ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags30n16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009629.1| Triticum aestivum clone wre1n.pk168.h11:fis, full... 1110 0.0
2dbj|AK060718.1| Oryza sativa (japonica cultivar-group) cDNA clon... 523 e-145
3dbj|AK120113.1| Oryza sativa (japonica cultivar-group) cDNA clon... 509 e-141
4gb|AY108579.1| Zea mays PCO102927 mRNA sequence 458 e-125
5gb|AY111909.1| Zea mays CL491_-2 mRNA sequence 258 2e-65
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 143 8e-31
7gb|AC146619.1| Genomic sequence for Oryza sativa, Nipponbare str... 143 8e-31
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 143 8e-31
9gb|AF297643.1|AF297643 Cucumis melo mitochondrial processing pep... 105 2e-19
10gb|AF363285.1|AF363285 Avicennia marina mitochondrial processing... 88 4e-14
11ref|NM_111075.2| Arabidopsis thaliana MPPBETA; metalloendopeptid... 74 6e-10
12ref|NM_180169.1| Arabidopsis thaliana MPPBETA; metalloendopeptid... 74 6e-10
13gb|BT000830.1| Arabidopsis thaliana putative mitochondrial proce... 74 6e-10
14gb|BT000662.1| Arabidopsis thaliana clone RAFL07-09-O22 (R10705)... 74 6e-10
15gb|AY057579.1| Arabidopsis thaliana At3g02090 mRNA sequence 74 6e-10
16gb|AY126990.1| Arabidopsis thaliana AT3g02090/F1C9_12 mRNA, comp... 74 6e-10
17emb|BX823363.1|CNS0A4RL Arabidopsis thaliana Full-length cDNA Co... 74 6e-10
18gb|BT001915.1| Arabidopsis thaliana clone C105149 putative mitoc... 74 6e-10
19emb|BX825296.1|CNS0A4ZN Arabidopsis thaliana Full-length cDNA Co... 70 1e-08
20emb|X80237.1|STBIMPP S.tuberosum mRNA for beta-I MPP 68 4e-08
21gb|BT013728.1| Lycopersicon esculentum clone 132587R, mRNA sequence 64 6e-07
22gb|DQ284488.1| Solanum tuberosum clone 028E08 mitochondrial proc... 62 2e-06
23gb|AC011664.10|ATAC011664 Arabidopsis thaliana chromosome III BA... 54 6e-04
24emb|X80235.1|STBIIMPP S.tuberosum mRNA for beta-II MPP 54 6e-04
25gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome 44 0.58
26emb|AJ538971.1|NTA538971 Nicotiana tabacum cDNA-AFLP-fragment BT... 44 0.58
27gb|AC134460.4| Mus musculus BAC clone RP23-373D18 from chromosom... 42 2.3
28emb|CR450809.6| Zebrafish DNA sequence from clone CH211-195I6 in... 42 2.3
29ref|XM_678031.1| PREDICTED: Danio rerio similar to retinal-speci... 42 2.3
30gb|AC105061.16| Mus musculus chromosome 19, clone RP23-117I10, c... 42 2.3
31gb|AC153883.6| Mus musculus 10 BAC RP23-368G20 (Roswell Park Can... 42 2.3
32gb|AC153533.4| Mus musculus 10 BAC RP23-474K10 (Roswell Park Can... 42 2.3
33gb|AC154426.2| Mus musculus BAC clone RP24-199A21 from chromosom... 40 9.0
34gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 40 9.0
35gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 40 9.0
36ref|XM_611761.2| PREDICTED: Bos taurus similar to CG2747-PB, iso... 40 9.0
37ref|XM_879730.1| PREDICTED: Bos taurus similar to CG2747-PB, iso... 40 9.0
38gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 40 9.0
39ref|NG_000008.6| Homo sapiens cytochrome P450, family 2, subfami... 40 9.0
40gb|AY810036.1| Schistosoma japonicum SJCHGC05583 protein mRNA, p... 40 9.0
41gb|AC146174.2| Pan troglodytes BAC clone CH251-549F12 from Y, co... 40 9.0
42gb|CP000001.1| Bacillus cereus E33L, complete genome 40 9.0
43emb|AL590995.14| Human DNA sequence from clone RP11-475B22 on ch... 40 9.0
44emb|AL353150.25| Human DNA sequence from clone RP11-82L18 on chr... 40 9.0
45emb|AL121911.15|HSDJ989D7 Human DNA sequence from clone RP5-989D... 40 9.0
46emb|AL050344.31|HSJ799D16 Human DNA sequence from clone RP4-799D... 40 9.0
47emb|X72832.1|SEDEXB S.equisimilis dexb, abc, lrp, skc, rel genes... 40 9.0
48gb|AC078925.18| Homo sapiens 12q BAC RP11-76C10 (Roswell Park Ca... 40 9.0
49dbj|BS000614.1| Pan troglodytes chromosome Y clone:PTBY-009K01, ... 40 9.0
50dbj|BS000556.1| Pan troglodytes chromosome Y clone:PTB-461C11, c... 40 9.0
51gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 9.0
52gb|AC153895.5| Mus musculus 6 BAC RP23-114F22 (Roswell Park Canc... 40 9.0
53dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
54gb|AC008537.5|AC008537 Homo sapiens chromosome 19 clone CTC-490E... 40 9.0
55gb|AC006040.3|AC006040 Homo sapiens BAC clone RP11-400O10 from Y... 40 9.0
56gb|AC153618.4| Mus musculus 6 BAC RP23-5O1 (Roswell Park Cancer ... 40 9.0
57dbj|AK068475.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.0
58emb|CT009515.16| Mouse DNA sequence from clone RP23-117H6 on chr... 40 9.0
59gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 40 9.0
60gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 40 9.0
61gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome 40 9.0
62gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.0
63emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa... 40 9.0
64gb|AF041427.1|AF041427 Homo sapiens ribosomal protein s4 Y isofo... 40 9.0 
>gb|BT009629.1| Triticum aestivum clone wre1n.pk168.h11:fis, full insert mRNA
            sequence
          Length = 1391

 Score = 1110 bits (560), Expect = 0.0
 Identities = 638/661 (96%), Gaps = 6/661 (0%)
 Strand = Plus / Minus

                                                                        
Query: 6    cacgtcagtcgaatttgcctacc-ttattgacagctttgtgggtttgcaaaaggaagaca 64
            |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 1214 cacgtcagtcaaatttgcctaccattattgacagctttgtgggtttgcaaaaggaagaga 1155

                                                                        
Query: 65   ggggcaaggaaaacgaagactcaaaaaattcctccacttcggcacataatatgtgcgtgg 124
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1154 agggcaaggaaaacgaagactcaaaaaattcctccacttcggcacataatatgtgcgtgg 1095

                                                                        
Query: 125  atgtggccttataatatactgatgccaaaacaagcaatcatcttgcctttgcagactgta 184
            |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1094 atgtggcctta--atatactgatgccaaaacaagcaatcatcttgcctttgcagactgta 1037

                                                                        
Query: 185  aacatggtacactgctggttgaatc---tagtaacggagcatgtaggtcctgcgtctgaa 241
            |||||||||||| |||||| |||||   ||||||||||||||||||||||||||||||||
Sbjct: 1036 aacatggtacaccgctggtcgaatcatctagtaacggagcatgtaggtcctgcgtctgaa 977

