| Clone Name | rbags30n13 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 13 aattaagtgactgaactttgtactaactttagtacaaagtt 53 |||||||||||| |||||| ||||||||||||||||||||| Sbjct: 108657 aattaagtgactcaactttatactaactttagtacaaagtt 108617 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Plus Query: 16 taagtgactgaactttgtactaactttagtacaaagtt 53 ||||||||| ||||||||||||| |||||| |||||| Sbjct: 108607 taagtgactcaactttgtactaaagttagtataaagtt 108644
>gb|AY821694.1| Crithopsis delileana beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1521 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 16 taagtgactgaactttgtactaactttagtacaaagtt 53 |||||| || |||||||||||||||||||||||||||| Sbjct: 1220 taagtgtctcaactttgtactaactttagtacaaagtt 1257 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 26 aactttgtactaactttagtacaaagtt 53 ||||||||||||| ||||||||||||| Sbjct: 1257 aactttgtactaaagttagtacaaagtt 1230
>gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 complete sequence Length = 168746 Score = 60.0 bits (30), Expect = 1e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 20 tgactgaactttgtactaactttagtacaaagtt 53 ||||| |||||||||||||||||||||||||||| Sbjct: 128619 tgactcaactttgtactaactttagtacaaagtt 128652 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Minus Query: 29 tttgtactaactttagtacaaagtt 53 ||||||||||||||||||||||||| Sbjct: 78719 tttgtactaactttagtacaaagtt 78695 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 26 aactttgtactaactttagtacaaagtt 53 ||||||||||||| ||||||||||||| Sbjct: 128652 aactttgtactaaagttagtacaaagtt 128625 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 26 aactttgtactaactttagtacaaagtt 53 ||||||| ||||| |||||||||||||| Sbjct: 78647 aactttgcactaaatttagtacaaagtt 78674 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 26 aactttgtactaactttagtacaaagtt 53 ||||||||||||| |||||| ||||||| Sbjct: 78674 aactttgtactaaatttagtgcaaagtt 78647
>gb|AF325197.1|AF325197 Triticum aestivum LRK33 (Lrk33) and TAK33 (Tak33) genes, complete cds Length = 20754 Score = 60.0 bits (30), Expect = 1e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 20 tgactgaactttgtactaactttagtacaaagtt 53 ||||| |||||||||||||||||||||||||||| Sbjct: 3666 tgactcaactttgtactaactttagtacaaagtt 3699 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 26 aactttgtactaactttagtacaaagtt 53 ||||||||||||| ||||||||||||| Sbjct: 3699 aactttgtactaaagttagtacaaagtt 3672
>gb|AF091802.1|AF091802 Aegilops tauschii starch synthase I gene, complete cds Length = 11387 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 20 tgactgaactttgtactaactttagtacaaagttagta 57 ||||| ||||||||||||||| ||||||||| |||||| Sbjct: 2072 tgactcaactttgtactaactatagtacaaaattagta 2035
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 21 gactgaactttgtactaactttagtacaaagtt 53 |||| ||||||| |||||||||||||||||||| Sbjct: 81539 gactcaactttgcactaactttagtacaaagtt 81507 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Plus Query: 16 taagtgactgaactttgtactaactttagtacaaagtt 53 ||||||||| ||||||||||||| ||||| ||||||| Sbjct: 81497 taagtgactcaactttgtactaaagttagtgcaaagtt 81534 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 26 aactttgtactaactttagtacaaagtt 53 |||||||||||| || |||||||||||| Sbjct: 206051 aactttgtactagctctagtacaaagtt 206078
>gb|AF497474.1| Aegilops tauschii leucine-rich-like protein gene, partial cds; seed globulin (Glo-2) gene, complete cds; HMW-glutenin (Glu-Dty) gene, Glu-Dty-T2 allele, complete cds; and HMW-glutenin (HMW) gene, HMW-Dtx2 allele, complete cds Length = 102842 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Plus Query: 16 taagtgactgaactttgtactaacttta 43 ||||||||| |||||||||||||||||| Sbjct: 66260 taagtgactcaactttgtactaacttta 66287
>gb|AC124798.5| Homo sapiens chromosome 11, clone RP1-239B22, complete sequence Length = 141199 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 174 acacacgcacacacaaaaagactatgc 200 ||||||||||||||||||| ||||||| Sbjct: 43938 acacacgcacacacaaaaacactatgc 43912
>emb|AL450398.9| Human DNA sequence from clone RP11-202P11 on chromosome 10 Contains the 3'end of a novel gene containing FLJ40604 and FLJ40930, complete sequence Length = 55063 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 174 acacacgcacacacaaaaagact 196 ||||||||||||||||||||||| Sbjct: 15655 acacacgcacacacaaaaagact 15633
>gb|AC003969.1|AC003969 Homo sapiens Chromosome 11p14.3 PAC clone pDJ239b22, complete sequence Length = 141190 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 174 acacacgcacacacaaaaagactatgc 200 ||||||||||||||||||| ||||||| Sbjct: 97259 acacacgcacacacaaaaacactatgc 97285
