ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags31c09 |
|---|---|
| Clone Library Name | barley_pub |
>NFYC2_ARATH (Q8LCG7) Nuclear transcription factor Y subunit C-2 (AtNF-YC-2)| (Transcriptional activator HAP5B) Length = 199 Score = 123 bits (308), Expect = 5e-28 Identities = 57/66 (86%), Positives = 66/66 (100%) Frame = -1 Query: 610 ISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIIPR 431 ISAEAPV+FAKACE+FILELTLR+W+HTEENKRRTLQKNDIAAAI+RTD++DFLVDIIPR Sbjct: 95 ISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPR 154 Query: 430 DDMKEE 413 D++KEE Sbjct: 155 DELKEE 160
>NFYC9_ARATH (Q8L4B2) Nuclear transcription factor Y subunit C-9 (AtNF-YC-9)| (Transcriptional activator HAP5C) Length = 231 Score = 121 bits (303), Expect = 2e-27 Identities = 56/66 (84%), Positives = 65/66 (98%) Frame = -1 Query: 610 ISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIIPR 431 ISAEAPVVFA+ACE+FILELTLRSW HTEENKRRTLQKNDIAAA+TRTDI+DFLVDI+PR Sbjct: 99 ISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPR 158 Query: 430 DDMKEE 413 +D+++E Sbjct: 159 EDLRDE 164
>NFYC3_ARATH (Q9ZVL3) Nuclear transcription factor Y subunit C-3 (AtNF-YC-3)| Length = 217 Score = 121 bits (303), Expect = 2e-27 Identities = 56/66 (84%), Positives = 65/66 (98%) Frame = -1 Query: 610 ISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIIPR 431 ISAEAPVVFA+ACE+FILELTLRSW HTEENKRRTLQKNDIAAA+TRTDI+DFLVDI+PR Sbjct: 89 ISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPR 148 Query: 430 DDMKEE 413 +D+++E Sbjct: 149 EDLRDE 154
>NFYC1_ARATH (Q9SMP0) Nuclear transcription factor Y subunit C-1 (AtNF-YC-1)| (Transcriptional activator HAP5A) Length = 234 Score = 120 bits (302), Expect = 2e-27 Identities = 55/66 (83%), Positives = 65/66 (98%) Frame = -1 Query: 610 ISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIIPR 431 ISAEAP++FAKACE+FILELT+RSW+H EENKRRTLQKNDIAAAITRTDI+DFLVDI+PR Sbjct: 84 ISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPR 143 Query: 430 DDMKEE 413 D++K+E Sbjct: 144 DEIKDE 149
>NFYC4_ARATH (Q9FMV5) Nuclear transcription factor Y subunit C-4 (AtNF-YC-4)| Length = 250 Score = 120 bits (301), Expect = 3e-27 Identities = 55/66 (83%), Positives = 65/66 (98%) Frame = -1 Query: 610 ISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIIPR 431 ISAEAP++FAKACE+FILELT+RSW+H EENKRRTLQKNDIAAAITRTDI+DFLVDI+PR Sbjct: 97 ISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPR 156 Query: 430 DDMKEE 413 +++KEE Sbjct: 157 EEIKEE 162
>NFYC_HUMAN (Q13952) Nuclear transcription factor Y subunit gamma (Nuclear| transcription factor Y subunit C) (NF-YC) (CAAT-box DNA-binding protein subunit C) (Transactivator HSM-1/2) Length = 458 Score = 103 bits (256), Expect = 5e-22 Identities = 46/64 (71%), Positives = 59/64 (92%) Frame = -1 Query: 610 ISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIIPR 431 ISAEAPV+FAKA ++FI ELTLR+W+HTE+NKRRTLQ+NDIA AIT+ D +DFL+DI+PR Sbjct: 61 ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120 Query: 430 DDMK 419 D++K Sbjct: 121 DELK 124