                                                                        
Query: 242  ccagttgtagtctggaagagtcttaattggtcccatggcagcgatggcaatatcctggtc 301
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 976  ccagttgtagtctggaagagacttaattggtcccatggcagcgatggcaatatcctggtc 917

                                                                        
Query: 302  aaagatgaagcggtttgcaacacgcctgatagtgctgggatcaactgcatctattctcgc 361
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 916  aaagatgaagcggtttgcaacacgcctgatagtgctcggatcaactgcatctattctcgc 857

                                                                        
Query: 362  aaaaagctcgggaataggaattctacggccatagatgagttgctgacgtccaatatcctc 421
            ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 856  aaaaagctcaggaataggaattctacggccatagatgagttgctggcgtccaatatcctc 797

                                                                        
Query: 422  aacaacagcagtggagccatcaaggtgtagttggatggacgatttcagctgattacgtgc 481
            ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||
Sbjct: 796  aacaacagcagtggagccatcaaggtggagttggatggaggatttcagctgattgcgtgc 737

                                                                        
Query: 482  acgaataacatcctcttcggtaaccctgtatgataatttgctcatctcttgcataattgc 541
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736  acgaataacatcctcttcggtaaccctgtatgataatttgctcatctcttgcataattgc 677

                                                                        
Query: 542  aaaagccaaatcatccaagcaatcaggcttagcgacagcatacacaccaaacaggccagt 601
            |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 676  aaaagccaaatcatccaagcaatcagccttagcgacagcatagacaccaaacaggccagt 617

                                                                        
Query: 602  gtccttatagtttgtgttgaatgccattatactctcagctatgtcattgattgctactct 661
            |||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 616  gtccttgtagtttgtattgaatgccattatactctcagctatttcattgattgctactct 557

             
Query: 662  c 662
            |
Sbjct: 556  c 556
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>dbj|AK060718.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-E10, full
            insert sequence
          Length = 1410

 Score =  523 bits (264), Expect = e-145
 Identities = 459/524 (87%)
 Strand = Plus / Minus

                                                                        
Query: 135  ataatatactgatgccaaaacaagcaatcatcttgcctttgcagactgtaaacatggtac 194
            |||||||||||||||||||| | ||||| |||||||||||||||| ||||||||| ||||
Sbjct: 1083 ataatatactgatgccaaaagaggcaattatcttgcctttgcagaatgtaaacatagtac 1024

                                                                        
Query: 195  actgctggttgaatctagtaacggagcatgtaggtcctgcgtctgaaccagttgtagtct 254
            |  | | |  || |||||||||||||||||||||||| ||| ||||||||||||||||| 
Sbjct: 1023 atcggttggagagtctagtaacggagcatgtaggtccggcgcctgaaccagttgtagtcc 964

                                                                        
Query: 255  ggaagagtcttaattggtcccatggcagcgatggcaatatcctggtcaaagatgaagcgg 314
            ||||||  || ||| |||||||| ||||| || || |||||||||||||| ||||| |||
Sbjct: 963  ggaagaccctgaatgggtcccattgcagcaatagcgatatcctggtcaaaaatgaaacgg 904

                                                                        
Query: 315  tttgcaacacgcctgatagtgctgggatcaactgcatctattctcgcaaaaagctcggga 374
            || || || ||| |||  ||||| |  ||||||||||||||||| ||||||||||| |||
Sbjct: 903  ttggccactcgcttgactgtgcttgcgtcaactgcatctattcttgcaaaaagctcagga 844

                                                                        
Query: 375  ataggaattctacggccatagatgagttgctgacgtccaatatcctcaacaacagcagtg 434
            ||||||||||| || ||||||||||||  |||||| ||||||||||||||||||||||||
Sbjct: 843  ataggaattcttcgaccatagatgagtaactgacggccaatatcctcaacaacagcagtg 784

                                                                        
Query: 435  gagccatcaaggtgtagttggatggacgatttcagctgattacgtgcacgaataacatcc 494
            || ||||| ||||| ||||||||||| ||||||||||||||||||||||| |||||||| 
Sbjct: 783  gaaccatcgaggtgcagttggatggaagatttcagctgattacgtgcacggataacatct 724

                                                                        
Query: 495  tcttcggtaaccctgtatgataatttgctcatctcttgcataattgcaaaagccaaatca 554
            || || ||||||| |||||| | |||||| ||||||||||| ||||||||||||||||||
Sbjct: 723  tcctcagtaacccggtatgacagtttgctaatctcttgcatgattgcaaaagccaaatca 664

                                                                        
Query: 555  tccaagcaatcaggcttagcgacagcatacacaccaaacaggccagtgtccttatagttt 614
            |||||||| ||||||||||| ||||| || |||||||| |||||||||||||| || |||
Sbjct: 663  tccaagcagtcaggcttagcaacagcgtagacaccaaagaggccagtgtccttgtaattt 604

                                                        
Query: 615  gtgttgaatgccattatactctcagctatgtcattgattgctac 658
            || || |||||||||||||||||||| ||||||||||| |||||
Sbjct: 603  gtattaaatgccattatactctcagcaatgtcattgatcgctac 560



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 42/46 (91%), Gaps = 1/46 (2%)
 Strand = Plus / Minus

                                                          
Query: 6    cacgtcagtcgaatttgcctacc-ttattgacagctttgtgggttt 50
            ||||||||| ||||||||||| | |||||||||||||||| |||||
Sbjct: 1206 cacgtcagttgaatttgcctatcattattgacagctttgttggttt 1161
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>dbj|AK120113.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025E12, full
            insert sequence
          Length = 2166

 Score =  509 bits (257), Expect = e-141
 Identities = 459/525 (87%), Gaps = 1/525 (0%)
 Strand = Plus / Minus

                                                                        
Query: 135  ataatatactgatgccaaaacaagcaatcatcttgcctttgcagactgtaaacatggtac 194
            |||||||||||||||||||| | ||||| |||||||||||||||| ||||||||| ||||
Sbjct: 1841 ataatatactgatgccaaaagaggcaattatcttgcctttgcagaatgtaaacatagtac 1782

                                                                        
Query: 195  actgctggttgaatctagtaacggagcatgtaggtcctgcgtctgaaccagttgtagtct 254
            |  | | |  || |||||||||||||||||||||||| ||| ||||||||||||||||| 
Sbjct: 1781 atcggttggagagtctagtaacggagcatgtaggtccggcgcctgaaccagttgtagtcc 1722

                                                                        
Query: 255  ggaagagtcttaattggtcccatggcagcgatggcaatatcctggtcaaagatgaagcgg 314
            ||||||  || ||| |||||||| ||||| || || |||||||||||||| ||||| |||
Sbjct: 1721 ggaagaccctgaatgggtcccattgcagcaatagcgatatcctggtcaaaaatgaaacgg 1662

                                                                        
Query: 315  tttgcaacacgcctgatagtgctgggatcaactgcatctattctcgcaaaaagctcggga 374
            || || || ||| |||  ||||| |  ||||||||||||||||| ||||||||||| |||
Sbjct: 1661 ttggccactcgcttgactgtgcttgcgtcaactgcatctattcttgcaaaaagctcagga 1602

                                                                        
Query: 375  ataggaattctacggccatagatgagttgctgacgtccaatatcctcaacaacagcag-t 433
            ||||||||||| || ||||||||||||  |||||| |||||||||||||||||||||| |
Sbjct: 1601 ataggaattcttcgaccatagatgagtaactgacggccaatatcctcaacaacagcaggt 1542