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 44.1 bits (22), Expect = 0.61 Identities = 47/54 (87%), Gaps = 1/54 (1%) Strand = Plus / Plus Query: 1 ctccctcctcccaat-taagtgactgaactttgtactaactttagtacaaagtt 53 |||||||||||||| |||||| || |||||||||||| | |||||||||||| Sbjct: 50400 ctccctcctcccaaaataagtgtctcaactttgtactagttctagtacaaagtt 50453
>gb|AY491681.1| Triticum monococcum DV92 BAC 109N23, complete sequence Length = 101101 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 32 gtactaactttagtacaaagtt 53 |||||||||||||||||||||| Sbjct: 22325 gtactaactttagtacaaagtt 22304
>emb|CR626933.1| Triticum turgidum Length = 25216 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 32 gtactaactttagtacaaagtt 53 |||||||||||||||||||||| Sbjct: 1422 gtactaactttagtacaaagtt 1401
>emb|CR626929.1| Triticum aestivum Length = 20745 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 32 gtactaactttagtacaaagtt 53 |||||||||||||||||||||| Sbjct: 1423 gtactaactttagtacaaagtt 1402
>gb|AE014836.1| Plasmodium falciparum 3D7 chromosome 11 section 1 of 8 of the complete sequence Length = 250743 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 tacggtccaaaggcacccacaa 153 |||||||||||||||||||||| Sbjct: 26884 tacggtccaaaggcacccacaa 26905
>emb|BX004813.5| Zebrafish DNA sequence from clone CH211-55K22 in linkage group 8, complete sequence Length = 148955 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 170 gggaacacacgcacacacaaaa 191 |||||||||||||||||||||| Sbjct: 31677 gggaacacacgcacacacaaaa 31698
>emb|BX005105.6| Zebrafish DNA sequence from clone DKEY-37M8 in linkage group 22, complete sequence Length = 171403 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 56 tagccattagcaatttagcatacagg 81 ||||||||||||||||||||| |||| Sbjct: 168419 tagccattagcaatttagcatccagg 168394
>gb|CP000223.1| Drosophila melanogaster genomic scaffold 211000022280790 Length = 626829 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 484 cagcatatatctatcagcatct 505 |||||||||||||||||||||| Sbjct: 553844 cagcatatatctatcagcatct 553823
>gb|AC005354.1| Homo sapiens chromosome 5, P1 clone 1320c6 (LBNL H59), complete sequence Length = 28065 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 175 cacacgcacacacaaaaagac 195 ||||||||||||||||||||| Sbjct: 367 cacacgcacacacaaaaagac 387
>gb|AC166989.4| Mus musculus BAC clone RP24-345J5 from chromosome 16, complete sequence Length = 232228 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 174 acacacgcacacacaaaaagactat 198 |||||| |||||||||||||||||| Sbjct: 140022 acacacacacacacaaaaagactat 139998
>gb|AY758234.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5b gene, partial cds Length = 4954 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 26 aactttgtactaactttagtacaaagtta 54 |||||||||||| || ||||||||||||| Sbjct: 3856 aactttgtactatctctagtacaaagtta 3828
>gb|AC163741.3| Pan troglodytes BAC clone CH251-406E22 from chromosome unknown, complete sequence Length = 169655 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 acacacgcacacacaaaaaga 194 ||||||||||||||||||||| Sbjct: 70076 acacacgcacacacaaaaaga 70096
>gb|AC145959.3| Gallus gallus chromosome UNK clone CH261-17M10, complete sequence Length = 183075 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 174 acacacgcacacacaaaaagactat 198 |||||| |||||||||||||||||| Sbjct: 127745 acacacacacacacaaaaagactat 127721
>emb|AL022156.2|HS30A23 Human DNA sequence from clone RP6-30A23 on chromosome Xq25 Contains the 5' end of the BIRC4 gene for baculoviral IAP repeat-containing 4, a novel gene and a CpG island, complete sequence Length = 12610 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 174 acacacgcacacacaaaaaga 194 ||||||||||||||||||||| Sbjct: 11579 acacacgcacacacaaaaaga 11559
>gb|AC131886.5| Rattus norvegicus 4 BAC CH230-53A1 (Children's Hospital Oakland Research Institute) complete sequence Length = 222634 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 174 acacacgcacacacaaaaagactat 198 |||||| |||||||||||||||||| Sbjct: 148411 acacacacacacacaaaaagactat 148435
>gb|AC166327.1| Mus musculus BAC clone RP23-175K2 from chromosome 16, complete sequence Length = 188081 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 174 acacacgcacacacaaaaagactat 198 |||||| |||||||||||||||||| Sbjct: 19052 acacacacacacacaaaaagactat 19028
