ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags31b21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB011443.1| Triticum aestivum WESR2 mRNA, partial sequence 870 0.0
2gb|AY224462.1| Oryza sativa (japonica cultivar-group) isolate 23... 299 6e-78
3ref|XM_483357.1| Oryza sativa (japonica cultivar-group), mRNA 297 2e-77
4dbj|AK070323.1| Oryza sativa (japonica cultivar-group) cDNA clon... 297 2e-77
5gb|AY596608.1| Saccharum officinarum clone SCCCRZ1001G11, comple... 270 6e-69
6gb|AY107973.1| Zea mays PCO099381 mRNA sequence 234 3e-58
7dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 172 1e-39
8dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic D... 172 1e-39
9dbj|AB118016.1| Oryza sativa (japonica cultivar-group) bip129 mR... 141 3e-30
10dbj|AK101485.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 3e-24
11gb|BT017482.1| Zea mays clone EL01N0412B11.c mRNA sequence 107 5e-20
12gb|AC099404.2| Oryza sativa (japonica cultivar-group) chromosome... 74 7e-10
13dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 74 7e-10
14emb|X95271.1|OSMAR O.sativa matrix association region 72 3e-09
15ref|XM_875782.1| PREDICTED: Bos taurus similar to selenoprotein ... 50 0.010
16ref|XM_589759.2| PREDICTED: Bos taurus similar to selenoprotein ... 50 0.010
17gb|BC112740.1| Bos taurus similar to selenoprotein S, transcript... 50 0.010
18gb|AY109930.1| Zea mays CL12284_1 mRNA sequence 46 0.15
19gb|AC134397.6| Mus musculus chromosome 13, clone RP23-265J12, co... 44 0.59
20gb|AC154460.2| Mus musculus BAC clone RP24-163G22 from chromosom... 44 0.59
21emb|BX088720.8| Zebrafish DNA sequence from clone CH211-195M2 in... 44 0.59
22emb|CR854834.11| Zebrafish DNA sequence from clone DKEYP-92B10 i... 42 2.3
23gb|AC098587.5| Homo sapiens BAC clone RP11-231C18 from 4, comple... 42 2.3
24emb|AL359836.16| Human DNA sequence from clone RP11-389E6 on chr... 42 2.3
25emb|AL023806.1|HS466P17 Human DNA sequence from clone RP3-466P17... 42 2.3
26emb|BX248505.8| Zebrafish DNA sequence from clone CH211-87L2 in ... 42 2.3
27emb|BX255919.15| Zebrafish DNA sequence from clone DKEY-259P11 i... 42 2.3
28gb|AF214462.1| Hericium coralloides small subunit ribosomal RNA ... 42 2.3
29emb|BX004833.16| Zebrafish DNA sequence from clone DKEY-153J5 in... 42 2.3
30gb|AC005887.3|AC005887 citb_173_i_12, complete sequence 42 2.3
31emb|BX927240.11| Zebrafish DNA sequence from clone DKEY-16N13 in... 42 2.3
32emb|CR855277.16| Zebrafish DNA sequence from clone DKEY-71B5 in ... 42 2.3
33emb|AL772219.7| Zebrafish DNA sequence from clone DKEY-51K10 in ... 42 2.3
34gb|AC164981.2| Mus musculus BAC clone RP23-121F5 from chromosome... 40 9.2
35gb|AC162614.2| Mus musculus chromosome 7, clone RP23-421O10, com... 40 9.2
36gb|AC119211.8| Mus musculus chromosome 7, clone RP24-191C15, com... 40 9.2
37gb|AC117082.2| Dictyostelium discoideum chromosome 2 map complem... 40 9.2
38gb|AC174830.3| Myotis lucifugus clone CH235-234J19, complete seq... 40 9.2
39emb|AL355347.16| Human DNA sequence from clone RP11-506N21 on ch... 40 9.2
40gb|AC148205.3| Callicebus moloch clone LB5-314H24, complete sequ... 40 9.2
41emb|CR548612.1| Paramecium tetraurelia macronuclear largest chro... 40 9.2
42emb|AL844905.5| Mouse DNA sequence from clone RP23-384C15 on chr... 40 9.2
43emb|BX511263.7| Zebrafish DNA sequence from clone DKEY-204K5 in ... 40 9.2
44gb|AC113168.2| Homo sapiens chromosome 3 clone RP11-268B23, comp... 40 9.2
45gb|AC112220.2| Homo sapiens chromosome 3 clone RP11-10C24, compl... 40 9.2
46gb|AC099773.6| Mus Musculus Strain C57BL6/J Chromosome 5 RP23-33... 40 9.2
47gb|AC016868.8| Homo sapiens chromosome 8, clone RP11-15G16, comp... 40 9.2
48gb|AC016602.7| Homo sapiens chromosome 5 clone CTD-2061O12, comp... 40 9.2
49gb|AC102528.20| Mus musculus chromosome 5, clone RP23-30D20, com... 40 9.2
50dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
51gb|AC025754.4|AC025754 Homo sapiens chromosome 5 clone CTD-2024P... 40 9.2
52gb|AF204951.2|AF204951 Ectocarpus siliculosus virus, complete ge... 40 9.2
53dbj|AP003723.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
54dbj|AP005580.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
55dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
56dbj|AP001525.6| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 9.2
57gb|AY609646.1| Sus scrofa clone Clu_23229.scr.msk.p1.Contig1, mR... 40 9.2
58gb|AE015925.1| Chlamydophila caviae GPIC, complete genome 40 9.2
59gb|AC134435.3| Mus musculus BAC clone RP24-423J19 from 1, comple... 40 9.2
60gb|DP000019.1| Callicebus moloch target 1 genomic scaffold 40 9.2 
>dbj|AB011443.1| Triticum aestivum WESR2 mRNA, partial sequence
          Length = 760

 Score =  870 bits (439), Expect = 0.0
 Identities = 530/559 (94%), Gaps = 1/559 (0%)
 Strand = Plus / Minus