>NFYC_RAT (Q62725) Nuclear transcription factor Y subunit gamma (Nuclear| transcription factor Y subunit C) (NF-YC) (CAAT-box DNA-binding protein subunit C) (CCAAT-binding transcription factor subunit C) (CBF-C) Length = 335 Score = 103 bits (256), Expect = 5e-22 Identities = 46/64 (71%), Positives = 59/64 (92%) Frame = -1 Query: 610 ISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIIPR 431 ISAEAPV+FAKA ++FI ELTLR+W+HTE+NKRRTLQ+NDIA AIT+ D +DFL+DI+PR Sbjct: 61 ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120 Query: 430 DDMK 419 D++K Sbjct: 121 DELK 124
>NFYC_PONPY (Q5RA23) Nuclear transcription factor Y subunit gamma (Nuclear| transcription factor Y subunit C) (NF-YC) (CAAT-box DNA-binding protein subunit C) Length = 335 Score = 103 bits (256), Expect = 5e-22 Identities = 46/64 (71%), Positives = 59/64 (92%) Frame = -1 Query: 610 ISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIIPR 431 ISAEAPV+FAKA ++FI ELTLR+W+HTE+NKRRTLQ+NDIA AIT+ D +DFL+DI+PR Sbjct: 61 ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120 Query: 430 DDMK 419 D++K Sbjct: 121 DELK 124
>NFYC_MOUSE (P70353) Nuclear transcription factor Y subunit gamma (Nuclear| transcription factor Y subunit C) (NF-YC) (CAAT-box DNA-binding protein subunit C) Length = 335 Score = 103 bits (256), Expect = 5e-22 Identities = 46/64 (71%), Positives = 59/64 (92%) Frame = -1 Query: 610 ISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIIPR 431 ISAEAPV+FAKA ++FI ELTLR+W+HTE+NKRRTLQ+NDIA AIT+ D +DFL+DI+PR Sbjct: 61 ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120 Query: 430 DDMK 419 D++K Sbjct: 121 DELK 124
>NFYC_BOVIN (Q5E9X1) Nuclear transcription factor Y subunit gamma (Nuclear| transcription factor Y subunit C) (NF-YC) (CAAT-box DNA-binding protein subunit C) Length = 335 Score = 103 bits (256), Expect = 5e-22 Identities = 46/64 (71%), Positives = 59/64 (92%) Frame = -1 Query: 610 ISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIIPR 431 ISAEAPV+FAKA ++FI ELTLR+W+HTE+NKRRTLQ+NDIA AIT+ D +DFL+DI+PR Sbjct: 61 ISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPR 120 Query: 430 DDMK 419 D++K Sbjct: 121 DELK 124
>HAP5_YEAST (Q02516) Transcriptional activator HAP5| Length = 242 Score = 91.3 bits (225), Expect = 2e-18 Identities = 39/60 (65%), Positives = 52/60 (86%) Frame = -1 Query: 610 ISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIIPR 431 ISAEAP++FAKACE+FI ELT+R+W E NKRRTLQK DIA A+ ++D++DFL+D++PR Sbjct: 178 ISAEAPIIFAKACEIFITELTMRAWCVAERNKRRTLQKADIAEALQKSDMFDFLIDVVPR 237
>NFYC6_ARATH (Q9FGP7) Nuclear transcription factor Y subunit C-6 (AtNF-YC-6)| Length = 202 Score = 90.5 bits (223), Expect = 3e-18 Identities = 37/62 (59%), Positives = 54/62 (87%) Frame = -1 Query: 610 ISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIIPR 431 +SAEAP++FAKACE+FI++LT+RSW+ EENKR TLQK+DI+ A+ + YDFL+D++P+ Sbjct: 73 VSAEAPIIFAKACEMFIVDLTMRSWLKAEENKRHTLQKSDISNAVASSFTYDFLLDVVPK 132 Query: 430 DD 425 D+ Sbjct: 133 DE 134
>HAP5_SCHPO (P79007) Transcriptional activator hap5| Length = 415 Score = 86.3 bits (212), Expect = 6e-17 Identities = 36/62 (58%), Positives = 55/62 (88%) Frame = -1 Query: 610 ISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIIPR 431 ISAEAP +FAK E+FI ELT+R+W+H ++N+RRTLQ++DIA A++++++YDFL+DII + Sbjct: 129 ISAEAPFLFAKGSEIFIAELTMRAWLHAKKNQRRTLQRSDIANAVSKSEMYDFLIDIISK 188 Query: 430 DD 425 D+ Sbjct: 189 DN 190