>gb|AC103808.2| Homo sapiens chromosome 18, clone RP11-94B19, complete sequence Length = 152722 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 440 catctttttcttcatataaacattt 464 |||||||||||||| |||||||||| Sbjct: 126754 catctttttcttcaaataaacattt 126778
>gb|AC044784.11| Homo sapiens chromosome 10 clone RP11-428L9, complete sequence Length = 179711 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 423 aaatattttcactgaaacatctttt 447 ||||||||||| ||||||||||||| Sbjct: 30293 aaatattttcagtgaaacatctttt 30269
>gb|AC140035.9| Medicago truncatula clone mth2-25n18, complete sequence Length = 120870 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 444 tttttcttcatataaacattt 464 ||||||||||||||||||||| Sbjct: 86879 tttttcttcatataaacattt 86899
>gb|AC109454.3| Homo sapiens chromosome 5 clone RP11-215P8, complete sequence Length = 142276 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 175 cacacgcacacacaaaaagac 195 ||||||||||||||||||||| Sbjct: 40070 cacacgcacacacaaaaagac 40090
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete sequence Length = 4332241 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 563 cctcacgaattccaatcttct 583 ||||||||||||||||||||| Sbjct: 3761044 cctcacgaattccaatcttct 3761064
>gb|AC011095.5|AC011095 Homo sapiens, clone RP11-1O2, complete sequence Length = 157051 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 440 catctttttcttcatataaacattt 464 |||||||||||||| |||||||||| Sbjct: 4189 catctttttcttcaaataaacattt 4213
>gb|AC093753.2| Homo sapiens BAC clone RP11-50C12 from 4, complete sequence Length = 106383 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 ttggcattaaagggttatttc 238 ||||||||||||||||||||| Sbjct: 58147 ttggcattaaagggttatttc 58167
>dbj|AB125341.2| Staphylococcus warneri plasmid pPI-1 DNA, complete sequence Length = 30201 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 aggcccaagctcaagaatcat 304 ||||||||||||||||||||| Sbjct: 23023 aggcccaagctcaagaatcat 23043
>dbj|AB121757.2| Staphylococcus warneri genes for putative response regulator, NukA, NukM, NukT, NukF, NukE, NukG, NukH, putative plasmid replication-associated protein, putative plasmid replication-associated protein, replication protein, partial and complete cds Length = 11740 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 aggcccaagctcaagaatcat 304 ||||||||||||||||||||| Sbjct: 5700 aggcccaagctcaagaatcat 5720
>gb|AC159218.3| Pan troglodytes BAC clone CH251-59O2 from chromosome unknown, complete sequence Length = 178970 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 174 acacacgcacacacaaaaaga 194 ||||||||||||||||||||| Sbjct: 5579 acacacgcacacacaaaaaga 5559
>dbj|BS000135.1| Pan troglodytes chromosome 22 clone:RP43-114M01, map 22, complete sequences Length = 73133 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 470 gatgaaaatgatcccagcata 490 ||||||||||||||||||||| Sbjct: 27125 gatgaaaatgatcccagcata 27145
>emb|BX470234.8| Zebrafish DNA sequence from clone DKEY-94N12 in linkage group 22, complete sequence Length = 149941 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 acacacgcacacacaaaaaga 194 ||||||||||||||||||||| Sbjct: 141488 acacacgcacacacaaaaaga 141508
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 563 cctcacgaattccaatcttct 583 ||||||||||||||||||||| Sbjct: 512949 cctcacgaattccaatcttct 512929
>gb|AE016830.1| Enterococcus faecalis V583, complete genome Length = 3218031 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 tagcatcaaatattttcactg 436 ||||||||||||||||||||| Sbjct: 1246466 tagcatcaaatattttcactg 1246446
>emb|AL772403.11| Mouse DNA sequence from clone RP23-458E2 on chromosome 4, complete sequence Length = 108612 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 498 cagcatctgctccaactcaat 518 ||||||||||||||||||||| Sbjct: 86692 cagcatctgctccaactcaat 86712
>gb|AC125525.3| Mus musculus BAC clone RP24-395H10 from 1, complete sequence Length = 195904 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 tgaaggccagcaacgggcaag 273 ||||||||||||||||||||| Sbjct: 128698 tgaaggccagcaacgggcaag 128718
>gb|AY886519.1| Homo sapiens baculoviral IAP repeat-containing 4 (BIRC4) gene, complete cds Length = 57320 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 174 acacacgcacacacaaaaaga 194 ||||||||||||||||||||| Sbjct: 12294 acacacgcacacacaaaaaga 12274
>gb|AY887088.1| Hordeum vulgare subsp. vulgare clone BAC 315I20 VRN-H1 (AP1b) pseudogene, partial sequence Length = 4018 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 26 aactttgtactaactttagtacaaagtta 54 |||||||||||| || ||||||||||||| Sbjct: 3904 aactttgtactatctctagtacaaagtta 3876
