ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags31c11 |
|---|---|
| Clone Library Name | barley_pub |
>MPPA_SOLTU (P29677) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (Ubiquinol-cytochrome-c reductase subunit II) (EC 1.10.2.2) Length = 504 Score = 141 bits (355), Expect = 2e-33 Identities = 66/126 (52%), Positives = 94/126 (74%) Frame = -2 Query: 713 FGIHASTDAAFVPKVIDLAARELTSLXTPGQVDQTQLDRAKASAKSVILRNLESKASTTE 534 FGI +T + F P+ +D+A +EL ++ P +VDQ QL+RAK + KS IL NLES+ +E Sbjct: 379 FGIQGTTSSDFGPQAVDVAVKELIAVANPSEVDQVQLNRAKQATKSAILMNLESRMVASE 438 Query: 533 DMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVPAYETVR 354 D+GRQ L +GER PVE LKA+DA++ D+++V K+ISSPLTMAS+G+VLS+P+Y+ V Sbjct: 439 DIGRQLLTYGERNPVEHFLKAIDAVSAKDIASVVQKLISSPLTMASYGDVLSLPSYDAVS 498 Query: 353 GKFSSK 336 +F SK Sbjct: 499 SRFRSK 504
>MPPA1_ARATH (Q9ZU25) Probable mitochondrial-processing peptidase alpha subunit| 1, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP 1) Length = 503 Score = 130 bits (326), Expect = 5e-30 Identities = 64/123 (52%), Positives = 88/123 (71%) Frame = -2 Query: 713 FGIHASTDAAFVPKVIDLAARELTSLXTPGQVDQTQLDRAKASAKSVILRNLESKASTTE 534 FGI+ + F K I+LAA+EL + G+V+Q LDRAKA+ KS +L NLES+ E Sbjct: 381 FGIYGCSSPQFAAKAIELAAKELKDVAG-GKVNQAHLDRAKAATKSAVLMNLESRMIAAE 439 Query: 533 DMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVPAYETVR 354 D+GRQ L +GERKPV+Q LK+VD +TL D++ +K+IS PLTM S G+VL+VP+Y+T+ Sbjct: 440 DIGRQILTYGERKPVDQFLKSVDQLTLKDIADFTSKVISKPLTMGSFGDVLAVPSYDTIS 499 Query: 353 GKF 345 KF Sbjct: 500 SKF 502
>MPPA2_ARATH (O04308) Probable mitochondrial-processing peptidase alpha subunit| 2, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP 2) Length = 499 Score = 122 bits (306), Expect = 1e-27 Identities = 61/123 (49%), Positives = 87/123 (70%) Frame = -2 Query: 713 FGIHASTDAAFVPKVIDLAARELTSLXTPGQVDQTQLDRAKASAKSVILRNLESKASTTE 534 FGI+ T F + I+L A E+ ++ G+V+Q LDRAKA+ KS IL NLES+ E Sbjct: 377 FGIYGCTSPEFASQGIELVASEMNAVAD-GKVNQKHLDRAKAATKSAILMNLESRMIAAE 435 Query: 533 DMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVPAYETVR 354 D+GRQ L +GERKPV+Q LK VD +TL D++ +K+I+ PLTMA+ G+VL+VP+Y++V Sbjct: 436 DIGRQILTYGERKPVDQFLKTVDQLTLKDIADFTSKVITKPLTMATFGDVLNVPSYDSVS 495 Query: 353 GKF 345 +F Sbjct: 496 KRF 498
>MPPA_PONPY (Q5R513) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) Length = 525 Score = 75.1 bits (183), Expect = 2e-13 Identities = 43/126 (34%), Positives = 70/126 (55%) Frame = -2 Query: 707 IHASTDAAFVPKVIDLAARELTSLXTPGQVDQTQLDRAKASAKSVILRNLESKASTTEDM 528 IHAS D V +++++ +E + G VD +L+RAK S+++ NLES+ ED+ Sbjct: 392 IHASADPRQVREMVEIITKEFILMS--GTVDAVELERAKTQLTSMLMMNLESRPVIFEDV 449 Query: 527 GRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVPAYETVRGK 348 GRQ LA RK +L + + DV VA+K++ +A+ G++ +P YE ++ Sbjct: 450 GRQVLATRSRKLPHELCTLIRNVKPEDVKRVASKMLRGKPAVAALGDLTDLPTYEHIQTA 509 Query: 347 FSSK*G 330 SSK G Sbjct: 510 LSSKDG 515