>NFYC5_ARATH (Q9FGP6) Nuclear transcription factor Y subunit C-5 (AtNF-YC-5)| Length = 186 Score = 77.0 bits (188), Expect = 4e-14 Identities = 30/62 (48%), Positives = 52/62 (83%) Frame = -1 Query: 610 ISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIIPR 431 I+AEAP + +KACE+F+++LT+RSW+H +E+ R T++K+D+ A +++T I+DFL D +P+ Sbjct: 55 IAAEAPNLLSKACEMFVMDLTMRSWLHAQESNRLTIRKSDVDAVVSQTVIFDFLRDDVPK 114 Query: 430 DD 425 D+ Sbjct: 115 DE 116
>NFYC8_ARATH (Q4PSE2) Nuclear transcription factor Y subunit C-8 (AtNF-YC-8)| Length = 187 Score = 76.6 bits (187), Expect = 5e-14 Identities = 31/56 (55%), Positives = 50/56 (89%) Frame = -1 Query: 610 ISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVD 443 I++EAP++ +KACE+FI++LT+RSW+H +E+KR TLQK+++ AA+ +T I+DFL+D Sbjct: 55 IASEAPILLSKACEMFIMDLTMRSWLHAQESKRVTLQKSNVDAAVAQTVIFDFLLD 110
>NFYC7_ARATH (Q9FGP8) Nuclear transcription factor Y subunit C-7 (AtNF-YC-7)| Length = 212 Score = 72.0 bits (175), Expect = 1e-12 Identities = 34/67 (50%), Positives = 51/67 (76%), Gaps = 6/67 (8%) Frame = -1 Query: 610 ISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQ------KNDIAAAITRTDIYDFL 449 ++AEAPV+ +KACE+ IL+LT+RSW+HT E R+TL+ ++DI+AA TR+ + FL Sbjct: 82 VTAEAPVLISKACEMLILDLTMRSWLHTVEGGRQTLKRSDTLTRSDISAATTRSFKFTFL 141 Query: 448 VDIIPRD 428 D++PRD Sbjct: 142 GDVVPRD 148
>NFYCA_ARATH (Q58CM8) Nuclear transcription factor Y subunit C-10 (AtNF-YC-10)| Length = 195 Score = 70.9 bits (172), Expect = 3e-12 Identities = 30/59 (50%), Positives = 43/59 (72%) Frame = -1 Query: 610 ISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIIP 434 IS + P +F+KACE FILE+TLR+WMHT+ R T+++ DI A+ + YDFL+D +P Sbjct: 86 ISCDVPALFSKACEYFILEVTLRAWMHTQSCTRETIRRCDIFQAVKNSGTYDFLIDRVP 144
>CHRC1_HUMAN (Q9NRG0) Chromatin accessibility complex protein 1 (CHRAC-1)| (CHRAC-15) (HuCHRAC15) (DNA polymerase epsilon subunit p15) Length = 131 Score = 41.6 bits (96), Expect = 0.002 Identities = 20/60 (33%), Positives = 36/60 (60%) Frame = -1 Query: 610 ISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIIPR 431 I+ EA V+ AKA E+F+ L S+ H +++ L +D+A +++ + FL DI+P+ Sbjct: 37 INQEALVLTAKATELFVQCLATYSYRHGSGKEKKVLTYSDLANTAQQSETFQFLADILPK 96
>CHRC1_MOUSE (Q9JKP8) Chromatin accessibility complex protein 1 (CHRAC-1) (DNA| polymerase epsilon subunit p15) (YC-like protein 1) (YCL1) (NF-YC-like protein) Length = 129 Score = 39.7 bits (91), Expect = 0.007 Identities = 20/60 (33%), Positives = 34/60 (56%) Frame = -1 Query: 610 ISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIIPR 431 I+ EA V+ AKA E+F+ L S+ H ++ L +D+A+ ++ FL DI+P+ Sbjct: 37 INQEALVLTAKATELFVQYLATCSYRHGSGKAKKALTYSDLASTAEDSETLQFLADILPK 96
>DPOE4_MOUSE (Q9CQ36) DNA polymerase epsilon subunit 4 (EC 2.7.7.7) (DNA| polymerase II subunit 4) (DNA polymerase epsilon subunit p12) Length = 118 Score = 36.2 bits (82), Expect = 0.077 Identities = 17/51 (33%), Positives = 30/51 (58%) Frame = -1 Query: 601 EAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFL 449 EA + A+A E+F+ + ++ ++ KR+TLQ+ D+ AI D + FL Sbjct: 63 EAIFILARAAELFVETIAKDAYCCAQQGKRKTLQRRDLDNAIEAVDEFAFL 113