>gb|AC164095.4| Mus musculus BAC clone RP23-355A22 from chromosome 7, complete sequence Length = 184356 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 498 cagcatctgctccaactcaattgt 521 ||||||||||||||| |||||||| Sbjct: 59807 cagcatctgctccaattcaattgt 59830
>gb|AC103399.9| Mus musculus chromosome 3, clone RP23-310N18, complete sequence Length = 154918 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 caaatattttcactgaaaca 441 |||||||||||||||||||| Sbjct: 129250 caaatattttcactgaaaca 129269
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 aacacacgcacacacaaaaa 192 |||||||||||||||||||| Sbjct: 697532 aacacacgcacacacaaaaa 697513
>gb|AC140783.4| Mus musculus BAC clone RP24-253K16 from chromosome 15, complete sequence Length = 165903 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 ttcatataaacattttcctt 469 |||||||||||||||||||| Sbjct: 92669 ttcatataaacattttcctt 92688
>gb|AC137905.8| Mus musculus chromosome 15, clone RP23-334B11, complete sequence Length = 210548 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 ttcatataaacattttcctt 469 |||||||||||||||||||| Sbjct: 55126 ttcatataaacattttcctt 55145
>emb|BX936415.10| Zebrafish DNA sequence from clone CH211-242N18 in linkage group 6, complete sequence Length = 176089 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aacacacgcacacacaaaaa 192 |||||||||||||||||||| Sbjct: 2136 aacacacgcacacacaaaaa 2155
>gb|AC095032.3| Homo sapiens chromosome 1 clone RP11-153F1, complete sequence Length = 157344 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 tttcactgaaacatcttttt 448 |||||||||||||||||||| Sbjct: 17906 tttcactgaaacatcttttt 17925
>gb|AC102566.9| Mus musculus chromosome 9, clone RP23-223D10, complete sequence Length = 253343 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgggaacacacgcacacaca 188 |||||||||||||||||||| Sbjct: 131861 tgggaacacacgcacacaca 131880
>ref|XM_800492.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508595.11) partial mRNA Length = 363 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 aacacacgcacacacaaaaa 192 |||||||||||||||||||| Sbjct: 59 aacacacgcacacacaaaaa 40
>gb|AC132413.3| Mus musculus BAC clone RP23-375I11 from chromosome 1, complete sequence Length = 191541 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 aacacacgcacacacaaaaa 192 |||||||||||||||||||| Sbjct: 13226 aacacacgcacacacaaaaa 13207
>gb|AC122359.5| Mus musculus BAC clone RP23-421B1 from chromosome 6, complete sequence Length = 194338 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 ctttttcttcatataaacat 462 |||||||||||||||||||| Sbjct: 161548 ctttttcttcatataaacat 161529
>emb|CR450824.9| Zebrafish DNA sequence from clone CH211-147F12 in linkage group 23, complete sequence Length = 170611 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aacacacgcacacacaaaaa 192 |||||||||||||||||||| Sbjct: 148666 aacacacgcacacacaaaaa 148685
>emb|CR759824.9| Zebrafish DNA sequence from clone DKEY-81E3 in linkage group 13, complete sequence Length = 174086 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 acaatttaaagtttttgtct 169 |||||||||||||||||||| Sbjct: 42469 acaatttaaagtttttgtct 42488
>gb|AC122186.2| Mus musculus BAC clone RP23-19M20 from 1, complete sequence Length = 160653 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aacacacgcacacacaaaaa 192 |||||||||||||||||||| Sbjct: 18017 aacacacgcacacacaaaaa 18036
>emb|CR513784.8| Zebrafish DNA sequence from clone CH211-286B4 in linkage group 15, complete sequence Length = 166308 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 631 atgttatgatcacgagtcat 650 |||||||||||||||||||| Sbjct: 130812 atgttatgatcacgagtcat 130831
>emb|BX649201.1| Human DNA sequence from clone RP11-347K2 on chromosome 1 Contains two novel genes, complete sequence Length = 100266 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 tttcactgaaacatcttttt 448 |||||||||||||||||||| Sbjct: 28439 tttcactgaaacatcttttt 28458
>gb|AC183921.2| Pan troglodytes BAC clone CH251-617M1 from chromosome unknown, complete sequence Length = 188195 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 acacacgcacacacaaaaag 193 |||||||||||||||||||| Sbjct: 128815 acacacgcacacacaaaaag 128834
>emb|AL512782.6| Human DNA sequence from clone RP11-464I4 on chromosome 13, complete sequence Length = 186266 Score = 40.1 bits (20), Expect = 9.5 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 502 atctgctccaactcaattgttgtagaaa 529 |||||||||||||||||| ||||||||| Sbjct: 148615 atctgctccaactcaatt-ttgtagaaa 148641