>MPPA_HUMAN (Q10713) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (P-55) Length = 525 Score = 74.7 bits (182), Expect = 3e-13 Identities = 43/126 (34%), Positives = 70/126 (55%) Frame = -2 Query: 707 IHASTDAAFVPKVIDLAARELTSLXTPGQVDQTQLDRAKASAKSVILRNLESKASTTEDM 528 IHAS D V +++++ +E + G VD +L+RAK S+++ NLES+ ED+ Sbjct: 392 IHASADPRQVREMVEIITKEFILMG--GTVDTVELERAKTQLTSMLMMNLESRPVIFEDV 449 Query: 527 GRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVPAYETVRGK 348 GRQ LA RK +L + + DV VA+K++ +A+ G++ +P YE ++ Sbjct: 450 GRQVLATRSRKLPHELCTLIRNVKPEDVKRVASKMLRGKPAVAALGDLTDLPTYEHIQTA 509 Query: 347 FSSK*G 330 SSK G Sbjct: 510 LSSKDG 515
>MPPA_RAT (P20069) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (P-55) Length = 524 Score = 70.9 bits (172), Expect = 4e-12 Identities = 40/126 (31%), Positives = 69/126 (54%) Frame = -2 Query: 707 IHASTDAAFVPKVIDLAARELTSLXTPGQVDQTQLDRAKASAKSVILRNLESKASTTEDM 528 IHAS D V +++++ +E + VD +L+RAK S+++ NLES+ ED+ Sbjct: 391 IHASADPRQVREMVEIITKEFILMGRT--VDLVELERAKTQLMSMLMMNLESRPVIFEDV 448 Query: 527 GRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVPAYETVRGK 348 GRQ LA RK +L + + D+ VA+K++ +A+ G++ +P YE ++ Sbjct: 449 GRQVLATHSRKLPHELCTLIRNVKPEDIKRVASKMLRGKPAVAALGDLTDLPTYEHIQAA 508 Query: 347 FSSK*G 330 SS+ G Sbjct: 509 LSSRDG 514
>MPPA_MOUSE (Q9DC61) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (P-55) Length = 524 Score = 70.9 bits (172), Expect = 4e-12 Identities = 40/126 (31%), Positives = 69/126 (54%) Frame = -2 Query: 707 IHASTDAAFVPKVIDLAARELTSLXTPGQVDQTQLDRAKASAKSVILRNLESKASTTEDM 528 IHAS D V +++++ +E + VD +L+RAK S+++ NLES+ ED+ Sbjct: 391 IHASADPRQVREMVEIITKEFILMGRT--VDLVELERAKTQLMSMLMMNLESRPVIFEDV 448 Query: 527 GRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVPAYETVRGK 348 GRQ LA RK +L + + D+ VA+K++ +A+ G++ +P YE ++ Sbjct: 449 GRQVLATHSRKLPHELCTLIRNVKPEDIKRVASKMLRGKPAVAALGDLTDLPTYEHIQAA 508 Query: 347 FSSK*G 330 SS+ G Sbjct: 509 LSSRNG 514
>MPPA_BLAEM (P97997) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) Length = 474 Score = 63.9 bits (154), Expect = 5e-10 Identities = 39/112 (34%), Positives = 61/112 (54%) Frame = -2 Query: 713 FGIHASTDAAFVPKVIDLAARELTSLXTPGQVDQTQLDRAKASAKSVILRNLESKASTTE 534 FGI AS +F P + ++ A E + + ++ RAK KS +L NLES+ T E Sbjct: 332 FGISASCVPSFNPHLCNVLAGEFVHMAR--NLSDEEVARAKNQLKSSLLMNLESQVITVE 389 Query: 533 DMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLS 378 D+GRQ LA +R +L+ + A+T D+ VA +++ P TM + G L+ Sbjct: 390 DIGRQVLAQNQRLEPLELVNNISAVTRDDLVRVAEALVAKPPTMVAVGEDLT 441