>DPOE4_HUMAN (Q9NR33) DNA polymerase epsilon subunit 4 (EC 2.7.7.7) (DNA| polymerase II subunit 4) (DNA polymerase epsilon subunit p12) Length = 117 Score = 36.2 bits (82), Expect = 0.077 Identities = 17/51 (33%), Positives = 30/51 (58%) Frame = -1 Query: 601 EAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFL 449 EA + A+A E+F+ + ++ ++ KR+TLQ+ D+ AI D + FL Sbjct: 62 EAIFILARAAELFVETIAKDAYCCAQQGKRKTLQRRDLDNAIEAVDEFAFL 112
>DPB3_DEBHA (Q6BX14) DNA polymerase epsilon subunit C (EC 2.7.7.7) (DNA| polymerase II subunit C) Length = 277 Score = 34.3 bits (77), Expect = 0.29 Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%) Frame = -1 Query: 610 ISAEAPVVFAK--ACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDII 437 ++A V+A A E+FI T +S + + +KR+ LQ D + A+ D +FL D + Sbjct: 108 LAASQSAVYATGLATELFIQYFTEQSLVLAKMDKRKKLQYKDFSNAVASQDSLNFLSDTV 167 Query: 436 PR 431 P+ Sbjct: 168 PK 169
>DRAP1_MOUSE (Q9D6N5) Dr1-associated corepressor (Dr1-associated protein 1)| (Negative co-factor 2 alpha) (NC2 alpha) Length = 204 Score = 33.5 bits (75), Expect = 0.50 Identities = 14/58 (24%), Positives = 31/58 (53%) Frame = -1 Query: 610 ISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDII 437 ++A PV+ ++A E+F+ L ++ T+ +T+ + + I +DFL D++ Sbjct: 29 VAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLKQCIELEQQFDFLKDLV 86
>DRAP1_HUMAN (Q14919) Dr1-associated corepressor (Dr1-associated protein 1)| (Negative co-factor 2 alpha) (NC2 alpha) Length = 204 Score = 33.5 bits (75), Expect = 0.50 Identities = 14/58 (24%), Positives = 31/58 (53%) Frame = -1 Query: 610 ISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDII 437 ++A PV+ ++A E+F+ L ++ T+ +T+ + + I +DFL D++ Sbjct: 29 VAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLKQCIELEQQFDFLKDLV 86
>M3KL4_HUMAN (Q5TCX8) Mitogen-activated protein kinase kinase kinase (EC| 2.7.11.25) (Mixed lineage kinase 4) Length = 1036 Score = 32.3 bits (72), Expect = 1.1 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 8/68 (11%) Frame = +1 Query: 193 ASLRETAAALQGPPQSVALEVAATHMPLGDPADHHTPFL-------PRVPAVL-ADSNKE 348 ASLR + Q PQ+ ++A T +G P H T FL VP++L AD + Sbjct: 948 ASLRSRSDLPQAYPQTAVSQLAQTACVVGRPGPHPTQFLAAKERTKSHVPSLLDADVEGQ 1007 Query: 349 DRHQLVPL 372 R VPL Sbjct: 1008 SRDYTVPL 1015
>DPB3_YARLI (Q6C6M5) DNA polymerase epsilon subunit C (EC 2.7.7.7) (DNA| polymerase II subunit C) Length = 114 Score = 32.0 bits (71), Expect = 1.4 Identities = 14/60 (23%), Positives = 29/60 (48%) Frame = -1 Query: 610 ISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIIPR 431 ++ P AKA E+F++ L + + + + + A+ T+ +DFL DI+ + Sbjct: 30 VAQATPTAVAKALELFMISLIEETCNQARMRNSKRVSPSHLKQAVLETEQFDFLQDIVSK 89
>DPB3_SCHPO (Q10315) DNA polymerase epsilon subunit C (EC 2.7.7.7) (DNA| polymerase II subunit C) Length = 199 Score = 32.0 bits (71), Expect = 1.4 Identities = 14/60 (23%), Positives = 32/60 (53%) Frame = -1 Query: 610 ISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIIPR 431 ++ PV+ +KA E+F+ + S T ++ + + + + A+ + +DFL DI+ + Sbjct: 42 VAQVTPVIMSKALELFMQSIIQESCKQTRLHQAKRVTVSHLKHAVQSVEQFDFLQDIVEK 101