                                                                        
Query: 434  ggagccatcaaggtgtagttggatggacgatttcagctgattacgtgcacgaataacatc 493
            ||| ||||| ||||| ||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 1541 ggaaccatcgaggtgcagttggatggaagatttcagctgattacgtgcacggataacatc 1482

                                                                        
Query: 494  ctcttcggtaaccctgtatgataatttgctcatctcttgcataattgcaaaagccaaatc 553
             || || ||||||| |||||| | |||||| ||||||||||| |||||||||||||||||
Sbjct: 1481 ttcctcagtaacccggtatgacagtttgctaatctcttgcatgattgcaaaagccaaatc 1422

                                                                        
Query: 554  atccaagcaatcaggcttagcgacagcatacacaccaaacaggccagtgtccttatagtt 613
            ||||||||| ||||||||||| ||||| || |||||||| |||||||||||||| || ||
Sbjct: 1421 atccaagcagtcaggcttagcaacagcgtagacaccaaagaggccagtgtccttgtaatt 1362

                                                         
Query: 614  tgtgttgaatgccattatactctcagctatgtcattgattgctac 658
            ||| || |||||||||||||||||||| ||||||||||| |||||
Sbjct: 1361 tgtattaaatgccattatactctcagcaatgtcattgatcgctac 1317



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 42/46 (91%), Gaps = 1/46 (2%)
 Strand = Plus / Minus

                                                          
Query: 6    cacgtcagtcgaatttgcctacc-ttattgacagctttgtgggttt 50
            ||||||||| ||||||||||| | |||||||||||||||| |||||
Sbjct: 1964 cacgtcagttgaatttgcctatcattattgacagctttgttggttt 1919
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>gb|AY108579.1| Zea mays PCO102927 mRNA sequence
          Length = 2137

 Score =  458 bits (231), Expect = e-125
 Identities = 396/451 (87%)
 Strand = Plus / Minus

                                                                        
Query: 206  aatctagtaacggagcatgtaggtcctgcgtctgaaccagttgtagtctggaagagtctt 265
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||    | 
Sbjct: 1757 aatctagtaacggagcatgtaggtccggcgtctgaaccagttgtagtctggaagtccttg 1698

                                                                        
Query: 266  aattggtcccatggcagcgatggcaatatcctggtcaaagatgaagcggtttgcaacacg 325
             || || ||||| ||||| || |||| |||||| ||||||||||||||||||||||||||
Sbjct: 1697 gatcggccccatcgcagcaatagcaacatcctgatcaaagatgaagcggtttgcaacacg 1638

                                                                        
Query: 326  cctgatagtgctgggatcaactgcatctattctcgcaaaaagctcgggaataggaattct 385
            | | | |||||| | |||||| ||||||||||| ||||||||||||||  ||||||||||
Sbjct: 1637 cttcacagtgcttgcatcaacagcatctattcttgcaaaaagctcgggggtaggaattct 1578

                                                                        
Query: 386  acggccatagatgagttgctgacgtccaatatcctcaacaacagcagtggagccatcaag 445
             || |||||| | ||  ||||||| ||||| ||||||||||||||||| || ||||||||
Sbjct: 1577 tcgtccataggtcagcagctgacggccaatgtcctcaacaacagcagttgaaccatcaag 1518

                                                                        
Query: 446  gtgtagttggatggacgatttcagctgattacgtgcacgaataacatcctcttcggtaac 505
            ||| |||||||| || || |||||||||||||||||||| |||||||| ||||| |||||
Sbjct: 1517 gtggagttggatagaggacttcagctgattacgtgcacggataacatcttcttccgtaac 1458

                                                                        
Query: 506  cctgtatgataatttgctcatctcttgcataattgcaaaagccaaatcatccaagcaatc 565
            || |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1457 ccggtatgacaatttgctcatctcatgcataattgcaaaagccaaatcatccaagcaatc 1398

                                                                        
Query: 566  aggcttagcgacagcatacacaccaaacaggccagtgtccttatagtttgtgttgaatgc 625
            || |||||| |||||||| |||||||| || ||||||||||| || || || |||||| |
Sbjct: 1397 agccttagcaacagcatagacaccaaaaagaccagtgtccttgtaattcgtattgaatcc 1338

                                           
Query: 626  cattatactctcagctatgtcattgattgct 656
            ||||| ||||||||| |||||||||||||||
Sbjct: 1337 cattacactctcagcgatgtcattgattgct 1307
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>gb|AY111909.1| Zea mays CL491_-2 mRNA sequence
          Length = 584

 Score =  258 bits (130), Expect = 2e-65
 Identities = 242/281 (86%)
 Strand = Plus / Minus

                                                                       
Query: 376 taggaattctacggccatagatgagttgctgacgtccaatatcctcaacaacagcagtgg 435
           |||||||||| || |||||| | ||  |||| || ||||| ||||| ||||||||||| |
Sbjct: 557 taggaattcttcgtccataggtcagcagctggcggccaatgtcctcgacaacagcagttg 498

                                                                       
Query: 436 agccatcaaggtgtagttggatggacgatttcagctgattacgtgcacgaataacatcct 495
           | ||||||||||| |||||||| || || |||||||||||||||||||| |||||||| |
Sbjct: 497 aaccatcaaggtggagttggattgaggacttcagctgattacgtgcacggataacatctt 438

                                                                       
Query: 496 cttcggtaaccctgtatgataatttgctcatctcttgcataattgcaaaagccaaatcat 555
           | || ||||||| |||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 437 cctccgtaacccggtatgacaatttgctcatctcatgcataattgcaaaagccaaatcat 378

                                                                       
Query: 556 ccaagcaatcaggcttagcgacagcatacacaccaaacaggccagtgtccttatagtttg 615
           |||||||||||| |||||| |||||||| |||||     | ||||||||||| || ||  
Sbjct: 377 ccaagcaatcagccttagcaacagcatagacaccnnnnngaccagtgtccttgtaattca 318

                                                    
Query: 616 tgttgaatgccattatactctcagctatgtcattgattgct 656
           ||||||||| ||||| ||||||||| |||||||||||||||
Sbjct: 317 tgttgaatgacattacactctcagcaatgtcattgattgct 277
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  143 bits (72), Expect = 8e-31
 Identities = 141/164 (85%)
 Strand = Plus / Minus

                                                                           
Query: 135     ataatatactgatgccaaaacaagcaatcatcttgcctttgcagactgtaaacatggtac 194
               |||||||||||||||||||| | ||||| |||||||||||||||| ||||||||| ||||
Sbjct: 5842767 ataatatactgatgccaaaagaggcaattatcttgcctttgcagaatgtaaacatagtac 5842708

                                                                           
Query: 195     actgctggttgaatctagtaacggagcatgtaggtcctgcgtctgaaccagttgtagtct 254
               |  | | |  || |||||||||||||||||||||||| ||| ||||||||||||||||| 
Sbjct: 5842707 atcggttggagagtctagtaacggagcatgtaggtccggcgcctgaaccagttgtagtcc 5842648

                                                           
Query: 255     ggaagagtcttaattggtcccatggcagcgatggcaatatcctg 298
               ||||||  || ||| |||||||| ||||| || || ||||||||
Sbjct: 5842647 ggaagaccctgaatgggtcccattgcagcaatagcgatatcctg 5842604