                                                                       
Query: 113 gtacagcgttccatccttctaccataaacaggagcacagcctcatcagggaagaacatgc 172
           ||||||||||||||||||||||||| ||||||||| |||| |||||||||||| ||||||
Sbjct: 760 gtacagcgttccatccttctaccatgaacaggagcgcagc-tcatcagggaaggacatgc 702

                                                                       
Query: 173 tctgatttctgcaaccctagatggcactcaacggttgtttacttctcagcatgtcggcgc 232
           ||||||||||||||||||| ||||||  | ||| | ||||||||||||||||||||||||
Sbjct: 701 tctgatttctgcaaccctacatggcagccgacgatagtttacttctcagcatgtcggcgc 642

                                                                       
Query: 233 ttgtgtctcctattgccatggtttgtgttactatcacgagacgatctcttctgcttcttt 292
           ||||||||||||||||||||||||  ||||| || | ||| |||||||||||||||||| 
Sbjct: 641 ttgtgtctcctattgccatggtttccgttaccattaagaggcgatctcttctgcttcttc 582

                                                                       
Query: 293 gtgcagaaggtttctactagaagcctgtacataataaacacaggtagcgccagcaaagca 352
           ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 581 gtgcagaaggtatctactagaagcctgtacataataaacacaggtagagccagcaaagca 522

                                                                       
Query: 353 gaggccaggaaccaaaccaactccttagtcacaactgcttttgttatttcatgttggtgc 412
           || ||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||
Sbjct: 521 gaagccaggaaccaaaccaactccttagtcgcaagtgattttgttatttcatgttggtgc 462

                                                                       
Query: 413 aagtaatctgagatggttgcttgagcctgtcgatggtatgtggttgcagactcgagaaat 472
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 aagtaatctgaaatggttgcttgagcctgtcgatggtatgtggttgcagactcgagaaat 402

                                                                       
Query: 473 gttccatacacatgaactgctcttttagtgtaaggcttaagagtacccctaactttctca 532
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 401 gttccatacacatgaactgctcttttagtgtaaggcttaagagtactcctaactttctca 342

                                                                       
Query: 533 acatgtggcttcgtgacctcagcaacttgatcaatgtaaggtttagagatcttcttagct 592
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 acatgtggcttcgtgacctcagcaacttgatcaatgtaaggtttagagatcttcttagct 282

                                                                       
Query: 593 tcctggaagtagggatcagaaatttctttaaatttaataaagtgaggtgtaatagcatcc 652
           |||||||||||||||||||||| |||||||||||| | |||||| |||||||||||||||
Sbjct: 281 tcctggaagtagggatcagaaacttctttaaattttacaaagtggggtgtaatagcatcc 222

                              
Query: 653 ctggatgcttcataaactt 671
           |||||||||||||||||||
Sbjct: 221 ctggatgcttcataaactt 203
to top
>gb|AY224462.1| Oryza sativa (japonica cultivar-group) isolate 23522 unknown mRNA
          Length = 960

 Score =  299 bits (151), Expect = 6e-78
 Identities = 289/335 (86%)
 Strand = Plus / Minus

                                                                       
Query: 277 tctcttctgcttctttgtgcagaaggtttctactagaagcctgtacataataaacacagg 336
           ||||||| |||||||  ||||||| | ||| | |||||||||||| |||||| | |||||
Sbjct: 900 tctcttcggcttcttactgcagaatgcttccattagaagcctgtatataatatagacagg 841

                                                                       
Query: 337 tagcgccagcaaagcagaggccaggaaccaaaccaactccttagtcacaactgcttttgt 396
            |  |||||||||||||| |||||||||||||||||||| || ||| ||| || ||| | 
Sbjct: 840 gatagccagcaaagcagaagccaggaaccaaaccaactctttcgtcgcaagtgatttgga 781

                                                                       
Query: 397 tatttcatgttggtgcaagtaatctgagatggttgcttgagcctgtcgatggtatgtggt 456
           ||  ||||||||||| | ||||||| ||||||||| ||| ||||| ||||||||||||||
Sbjct: 780 tacctcatgttggtgtaggtaatctaagatggttgattgcgcctgccgatggtatgtggt 721

                                                                       
Query: 457 tgcagactcgagaaatgttccatacacatgaactgctcttttagtgtaaggcttaagagt 516
           ||| || || |||||||  ||||||||| |||||||||||||||| || |||||||||||
Sbjct: 720 tgctgattcaagaaatgacccatacacacgaactgctcttttagtatacggcttaagagt 661

                                                                       
Query: 517 acccctaactttctcaacatgtggcttcgtgacctcagcaacttgatcaatgtaaggttt 576
           |   ||||||||||||||||||||||| || ||||||||||||||||||||||| |||||
Sbjct: 660 agttctaactttctcaacatgtggctttgtaacctcagcaacttgatcaatgtagggttt 601

                                              
Query: 577 agagatcttcttagcttcctggaagtagggatcag 611
            |||| |||||| ||||||||||||||||||||||
Sbjct: 600 ggagaacttcttggcttcctggaagtagggatcag 566



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 212 tacttctcagcatgtcggcgcttgtgtctcctattgccatggtt 255
           ||||| |||||||| ||||||||||||||||||| ||| |||||
Sbjct: 959 tacttatcagcatgccggcgcttgtgtctcctatggccgtggtt 916
to top
>ref|XM_483357.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1922

 Score =  297 bits (150), Expect = 2e-77
 Identities = 264/302 (87%)
 Strand = Plus / Minus

                                                                        
Query: 310  tagaagcctgtacataataaacacaggtagcgccagcaaagcagaggccaggaaccaaac 369
            |||||||||||| |||||| | ||||| |  |||||||||||||| ||||||||||||||
Sbjct: 1455 tagaagcctgtatataatatagacagggatagccagcaaagcagaagccaggaaccaaac 1396

                                                                        
Query: 370  caactccttagtcacaactgcttttgttatttcatgttggtgcaagtaatctgagatggt 429
            ||||||||| ||| ||| || ||| | ||  ||||||||||| | ||||||| |||||||
Sbjct: 1395 caactccttcgtcgcaagtgatttggatacctcatgttggtgtaggtaatctaagatggt 1336

