3| Atelerix albiventris clone LB4-112D1, complete sequence Length = 166122 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 563 aacaagaaaatcatcatcat 582 |||||||||||||||||||| Sbjct: 140901 aacaagaaaatcatcatcat 140882
>gb|AC073650.44| Homo sapiens 12 BAC RP11-44F24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 91200 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 571 aatcatcatcatcacaaagc 590 |||||||||||||||||||| Sbjct: 31871 aatcatcatcatcacaaagc 31852
>gb|AY144826.1| Saccharomyces bayanus clone Contig4098 GEA2 gene, partial cds Length = 2004 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 608 agggtttgctgtcaacatttgctt 631 ||||||| |||||||||||||||| Sbjct: 551 agggttttctgtcaacatttgctt 574
>dbj|AP005090.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1065_E04 Length = 115865 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 atgccatcacatgctaaaac 565 |||||||||||||||||||| Sbjct: 4268 atgccatcacatgctaaaac 4287
>emb|BX322606.6| Zebrafish DNA sequence from clone DKEY-40F12, complete sequence Length = 240928 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 aaaatcatcatcatcacaaa 588 |||||||||||||||||||| Sbjct: 90855 aaaatcatcatcatcacaaa 90874
>dbj|AP003101.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-30J7, complete sequences Length = 157959 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 gagtggaatagaaaaagaga 157 |||||||||||||||||||| Sbjct: 37076 gagtggaatagaaaaagaga 37057
>dbj|AP001189.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-672A2, complete sequence Length = 186389 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 gagtggaatagaaaaagaga 157 |||||||||||||||||||| Sbjct: 167175 gagtggaatagaaaaagaga 167156
>gb|AY689531.1| Uncultured beta proteobacterium clone BDC1_E08 16S ribosomal RNA gene, partial sequence Length = 748 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 catgcagtcccaaatgccat 552 |||||||||||||||||||| Sbjct: 57 catgcagtcccaaatgccat 38
>emb|AL132949.2|CEY53F4B Caenorhabditis elegans YAC Y53F4B, complete sequence Length = 227606 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 atagaaaaagagatgacaaa 164 |||||||||||||||||||| Sbjct: 8519 atagaaaaagagatgacaaa 8500 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,234,673 Number of Sequences: 3902068 Number of extensions: 6234673 Number of successful extensions: 128904 Number of sequences better than 10.0: 95 Number of HSP's better than 10.0 without gapping: 95 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 128354 Number of HSP's gapped (non-prelim): 548 length of query: 636 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 613 effective length of database: 17,143,297,704 effective search space: 10508841492552 effective search space used: 10508841492552 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)