 Score =  121 bits (61), Expect = 3e-24
 Identities = 91/101 (90%)
 Strand = Plus / Minus

                                                                           
Query: 470     ctgattacgtgcacgaataacatcctcttcggtaaccctgtatgataatttgctcatctc 529
               ||||||||||||||| |||||||| || || ||||||| |||||| | |||||| |||||
Sbjct: 5841436 ctgattacgtgcacggataacatcttcctcagtaacccggtatgacagtttgctaatctc 5841377

                                                        
Query: 530     ttgcataattgcaaaagccaaatcatccaagcaatcaggct 570
               |||||| |||||||||||||||||||||||||| |||||||
Sbjct: 5841376 ttgcatgattgcaaaagccaaatcatccaagcagtcaggct 5841336



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 80/90 (88%)
 Strand = Plus / Minus

                                                                           
Query: 569     cttagcgacagcatacacaccaaacaggccagtgtccttatagtttgtgttgaatgccat 628
               |||||| ||||| || |||||||| |||||||||||||| || ||||| || ||||||||
Sbjct: 5840649 cttagcaacagcgtagacaccaaagaggccagtgtccttgtaatttgtattaaatgccat 5840590

                                             
Query: 629     tatactctcagctatgtcattgattgctac 658
               |||||||||||| ||||||||||| |||||
Sbjct: 5840589 tatactctcagcaatgtcattgatcgctac 5840560



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 64/69 (92%)
 Strand = Plus / Minus

                                                                           
Query: 404     ctgacgtccaatatcctcaacaacagcagtggagccatcaaggtgtagttggatggacga 463
               |||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||| ||
Sbjct: 5841591 ctgacggccaatatcctcaacaacagcagtggaaccatcgaggtgcagttggatggaaga 5841532

                        
Query: 464     tttcagctg 472
               |||||||||
Sbjct: 5841531 tttcagctg 5841523



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 92/107 (85%)
 Strand = Plus / Minus

                                                                           
Query: 295     cctggtcaaagatgaagcggtttgcaacacgcctgatagtgctgggatcaactgcatcta 354
               |||||||||| ||||| ||||| || || ||| |||  ||||| |  |||||||||||||
Sbjct: 5841786 cctggtcaaaaatgaaacggttggccactcgcttgactgtgcttgcgtcaactgcatcta 5841727

                                                              
Query: 355     ttctcgcaaaaagctcgggaataggaattctacggccatagatgagt 401
               |||| ||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 5841726 ttcttgcaaaaagctcaggaataggaattcttcgaccatagatgagt 5841680



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 42/46 (91%), Gaps = 1/46 (2%)
 Strand = Plus / Minus

                                                             
Query: 6       cacgtcagtcgaatttgcctacc-ttattgacagctttgtgggttt 50
               ||||||||| ||||||||||| | |||||||||||||||| |||||
Sbjct: 5842890 cacgtcagttgaatttgcctatcattattgacagctttgttggttt 5842845
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>gb|AC146619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNAa0021B21, from chromosome 3, complete sequence
          Length = 139208

 Score =  143 bits (72), Expect = 8e-31
 Identities = 141/164 (85%)
 Strand = Plus / Minus

                                                                         
Query: 135   ataatatactgatgccaaaacaagcaatcatcttgcctttgcagactgtaaacatggtac 194
             |||||||||||||||||||| | ||||| |||||||||||||||| ||||||||| ||||
Sbjct: 71597 ataatatactgatgccaaaagaggcaattatcttgcctttgcagaatgtaaacatagtac 71538

                                                                         
Query: 195   actgctggttgaatctagtaacggagcatgtaggtcctgcgtctgaaccagttgtagtct 254
             |  | | |  || |||||||||||||||||||||||| ||| ||||||||||||||||| 
Sbjct: 71537 atcggttggagagtctagtaacggagcatgtaggtccggcgcctgaaccagttgtagtcc 71478

                                                         
Query: 255   ggaagagtcttaattggtcccatggcagcgatggcaatatcctg 298
             ||||||  || ||| |||||||| ||||| || || ||||||||
Sbjct: 71477 ggaagaccctgaatgggtcccattgcagcaatagcgatatcctg 71434



 Score =  121 bits (61), Expect = 3e-24
 Identities = 91/101 (90%)
 Strand = Plus / Minus

                                                                         
Query: 470   ctgattacgtgcacgaataacatcctcttcggtaaccctgtatgataatttgctcatctc 529
             ||||||||||||||| |||||||| || || ||||||| |||||| | |||||| |||||
Sbjct: 70266 ctgattacgtgcacggataacatcttcctcagtaacccggtatgacagtttgctaatctc 70207

                                                      
Query: 530   ttgcataattgcaaaagccaaatcatccaagcaatcaggct 570
             |||||| |||||||||||||||||||||||||| |||||||
Sbjct: 70206 ttgcatgattgcaaaagccaaatcatccaagcagtcaggct 70166



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 80/90 (88%)
 Strand = Plus / Minus

                                                                         
Query: 569   cttagcgacagcatacacaccaaacaggccagtgtccttatagtttgtgttgaatgccat 628
             |||||| ||||| || |||||||| |||||||||||||| || ||||| || ||||||||
Sbjct: 69479 cttagcaacagcgtagacaccaaagaggccagtgtccttgtaatttgtattaaatgccat 69420

                                           
Query: 629   tatactctcagctatgtcattgattgctac 658
             |||||||||||| ||||||||||| |||||
Sbjct: 69419 tatactctcagcaatgtcattgatcgctac 69390



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 64/69 (92%)
 Strand = Plus / Minus

                                                                         
Query: 404   ctgacgtccaatatcctcaacaacagcagtggagccatcaaggtgtagttggatggacga 463
             |||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||| ||
Sbjct: 70421 ctgacggccaatatcctcaacaacagcagtggaaccatcgaggtgcagttggatggaaga 70362

                      
Query: 464   tttcagctg 472
             |||||||||
Sbjct: 70361 tttcagctg 70353



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 92/107 (85%)
 Strand = Plus / Minus

                                                                         
Query: 295   cctggtcaaagatgaagcggtttgcaacacgcctgatagtgctgggatcaactgcatcta 354
             |||||||||| ||||| ||||| || || ||| |||  ||||| |  |||||||||||||
Sbjct: 70616 cctggtcaaaaatgaaacggttggccactcgcttgactgtgcttgcgtcaactgcatcta 70557

                                                            
Query: 355   ttctcgcaaaaagctcgggaataggaattctacggccatagatgagt 401
             |||| ||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 70556 ttcttgcaaaaagctcaggaataggaattcttcgaccatagatgagt 70510



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 42/46 (91%), Gaps = 1/46 (2%)
 Strand = Plus / Minus

                                                           
Query: 6     cacgtcagtcgaatttgcctacc-ttattgacagctttgtgggttt 50
             ||||||||| ||||||||||| | |||||||||||||||| |||||
Sbjct: 71720 cacgtcagttgaatttgcctatcattattgacagctttgttggttt 71675
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  143 bits (72), Expect = 8e-31
 Identities = 141/164 (85%)
 Strand = Plus / Minus