                                                                        
Query: 430  tgcttgagcctgtcgatggtatgtggttgcagactcgagaaatgttccatacacatgaac 489
            || ||| ||||| ||||||||||||||||| || || |||||||  ||||||||| ||||
Sbjct: 1335 tgattgcgcctgccgatggtatgtggttgctgattcaagaaatgacccatacacacgaac 1276

                                                                        
Query: 490  tgctcttttagtgtaaggcttaagagtacccctaactttctcaacatgtggcttcgtgac 549
            |||||||||||| || ||||||||||||   ||||||||||||||||||||||| || ||
Sbjct: 1275 tgctcttttagtatacggcttaagagtagttctaactttctcaacatgtggctttgtaac 1216

                                                                        
Query: 550  ctcagcaacttgatcaatgtaaggtttagagatcttcttagcttcctggaagtagggatc 609
            ||||||||||||||||||||| ||||| |||| |||||| ||||||||||||||||||||
Sbjct: 1215 ctcagcaacttgatcaatgtagggtttggagaacttcttggcttcctggaagtagggatc 1156

              
Query: 610  ag 611
            ||
Sbjct: 1155 ag 1154



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 212  tacttctcagcatgtcggcgcttgtgtctcctattgccatggtt 255
            ||||| |||||||| ||||||||||||||||||| ||| |||||
Sbjct: 1544 tacttatcagcatgccggcgcttgtgtctcctatggccgtggtt 1501
to top
>dbj|AK070323.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052N10, full
            insert sequence
          Length = 1922

 Score =  297 bits (150), Expect = 2e-77
 Identities = 264/302 (87%)
 Strand = Plus / Minus

                                                                        
Query: 310  tagaagcctgtacataataaacacaggtagcgccagcaaagcagaggccaggaaccaaac 369
            |||||||||||| |||||| | ||||| |  |||||||||||||| ||||||||||||||
Sbjct: 1454 tagaagcctgtatataatatagacagggatagccagcaaagcagaagccaggaaccaaac 1395

                                                                        
Query: 370  caactccttagtcacaactgcttttgttatttcatgttggtgcaagtaatctgagatggt 429
            ||||||||| ||| ||| || ||| | ||  ||||||||||| | ||||||| |||||||
Sbjct: 1394 caactccttcgtcgcaagtgatttggatacctcatgttggtgtaggtaatctaagatggt 1335

                                                                        
Query: 430  tgcttgagcctgtcgatggtatgtggttgcagactcgagaaatgttccatacacatgaac 489
            || ||| ||||| ||||||||||||||||| || || |||||||  ||||||||| ||||
Sbjct: 1334 tgattgcgcctgccgatggtatgtggttgctgattcaagaaatgacccatacacacgaac 1275

                                                                        
Query: 490  tgctcttttagtgtaaggcttaagagtacccctaactttctcaacatgtggcttcgtgac 549
            |||||||||||| || ||||||||||||   ||||||||||||||||||||||| || ||
Sbjct: 1274 tgctcttttagtatacggcttaagagtagttctaactttctcaacatgtggctttgtaac 1215

                                                                        
Query: 550  ctcagcaacttgatcaatgtaaggtttagagatcttcttagcttcctggaagtagggatc 609
            ||||||||||||||||||||| ||||| |||| |||||| ||||||||||||||||||||
Sbjct: 1214 ctcagcaacttgatcaatgtagggtttggagaacttcttggcttcctggaagtagggatc 1155

              
Query: 610  ag 611
            ||
Sbjct: 1154 ag 1153



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 212  tacttctcagcatgtcggcgcttgtgtctcctattgccatggtt 255
            ||||| |||||||| ||||||||||||||||||| ||| |||||
Sbjct: 1543 tacttatcagcatgccggcgcttgtgtctcctatggccgtggtt 1500
to top
>gb|AY596608.1| Saccharum officinarum clone SCCCRZ1001G11, complete sequence
          Length = 1735

 Score =  270 bits (136), Expect = 6e-69
 Identities = 271/316 (85%)
 Strand = Plus / Plus

                                                                       
Query: 293 gtgcagaaggtttctactagaagcctgtacataataaacacaggtagcgccagcaaagca 352
           ||||||||||| ||||||||||||||||| ||||| || ||||| || || |||||||||
Sbjct: 494 gtgcagaaggtctctactagaagcctgtatataatgaagacaggcagagctagcaaagca 553

                                                                       
Query: 353 gaggccaggaaccaaaccaactccttagtcacaactgcttttgttatttcatgttggtgc 412
           || |||||||||||||| |||||||| ||  ||| || ||||||||| ||||| ||||| 
Sbjct: 554 gaagccaggaaccaaactaactccttcgttgcaaatgattttgttatgtcatgctggtga 613

                                                                       
Query: 413 aagtaatctgagatggttgcttgagcctgtcgatggtatgtggttgcagactcgagaaat 472
           | ||| ||   |||| ||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 614 aggtagtccatgatgcttgcttgagcctgtcgatggtatgtggttgccgactcaagaaat 673

                                                                       
Query: 473 gttccatacacatgaactgctcttttagtgtaaggcttaagagtacccctaactttctca 532
           |  |||||  || |||||||||| |||||||| ||||| ||||||   ||||||||||||
Sbjct: 674 gacccatatgcacgaactgctctcttagtgtatggcttcagagtagttctaactttctca 733

                                                                       
Query: 533 acatgtggcttcgtgacctcagcaacttgatcaatgtaaggtttagagatcttcttagct 592
           ||||||||||| |||| |||||||| ||||||||||||||| ||||| | ||||||  ||
Sbjct: 734 acatgtggcttagtgatctcagcaatttgatcaatgtaaggcttagaaaacttcttgact 793

                           
Query: 593 tcctggaagtagggat 608
           |||||| |||||||||
Sbjct: 794 tcctggtagtagggat 809
to top
>gb|AY107973.1| Zea mays PCO099381 mRNA sequence
          Length = 935

