ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags31b20 |
|---|---|
| Clone Library Name | barley_pub |
>WDR1_CAEEL (Q11176) Actin-interacting protein 1 (AIP1) (Uncoordinated protein| 78) Length = 611 Score = 47.0 bits (110), Expect = 2e-05 Identities = 21/58 (36%), Positives = 38/58 (65%), Gaps = 1/58 (1%) Frame = -3 Query: 464 ATGSLDTCAIIYDVDKPASSRSTIKGAH-LGGVHGXSFTDNDTLVTAGEDACVRVWKL 294 ATGSLD I+++++KP+ IKGAH + V+ + + T+V+AG+D+ ++ W + Sbjct: 552 ATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 609
>WD42_DICDI (P54686) WD-repeat protein 2| Length = 597 Score = 46.6 bits (109), Expect = 3e-05 Identities = 18/55 (32%), Positives = 35/55 (63%) Frame = -3 Query: 464 ATGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFTDNDTLVTAGEDACVRVW 300 A+ SLD+ I++V+ P +S +K +HLGGV+ + N+ + +AG + +++W Sbjct: 539 ASASLDSQIYIWNVENPTASPVQVKNSHLGGVNDVIYGSNNEIFSAGNEGAIKIW 593 Score = 29.3 bits (64), Expect = 5.2 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Frame = -3 Query: 383 HLGGVHGXSFT-DNDTLVTAGEDACVRVWKLAAQQ 282 H GG++G S++ DN+ ++TA D ++W Q Sbjct: 235 HTGGIYGCSWSADNNRVLTASADKSCKIWDTTTGQ 269
>AIP1_YEAST (P46680) Actin-interacting protein 1| Length = 615 Score = 45.1 bits (105), Expect = 9e-05 Identities = 23/60 (38%), Positives = 33/60 (55%) Frame = -3 Query: 464 ATGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFTDNDTLVTAGEDACVRVWKLAAQ 285 ATGSLDT IY V +P + AH GV+ + TLV++G DAC++ W + + Sbjct: 557 ATGSLDTNIFIYSVKRPMKIIKALN-AHKDGVNNLLWETPSTLVSSGADACIKRWNVVLE 615 Score = 30.0 bits (66), Expect = 3.1 Identities = 11/32 (34%), Positives = 17/32 (53%) Frame = -3 Query: 377 GGVHGXSFTDNDTLVTAGEDACVRVWKLAAQQ 282 GG+ S+ D+ T G DA +RVW + + Sbjct: 254 GGIFALSWLDSQKFATVGADATIRVWDVTTSK 285
>WD66_PHYPO (P90587) 66 kDa stress protein (p66)| Length = 601 Score = 44.7 bits (104), Expect = 1e-04 Identities = 21/56 (37%), Positives = 32/56 (57%) Frame = -3 Query: 461 TGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFTDNDTLVTAGEDACVRVWKL 294 TGSLD+ ++ V +P S IK AH GGV+ + D T+ +AG D ++ W + Sbjct: 545 TGSLDSHVYVWSVSEP-SKHIAIKNAHRGGVNAVLWVDEHTVASAGLDCSIKTWTI 599
>WDR1_DROME (Q9VU68) Putative actin-interacting protein 1 (AIP1)| Length = 608 Score = 39.7 bits (91), Expect = 0.004 Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Frame = -3 Query: 464 ATGSLDTCAIIYDVDKPASSRSTIKGAH-LGGVHGXSFTDNDTLVTAGEDACVRVW 300 A+GSLDT II+ V PA + IK AH + + DN+T+++ G+D +VW Sbjct: 549 ASGSLDTTIIIWSVANPAK-HTIIKNAHPQSQITRLVWLDNNTVISTGQDCNTKVW 603
>KTNB1_ARATH (Q8H0T9) Katanin p80 WD40-containing subunit B1 homolog 1| Length = 837 Score = 38.5 bits (88), Expect = 0.009 Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 1/60 (1%) Frame = -3 Query: 464 ATGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFT-DNDTLVTAGEDACVRVWKLAA 288 A+GSLDT I+D+ K T KG H GV+ FT D +V+ GED V+VW L A Sbjct: 117 ASGSLDTNLKIWDIRKKGCIH-TYKG-HTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTA 174