                                                                           
Query: 135     ataatatactgatgccaaaacaagcaatcatcttgcctttgcagactgtaaacatggtac 194
               |||||||||||||||||||| | ||||| |||||||||||||||| ||||||||| ||||
Sbjct: 5841980 ataatatactgatgccaaaagaggcaattatcttgcctttgcagaatgtaaacatagtac 5841921

                                                                           
Query: 195     actgctggttgaatctagtaacggagcatgtaggtcctgcgtctgaaccagttgtagtct 254
               |  | | |  || |||||||||||||||||||||||| ||| ||||||||||||||||| 
Sbjct: 5841920 atcggttggagagtctagtaacggagcatgtaggtccggcgcctgaaccagttgtagtcc 5841861

                                                           
Query: 255     ggaagagtcttaattggtcccatggcagcgatggcaatatcctg 298
               ||||||  || ||| |||||||| ||||| || || ||||||||
Sbjct: 5841860 ggaagaccctgaatgggtcccattgcagcaatagcgatatcctg 5841817



 Score =  121 bits (61), Expect = 3e-24
 Identities = 91/101 (90%)
 Strand = Plus / Minus

                                                                           
Query: 470     ctgattacgtgcacgaataacatcctcttcggtaaccctgtatgataatttgctcatctc 529
               ||||||||||||||| |||||||| || || ||||||| |||||| | |||||| |||||
Sbjct: 5840649 ctgattacgtgcacggataacatcttcctcagtaacccggtatgacagtttgctaatctc 5840590

                                                        
Query: 530     ttgcataattgcaaaagccaaatcatccaagcaatcaggct 570
               |||||| |||||||||||||||||||||||||| |||||||
Sbjct: 5840589 ttgcatgattgcaaaagccaaatcatccaagcagtcaggct 5840549



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 80/90 (88%)
 Strand = Plus / Minus

                                                                           
Query: 569     cttagcgacagcatacacaccaaacaggccagtgtccttatagtttgtgttgaatgccat 628
               |||||| ||||| || |||||||| |||||||||||||| || ||||| || ||||||||
Sbjct: 5839862 cttagcaacagcgtagacaccaaagaggccagtgtccttgtaatttgtattaaatgccat 5839803

                                             
Query: 629     tatactctcagctatgtcattgattgctac 658
               |||||||||||| ||||||||||| |||||
Sbjct: 5839802 tatactctcagcaatgtcattgatcgctac 5839773



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 64/69 (92%)
 Strand = Plus / Minus

                                                                           
Query: 404     ctgacgtccaatatcctcaacaacagcagtggagccatcaaggtgtagttggatggacga 463
               |||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||| ||
Sbjct: 5840804 ctgacggccaatatcctcaacaacagcagtggaaccatcgaggtgcagttggatggaaga 5840745

                        
Query: 464     tttcagctg 472
               |||||||||
Sbjct: 5840744 tttcagctg 5840736



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 92/107 (85%)
 Strand = Plus / Minus

                                                                           
Query: 295     cctggtcaaagatgaagcggtttgcaacacgcctgatagtgctgggatcaactgcatcta 354
               |||||||||| ||||| ||||| || || ||| |||  ||||| |  |||||||||||||
Sbjct: 5840999 cctggtcaaaaatgaaacggttggccactcgcttgactgtgcttgcgtcaactgcatcta 5840940

                                                              
Query: 355     ttctcgcaaaaagctcgggaataggaattctacggccatagatgagt 401
               |||| ||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 5840939 ttcttgcaaaaagctcaggaataggaattcttcgaccatagatgagt 5840893



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 42/46 (91%), Gaps = 1/46 (2%)
 Strand = Plus / Minus

                                                             
Query: 6       cacgtcagtcgaatttgcctacc-ttattgacagctttgtgggttt 50
               ||||||||| ||||||||||| | |||||||||||||||| |||||
Sbjct: 5842103 cacgtcagttgaatttgcctatcattattgacagctttgttggttt 5842058
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>gb|AF297643.1|AF297643 Cucumis melo mitochondrial processing peptidase beta subunit mRNA,
            complete cds; nuclear gene for mitochondrial product
          Length = 1906

 Score =  105 bits (53), Expect = 2e-19
 Identities = 107/125 (85%)
 Strand = Plus / Minus

                                                                        
Query: 537  attgcaaaagccaaatcatccaagcaatcaggcttagcgacagcatacacaccaaacagg 596
            |||||| ||||||||||||||||||| |||||||| || |||||||| |||||||| || 
Sbjct: 1298 attgcataagccaaatcatccaagcagtcaggctttgcaacagcatagacaccaaaaaga 1239

                                                                        
Query: 597  ccagtgtccttatagtttgtgttgaatgccattatactctcagctatgtcattgattgct 656
            ||||||||||| || || |||||||| ||||| ||||| || ||||  |||||||| || 
Sbjct: 1238 ccagtgtccttgtaattggtgttgaaagccatcatactttctgctacctcattgatggca 1179

                 
Query: 657  actct 661
            |||||
Sbjct: 1178 actct 1174



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                        
Query: 315  tttgcaacacgcctgatagtgctgggatcaactgcatctattctcgcaaaaagctcggga 374
            |||||||||||  | |||||||| | |||||| ||||| ||||| ||||| |  |||| |
Sbjct: 1520 tttgcaacacgttttatagtgcttgcatcaacagcatcaattcttgcaaacaattcggca 1461

                             
Query: 375  ataggaattctacggcc 391
            |  ||||||||||||||
Sbjct: 1460 aacggaattctacggcc 1444
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>gb|AF363285.1|AF363285 Avicennia marina mitochondrial processing peptidase mRNA, complete
            cds; nuclear gene for mitochondrial product
          Length = 1870

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 101/120 (84%)
 Strand = Plus / Minus

                                                                        
Query: 533  cataattgcaaaagccaaatcatccaagcaatcaggcttagcgacagcatacacaccaaa 592
            |||||| ||| | |||||||| |||||||| ||||||||||| | |||||| ||||||||
Sbjct: 1319 cataatcgcataggccaaatcgtccaagcagtcaggcttagcaatagcataaacaccaaa 1260

                                                                        
Query: 593  caggccagtgtccttatagtttgtgttgaatgccattatactctcagctatgtcattgat 652
             |  |||||||| |||||||| || ||||| ||||| || ||||| ||||| ||||||||
Sbjct: 1259 taaaccagtgtctttatagttggtattgaaagccatcatgctctcggctatttcattgat 1200



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                        
Query: 300  tcaaagatgaagcggtttgcaacacgcctgatagtgctgggatcaactgcatctattctc 359
            ||||| ||||| ||||||||||||||| |||| ||||||||||| || || ||||| || 
Sbjct: 1552 tcaaatatgaatcggtttgcaacacgcttgatggtgctgggatctacggcgtctatcctg 1493

                 
Query: 360  gcaaa 364
            |||||
Sbjct: 1492 gcaaa 1488



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 209  ctagtaacggagcatgtaggtcctgcgtctgaaccagttgtagtctgg 256
            |||||||||||||  |||||| ||||| |||||||||||||| |||||
Sbjct: 1643 ctagtaacggagccagtaggttctgcgcctgaaccagttgtaatctgg 1596
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>ref|NM_111075.2| Arabidopsis thaliana MPPBETA; metalloendopeptidase AT3G02090
            (MPPBETA) transcript variant AT3G02090.1 mRNA, complete
            cds
          Length = 2056

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 85/101 (84%)
 Strand = Plus / Minus