>MPPA_YEAST (P11914) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) Length = 482 Score = 63.5 bits (153), Expect = 6e-10 Identities = 38/125 (30%), Positives = 64/125 (51%), Gaps = 2/125 (1%) Frame = -2 Query: 713 FGIHASTDAAFVPKVIDLAAREL--TSLXTPGQVDQTQLDRAKASAKSVILRNLESKAST 540 FGI S P+ +++ A+++ T ++ + ++ RAK KS +L NLESK Sbjct: 329 FGISLSCIPQAAPQAVEVIAQQMYNTFANKDLRLTEDEVSRAKNQLKSSLLMNLESKLVE 388 Query: 539 TEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVPAYET 360 EDMGRQ L G + PV +++ ++ + D+S VA I + + A +G + + Sbjct: 389 LEDMGRQVLMHGRKIPVNEMISKIEDLKPDDISRVAEMIFTGNVNNAGNGKGRATVVMQG 448 Query: 359 VRGKF 345 RG F Sbjct: 449 DRGSF 453
>MPPA_NEUCR (P23955) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) Length = 577 Score = 58.9 bits (141), Expect = 1e-08 Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 3/112 (2%) Frame = -2 Query: 713 FGIHASTDAAFVPKVIDLAARELTSLXTP---GQVDQTQLDRAKASAKSVILRNLESKAS 543 FGI AS ++ + REL +L T + + ++ RAK +S +L NLES+ Sbjct: 429 FGIAASCYPGRTLPMLQVMCRELHALTTDHGYSALGELEVSRAKNQLRSSLLMNLESRMV 488 Query: 542 TTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGN 387 ED+GRQ G + PV ++ + ++ +T+ D+ VA +++ A G+ Sbjct: 489 ELEDLGRQVQVHGRKIPVREMTRRINELTVKDLRRVAKRVVGGMANNAGQGS 540
>UQCR2_HUMAN (P22695) Ubiquinol-cytochrome-c reductase complex core protein 2,| mitochondrial precursor (EC 1.10.2.2) (Complex III subunit II) Length = 453 Score = 58.2 bits (139), Expect = 3e-08 Identities = 34/114 (29%), Positives = 57/114 (50%) Frame = -2 Query: 713 FGIHASTDAAFVPKVIDLAARELTSLXTPGQVDQTQLDRAKASAKSVILRNLESKASTTE 534 FGI+ + A VI A ++ ++ G + T + AK K+ L ++ES E Sbjct: 336 FGIYTISQATAAGDVIKAAYNQVKTIAQ-GNLSNTDVQAAKNKLKAGYLMSVESSECFLE 394 Query: 533 DMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVP 372 ++G QAL G P +L+ +D++ AD+ A K +S +MA+ GN+ P Sbjct: 395 EVGSQALVAGSYMPPSTVLQQIDSVANADIINAAKKFVSGQKSMAASGNLGHTP 448
>UQCR2_MOUSE (Q9DB77) Ubiquinol-cytochrome-c reductase complex core protein 2,| mitochondrial precursor (EC 1.10.2.2) (Complex III subunit II) Length = 453 Score = 57.4 bits (137), Expect = 4e-08 Identities = 34/114 (29%), Positives = 59/114 (51%) Frame = -2 Query: 713 FGIHASTDAAFVPKVIDLAARELTSLXTPGQVDQTQLDRAKASAKSVILRNLESKASTTE 534 FGI+ + AA +VI+ A ++ ++ G + + AK K+ L ++E+ Sbjct: 336 FGIYTISQAAAAGEVINAAYNQVKAVAQ-GNLSSADVQAAKNKLKAGYLMSVETSEGFLS 394 Query: 533 DMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVP 372 ++G QALA G P +L+ +D++ ADV A K +S +MA+ GN+ P Sbjct: 395 EIGSQALAAGSYMPPSTVLQQIDSVADADVVKAAKKFVSGKKSMAASGNLGHTP 448
>UQCR2_BOVIN (P23004) Ubiquinol-cytochrome-c reductase complex core protein 2,| mitochondrial precursor (EC 1.10.2.2) (Complex III subunit II) Length = 453 Score = 57.4 bits (137), Expect = 4e-08 Identities = 35/114 (30%), Positives = 57/114 (50%) Frame = -2 Query: 713 FGIHASTDAAFVPKVIDLAARELTSLXTPGQVDQTQLDRAKASAKSVILRNLESKASTTE 534 FG + + AA VI A ++ ++ G + + AK K+ L ++ES + Sbjct: 336 FGFYTISQAASAGDVIKAAYNQVKTIAQ-GNLSNPDVQAAKNKLKAGYLMSVESSEGFLD 394 Query: 533 DMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVP 372 ++G QALA G P +L+ +DA+ ADV A K +S +MA+ GN+ P Sbjct: 395 EVGSQALAAGSYTPPSTVLQQIDAVADADVINAAKKFVSGRKSMAASGNLGHTP 448
