>TAF1_HUMAN (P21675) Transcription initiation factor TFIID subunit 1 (EC|
            2.7.11.1) (Transcription initiation factor TFIID 250 kDa
            subunit) (TAF(II)250) (TAFII-250) (TAFII250)
            (TBP-associated factor 250 kDa) (p250) (Cell cycle gene 1
            protein)
          Length = 1872

 Score = 33.5 bits (75), Expect = 0.47
 Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 12/127 (9%)
 Frame = +3

Query: 186  QLESVLLPLIDASDQLVF-------VSKGKQTAPPRWPFSGSWNGERTHHMILTKKPEIA 344
            +LE  + PL+D  DQ+ F       V++     P  WPF         HH +  K     
Sbjct: 1490 RLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSWPF---------HHPVNKKFVPDY 1540

Query: 345  NKVTYYGLPLEEIRNHSS-----SQEASLKDIQVRTL*MPHAASFLYTEVISNFQKRNPP 509
             KV    + LE IR + S     S+E+ L D+ +               +++N  K N P
Sbjct: 1541 YKVIVNPMDLETIRKNISKHKYQSRESFLDDVNL---------------ILANSVKYNGP 1585

Query: 510  STCFSPT 530
             + ++ T
Sbjct: 1586 ESQYTKT 1592

>TAF1L_HUMAN (Q8IZX4) Transcription initiation factor TFIID 210 kDa subunit|
            (TBP-associated factor 210 kDa) (TAF(II)210)
            (TBP-associated factor 1-like)
          Length = 1826

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 12/127 (9%)
 Frame = +3

Query: 186  QLESVLLPLIDASDQLVF-------VSKGKQTAPPRWPFSGSWNGERTHHMILTKKPEIA 344
            +LE  + PL+D  DQ+ F       V++     P  WPF         HH +  K     
Sbjct: 1509 RLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSWPF---------HHPVNKKFVPDY 1559

Query: 345  NKVTYYGLPLEEIRNHSS-----SQEASLKDIQVRTL*MPHAASFLYTEVISNFQKRNPP 509
             K+    + LE IR + S     S+E+ L D+ +               +++N  K N P
Sbjct: 1560 YKMIVNPVDLETIRKNISKHKYQSRESFLDDVNL---------------ILANSVKYNGP 1604

Query: 510  STCFSPT 530
             + ++ T
Sbjct: 1605 ESQYTKT 1611

>CR4BA_BACTI (P05519) Pesticidal crystal protein cry4Ba (Insecticidal|
           delta-endotoxin CryIVB(a)) (Crystaline entomocidal
           protoxin) (128 kDa crystal protein)
          Length = 1136

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 3/116 (2%)
 Frame = +3

Query: 84  ERDAKEGSGKSTAVTEVTLV*QGWLHQA-YTKLNIQLESVLLPLID--ASDQLVFVSKGK 254
           +R+    S ++  +T+  L        A Y    +  E +LLP+    A+  L+ +  G 
Sbjct: 134 KREPNNQSYRTAVITQFNLTSAKLRETAVYFSNLVGYELLLLPIYAQVANFNLLLIRDGL 193

Query: 255 QTAPPRWPFSGSWNGERTHHMILTKKPEIANKVTYYGLPLEEIRNHSSSQEASLKD 422
             A   W  + S   +  + M+   K  IA+ +T+Y   L+ +RN S+ Q  +  D
Sbjct: 194 INAQ-EWSLARSAGDQLYNTMVQYTKEYIAHSITWYNKGLDVLRNKSNGQWITFND 248

>JHD2C_MOUSE (Q69ZK6) Probable JmjC domain-containing histone demethylation|
            protein 2C (EC 1.14.11.-) (Jumonji domain-containing
            protein 1C)
          Length = 2350

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +3

Query: 9    DYKETSKASVNEQ*YYNNNLHLRKNERDAKEGSGKSTAVTEVTLV 143
            ++K +S  S+ E    NNNL+  K E   ++ SGKS A     +V
Sbjct: 1074 NFKNSSDQSLTEMWRSNNNLNREKAEWPVEKSSGKSQAAVASVIV 1118

>NADM_METMP (Q6LWX6) Nicotinamide-nucleotide adenylyltransferase (EC 2.7.7.1)|
           (NAD(+) pyrophosphorylase) (NAD(+) diphosphorylase) (NMN
           adenylyltransferase)
          Length = 171

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 6/93 (6%)
 Frame = +3

Query: 180 NIQLESVLLPLIDASDQLVFVSKGKQTAPPRWPFSGSWNGER------THHMILTKKPEI 341
           N  +    +P+ID     V+VS  +   P   PF+  + G        +    + KKPE+
Sbjct: 62  NYDINYYAIPIIDIDYNAVWVSSVESLTP---PFTTIYTGNSLVRELFSERNYVVKKPEL 118

Query: 342 ANKVTYYGLPLEEIRNHSSSQEASLKDIQVRTL 440
            N+  Y G  + +     S+ E  + +  V+ +
Sbjct: 119 YNRTDYSGTKIRKKMLEGSAWEHLVPEEVVKVI 151

>G3P_HAEIN (P44304) Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)|
           (GAPDH)
          Length = 339

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
 Frame = +2

Query: 377 RD*KPFFITGGLPQGYSGQDLV-NASC---CFLPVHRGHFEFPKAKSSLDLFLSYTTHHQ 544
           +D  P F+ G     Y+GQD+V NASC   C  P+ R   E    K  L      TT H 
Sbjct: 124 KDATPMFVRGVNFNAYAGQDIVSNASCTTNCLAPLARVVHETFGIKDGL-----MTTVHA 178

Query: 545 SVAMKRS 565
           + A +++
Sbjct: 179 TTATQKT 185


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,218,479
Number of Sequences: 219361
Number of extensions: 1748011
Number of successful extensions: 4324
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4324
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5158951200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)