 Score =  234 bits (118), Expect = 3e-58
 Identities = 250/294 (85%)
 Strand = Plus / Minus

                                                                       
Query: 295 gcagaaggtttctactagaagcctgtacataataaacacaggtagcgccagcaaagcaga 354
           |||||||||  |||||||||||||||| ||||| || ||||| || ||||||||||||||
Sbjct: 509 gcagaaggtccctactagaagcctgtatataatgaagacaggcagagccagcaaagcaga 450

                                                                       
Query: 355 ggccaggaaccaaaccaactccttagtcacaactgcttttgttatttcatgttggtgcaa 414
            |||||||||||||| |||||||||||  | | || ||||||||| ||||| ||||| | 
Sbjct: 449 agccaggaaccaaactaactccttagttgccaatgattttgttatatcatgctggtgaag 390

                                                                       
Query: 415 gtaatctgagatggttgcttgagcctgtcgatggtatgtggttgcagactcgagaaatgt 474
           ||| ||   |||| ||||||||||||||||||||||||||||||| |||| |||||||| 
Sbjct: 389 gtagtccatgatgcttgcttgagcctgtcgatggtatgtggttgccgacttgagaaatga 330

                                                                       
Query: 475 tccatacacatgaactgctcttttagtgtaaggcttaagagtacccctaactttctcaac 534
            |||||  ||||||||||||| |||||||| ||||| ||||||   |||| |||||||||
Sbjct: 329 cccatatgcatgaactgctctcttagtgtatggcttcagagtagttctaattttctcaac 270

                                                                 
Query: 535 atgtggcttcgtgacctcagcaacttgatcaatgtaaggtttagagatcttctt 588
           |||||| || || | |||||||| ||||||||||||||| ||||| | ||||||
Sbjct: 269 atgtggtttagtaatctcagcaatttgatcaatgtaaggcttagaaaacttctt 216



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 212 tacttctcagcatgtcggcgcttgtgtctcctattgccatggtt 255
           ||||| ||||||||||| ||||||| |||| | | |||||||||
Sbjct: 589 tacttgtcagcatgtcgccgcttgtatctcttgtggccatggtt 546
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  172 bits (87), Expect = 1e-39
 Identities = 141/159 (88%)
 Strand = Plus / Plus

                                                                            
Query: 438      cctgtcgatggtatgtggttgcagactcgagaaatgttccatacacatgaactgctcttt 497
                |||| ||||||||||||||||| || || |||||||  ||||||||| ||||||||||||
Sbjct: 25793085 cctgccgatggtatgtggttgctgattcaagaaatgacccatacacacgaactgctcttt 25793144

                                                                            
Query: 498      tagtgtaaggcttaagagtacccctaactttctcaacatgtggcttcgtgacctcagcaa 557
                |||| || ||||||||||||   ||||||||||||||||||||||| || ||||||||||
Sbjct: 25793145 tagtatacggcttaagagtagttctaactttctcaacatgtggctttgtaacctcagcaa 25793204

                                                       
Query: 558      cttgatcaatgtaaggtttagagatcttcttagcttcct 596
                ||||||||||||| ||||| |||| |||||| |||||||
Sbjct: 25793205 cttgatcaatgtagggtttggagaacttcttggcttcct 25793243



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 71/84 (84%)
 Strand = Plus / Plus

                                                                            
Query: 357      ccaggaaccaaaccaactccttagtcacaactgcttttgttatttcatgttggtgcaagt 416
                |||||||||||||||||||||| ||| ||| || ||| | ||  ||||||||||| | ||
Sbjct: 25792720 ccaggaaccaaaccaactccttcgtcgcaagtgatttggatacctcatgttggtgtaggt 25792779

                                        
Query: 417      aatctgagatggttgcttgagcct 440
                ||||| ||||||||| ||| ||||
Sbjct: 25792780 aatctaagatggttgattgcgcct 25792803



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                            
Query: 212      tacttctcagcatgtcggcgcttgtgtctcctattgccatggtt 255
                ||||| |||||||| ||||||||||||||||||| ||| |||||
Sbjct: 25792411 tacttatcagcatgccggcgcttgtgtctcctatggccgtggtt 25792454



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                             
Query: 310      tagaagcctgtacataataaacacaggtagcgccagcaaagcaga 354
                |||||||||||| |||||| | ||||| |  ||||||||||||||
Sbjct: 25792604 tagaagcctgtatataatatagacagggatagccagcaaagcaga 25792648
to top
>dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0689E12
          Length = 147516

 Score =  172 bits (87), Expect = 1e-39
 Identities = 141/159 (88%)
 Strand = Plus / Plus

                                                                         
Query: 438   cctgtcgatggtatgtggttgcagactcgagaaatgttccatacacatgaactgctcttt 497
             |||| ||||||||||||||||| || || |||||||  ||||||||| ||||||||||||
Sbjct: 65296 cctgccgatggtatgtggttgctgattcaagaaatgacccatacacacgaactgctcttt 65355

                                                                         
Query: 498   tagtgtaaggcttaagagtacccctaactttctcaacatgtggcttcgtgacctcagcaa 557
             |||| || ||||||||||||   ||||||||||||||||||||||| || ||||||||||
Sbjct: 65356 tagtatacggcttaagagtagttctaactttctcaacatgtggctttgtaacctcagcaa 65415

                                                    
Query: 558   cttgatcaatgtaaggtttagagatcttcttagcttcct 596
             ||||||||||||| ||||| |||| |||||| |||||||
Sbjct: 65416 cttgatcaatgtagggtttggagaacttcttggcttcct 65454



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 71/84 (84%)
 Strand = Plus / Plus

                                                                         
Query: 357   ccaggaaccaaaccaactccttagtcacaactgcttttgttatttcatgttggtgcaagt 416
             |||||||||||||||||||||| ||| ||| || ||| | ||  ||||||||||| | ||
Sbjct: 64931 ccaggaaccaaaccaactccttcgtcgcaagtgatttggatacctcatgttggtgtaggt 64990