                                                                        
Query: 549  aaatcatccaagcaatcaggcttagcgacagcatacacaccaaacaggccagtgtcctta 608
            ||||||||||||||||| | ||| || || ||||| || || ||||| ||||| ||||| 
Sbjct: 1331 aaatcatccaagcaatcggccttggcaactgcataaacgccgaacagtccagtatccttg 1272

                                                     
Query: 609  tagtttgtgttgaatgccattatactctcagctatgtcatt 649
            ||||| ||||||||||||||||| || || ||||| |||||
Sbjct: 1271 tagttagtgttgaatgccattatgctttctgctatttcatt 1231
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>ref|NM_180169.1| Arabidopsis thaliana MPPBETA; metalloendopeptidase AT3G02090
            (MPPBETA) transcript variant AT3G02090.2 mRNA, complete
            cds
          Length = 2060

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 85/101 (84%)
 Strand = Plus / Minus

                                                                        
Query: 549  aaatcatccaagcaatcaggcttagcgacagcatacacaccaaacaggccagtgtcctta 608
            ||||||||||||||||| | ||| || || ||||| || || ||||| ||||| ||||| 
Sbjct: 1331 aaatcatccaagcaatcggccttggcaactgcataaacgccgaacagtccagtatccttg 1272

                                                     
Query: 609  tagtttgtgttgaatgccattatactctcagctatgtcatt 649
            ||||| ||||||||||||||||| || || ||||| |||||
Sbjct: 1271 tagttagtgttgaatgccattatgctttctgctatttcatt 1231
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>gb|BT000830.1| Arabidopsis thaliana putative mitochondrial processing peptidase
            (At3g02090/F1C9_12) mRNA, complete cds
          Length = 1596

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 85/101 (84%)
 Strand = Plus / Minus

                                                                        
Query: 549  aaatcatccaagcaatcaggcttagcgacagcatacacaccaaacaggccagtgtcctta 608
            ||||||||||||||||| | ||| || || ||||| || || ||||| ||||| ||||| 
Sbjct: 1256 aaatcatccaagcaatcggccttggcaactgcataaacgccgaacagtccagtatccttg 1197

                                                     
Query: 609  tagtttgtgttgaatgccattatactctcagctatgtcatt 649
            ||||| ||||||||||||||||| || || ||||| |||||
Sbjct: 1196 tagttagtgttgaatgccattatgctttctgctatttcatt 1156
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>gb|BT000662.1| Arabidopsis thaliana clone RAFL07-09-O22 (R10705) putative
            mitochondrial processing peptidase (At3g02090) mRNA,
            complete cds
          Length = 2036

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 85/101 (84%)
 Strand = Plus / Minus

                                                                        
Query: 549  aaatcatccaagcaatcaggcttagcgacagcatacacaccaaacaggccagtgtcctta 608
            ||||||||||||||||| | ||| || || ||||| || || ||||| ||||| ||||| 
Sbjct: 1319 aaatcatccaagcaatcggccttggcaactgcataaacgccgaacagtccagtatccttg 1260

                                                     
Query: 609  tagtttgtgttgaatgccattatactctcagctatgtcatt 649
            ||||| ||||||||||||||||| || || ||||| |||||
Sbjct: 1259 tagttagtgttgaatgccattatgctttctgctatttcatt 1219
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>gb|AY057579.1| Arabidopsis thaliana At3g02090 mRNA sequence
          Length = 2026

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 85/101 (84%)
 Strand = Plus / Minus

                                                                        
Query: 549  aaatcatccaagcaatcaggcttagcgacagcatacacaccaaacaggccagtgtcctta 608
            ||||||||||||||||| | ||| || || ||||| || || ||||| ||||| ||||| 
Sbjct: 1327 aaatcatccaagcaatcggccttggcaactgcataaacgccgaacagtccagtatccttg 1268

                                                     
Query: 609  tagtttgtgttgaatgccattatactctcagctatgtcatt 649
            ||||| ||||||||||||||||| || || ||||| |||||
Sbjct: 1267 tagttagtgttgaatgccattatgctttctgctatttcatt 1227
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>gb|AY126990.1| Arabidopsis thaliana AT3g02090/F1C9_12 mRNA, complete cds
          Length = 1911

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 85/101 (84%)
 Strand = Plus / Minus

                                                                        
Query: 549  aaatcatccaagcaatcaggcttagcgacagcatacacaccaaacaggccagtgtcctta 608
            ||||||||||||||||| | ||| || || ||||| || || ||||| ||||| ||||| 
Sbjct: 1326 aaatcatccaagcaatcggccttggcaactgcataaacgccgaacagtccagtatccttg 1267

                                                     
Query: 609  tagtttgtgttgaatgccattatactctcagctatgtcatt 649
            ||||| ||||||||||||||||| || || ||||| |||||
Sbjct: 1266 tagttagtgttgaatgccattatgctttctgctatttcatt 1226
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>emb|BX823363.1|CNS0A4RL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS27ZD01 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1928

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 85/101 (84%)
 Strand = Plus / Minus

                                                                        
Query: 549  aaatcatccaagcaatcaggcttagcgacagcatacacaccaaacaggccagtgtcctta 608
            ||||||||||||||||| | ||| || || ||||| || || ||||| ||||| ||||| 
Sbjct: 1322 aaatcatccaagcaatcggccttggcaactgcataaacgccgaacagtccagtatccttg 1263

                                                     
Query: 609  tagtttgtgttgaatgccattatactctcagctatgtcatt 649
            ||||| ||||||||||||||||| || || ||||| |||||
Sbjct: 1262 tagttagtgttgaatgccattatgctttctgctatttcatt 1222
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>gb|BT001915.1| Arabidopsis thaliana clone C105149 putative mitochondrial processing
            peptidase (At3g02090) mRNA, complete cds
          Length = 1627

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 85/101 (84%)
 Strand = Plus / Minus

                                                                        
Query: 549  aaatcatccaagcaatcaggcttagcgacagcatacacaccaaacaggccagtgtcctta 608
            ||||||||||||||||| | ||| || || ||||| || || ||||| ||||| ||||| 
Sbjct: 1256 aaatcatccaagcaatcggccttggcaactgcataaacgccgaacagtccagtatccttg 1197

                                                     
Query: 609  tagtttgtgttgaatgccattatactctcagctatgtcatt 649
            ||||| ||||||||||||||||| || || ||||| |||||
Sbjct: 1196 tagttagtgttgaatgccattatgctttctgctatttcatt 1156
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>emb|BX825296.1|CNS0A4ZN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTSIL27ZD07 of Silique of strain col-0 of Arabidopsis
            thaliana (thale cress)
          Length = 1939

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 83/99 (83%)
 Strand = Plus / Minus

                                                                        
Query: 551  atcatccaagcaatcaggcttagcgacagcatacacaccaaacaggccagtgtccttata 610
            ||||||||||||||| | ||| || || ||||| || || ||||| ||||| ||||| ||
Sbjct: 1304 atcatccaagcaatcggccttggcaactgcataaacgccgaacagtccagtatccttgta 1245

                                                   
Query: 611  gtttgtgttgaatgccattatactctcagctatgtcatt 649
            ||| ||||||||||||||||| || || ||||| |||||
Sbjct: 1244 gttagtgttgaatgccattatgctttctgctatttcatt 1206
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>emb|X80237.1|STBIMPP S.tuberosum mRNA for beta-I MPP
          Length = 1961