>emb|AL159163.40| Human DNA sequence from clone RP11-514O12 on chromosome 6 Contains the 5' end of a variant of the RPS6KA2 gene for ribosomal protein S6 kinase, 90kD, polypeptide 2 (RSK3), a novel gene, the 3' end of the gene for ribonuclease 6 precursor (RNASE6PL)(FLJ10907) and 2 CpG islands, complete sequence Length = 156938 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 aacacacgcacacacaaaaa 192 |||||||||||||||||||| Sbjct: 85394 aacacacgcacacacaaaaa 85375
>emb|AL139260.19| Human DNA sequence from clone RP5-864K19 on chromosome 1p32.3-34.1 Contains the MYCBP gene for c-myc binding protein, the GJA10 gene for gap junction protein alpha 10, the RHBDL2 gene for rhomboid veinlet-like 2 (Drosophila), a novel gene and the RRAGC gene for Ras-related GTP binding C, complete sequence Length = 155138 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 cacacgcacacacaaaaaga 194 |||||||||||||||||||| Sbjct: 21770 cacacgcacacacaaaaaga 21789
>gb|AC091192.6| Homo sapiens chromosome 8, clone RP11-731N10, complete sequence Length = 175372 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 174 acacacgcacacacaaaaagacta 197 ||||||||||||||||||| |||| Sbjct: 80960 acacacgcacacacaaaaatacta 80983
>emb|AL031680.20|HS850H21 Human DNA sequence from clone RP5-850H21 on chromosome 20q13.11-13.2 Contains the 5' end of the BCAS4 gene for breast carcinoma amplified sequence 4, the PARD6B gene for par-6 partitioning defective 6 homolog beta (C. elegans) and two CpG islands, complete sequence Length = 117431 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 tctttttcttcatataaaca 461 |||||||||||||||||||| Sbjct: 16802 tctttttcttcatataaaca 16821
>emb|Z23164.1|CFFARPA2A C.fasciculata CfaRPA2 gene, complete CDS Length = 1376 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aacacacgcacacacaaaaa 192 |||||||||||||||||||| Sbjct: 363 aacacacgcacacacaaaaa 382
>emb|X64560.1|HVHSP17A H.vulgare hsp17 gene for 17 kd heat shock protein Length = 1515 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 16 taagtgactgaactttgtactaacttta 43 |||||| ||||||||| ||||||||||| Sbjct: 150 taagtgtctgaactttatactaacttta 177
>emb|AL929356.1|PFA929356 Plasmodium falciparum strain 3D7, chromosome 9; segment 2/5 Length = 335050 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 446 tttcttcatataaacattttcctt 469 ||||||||||||||| |||||||| Sbjct: 175912 tttcttcatataaactttttcctt 175889
>emb|AL663115.11| Mouse DNA sequence from clone RP23-452C23 on chromosome 11 Contains the gene for a novel protein simialr to cell division cycle associated 4 Cdca4, a ribosomal protein L15 (Rpl15) pseudogene, the 3' end of a novel gene and two CpG islands, complete sequence Length = 183089 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 acacacgcacacacaaaaag 193 |||||||||||||||||||| Sbjct: 46534 acacacgcacacacaaaaag 46515
>emb|AL596125.27| Mouse DNA sequence from clone RP23-5O23 on chromosome 11 Contains the Chd3 gene for chromodomain helicase DNA binding protein 3, five novel genes, the 3' end of the gene for a novel protein similar to dynein and four CpG islands, complete sequence Length = 165212 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 acacgcacacacaaaaagac 195 |||||||||||||||||||| Sbjct: 93432 acacgcacacacaaaaagac 93413
>emb|AL604031.10| Mouse DNA sequence from clone RP23-24O5 on chromosome 11 Contains a ribosomal protein L13 (Rpl13) pseudogene, a novel gene and two CpG islands, complete sequence Length = 215675 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 ctgaaacatctttttcttca 453 |||||||||||||||||||| Sbjct: 73051 ctgaaacatctttttcttca 73032
>emb|AL606444.3|OSJN00019 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L09, complete sequence Length = 159502 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 attagcaatttagcatacag 80 |||||||||||||||||||| Sbjct: 78309 attagcaatttagcatacag 78328
>gb|AC087417.27| Mus musculus strain C57BL/6J chromosome 2 clone rp23-382b13, complete sequence Length = 225248 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 165 tgtctgggaacacacgcacacaca 188 ||||| |||||||||||||||||| Sbjct: 134150 tgtctaggaacacacgcacacaca 134127
>emb|CR854952.6| Zebrafish DNA sequence from clone CH211-106K4 in linkage group 16, complete sequence Length = 27425 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 aacacacgcacacacaaaaa 192 |||||||||||||||||||| Sbjct: 11638 aacacacgcacacacaaaaa 11619