>MPPB_YEAST (P10507) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (PEP) Length = 462 Score = 56.6 bits (135), Expect = 7e-08 Identities = 29/96 (30%), Positives = 55/96 (57%), Gaps = 1/96 (1%) Frame = -2 Query: 626 GQVDQTQLDRAKASAKSVILRNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLAD 447 G++ +++RAKA K+ +L +L+ + ED+GRQ + G+R E++ + VD IT D Sbjct: 366 GKISDAEVNRAKAQLKAALLLSLDGSTAIVEDIGRQVVTTGKRLSPEEVFEQVDKITKDD 425 Query: 446 VSTVA-AKIISSPLTMASHGNVLSVPAYETVRGKFS 342 + A ++ + P++M + GN +VP + K + Sbjct: 426 IIMWANYRLQNKPVSMVALGNTSTVPNVSYIEEKLN 461
>UQCR2_RAT (P32551) Ubiquinol-cytochrome-c reductase complex core protein 2,| mitochondrial precursor (EC 1.10.2.2) (Complex III subunit II) Length = 452 Score = 56.6 bits (135), Expect = 7e-08 Identities = 34/114 (29%), Positives = 58/114 (50%) Frame = -2 Query: 713 FGIHASTDAAFVPKVIDLAARELTSLXTPGQVDQTQLDRAKASAKSVILRNLESKASTTE 534 FGI+ + AA VI+ A ++ ++ G + + AK K+ L ++E+ Sbjct: 335 FGIYTVSQAAAAGDVINAAYNQVKAVAQ-GNLSSADVQAAKNKLKAGYLMSVETSEGFLS 393 Query: 533 DMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVP 372 ++G QALA G P +L+ +DA+ ADV A K +S +M + GN+ + P Sbjct: 394 EIGSQALATGSYMPPPTVLQQIDAVADADVVKAAKKFVSGKKSMTASGNLGNTP 447
>MPPB_NEUCR (P11913) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (Ubiquinol-cytochrome-c reductase complex core protein I) (EC 1.10.2.2) Length = 476 Score = 56.2 bits (134), Expect = 1e-07 Identities = 37/126 (29%), Positives = 67/126 (53%), Gaps = 2/126 (1%) Frame = -2 Query: 713 FGIHASTDAAF-VPKVIDLAARELTSLXTPGQVDQTQLDRAKASAKSVILRNLESKASTT 537 +GI+ TD V ++ + RE T L + V + +++RAKA K+ IL +L+ + Sbjct: 349 WGIYLVTDKLDRVDDLVHFSLREWTRLCS--NVSEAEVERAKAQLKASILLSLDGTTAVA 406 Query: 536 EDMGRQALAFGERKPVEQLLKAVDAITLADVSTVA-AKIISSPLTMASHGNVLSVPAYET 360 ED+GRQ + G R ++ + +DA++ DV A KI + +++ G++ + Y Sbjct: 407 EDIGRQIVTTGRRMSPAEIERIIDAVSAKDVMDFANKKIWDQDIAISAVGSIEGLFDYAR 466 Query: 359 VRGKFS 342 +RG S Sbjct: 467 IRGDMS 472
>MPPB_LENED (Q9Y8B5) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) Length = 466 Score = 55.8 bits (133), Expect = 1e-07 Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 1/91 (1%) Frame = -2 Query: 608 QLDRAKASAKSVILRNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAA 429 +++RAK+ K+ +L +L+ + ED+GRQ + G+R Q+ AVDA+++ D+ VA Sbjct: 373 EVERAKSQLKAGLLLSLDGTTAVAEDIGRQIVTSGKRMTPAQIENAVDAVSVDDIKRVAQ 432 Query: 428 KII-SSPLTMASHGNVLSVPAYETVRGKFSS 339 K + +A+ GN+ + Y +R SS Sbjct: 433 KYLWDKDFALAAFGNIDGLKDYGRIRNDMSS 463