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                        
Query: 557  caagcaatcaggcttagcgacagcatacacaccaaacaggccagtgtccttatagtttgt 616
            ||||||||||||||||||  ||||||| ||||||||||| || || || |||||||| ||
Sbjct: 1275 caagcaatcaggcttagcttcagcatagacaccaaacagccctgtatctttatagttggt 1216

                                      
Query: 617  gttgaatgccattatactctcagcta 642
            ||| || ||||| | ||| |||||||
Sbjct: 1215 gttaaaagccatcacactttcagcta 1190



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 206  aatctagtaacggagcatgtaggtcctgcgtctgaaccagttgta 250
            ||||||||| || |||  ||| |||||||||| ||||||||||||
Sbjct: 1626 aatctagtagcgcagccagtatgtcctgcgtcggaaccagttgta 1582



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 462  gatttcagctgattacgtgcacgaa 486
            |||||||||||||||||||| ||||
Sbjct: 1370 gatttcagctgattacgtgcgcgaa 1346
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>gb|BT013728.1| Lycopersicon esculentum clone 132587R, mRNA sequence
          Length = 1778

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 208  tctagtaacggagcatgtaggtcctgcgtctgaaccagtt 247
            |||| ||||||||||||||||| |||||||||||||||||
Sbjct: 1667 tctaataacggagcatgtaggttctgcgtctgaaccagtt 1628



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 77/93 (82%)
 Strand = Plus / Minus

                                                                        
Query: 548  caaatcatccaagcaatcaggcttagcgacagcatacacaccaaacaggccagtgtcctt 607
            |||||||  ||| ||||||||||| || ||||||||||| || ||||  ||||| |||||
Sbjct: 1327 caaatcactcaaacaatcaggctttgcaacagcatacacgccgaacaaaccagtatcctt 1268

                                             
Query: 608  atagtttgtgttgaatgccattatactctcagc 640
            |||||| ||||| || | ||| || ||||||||
Sbjct: 1267 atagttggtgttaaaagacatcatgctctcagc 1235
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>gb|DQ284488.1| Solanum tuberosum clone 028E08 mitochondrial processing
            peptidase-like mRNA, complete cds; nuclear gene for
            mitochondrial product
          Length = 1761

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 79/95 (83%)
 Strand = Plus / Minus

                                                                        
Query: 548  caaatcatccaagcaatcaggcttagcgacagcatacacaccaaacaggccagtgtcctt 607
            |||||||  ||| ||||||||||| || ||||||||||| || ||||| ||||| |||||
Sbjct: 1312 caaatcactcaaacaatcaggctttgcaacagcatacacgccgaacagaccagtatcctt 1253

                                               
Query: 608  atagtttgtgttgaatgccattatactctcagcta 642
            ||| || ||||| || | ||| || ||||||||||
Sbjct: 1252 ataattggtgttaaaagacatcatgctctcagcta 1218
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>gb|AC011664.10|ATAC011664 Arabidopsis thaliana chromosome III BAC F1C9 genomic sequence, complete
             sequence
          Length = 103960

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                        
Query: 591   aacaggccagtgtccttatagtttgtgttgaatgccattatactctcagctatgtcatt 649
             ||||| ||||| ||||| ||||| ||||||||||||||||| || || ||||| |||||
Sbjct: 41747 aacagtccagtatccttgtagttagtgttgaatgccattatgctttctgctatttcatt 41805
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>emb|X80235.1|STBIIMPP S.tuberosum mRNA for beta-II MPP
          Length = 1848

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 78/95 (82%)
 Strand = Plus / Minus

                                                                        
Query: 548  caaatcatccaagcaatcaggcttagcgacagcatacacaccaaacaggccagtgtcctt 607
            |||||||  ||| ||||||| ||| || ||||||||||| || ||||| ||||| |||||
Sbjct: 1311 caaatcactcaaacaatcagactttgcaacagcatacacgccgaacagaccagtatcctt 1252

                                               
Query: 608  atagtttgtgttgaatgccattatactctcagcta 642
            ||| || ||||| || | ||| || ||||||||||
Sbjct: 1251 ataattggtgttaaaagacatcatgctctcagcta 1217
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>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome
          Length = 3179300

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 59      aagacaggggcaaggaaaacga 80
               ||||||||||||||||||||||
Sbjct: 1831617 aagacaggggcaaggaaaacga 1831596
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>emb|AJ538971.1|NTA538971 Nicotiana tabacum cDNA-AFLP-fragment BT31-M2-028
          Length = 274

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 468 agctgattacgtgcacgaataacatc 493
           |||||||||||||||||||| |||||
Sbjct: 65  agctgattacgtgcacgaatgacatc 90
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>gb|AC134460.4| Mus musculus BAC clone RP23-373D18 from chromosome 10, complete sequence
          Length = 174545

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 19     tttgcctaccttattgacagc 39
              |||||||||||||||||||||
Sbjct: 157407 tttgcctaccttattgacagc 157427
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>emb|CR450809.6| Zebrafish DNA sequence from clone CH211-195I6 in linkage group 2,
              complete sequence
          Length = 206746

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 389    gccatagatgagttgctgacg 409
              |||||||||||||||||||||
Sbjct: 169259 gccatagatgagttgctgacg 169279
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>ref|XM_678031.1| PREDICTED: Danio rerio similar to retinal-specific ATP transporter
            ABCA4 (LOC555506), mRNA
          Length = 4932

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 389  gccatagatgagttgctgacg 409
            |||||||||||||||||||||
Sbjct: 4825 gccatagatgagttgctgacg 4845
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>gb|AC105061.16| Mus musculus chromosome 19, clone RP23-117I10, complete sequence
          Length = 210038

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 140    atactgatgccaaaacaagca 160
              |||||||||||||||||||||
Sbjct: 156558 atactgatgccaaaacaagca 156538
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>gb|AC153883.6| Mus musculus 10 BAC RP23-368G20 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 181524

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 19     tttgcctaccttattgacagc 39
              |||||||||||||||||||||
Sbjct: 162746 tttgcctaccttattgacagc 162726
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>gb|AC153533.4| Mus musculus 10 BAC RP23-474K10 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 187069

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 19    tttgcctaccttattgacagc 39
             |||||||||||||||||||||
Sbjct: 85455 tttgcctaccttattgacagc 85435
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>gb|AC154426.2| Mus musculus BAC clone RP24-199A21 from chromosome 14, complete sequence
          Length = 210568

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 507    ctgtatgataatttgctcat 526
              ||||||||||||||||||||
Sbjct: 103824 ctgtatgataatttgctcat 103805
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>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 412     caatatcctcaacaacagca 431
               ||||||||||||||||||||
Sbjct: 4914380 caatatcctcaacaacagca 4914399
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>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 412     caatatcctcaacaacagca 431
               ||||||||||||||||||||
Sbjct: 4909721 caatatcctcaacaacagca 4909740
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>ref|XM_611761.2| PREDICTED: Bos taurus similar to CG2747-PB, isoform B, transcript
           variant 1 (LOC540503), mRNA
          Length = 2504

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 142 actgatgccaaaacaagcaa 161
           ||||||||||||||||||||
Sbjct: 842 actgatgccaaaacaagcaa 861
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>ref|XM_879730.1| PREDICTED: Bos taurus similar to CG2747-PB, isoform B, transcript
           variant 2 (LOC540503), mRNA
          Length = 1855