>emb|CR848794.6| Zebrafish DNA sequence from clone DKEYP-11C8 in linkage group 5, complete sequence Length = 108725 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 168 ctgggaacacacgcacacacaaaa 191 |||||||||||| ||||||||||| Sbjct: 56124 ctgggaacacacacacacacaaaa 56101
>emb|CR352302.9| Zebrafish DNA sequence from clone DKEY-260C5 in linkage group 19, complete sequence Length = 146664 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gggaacacacgcacacacaa 189 |||||||||||||||||||| Sbjct: 125256 gggaacacacgcacacacaa 125237
>gb|AC118660.5| Homo sapiens chromosome 15, clone RP11-631H11, complete sequence Length = 167851 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 agccattagcaatttagcat 76 |||||||||||||||||||| Sbjct: 11954 agccattagcaatttagcat 11935
>dbj|AP001625.1| Homo sapiens genomic DNA, chromosome 21, clone:KB907F12, MX1-D21S171 region, complete sequence Length = 130626 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 gatgaaaatgatcccagcat 489 |||||||||||||||||||| Sbjct: 96393 gatgaaaatgatcccagcat 96412
>gb|AC182390.3| Pan troglodytes BAC clone CH251-614D4 from chromosome 17, complete sequence Length = 197192 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 174 acacacgcacacacaaaaagacta 197 |||||| ||||||||||||||||| Sbjct: 46805 acacacacacacacaaaaagacta 46782
>gb|AC010008.5| Drosophila melanogaster 3L BAC RP98-13N15 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 158719 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 456 taaacattttccttgatgaaaatg 479 ||||||||||||| |||||||||| Sbjct: 21406 taaacattttcctcgatgaaaatg 21383
>gb|AC093436.2| Drosophila melanogaster 3L BAC RP98-1O14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163711 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 456 taaacattttccttgatgaaaatg 479 ||||||||||||| |||||||||| Sbjct: 54330 taaacattttcctcgatgaaaatg 54307
>gb|AC024258.9| Homo sapiens chromosome 10 clone RP11-297N15, complete sequence Length = 160658 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 tttcttcatataaacatttt 465 |||||||||||||||||||| Sbjct: 44089 tttcttcatataaacatttt 44070
>gb|AC007109.7| Arabidopsis thaliana chromosome 2 clone T13C7 map mi148, complete sequence Length = 52784 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 ttagtagccattagcaattt 71 |||||||||||||||||||| Sbjct: 24550 ttagtagccattagcaattt 24531
>gb|AC079795.6| Homo sapiens BAC clone RP11-610P16 from 4, complete sequence Length = 110185 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 657 aatacagataggatctaaat 676 |||||||||||||||||||| Sbjct: 64110 aatacagataggatctaaat 64091
>gb|AC090281.8| Homo sapiens chromosome 8, clone RP5-1009N12, complete sequence Length = 114875 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 cacacgcacacacaaaaaga 194 |||||||||||||||||||| Sbjct: 68113 cacacgcacacacaaaaaga 68094
>gb|AC008066.4| Homo sapiens BAC clone RP11-293D9 from 8, complete sequence Length = 174347 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 cacacgcacacacaaaaaga 194 |||||||||||||||||||| Sbjct: 113985 cacacgcacacacaaaaaga 114004
>gb|AC091223.2| Drosophila melanogaster 3L BAC RP98-48G6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170988 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 456 taaacattttccttgatgaaaatg 479 ||||||||||||| |||||||||| Sbjct: 167880 taaacattttcctcgatgaaaatg 167857
>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome Length = 2174500 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 ttttcttcatataaacattt 464 |||||||||||||||||||| Sbjct: 1025529 ttttcttcatataaacattt 1025510
>dbj|AK084552.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330014H01 product:hypothetical protein, full insert sequence Length = 4211 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 acacgcacacacaaaaagac 195 |||||||||||||||||||| Sbjct: 729 acacgcacacacaaaaagac 748
>gb|DP000030.1| Sus scrofa target 116 genomic scaffold Length = 380805 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 acacacgcacacacaaaaag 193 |||||||||||||||||||| Sbjct: 299509 acacacgcacacacaaaaag 299490
>gb|AC005476.4|AC005476 Homo sapiens PAC clone RP1-261D10 from 14q24.3, complete sequence Length = 107731 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 659 tacagataggatctaaatgt 678 |||||||||||||||||||| Sbjct: 98485 tacagataggatctaaatgt 98466
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 attagcaatttagcatacag 80 |||||||||||||||||||| Sbjct: 32308726 attagcaatttagcatacag 32308745