>MPPB_ARATH (Q42290) Probable mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) Length = 531 Score = 53.9 bits (128), Expect = 5e-07 Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 1/121 (0%) Frame = -2 Query: 713 FGIHASTDAAFVPKVIDLAARELTSLXTPGQVDQTQLDRAKASAKSVILRNLESKASTTE 534 FG++A A + + E+T L +V + RA+ KS +L +++ + E Sbjct: 405 FGVYAVAKADCLDDLSYAIMYEVTKLAY--RVSDADVTRARNQLKSSLLLHMDGTSPIAE 462 Query: 533 DMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAK-IISSPLTMASHGNVLSVPAYETV 357 D+GRQ L +G R P +L +DA+ + V VA K I + +++ G + +P Y Sbjct: 463 DIGRQLLTYGRRIPTAELFARIDAVDASTVKRVANKYIYDKDIAISAIGPIQDLPDYNKF 522 Query: 356 R 354 R Sbjct: 523 R 523
>MPPB_HUMAN (O75439) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (P-52) Length = 489 Score = 48.5 bits (114), Expect = 2e-05 Identities = 31/122 (25%), Positives = 63/122 (51%), Gaps = 2/122 (1%) Frame = -2 Query: 713 FGIHASTDAAFVPKVIDLAARELTSLXTPGQVDQTQLDRAKASAKSVILRNLESKASTTE 534 +G++ +++ V ++ + +E L T V ++++ RA+ K+ +L L+ E Sbjct: 363 WGLYMVCESSTVADMLHVVQKEWMRLCT--SVTESEVARARNLLKTNMLLQLDGSTPICE 420 Query: 533 DMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKII--SSPLTMASHGNVLSVPAYET 360 D+GRQ L + R P+ +L +DA+ + V K I SP +A+ G + +P ++ Sbjct: 421 DIGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSP-AIAAVGPIKQLPDFKQ 479 Query: 359 VR 354 +R Sbjct: 480 IR 481
>MPPB_SCHPO (Q9P7X1) Probable mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (PEP) Length = 457 Score = 48.1 bits (113), Expect = 3e-05 Identities = 26/92 (28%), Positives = 53/92 (57%), Gaps = 1/92 (1%) Frame = -2 Query: 614 QTQLDRAKASAKSVILRNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTV 435 + +++RAKA ++ +L +L+S + ED+GRQ L G R +++ + IT DV+ V Sbjct: 362 RAEVERAKAQLRASLLLSLDSTTAIAEDIGRQLLTTGRRMSPQEVDLRIGQITEKDVARV 421 Query: 434 AAKII-SSPLTMASHGNVLSVPAYETVRGKFS 342 A+++I + +++ G++ + Y +R S Sbjct: 422 ASEMIWDKDIAVSAVGSIEGLLDYNRIRSSIS 453
>MPPB_BOVIN (Q3SZ71) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) Length = 490 Score = 47.8 bits (112), Expect = 3e-05 Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 2/121 (1%) Frame = -2 Query: 713 FGIHASTDAAFVPKVIDLAARELTSLXTPGQVDQTQLDRAKASAKSVILRNLESKASTTE 534 +GI+ + A V ++ + +E L T V ++++ RAK K+ +L L+ E Sbjct: 364 WGIYMVCEPATVADMLHVVQKEWMRLCT--SVTESEVARAKNLLKTNMLLQLDGSTPICE 421 Query: 533 DMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKII--SSPLTMASHGNVLSVPAYET 360 D+GRQ L + R P+ +L +DA+ + V K I SP +A+ G + +P + Sbjct: 422 DIGRQMLCYNRRIPIPELEARIDAVNAEIIREVCTKYIYDKSP-AVAAVGPIEQLPDFNQ 480 Query: 359 V 357 + Sbjct: 481 I 481