                                     
Query: 417   aatctgagatggttgcttgagcct 440
             ||||| ||||||||| ||| ||||
Sbjct: 64991 aatctaagatggttgattgcgcct 65014



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                         
Query: 212   tacttctcagcatgtcggcgcttgtgtctcctattgccatggtt 255
             ||||| |||||||| ||||||||||||||||||| ||| |||||
Sbjct: 64622 tacttatcagcatgccggcgcttgtgtctcctatggccgtggtt 64665



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                          
Query: 310   tagaagcctgtacataataaacacaggtagcgccagcaaagcaga 354
             |||||||||||| |||||| | ||||| |  ||||||||||||||
Sbjct: 64815 tagaagcctgtatataatatagacagggatagccagcaaagcaga 64859
to top
>dbj|AB118016.1| Oryza sativa (japonica cultivar-group) bip129 mRNA for BRI1-KD
           interacting protein 129, partial cds
          Length = 522

 Score =  141 bits (71), Expect = 3e-30
 Identities = 155/183 (84%)
 Strand = Plus / Minus

                                                                       
Query: 277 tctcttctgcttctttgtgcagaaggtttctactagaagcctgtacataataaacacagg 336
           ||||||| |||||||  ||||||| | ||| | |||||||||||| |||||| | |||||
Sbjct: 187 tctcttcggcttcttactgcagaatgcttccattagaagcctgtatataatatagacagg 128

                                                                       
Query: 337 tagcgccagcaaagcagaggccaggaaccaaaccaactccttagtcacaactgcttttgt 396
            |  |||||||||||||| ||||||||||||||||||||||| ||| ||| || ||| | 
Sbjct: 127 gatagccagcaaagcagaagccaggaaccaaaccaactccttcgtcgcaagtgatttgga 68

                                                                       
Query: 397 tatttcatgttggtgcaagtaatctgagatggttgcttgagcctgtcgatggtatgtggt 456
           ||  ||||||||||| | ||||||| ||||||||| ||| ||||| ||||||||||||||
Sbjct: 67  tacctcatgttggtgtaggtaatctaagatggttgattgcgcctgccgatggtatgtggt 8

              
Query: 457 tgc 459
           |||
Sbjct: 7   tgc 5



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 212 tacttctcagcatgtcggcgcttgtgtctcctattgccatggtt 255
           ||||| |||||||| ||||||||||||||||||| ||| |||||
Sbjct: 246 tacttatcagcatgccggcgcttgtgtctcctatggccgtggtt 203
to top
>dbj|AK101485.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041K01, full
            insert sequence
          Length = 1859

 Score =  121 bits (61), Expect = 3e-24
 Identities = 217/269 (80%)
 Strand = Plus / Minus

                                                                        
Query: 343  cagcaaagcagaggccaggaaccaaaccaactccttagtcacaactgcttttgttatttc 402
            ||||||| |||| |||||| ||||  ||||||| | |||| ||| | ||||||| | |||
Sbjct: 1334 cagcaaaacagaagccaggtaccaggccaactcttcagtcgcaaattcttttgtcaattc 1275

                                                                        
Query: 403  atgttggtgcaagtaatctgagatggttgcttgagcctgtcgatggtatgtggttgcaga 462
            ||||||||||| ||| ||  |||  ||||||||||||||| |||| || |  || ||   
Sbjct: 1274 atgttggtgcaggtagtccaagacagttgcttgagcctgttgatgataagctgtagcctt 1215

                                                                        
Query: 463  ctcgagaaatgttccatacacatgaactgctcttttagtgtaaggcttaagagtacccct 522
            ||| |||||  ||||||| | ||| ||||||||||| || |||||||| | |  |   ||
Sbjct: 1214 ctcaagaaaatttccatatatatggactgctctttttgtataaggcttcaaataaattct 1155

                                                                        
Query: 523  aactttctcaacatgtggcttcgtgacctcagcaacttgatcaatgtaaggtttagagat 582
            || |||||| ||||||||||| ||| ||| |||||||||||||||||||||||| || | 
Sbjct: 1154 aattttctcgacatgtggcttagtggccttagcaacttgatcaatgtaaggtttggatac 1095

                                         
Query: 583  cttcttagcttcctggaagtagggatcag 611
             ||||| ||||||||||||||||||||||
Sbjct: 1094 tttcttggcttcctggaagtagggatcag 1066
to top
>gb|BT017482.1| Zea mays clone EL01N0412B11.c mRNA sequence
          Length = 1016

 Score =  107 bits (54), Expect = 5e-20
 Identities = 123/146 (84%)
 Strand = Plus / Minus

                                                                       
Query: 295 gcagaaggtttctactagaagcctgtacataataaacacaggtagcgccagcaaagcaga 354
           |||||||||  |||||||||||||||| ||||| || ||||| || ||||||||||||||
Sbjct: 605 gcagaaggtccctactagaagcctgtatataatgaagacaggcagagccagcaaagcaga 546

                                                                       
Query: 355 ggccaggaaccaaaccaactccttagtcacaactgcttttgttatttcatgttggtgcaa 414
            |||||||||||||| |||||||||||  | | || ||||||||| ||||| ||||| | 
Sbjct: 545 agccaggaaccaaactaactccttagttgccaatgattttgttatatcatgctggtgaag 486

                                     
Query: 415 gtaatctgagatggttgcttgagcct 440
           ||| ||   |||| ||||||||||||
Sbjct: 485 gtagtccatgatgcttgcttgagcct 460



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 212 tacttctcagcatgtcggcgcttgtgtctcctattgccatggtt 255
           ||||| ||||||||||| ||||||| |||| | | |||||||||
Sbjct: 685 tacttgtcagcatgtcgccgcttgtatctcttgtggccatggtt 642
to top
>gb|AC099404.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
            OSJNBa0019D02, complete sequence
          Length = 154692

