| Clone Name | rbags30n01 |
|---|---|
| Clone Library Name | barley_pub |
>NCPR_ASPNG (Q00141) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR)| (P450R) Length = 693 Score = 31.6 bits (70), Expect = 1.0 Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 8/89 (8%) Frame = +3 Query: 162 MLQQAKLLSKISVLTSSTETCSILI-----YRSLAYKLFTS*VVA---IKTDMRLEDVKL 317 MLQ A+ L I+ S S+LI + Y + +S +V I +E V+L Sbjct: 416 MLQHAQALQSITSKPFSAVPFSLLIEGITKLQPRYYSISSSSLVQKDKISITAVVESVRL 475 Query: 318 PSVHHVQKNADTEYTPVRKIFATGRSLTR 404 P H+ K T Y K GRSL+R Sbjct: 476 PGASHMVKGVTTNYLLALKQKQNGRSLSR 504
>OR5L1_HUMAN (Q8NGL2) Olfactory receptor 5L1 (OST262)| Length = 311 Score = 30.8 bits (68), Expect = 1.7 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = -1 Query: 201 VQISWKVALLVAACHFSLATCCNLRVICLCL 109 V +SWKV + +A+C + T C+L +CL L Sbjct: 134 VTMSWKVRVELASCCYFCGTVCSLIHLCLAL 164
>XYLH_SHIFL (P0AGI7) Xylose transport system permease protein xylH (EC| 3.6.3.17) Length = 393 Score = 29.3 bits (64), Expect = 5.0 Identities = 14/56 (25%), Positives = 30/56 (53%) Frame = -3 Query: 376 IFLTGVYSVSAFFCTWCTEGSFTSSRRISVLIATT*EVKSLYARDL*ISILQVSVD 209 + + + ++ FF TW T+G++ S+R +S L+ T + + A + I+ +D Sbjct: 31 VMIAAIIAIMLFF-TWTTDGAYLSARNVSNLLRQT-AITGILAVGMVFVIISAEID 84
>XYLH_ECOLI (P0AGI4) Xylose transport system permease protein xylH (EC| 3.6.3.17) Length = 393 Score = 29.3 bits (64), Expect = 5.0 Identities = 14/56 (25%), Positives = 30/56 (53%) Frame = -3 Query: 376 IFLTGVYSVSAFFCTWCTEGSFTSSRRISVLIATT*EVKSLYARDL*ISILQVSVD 209 + + + ++ FF TW T+G++ S+R +S L+ T + + A + I+ +D Sbjct: 31 VMIAAIIAIMLFF-TWTTDGAYLSARNVSNLLRQT-AITGILAVGMVFVIISAEID 84
>XYLH_ECOL6 (P0AGI5) Xylose transport system permease protein xylH (EC| 3.6.3.17) Length = 393 Score = 29.3 bits (64), Expect = 5.0 Identities = 14/56 (25%), Positives = 30/56 (53%) Frame = -3 Query: 376 IFLTGVYSVSAFFCTWCTEGSFTSSRRISVLIATT*EVKSLYARDL*ISILQVSVD 209 + + + ++ FF TW T+G++ S+R +S L+ T + + A + I+ +D Sbjct: 31 VMIAAIIAIMLFF-TWTTDGAYLSARNVSNLLRQT-AITGILAVGMVFVIISAEID 84
>XYLH_ECO57 (P0AGI6) Xylose transport system permease protein xylH (EC| 3.6.3.17) Length = 393 Score = 29.3 bits (64), Expect = 5.0 Identities = 14/56 (25%), Positives = 30/56 (53%) Frame = -3 Query: 376 IFLTGVYSVSAFFCTWCTEGSFTSSRRISVLIATT*EVKSLYARDL*ISILQVSVD 209 + + + ++ FF TW T+G++ S+R +S L+ T + + A + I+ +D Sbjct: 31 VMIAAIIAIMLFF-TWTTDGAYLSARNVSNLLRQT-AITGILAVGMVFVIISAEID 84
>NU1M_DROGU (P51931) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH| dehydrogenase subunit 1) (Fragments) Length = 163 Score = 28.5 bits (62), Expect = 8.6 Identities = 18/51 (35%), Positives = 26/51 (50%) Frame = -2 Query: 377 YLSYWSIFCISIFLHMVHRRKLHVLEAHICFNSYNLGGEEFVCQRSVN*YT 225 YLSY+ S+FL + + + NS+NLGG F+C S+ YT Sbjct: 72 YLSYYISPIFSLFLSLF---VWMCMPFFVKLNSFNLGGLFFLCCTSLGVYT 119
>YFE2_YEAST (P43560) Hypothetical 76.3 kDa protein in SEC53-FET5 intergenic| region Length = 674 Score = 28.5 bits (62), Expect = 8.6 Identities = 10/22 (45%), Positives = 17/22 (77%) Frame = -2 Query: 332 MVHRRKLHVLEAHICFNSYNLG 267 ++++ KL++ E H+CFNS LG Sbjct: 225 LLYQGKLYITETHLCFNSNVLG 246 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,455,193 Number of Sequences: 219361 Number of extensions: 1403042 Number of successful extensions: 3449 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 3346 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3449 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)