>MPPB_BLAEM (Q00302) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (BeMPP1) Length = 465 Score = 47.0 bits (110), Expect = 6e-05 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%) Frame = -2 Query: 596 AKASAKSVILRNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKII- 420 AK K+ +L L+ E++GRQ LA+G R ++ + VDA+T+ DV VA + I Sbjct: 376 AKQQLKTSLLLALDGTTPVAEEIGRQMLAYGRRLSPFEIDRLVDAVTVEDVKRVANEFIY 435 Query: 419 SSPLTMASHGNVLSVPAYETVR 354 L + + G V +P Y +R Sbjct: 436 DRDLAIVAVGPVECLPDYNRIR 457
>MPPB_MOUSE (Q9CXT8) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (P-52) Length = 489 Score = 46.6 bits (109), Expect = 8e-05 Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 2/121 (1%) Frame = -2 Query: 713 FGIHASTDAAFVPKVIDLAARELTSLXTPGQVDQTQLDRAKASAKSVILRNLESKASTTE 534 +G++ + A V ++ + E L T V ++++ RAK K+ +L L+ E Sbjct: 363 WGLYMVCEQATVADMLHVVQNEWKRLCT--DVTESEVARAKNLLKTNMLLQLDGSTPICE 420 Query: 533 DMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKII--SSPLTMASHGNVLSVPAYET 360 D+GRQ L + R P+ +L +DA+ V V K I SP +A+ G + +P + Sbjct: 421 DIGRQMLCYNRRIPIPELEARIDAVDAETVRRVCTKYIHDKSP-AIAALGPIERLPDFNQ 479 Query: 359 V 357 + Sbjct: 480 I 480
>MPPA_SCHPO (O94745) Probable mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) Length = 494 Score = 46.6 bits (109), Expect = 8e-05 Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 11/104 (10%) Frame = -2 Query: 662 LAARELTSLXTPGQVDQTQLDRAKASAKSVILRNLESKASTTEDMGRQ-ALAFGERKPVE 486 L REL + T V + +RAK KS +L NLES+ + ED+GRQ G + Sbjct: 376 LIIRELCN--TVLSVTSEETERAKNQLKSSLLMNLESRMISLEDLGRQIQTQNGLYITPK 433 Query: 485 QLLKAVDAITLADVSTVAAKIISSPL----------TMASHGNV 384 ++++ +DA+T +D+S VA ++++ + T+ HGNV Sbjct: 434 EMIEKIDALTPSDLSRVARRVLTGNVSNPGNGTGKPTVLIHGNV 477
>MPPB_RAT (Q03346) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (P-52) Length = 489 Score = 45.8 bits (107), Expect = 1e-04 Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 2/121 (1%) Frame = -2 Query: 713 FGIHASTDAAFVPKVIDLAARELTSLXTPGQVDQTQLDRAKASAKSVILRNLESKASTTE 534 +G++ + A V ++ +E L T V ++++ RAK K+ +L L+ E Sbjct: 363 WGLYMVCEQATVADMLHAVQKEWMRLCTA--VSESEVARAKNLLKTNMLLQLDGSTPICE 420 Query: 533 DMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKII--SSPLTMASHGNVLSVPAYET 360 D+GRQ L + R P+ +L +DA+ V V K I SP +A+ G + +P + Sbjct: 421 DIGRQMLCYNRRIPIPELEARIDAVDAEMVREVCTKYIYGKSP-AIAALGPIERLPDFNQ 479 Query: 359 V 357 + Sbjct: 480 I 480
>UQCR1_EUGGR (P43264) Ubiquinol-cytochrome-c reductase complex core protein I,| mitochondrial precursor (EC 1.10.2.2) Length = 494 Score = 45.8 bits (107), Expect = 1e-04 Identities = 23/84 (27%), Positives = 44/84 (52%) Frame = -2 Query: 671 VIDLAARELTSLXTPGQVDQTQLDRAKASAKSVILRNLESKASTTEDMGRQALAFGERKP 492 ++ A REL + + + + +RAK K + L+ + +D+GRQ L+FG R P Sbjct: 364 ILHYAMRELIRVSR--NISEEEFERAKNQLKLQTMLQLDGTTNIADDIGRQVLSFGARVP 421 Query: 491 VEQLLKAVDAITLADVSTVAAKII 420 + + +DAI+ D+ V +++ Sbjct: 422 LASFFEQLDAISREDLIRVGPRVL 445