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                        
Query: 521  ctaactttctcaacatgtggcttcgtgacctcagcaacttgatcaatgtaaggtttagag 580
            |||| |||||| ||||||||||| ||| ||| |||||||||||||||||||||||| || 
Sbjct: 2446 ctaattttctcgacatgtggcttagtggccttagcaacttgatcaatgtaaggtttggat 2387

                             
Query: 581  atcttcttagcttcctg 597
            |  ||||| ||||||||
Sbjct: 2386 actttcttggcttcctg 2370



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 60/73 (82%)
 Strand = Plus / Minus

                                                                        
Query: 369  ccaactccttagtcacaactgcttttgttatttcatgttggtgcaagtaatctgagatgg 428
            ||||||| | |||| ||| | ||||||| | |||||||||||||| ||| ||  |||  |
Sbjct: 3231 ccaactcttcagtcgcaaattcttttgtcaattcatgttggtgcaggtagtccaagacag 3172

                         
Query: 429  ttgcttgagcctg 441
            |||||||||||||
Sbjct: 3171 ttgcttgagcctg 3159
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                            
Query: 521      ctaactttctcaacatgtggcttcgtgacctcagcaacttgatcaatgtaaggtttagag 580
                |||| |||||| ||||||||||| ||| ||| |||||||||||||||||||||||| || 
Sbjct: 18957184 ctaattttctcgacatgtggcttagtggccttagcaacttgatcaatgtaaggtttggat 18957125

                                 
Query: 581      atcttcttagcttcctg 597
                |  ||||| ||||||||
Sbjct: 18957124 actttcttggcttcctg 18957108



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 60/73 (82%)
 Strand = Plus / Minus

                                                                            
Query: 369      ccaactccttagtcacaactgcttttgttatttcatgttggtgcaagtaatctgagatgg 428
                ||||||| | |||| ||| | ||||||| | |||||||||||||| ||| ||  |||  |
Sbjct: 18957969 ccaactcttcagtcgcaaattcttttgtcaattcatgttggtgcaggtagtccaagacag 18957910

                             
Query: 429      ttgcttgagcctg 441
                |||||||||||||
Sbjct: 18957909 ttgcttgagcctg 18957897



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 612      aaatttctttaaatttaataaagt 635
                ||||||||||||||||||| ||||
Sbjct: 12139497 aaatttctttaaatttaatcaagt 12139474
to top
>emb|X95271.1|OSMAR O.sativa matrix association region
          Length = 366

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                       
Query: 526 tttctcaacatgtggcttcgtgacctcagcaacttgatcaatgtaaggtttagagatctt 585
           |||||| ||||||||||| ||| ||| |||||||||||||||||||||||| || |  ||
Sbjct: 185 tttctcgacatgtggcttagtggccttagcaacttgatcaatgtaaggtttggatacttt 126

                       
Query: 586 cttagcttcctg 597
           ||| ||||||||
Sbjct: 125 cttggcttcctg 114
to top
>ref|XM_875782.1| PREDICTED: Bos taurus similar to selenoprotein S, transcript variant
            3 (LOC512276), mRNA
          Length = 1351

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 610  agaaatttctttaaatttaataaag 634
            |||||||||||||||||||||||||
Sbjct: 1271 agaaatttctttaaatttaataaag 1247
to top
>ref|XM_589759.2| PREDICTED: Bos taurus similar to selenoprotein S, transcript variant
            1 (LOC512276), mRNA
          Length = 1247

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 610  agaaatttctttaaatttaataaag 634
            |||||||||||||||||||||||||
Sbjct: 1167 agaaatttctttaaatttaataaag 1143
to top
>gb|BC112740.1| Bos taurus similar to selenoprotein S, transcript variant 1, mRNA
            (cDNA clone MGC:137429 IMAGE:8167446), complete cds
          Length = 1255

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 610  agaaatttctttaaatttaataaag 634
            |||||||||||||||||||||||||
Sbjct: 1174 agaaatttctttaaatttaataaag 1150
to top
>gb|AY109930.1| Zea mays CL12284_1 mRNA sequence
          Length = 1059

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 154/195 (78%), Gaps = 2/195 (1%)
 Strand = Plus / Plus

                                                                       
Query: 347 aaagcagaggccaggaaccaaaccaactccttagtcacaa-ctgcttttgttatttcatg 405
           |||||||| |||||  |||| |||||||| ||||| |||| ||| |||||| |  |||||
Sbjct: 459 aaagcagaagccagataccacaccaactctttagttacaaactg-ttttgtaaactcatg 517

                                                                       
Query: 406 ttggtgcaagtaatctgagatggttgcttgagcctgtcgatggtatgtggttgcagactc 465
             |||| | |||||| ||||| ||||| ||||||||  |||| ||||| || || | |||
Sbjct: 518 ccggtgaaggtaatccgagatagttgcctgagcctgctgatgatatgtagtagctgtctc 577

                                                                       
Query: 466 gagaaatgttccatacacatgaactgctcttttagtgtaaggcttaagagtacccctaac 525
            |||||   |||||| |||||   |||||||| ||| |||||||| |||| |   |||||
Sbjct: 578 aagaaactgtccatatacatgtcgtgctctttcagtataaggcttgagagcagttctaac 637

                          
Query: 526 tttctcaacatgtgg 540
           |||||| ||||||||
Sbjct: 638 tttctcgacatgtgg 652
to top
>gb|AC134397.6| Mus musculus chromosome 13, clone RP23-265J12, complete sequence
          Length = 192662

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 612    aaatttctttaaatttaataaa 633
              ||||||||||||||||||||||
Sbjct: 191926 aaatttctttaaatttaataaa 191905
to top
>gb|AC154460.2| Mus musculus BAC clone RP24-163G22 from chromosome 13, complete sequence
          Length = 197149

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 612    aaatttctttaaatttaataaa 633
              ||||||||||||||||||||||
Sbjct: 105201 aaatttctttaaatttaataaa 105180
to top
>emb|BX088720.8| Zebrafish DNA sequence from clone CH211-195M2 in linkage group 22,
             complete sequence
          Length = 190269