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 aaatattttcactgaaacat 442 |||||||||||||||||||| Sbjct: 24362173 aaatattttcactgaaacat 24362154
>gb|AC025281.8| Homo sapiens chromosome 16 clone RP11-356O24, complete sequence Length = 193261 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 atagcatcaaatattttcac 434 |||||||||||||||||||| Sbjct: 27055 atagcatcaaatattttcac 27074
>gb|AC010317.5| Homo sapiens chromosome 5 clone CTB-88J14, complete sequence Length = 149115 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 acacacgcacacacaaaaag 193 |||||||||||||||||||| Sbjct: 37472 acacacgcacacacaaaaag 37491
>gb|AC016717.8| Homo sapiens BAC clone RP11-314B1 from 2, complete sequence Length = 210558 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aacacacgcacacacaaaaa 192 |||||||||||||||||||| Sbjct: 114012 aacacacgcacacacaaaaa 114031
>gb|AC012361.10| Homo sapiens BAC clone RP11-348P18 from 2, complete sequence Length = 207184 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 174 acacacgcacacacaaaaagacta 197 |||||| ||||||||||||||||| Sbjct: 195520 acacacacacacacaaaaagacta 195497
>gb|AC132812.9| Homo sapiens chromosome 17, clone RP13-104F24, complete sequence Length = 161139 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 174 acacacgcacacacaaaaagacta 197 |||||| ||||||||||||||||| Sbjct: 85768 acacacacacacacaaaaagacta 85791
>gb|AF446141.1| Aegilops tauschii LZ-NBS-LRR class RGA, NBS-LRR class RGA, HCBT-like putative defense response protein, and putative alliin lyase genes, complete cds; and unknown genes Length = 106618 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 26 aactttgtactaactttagtacaaagtt 53 |||||||||| || |||||||||||||| Sbjct: 49099 aactttgtacaaagtttagtacaaagtt 49072
>emb|BX649513.4| Mouse DNA sequence from clone RP23-139J7 on chromosome 2, complete sequence Length = 27122 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 165 tgtctgggaacacacgcacacaca 188 ||||| |||||||||||||||||| Sbjct: 11820 tgtctaggaacacacgcacacaca 11843
>dbj|BS000068.1| Pan troglodytes chromosome 22 clone:RP43-046F21, map 22, complete sequences Length = 163689 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 attttcactgaaacatcttt 446 |||||||||||||||||||| Sbjct: 135602 attttcactgaaacatcttt 135583
>emb|BX004983.8| Zebrafish DNA sequence from clone DKEY-7F3, complete sequence Length = 234489 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aacacacgcacacacaaaaa 192 |||||||||||||||||||| Sbjct: 39062 aacacacgcacacacaaaaa 39081
>emb|AL845357.6| Zebrafish DNA sequence from clone DKEY-202M22 in linkage group 20, complete sequence Length = 221012 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 acacacgcacacacaaaaag 193 |||||||||||||||||||| Sbjct: 81161 acacacgcacacacaaaaag 81142
>dbj|AK073678.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050J03, full insert sequence Length = 1498 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 aaatattttcactgaaacat 442 |||||||||||||||||||| Sbjct: 1331 aaatattttcactgaaacat 1350
>gb|AC102279.18| Mus musculus chromosome 7, clone RP24-302P2, complete sequence Length = 170100 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 498 cagcatctgctccaactcaattgt 521 ||||||||||||||| |||||||| Sbjct: 117402 cagcatctgctccaattcaattgt 117425
>emb|BX248090.11| Zebrafish DNA sequence from clone DKEY-156K12 in linkage group 20, complete sequence Length = 212314 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aacacacgcacacacaaaaa 192 |||||||||||||||||||| Sbjct: 72397 aacacacgcacacacaaaaa 72416
>emb|BX323837.7| Zebrafish DNA sequence from clone DKEY-5N7 in linkage group 18, complete sequence Length = 228251 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 acacacgcacacacaaaaag 193 |||||||||||||||||||| Sbjct: 132684 acacacgcacacacaaaaag 132665
>emb|BX000468.5| Zebrafish DNA sequence from clone DKEY-1J5 in linkage group 20, complete sequence Length = 208583 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 ttaaagtttttgtctgggaa 174 |||||||||||||||||||| Sbjct: 50003 ttaaagtttttgtctgggaa 50022
>emb|AL732338.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0315F07, complete sequence Length = 73187 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 attagcaatttagcatacag 80 |||||||||||||||||||| Sbjct: 23663 attagcaatttagcatacag 23682