>MPPB_PONPY (Q5REK3) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) Length = 489 Score = 45.4 bits (106), Expect = 2e-04 Identities = 30/121 (24%), Positives = 61/121 (50%), Gaps = 2/121 (1%) Frame = -2 Query: 713 FGIHASTDAAFVPKVIDLAARELTSLXTPGQVDQTQLDRAKASAKSVILRNLESKASTTE 534 +G++ + + V ++ + +E L T V ++++ RA+ K+ +L L+ E Sbjct: 363 WGLYMVCEPSTVADMLHVVQKEWMRLCT--SVTESEVARARNLLKTNMLLQLDGSTPICE 420 Query: 533 DMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKII--SSPLTMASHGNVLSVPAYET 360 D+GRQ L + R P+ +L +DA+ + V K I SP +A+ G + +P ++ Sbjct: 421 DIGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSP-AIAAVGPIEQLPDFKQ 479 Query: 359 V 357 + Sbjct: 480 I 480
>Y293_RICCN (Q92IX7) Hypothetical zinc protease RC0293 (EC 3.4.99.-)| Length = 412 Score = 35.8 bits (81), Expect = 0.13 Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 2/110 (1%) Frame = -2 Query: 713 FGIHASTDAAFVPKVIDLAARELTS--LXTPGQVDQTQLDRAKASAKSVILRNLESKAST 540 F I+AST ++L +E+ + + QV ++ RAK +S + E Sbjct: 300 FTIYAST----AHDKLELLYKEIKNEIIKMTEQVSTEEILRAKTQLRSNLQMAQEKNTYK 355 Query: 539 TEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHG 390 +E++G+ FG+ E++++ + +I D+ A KI S T A G Sbjct: 356 SEEIGKNYSVFGQYISPEEIMEIIMSIKADDIINTANKIFSGTTTSAIIG 405
>Y219_RICPR (O05945) Hypothetical zinc protease RP219 (EC 3.4.99.-)| Length = 412 Score = 34.7 bits (78), Expect = 0.30 Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 2/110 (1%) Frame = -2 Query: 713 FGIHASTDAAFVPKVIDLAARELTS--LXTPGQVDQTQLDRAKASAKSVILRNLESKAST 540 F I+AST ++L RE+ + + V ++ RAK +S + E Sbjct: 300 FTIYAST----AHNKLELLYREIKNEIIKITETVSTEEIIRAKMQLRSNLQMAQEQNTYK 355 Query: 539 TEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHG 390 +E++G+ FG+ E++++ + I D+ A KI S T+A G Sbjct: 356 SEEIGKNYSVFGKYILPEEIIEIITNIRADDIINTANKIFSGTTTLAIIG 405
>PDR14_ARATH (Q7PC82) Probable pleiotropic drug resistance protein 14| Length = 1392 Score = 32.0 bits (71), Expect = 1.9 Identities = 16/46 (34%), Positives = 26/46 (56%) Frame = -2 Query: 533 DMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMAS 396 DM ++ LAFGE+K V L+ ++ VA +I+ P+ +AS Sbjct: 1333 DMEKEILAFGEKKKVSDFLEDYFGYRYDSLALVAVVLIAFPILLAS 1378
>PDR15_ARATH (Q7PC81) Putative pleiotropic drug resistance protein 15| Length = 1390 Score = 31.6 bits (70), Expect = 2.5 Identities = 16/46 (34%), Positives = 26/46 (56%) Frame = -2 Query: 533 DMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMAS 396 DM ++ LAFGE+K V L+ ++ VA +I+ P+ +AS Sbjct: 1331 DMEKEILAFGEKKKVSAFLEDYFGYRYDSLALVAVVLIAFPILLAS 1376
>SM3L2_ARATH (Q9FNI6) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 2 (EC 3.6.1.-) (SMARCA3-like protein 2) Length = 1029 Score = 31.6 bits (70), Expect = 2.5 Identities = 21/56 (37%), Positives = 31/56 (55%) Frame = +1 Query: 415 DEMIFAATVDTSARVIASTAFRSCSTGFLSPNANAWRPMSSVVDAFDSRFLKITDF 582 D M TV T + ++A + +++ STGFL PN + +SS VD S +K T F Sbjct: 419 DAMGLGKTVMTISLLLAHS-WKAASTGFLCPNYEGDKVISSSVDDLTSPPVKATKF 473