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 142 actgatgccaaaacaagcaa 161
           ||||||||||||||||||||
Sbjct: 842 actgatgccaaaacaagcaa 861
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>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 412     caatatcctcaacaacagca 431
               ||||||||||||||||||||
Sbjct: 4910932 caatatcctcaacaacagca 4910951
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>ref|NG_000008.6| Homo sapiens cytochrome P450, family 2, subfamily A (CYP2A) on
             chromosome 19
          Length = 413528

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 155   caagcaatcatcttgcctttgcag 178
             |||||||| |||||||||||||||
Sbjct: 67135 caagcaattatcttgcctttgcag 67112
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>gb|AY810036.1| Schistosoma japonicum SJCHGC05583 protein mRNA, partial cds
          Length = 1669

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 412 caatatcctcaacaacagca 431
           ||||||||||||||||||||
Sbjct: 518 caatatcctcaacaacagca 537
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>gb|AC146174.2| Pan troglodytes BAC clone CH251-549F12 from Y, complete sequence
          Length = 191823

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 69     caaggaaaacgaagactcaaaaaa 92
              |||||||||| |||||||||||||
Sbjct: 115036 caaggaaaacaaagactcaaaaaa 115059
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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 412     caatatcctcaacaacagca 431
               ||||||||||||||||||||
Sbjct: 4970704 caatatcctcaacaacagca 4970723
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>emb|AL590995.14| Human DNA sequence from clone RP11-475B22 on chromosome 6, complete
             sequence
          Length = 113362

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 511   atgataatttgctcatctct 530
             ||||||||||||||||||||
Sbjct: 75557 atgataatttgctcatctct 75538
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>emb|AL353150.25| Human DNA sequence from clone RP11-82L18 on chromosome 9 Contains the
             3' end of a novel gene (SHC3) and a novel gene, complete
             sequence
          Length = 113051

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 430   cagtggagccatcaaggtgt 449
             ||||||||||||||||||||
Sbjct: 35500 cagtggagccatcaaggtgt 35481
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>emb|AL121911.15|HSDJ989D7 Human DNA sequence from clone RP5-989D7 on chromosome 20 Contains part
             of a novel gene, complete sequence
          Length = 119790

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 413   aatatcctcaacaacagcag 432
             ||||||||||||||||||||
Sbjct: 55366 aatatcctcaacaacagcag 55347
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>emb|AL050344.31|HSJ799D16 Human DNA sequence from clone RP4-799D16 on chromosome 1p34.3-36.1
             Contains the 3' end of a novel gene, complete sequence
          Length = 127109

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 155   caagcaatcatcttgccttt 174
             ||||||||||||||||||||
Sbjct: 83365 caagcaatcatcttgccttt 83384
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>emb|X72832.1|SEDEXB S.equisimilis dexb, abc, lrp, skc, rel genes and ORF1
          Length = 8931

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 540  gcaaaagccaaatcatccaa 559
            ||||||||||||||||||||
Sbjct: 3287 gcaaaagccaaatcatccaa 3306
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>gb|AC078925.18| Homo sapiens 12q BAC RP11-76C10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 153284

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 155   caagcaatcatcttgccttt 174
             ||||||||||||||||||||
Sbjct: 96885 caagcaatcatcttgccttt 96904
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>dbj|BS000614.1| Pan troglodytes chromosome Y clone:PTBY-009K01, complete sequences
          Length = 63466

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 69    caaggaaaacgaagactcaaaaaa 92
             |||||||||| |||||||||||||
Sbjct: 39928 caaggaaaacaaagactcaaaaaa 39905
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>dbj|BS000556.1| Pan troglodytes chromosome Y clone:PTB-461C11, complete sequences
          Length = 148964

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 69     caaggaaaacgaagactcaaaaaa 92
              |||||||||| |||||||||||||
Sbjct: 134564 caaggaaaacaaagactcaaaaaa 134541
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 69       caaggaaaacgaagactcaaaaaa 92
                |||||||||| |||||||||||||
Sbjct: 23749871 caaggaaaacaaagactcaaaaaa 23749894
to top
>gb|AC153895.5| Mus musculus 6 BAC RP23-114F22 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 187298

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 170    cctttgcagactgtaaacat 189
              ||||||||||||||||||||
Sbjct: 141924 cctttgcagactgtaaacat 141905
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 544     aagccaaatcatccaagcaa 563
               ||||||||||||||||||||
Sbjct: 3363419 aagccaaatcatccaagcaa 3363400
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>gb|AC008537.5|AC008537 Homo sapiens chromosome 19 clone CTC-490E21, complete sequence
          Length = 169089

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 155   caagcaatcatcttgcctttgcag 178
             |||||||| |||||||||||||||
Sbjct: 88135 caagcaattatcttgcctttgcag 88112
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>gb|AC006040.3|AC006040 Homo sapiens BAC clone RP11-400O10 from Y, complete sequence
          Length = 186504

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 69     caaggaaaacgaagactcaaaaaa 92
              |||||||||| |||||||||||||
Sbjct: 121897 caaggaaaacaaagactcaaaaaa 121874
to top
>gb|AC153618.4| Mus musculus 6 BAC RP23-5O1 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 204946

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    cctttgcagactgtaaacat 189
              ||||||||||||||||||||
Sbjct: 185664 cctttgcagactgtaaacat 185683
to top
>dbj|AK068475.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152H07, full
            insert sequence
          Length = 4125

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 544  aagccaaatcatccaagcaa 563
            ||||||||||||||||||||
Sbjct: 1337 aagccaaatcatccaagcaa 1318
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>emb|CT009515.16| Mouse DNA sequence from clone RP23-117H6 on chromosome 14, complete
              sequence
          Length = 197196

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 332    agtgctgggatcaactgcat 351
              ||||||||||||||||||||
Sbjct: 162210 agtgctgggatcaactgcat 162191
to top
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 412     caatatcctcaacaacagca 431
               ||||||||||||||||||||
Sbjct: 5088333 caatatcctcaacaacagca 5088352
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>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 412     caatatcctcaacaacagca 431
               ||||||||||||||||||||
Sbjct: 4909595 caatatcctcaacaacagca 4909614
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>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 412     caatatcctcaacaacagca 431
               ||||||||||||||||||||
Sbjct: 4882655 caatatcctcaacaacagca 4882674
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 544     aagccaaatcatccaagcaa 563
               ||||||||||||||||||||
Sbjct: 3363364 aagccaaatcatccaagcaa 3363345
to top
>emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa0041K23 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 137936

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 544   aagccaaatcatccaagcaa 563
             ||||||||||||||||||||
Sbjct: 42472 aagccaaatcatccaagcaa 42453
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>gb|AF041427.1|AF041427 Homo sapiens ribosomal protein s4 Y isoform gene, complete cds
          Length = 45859

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 69    caaggaaaacgaagactcaaaaaa 92
             |||||||||| |||||||||||||
Sbjct: 24173 caaggaaaacaaagactcaaaaaa 24150


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,245,803
Number of Sequences: 3902068
Number of extensions: 6245803
Number of successful extensions: 96879
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96411
Number of HSP's gapped (non-prelim): 459
length of query: 662
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 639
effective length of database: 17,143,297,704
effective search space: 10954567232856
effective search space used: 10954567232856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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