>DPOE3_MOUSE (Q9JKP7) DNA polymerase epsilon subunit 3 (EC 2.7.7.7) (DNA| polymerase II subunit 3) (DNA polymerase epsilon subunit p17) (YB-like protein 1) (YBL1) (NF-YB-like protein) Length = 145 Score = 30.4 bits (67), Expect = 4.2 Identities = 16/57 (28%), Positives = 29/57 (50%) Frame = -1 Query: 610 ISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDI 440 IS EA ++A VF+L T + + KR+TL +D+ +A+ + F+ + Sbjct: 29 ISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDVLSAMEEMEFQRFITPL 85
>DPOE3_PONPY (Q5R4W3) DNA polymerase epsilon subunit 3 (EC 2.7.7.7) (DNA| polymerase II subunit 3) (DNA polymerase epsilon subunit p17) Length = 147 Score = 30.0 bits (66), Expect = 5.5 Identities = 16/57 (28%), Positives = 29/57 (50%) Frame = -1 Query: 610 ISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDI 440 IS EA ++A VF+L T + + KR+TL +D+ +A+ + F+ + Sbjct: 29 ISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDVLSAMEEMEFQRFVTPL 85
>DPOE3_HUMAN (Q9NRF9) DNA polymerase epsilon subunit 3 (EC 2.7.7.7) (DNA| polymerase II subunit 3) (DNA polymerase epsilon subunit p17) (Chromatin accessibility complex 17) (HuCHRAC17) (CHRAC-17) (Arsenic-transactivated protein) (AsTP) Length = 147 Score = 30.0 bits (66), Expect = 5.5 Identities = 16/57 (28%), Positives = 29/57 (50%) Frame = -1 Query: 610 ISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDI 440 IS EA ++A VF+L T + + KR+TL +D+ +A+ + F+ + Sbjct: 29 ISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDVLSAMEEMEFQRFVTPL 85
>DPOE3_RAT (Q642A5) DNA polymerase epsilon subunit 3 (EC 2.7.7.7) (DNA| polymerase II subunit 3) (DNA polymerase epsilon subunit p17) Length = 145 Score = 30.0 bits (66), Expect = 5.5 Identities = 16/57 (28%), Positives = 29/57 (50%) Frame = -1 Query: 610 ISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDI 440 IS EA ++A VF+L T + + KR+TL +D+ +A+ + F+ + Sbjct: 29 ISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDVLSAMEEMEFQRFVTPL 85
>ATG13_ASPFU (Q4WHN5) Autophagy-related protein 13| Length = 958 Score = 29.3 bits (64), Expect = 9.4 Identities = 17/55 (30%), Positives = 25/55 (45%) Frame = +1 Query: 187 LLASLRETAAALQGPPQSVALEVAATHMPLGDPADHHTPFLPRVPAVLADSNKED 351 L S ++ L G P VA +T G P HTP P +P+ L+ ++ D Sbjct: 610 LQRSSNASSKQLSGVPPMVAGASVSTASSPGKPISPHTPHTPAIPSRLSSNSIVD 664
>LACF_AGRRD (P29823) Lactose transport system permease protein lacF| Length = 298 Score = 29.3 bits (64), Expect = 9.4 Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 3/73 (4%) Frame = +1 Query: 124 NTSLSFIGIKFRIMLWLPCINLLAS---LRETAAALQGPPQSVALEVAATHMPLGDPADH 294 N L + G+ FR M++LPC++ L + L ++ +L G + L + P+G D Sbjct: 100 NPKLRYSGL-FRTMIFLPCVSSLVAYSILFKSMFSLDGVVNNTLLAIGIIGEPIGWLTD- 157 Query: 295 HTPFLPRVPAVLA 333 PF +V ++A Sbjct: 158 --PFWAKVLIIIA 168 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,131,398 Number of Sequences: 219361 Number of extensions: 1357739 Number of successful extensions: 4453 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 4343 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4452 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5424720305 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