>LRC27_HUMAN (Q9C0I9) Leucine-rich repeat-containing protein 27| Length = 530 Score = 31.6 bits (70), Expect = 2.5 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 2/82 (2%) Frame = -2 Query: 689 AAFVPKVIDLAARELTSLXTPGQVDQTQLDRAKASAKSVIL--RNLESKASTTEDMGRQA 516 A+ +P DL L PG++ ++ +AS + L RNLE K R+ Sbjct: 392 ASKIPSATDLIDNRKVPLNPPGKMKPSKEKSPQASKEMSALQERNLEEKIKQHVLQMREQ 451 Query: 515 LAFGERKPVEQLLKAVDAITLA 450 F + P+E++ KA + + +A Sbjct: 452 RRFHGQAPLEEMRKAAEDLEIA 473
>RS6_XYLFT (P66605) 30S ribosomal protein S6| Length = 143 Score = 30.4 bits (67), Expect = 5.6 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%) Frame = -2 Query: 650 ELTSLXTPGQVDQTQ--LDRAKASAKSVILRNLESKASTTEDMGRQALAFGERKPVEQLL 477 E+ L P Q +Q Q L+R KA ++ N K ED GR+ LA+ P+++L+ Sbjct: 6 EIVLLVHPDQSEQVQAMLERYKA-----LIENGHGKIHRLEDWGRRQLAY----PIQKLV 56 Query: 476 KA 471 KA Sbjct: 57 KA 58
>RS6_XYLFA (P66604) 30S ribosomal protein S6| Length = 143 Score = 30.4 bits (67), Expect = 5.6 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%) Frame = -2 Query: 650 ELTSLXTPGQVDQTQ--LDRAKASAKSVILRNLESKASTTEDMGRQALAFGERKPVEQLL 477 E+ L P Q +Q Q L+R KA ++ N K ED GR+ LA+ P+++L+ Sbjct: 6 EIVLLVHPDQSEQVQAMLERYKA-----LIENGHGKIHRLEDWGRRQLAY----PIQKLV 56 Query: 476 KA 471 KA Sbjct: 57 KA 58
>ATPG_STRCO (Q9K4D4) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1| sector gamma subunit) Length = 305 Score = 29.6 bits (65), Expect = 9.6 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Frame = -2 Query: 557 ESKASTTEDMGRQALA---FGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGN 387 E + T +GR+ LA F ERK VE D T AD VAA +I + + G Sbjct: 110 EGRQVDTYIVGRRGLAHYNFRERKVVESFAGFTDEPTYADAKKVAAPLIEAIEKDTAEGG 169 Query: 386 V 384 V Sbjct: 170 V 170
>ATPG_STRLI (P50007) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1| sector gamma subunit) Length = 302 Score = 29.6 bits (65), Expect = 9.6 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Frame = -2 Query: 557 ESKASTTEDMGRQALA---FGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGN 387 E + T +GR+ LA F ERK VE D T AD VAA +I + + G Sbjct: 107 EGRQVDTYIVGRRGLAHYNFRERKVVESFAGFTDEPTYADAKKVAAPLIEAIEKDTAEGG 166 Query: 386 V 384 V Sbjct: 167 V 167 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 103,257,839 Number of Sequences: 219361 Number of extensions: 2112133 Number of successful extensions: 5938 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 5639 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5935 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7252940416 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