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 609   cagaaatttctttaaatttaat 630
             ||||||||||||||||||||||
Sbjct: 65193 cagaaatttctttaaatttaat 65172
to top
>emb|CR854834.11| Zebrafish DNA sequence from clone DKEYP-92B10 in linkage group 11,
             complete sequence
          Length = 140484

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 609   cagaaatttctttaaatttaa 629
             |||||||||||||||||||||
Sbjct: 21793 cagaaatttctttaaatttaa 21813
to top
>gb|AC098587.5| Homo sapiens BAC clone RP11-231C18 from 4, complete sequence
          Length = 132164

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 421   tgagatggttgcttgagcctg 441
             |||||||||||||||||||||
Sbjct: 66402 tgagatggttgcttgagcctg 66382
to top
>emb|AL359836.16| Human DNA sequence from clone RP11-389E6 on chromosome 10 Contains the
             5' end of gene LOC118987 and a CpG island, complete
             sequence
          Length = 49052

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 348   aagcagaggccaggaaccaaa 368
             |||||||||||||||||||||
Sbjct: 32197 aagcagaggccaggaaccaaa 32177
to top
>emb|AL023806.1|HS466P17 Human DNA sequence from clone RP3-466P17 on chromosome 6q24 Contains
             the 5' end of the EPM2A gene for progressive myoclonus
             type 2 epilepsy (Lafora disease) protein (laforin) and a
             CpG island, complete sequence
          Length = 149963

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 85    gcaaaaggaaaacaaaaaatc 105
             |||||||||||||||||||||
Sbjct: 12459 gcaaaaggaaaacaaaaaatc 12439
to top
>emb|BX248505.8| Zebrafish DNA sequence from clone CH211-87L2 in linkage group 14,
              complete sequence
          Length = 189425

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 609    cagaaatttctttaaatttaa 629
              |||||||||||||||||||||
Sbjct: 149539 cagaaatttctttaaatttaa 149519
to top
>emb|BX255919.15| Zebrafish DNA sequence from clone DKEY-259P11 in linkage group 8,
              complete sequence
          Length = 168607

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 609    cagaaatttctttaaatttaa 629
              |||||||||||||||||||||
Sbjct: 116244 cagaaatttctttaaatttaa 116224
to top
>gb|AF214462.1| Hericium coralloides small subunit ribosomal RNA gene, partial
           sequence; mitochondrial gene for mitochondrial product
          Length = 1765

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 614 atttctttaaatttaataaag 634
           |||||||||||||||||||||
Sbjct: 132 atttctttaaatttaataaag 152
to top
>emb|BX004833.16| Zebrafish DNA sequence from clone DKEY-153J5 in linkage group 17,
              complete sequence
          Length = 216190

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 609    cagaaatttctttaaatttaa 629
              |||||||||||||||||||||
Sbjct: 131944 cagaaatttctttaaatttaa 131924
to top
>gb|AC005887.3|AC005887 citb_173_i_12, complete sequence
          Length = 120578

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 348   aagcagaggccaggaaccaaa 368
             |||||||||||||||||||||
Sbjct: 51546 aagcagaggccaggaaccaaa 51566
to top
>emb|BX927240.11| Zebrafish DNA sequence from clone DKEY-16N13 in linkage group 18,
             complete sequence
          Length = 263615

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 609   cagaaatttctttaaatttaa 629
             |||||||||||||||||||||
Sbjct: 54409 cagaaatttctttaaatttaa 54429
to top
>emb|CR855277.16| Zebrafish DNA sequence from clone DKEY-71B5 in linkage group 16, complete
              sequence
          Length = 245559

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 609    cagaaatttctttaaatttaa 629
              |||||||||||||||||||||
Sbjct: 119009 cagaaatttctttaaatttaa 118989
to top
>emb|AL772219.7| Zebrafish DNA sequence from clone DKEY-51K10 in linkage group 17,
             complete sequence
          Length = 117244

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 609   cagaaatttctttaaatttaa 629
             |||||||||||||||||||||
Sbjct: 20217 cagaaatttctttaaatttaa 20197
to top
>gb|AC164981.2| Mus musculus BAC clone RP23-121F5 from chromosome 17, complete sequence
          Length = 243701

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 286   cttctttgtgcagaaggttt 305
             ||||||||||||||||||||
Sbjct: 65786 cttctttgtgcagaaggttt 65767
to top
>gb|AC162614.2| Mus musculus chromosome 7, clone RP23-421O10, complete sequence
          Length = 219414

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 343   cagcaaagcagaggccagga 362
             ||||||||||||||||||||
Sbjct: 26451 cagcaaagcagaggccagga 26470
to top
>gb|AC119211.8| Mus musculus chromosome 7, clone RP24-191C15, complete sequence
          Length = 172286

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 343   cagcaaagcagaggccagga 362
             ||||||||||||||||||||
Sbjct: 55075 cagcaaagcagaggccagga 55056
to top
>gb|AC117082.2| Dictyostelium discoideum chromosome 2 map complement(6807709-6776860)
            strain AX4, complete sequence
          Length = 30849

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 611  gaaatttctttaaatttaataaag 634
            ||||||||||||||||||| ||||
Sbjct: 4621 gaaatttctttaaatttaaaaaag 4644
to top
>gb|AC174830.3| Myotis lucifugus clone CH235-234J19, complete sequence
          Length = 196835

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    caaaaggaaaacaaaaaatc 105
             ||||||||||||||||||||
Sbjct: 35354 caaaaggaaaacaaaaaatc 35373
to top
>emb|AL355347.16| Human DNA sequence from clone RP11-506N21 on chromosome 6 Contains part
             of the KHDRBS2 gene for KH domain containing RNA binding
             signal transduction associated protein 2, complete
             sequence
          Length = 86298

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 469   aaatgttccatacacatgaa 488
             ||||||||||||||||||||
Sbjct: 73354 aaatgttccatacacatgaa 73335
to top
>gb|AC148205.3| Callicebus moloch clone LB5-314H24, complete sequence
          Length = 153386