>emb|AL732333.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0613A10, complete sequence Length = 77572 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 attagcaatttagcatacag 80 |||||||||||||||||||| Sbjct: 74555 attagcaatttagcatacag 74574
>gb|AE003540.3| Drosophila melanogaster chromosome 3L, section 45 of 83 of the complete sequence Length = 297381 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 456 taaacattttccttgatgaaaatg 479 ||||||||||||| |||||||||| Sbjct: 22556 taaacattttcctcgatgaaaatg 22533
>dbj|AP001747.1| Homo sapiens genomic DNA, chromosome 21q, section 91/105 Length = 340000 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 gatgaaaatgatcccagcat 489 |||||||||||||||||||| Sbjct: 72546 gatgaaaatgatcccagcat 72565
>dbj|AP001681.1| Homo sapiens genomic DNA, chromosome 21q, section 25/105 Length = 340000 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 attttcactgaaacatcttt 446 |||||||||||||||||||| Sbjct: 108926 attttcactgaaacatcttt 108907
>dbj|AP001252.2| Homo sapiens genomic DNA, chromosome 21q, clone:RP11-636L7, complete sequence Length = 91242 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 attttcactgaaacatcttt 446 |||||||||||||||||||| Sbjct: 64014 attttcactgaaacatcttt 63995
>emb|BX284680.6| Mouse DNA sequence from clone RP23-260E20 on chromosome X, complete sequence Length = 168173 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 498 cagcatctgctccaactcaattgt 521 ||||||||||||||| |||||||| Sbjct: 97444 cagcatctgctccaattcaattgt 97467
>emb|AL935264.12| Mouse DNA sequence from clone RP23-118A9 on chromosome 4, complete sequence Length = 230886 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 tgggaacacacgcacacaca 188 |||||||||||||||||||| Sbjct: 31153 tgggaacacacgcacacaca 31134
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 aaatattttcactgaaacat 442 |||||||||||||||||||| Sbjct: 24290379 aaatattttcactgaaacat 24290360
>emb|AL772423.4|CNS08CA1 Oryza sativa chromosome 12, . BAC OJ1058_H10 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 103803 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 aaatattttcactgaaacat 442 |||||||||||||||||||| Sbjct: 25705 aaatattttcactgaaacat 25686
>emb|CT025664.5| Mouse DNA sequence from clone RP24-174I18 on chromosome 9, complete sequence Length = 163813 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tgggaacacacgcacacaca 188 |||||||||||||||||||| Sbjct: 27843 tgggaacacacgcacacaca 27862
>emb|AL845367.6| Zebrafish DNA sequence from clone DKEYP-33D4 in linkage group 20, complete sequence Length = 104646 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 acacacgcacacacaaaaag 193 |||||||||||||||||||| Sbjct: 28276 acacacgcacacacaaaaag 28295
>emb|AL590523.5| Human DNA sequence from clone RP11-565G5 on chromosome 22, complete sequence Length = 155397 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 cacgcacacacaaaaagact 196 |||||||||||||||||||| Sbjct: 49867 cacgcacacacaaaaagact 49886
>emb|AL121989.12|HSDJ604K5 Human DNA sequence from clone RP4-604K5 on chromosome 1p22.2-31.1. Contains a gene for a 15 kDa selenoprotein and a part of the heparan sulfate 2-sulfotransferase gene (KIAA0448). Contains ESTs, STSs, GSSs and CpG islands, complete sequence Length = 127201 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 aacacacgcacacacaaaaagact 196 ||||||| |||||||||||||||| Sbjct: 90482 aacacacacacacacaaaaagact 90459
>dbj|AP001626.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1559F8, MX1-D21S171 region, complete sequence Length = 145762 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 gatgaaaatgatcccagcat 489 |||||||||||||||||||| Sbjct: 5632 gatgaaaatgatcccagcat 5651
>emb|AL805895.4| Mouse DNA sequence from clone RP23-64K11 on chromosome 4, complete sequence Length = 154245 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 649 attctctcaatacagatagg 668 |||||||||||||||||||| Sbjct: 62188 attctctcaatacagatagg 62207 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,731,756 Number of Sequences: 3902068 Number of extensions: 7731756 Number of successful extensions: 232696 Number of sequences better than 10.0: 126 Number of HSP's better than 10.0 without gapping: 124 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 231896 Number of HSP's gapped (non-prelim): 801 length of query: 693 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 670 effective length of database: 17,143,297,704 effective search space: 11486009461680 effective search space used: 11486009461680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)