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 615    tttctttaaatttaataaag 634
              ||||||||||||||||||||
Sbjct: 142186 tttctttaaatttaataaag 142167
to top
>emb|CR548612.1| Paramecium tetraurelia macronuclear largest chromosome, complete sequence
          Length = 984602

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 565    aatgtaaggtttagagatcttctt 588
              |||||||||||||||||| |||||
Sbjct: 534867 aatgtaaggtttagagatattctt 534844
to top
>emb|AL844905.5| Mouse DNA sequence from clone RP23-384C15 on chromosome 4 Contains an
             NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10
             (Ndufa10) pseudogene, complete sequence
          Length = 153205

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 610   agaaatttctttaaatttaa 629
             ||||||||||||||||||||
Sbjct: 49795 agaaatttctttaaatttaa 49776
to top
>emb|BX511263.7| Zebrafish DNA sequence from clone DKEY-204K5 in linkage group 17,
             complete sequence
          Length = 178207

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 610   agaaatttctttaaatttaa 629
             ||||||||||||||||||||
Sbjct: 87513 agaaatttctttaaatttaa 87494
to top
>gb|AC113168.2| Homo sapiens chromosome 3 clone RP11-268B23, complete sequence
          Length = 158868

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 421  tgagatggttgcttgagcct 440
            ||||||||||||||||||||
Sbjct: 7966 tgagatggttgcttgagcct 7947
to top
>gb|AC112220.2| Homo sapiens chromosome 3 clone RP11-10C24, complete sequence
          Length = 152227

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 421   tgagatggttgcttgagcct 440
             ||||||||||||||||||||
Sbjct: 33215 tgagatggttgcttgagcct 33196
to top
>gb|AC099773.6| Mus Musculus Strain C57BL6/J Chromosome 5 RP23-335D24, Complete Sequence,
              complete sequence
          Length = 191559

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 388    tgcttttgttatttcatgtt 407
              ||||||||||||||||||||
Sbjct: 102110 tgcttttgttatttcatgtt 102129
to top
>gb|AC016868.8| Homo sapiens chromosome 8, clone RP11-15G16, complete sequence
          Length = 155691

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    gcaaaaggaaaacaaaaaat 104
             ||||||||||||||||||||
Sbjct: 38279 gcaaaaggaaaacaaaaaat 38298
to top
>gb|AC016602.7| Homo sapiens chromosome 5 clone CTD-2061O12, complete sequence
          Length = 186265

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 86     caaaaggaaaacaaaaaatctggt 109
              ||||||||||| ||||||||||||
Sbjct: 181826 caaaaggaaaaaaaaaaatctggt 181803
to top
>gb|AC102528.20| Mus musculus chromosome 5, clone RP23-30D20, complete sequence
          Length = 241925

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 615   tttctttaaatttaataaag 634
             ||||||||||||||||||||
Sbjct: 41572 tttctttaaatttaataaag 41553
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 611      gaaatttctttaaatttaat 630
                ||||||||||||||||||||
Sbjct: 27934451 gaaatttctttaaatttaat 27934432
to top
>gb|AC025754.4|AC025754 Homo sapiens chromosome 5 clone CTD-2024P10, complete sequence
          Length = 157365

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 86    caaaaggaaaacaaaaaatctggt 109
             ||||||||||| ||||||||||||
Sbjct: 70546 caaaaggaaaaaaaaaaatctggt 70569
to top
>gb|AF204951.2|AF204951 Ectocarpus siliculosus virus, complete genome
          Length = 335593

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 611    gaaatttctttaaatttaat 630
              ||||||||||||||||||||
Sbjct: 117178 gaaatttctttaaatttaat 117197
to top
>dbj|AP003723.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0003H08
          Length = 142068

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 611   gaaatttctttaaatttaat 630
             ||||||||||||||||||||
Sbjct: 88374 gaaatttctttaaatttaat 88355
to top
>dbj|AP005580.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1759_F09
          Length = 149501

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 612   aaatttctttaaatttaataaagt 635
             ||||||||||||||||||| ||||
Sbjct: 50956 aaatttctttaaatttaatcaagt 50933
to top
>dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0564H06
          Length = 146823

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 612   aaatttctttaaatttaataaagt 635
             ||||||||||||||||||| ||||
Sbjct: 73876 aaatttctttaaatttaatcaagt 73853
to top
>dbj|AP001525.6| Homo sapiens genomic DNA, chromosome 18 clone:RP11-720L3, complete
              sequence
          Length = 175581

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 88     aaaggaaaacaaaaaatctg 107
              ||||||||||||||||||||
Sbjct: 132030 aaaggaaaacaaaaaatctg 132011
to top
>gb|AY609646.1| Sus scrofa clone Clu_23229.scr.msk.p1.Contig1, mRNA sequence
          Length = 1167

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 611  gaaatttctttaaatttaataaag 634
            |||||||| |||||||||||||||
Sbjct: 1149 gaaatttccttaaatttaataaag 1126
to top
>gb|AE015925.1| Chlamydophila caviae GPIC, complete genome
          Length = 1173390

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 487    aactgctcttttagtgtaag 506
              ||||||||||||||||||||
Sbjct: 403810 aactgctcttttagtgtaag 403829
to top
>gb|AC134435.3| Mus musculus BAC clone RP24-423J19 from 1, complete sequence
          Length = 225687

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 317    ctgtacataataaacacagg 336
              ||||||||||||||||||||
Sbjct: 211802 ctgtacataataaacacagg 211783
to top
>gb|DP000019.1| Callicebus moloch target 1 genomic scaffold
          Length = 2105003

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 615     tttctttaaatttaataaag 634
               ||||||||||||||||||||
Sbjct: 1056738 tttctttaaatttaataaag 1056719


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,917,383
Number of Sequences: 3902068
Number of extensions: 7917383
Number of successful extensions: 165755
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 165380
Number of HSP's gapped (non-prelim): 374
length of query: 673
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 650
effective length of database: 17,143,297,704
effective search space: 11143143507600
effective search space used: 11143143507600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top