>YE85_SCHPO (O14301) Hypothetical WD-repeat protein C9G1.05 in chromosome I| Length = 595 Score = 38.1 bits (87), Expect = 0.011 Identities = 20/57 (35%), Positives = 31/57 (54%) Frame = -3 Query: 464 ATGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFTDNDTLVTAGEDACVRVWKL 294 AT SLDT IY V++P + +K AH G + + L++ G DA ++VW + Sbjct: 538 ATASLDTNIHIYSVERPMKYIA-MKNAHSLGATQVEWVSENELLSTGSDAAIKVWSV 593
>APAF_BRARE (Q9I9H8) Apoptotic protease-activating factor 1 (Apaf-1)| Length = 1261 Score = 37.4 bits (85), Expect = 0.019 Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Frame = -3 Query: 464 ATGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFTDN-DTLVTAGEDACVRVWK 297 A GS D + +V P+S S H VH FTD+ + L+T+ ED+ +RVWK Sbjct: 982 ALGSEDGTVQVIEV--PSSKASVKLSGHTKTVHHCQFTDDCEILITSSEDSTIRVWK 1036
>WDR1_CHICK (O93277) WD-repeat protein 1 (Actin-interacting protein 1) (AIP1)| Length = 609 Score = 36.2 bits (82), Expect = 0.043 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Frame = -3 Query: 464 ATGSLDTCAIIYDVDKPASSRSTIKGAH-LGGVHGXSFTDNDTLVTAGEDACVRVWKLA 291 A+G +D ++ V P +R I AH L V G ++ D TLVT DA V+ W ++ Sbjct: 550 ASGGMDMMVYVWTVSDP-ETRIKIPDAHRLHHVSGLAWLDEHTLVTTSHDASVKEWSIS 607
>STRAP_MOUSE (Q9Z1Z2) Serine-threonine kinase receptor-associated protein| (UNR-interacting protein) Length = 351 Score = 35.8 bits (81), Expect = 0.056 Identities = 19/73 (26%), Positives = 35/73 (47%) Frame = -3 Query: 461 TGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFTDNDTLVTAGEDACVRVWKLAAQQ 282 TG D IYD++KP + I G H G+ + +D + + +D VR+W A Sbjct: 117 TGGQDKLLRIYDLNKPEAEPKEISG-HTSGIKKALWCSDDKQILSADDKTVRLWDHATMT 175 Query: 281 *ARILVHQLAMAA 243 + L +++++ Sbjct: 176 EVKSLNFNMSVSS 188
>STRAP_HUMAN (Q9Y3F4) Serine-threonine kinase receptor-associated protein| (UNR-interacting protein) (WD-40 repeat protein PT-WD) (MAP activator with WD repeats) Length = 350 Score = 35.4 bits (80), Expect = 0.073 Identities = 19/73 (26%), Positives = 34/73 (46%) Frame = -3 Query: 461 TGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFTDNDTLVTAGEDACVRVWKLAAQQ 282 TG D IYD++KP + I G H G+ + D + + +D VR+W A Sbjct: 117 TGGQDKLLRIYDLNKPEAEPKEISG-HTSGIKKALWCSEDKQILSADDKTVRLWDHATMT 175 Query: 281 *ARILVHQLAMAA 243 + L +++++ Sbjct: 176 EVKSLNFNMSVSS 188
>CDC4_CANAL (P53699) Cell division control protein 4| Length = 684 Score = 34.3 bits (77), Expect = 0.16 Identities = 22/60 (36%), Positives = 25/60 (41%) Frame = -3 Query: 461 TGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFTDNDTLVTAGEDACVRVWKLAAQQ 282 TG D C IY + H GGV +T N TLVT D VRVW + Q Sbjct: 340 TGVDDKCISIYSTQ--TGQLMKVLEGHEGGVWALKYTGN-TLVTGSTDRTVRVWNMKTGQ 396
>CTX80_EUPOC (Q9N9X3) Ciliary WD repeat-containing protein ctxp80| Length = 716 Score = 33.9 bits (76), Expect = 0.21 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = -3 Query: 434 IYDVDKPASSRSTIKGAHLGGVHGXSFTDNDTLVTAGEDACVRVWKL 294 I ++D + + +K G G + D DT VT+G+D + VW L Sbjct: 408 ILEIDSKGTKKEIMKSHSDGEAWGLAVADKDTFVTSGDDNKIYVWDL 454
>TAF5_HUMAN (Q15542) Transcription initiation factor TFIID subunit 5| (Transcription initiation factor TFIID 100 kDa subunit) (TAF(II)100) (TAFII-100) (TAFII100) Length = 800 Score = 33.9 bits (76), Expect = 0.21 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Frame = -3 Query: 425 VDKPASSRSTIKGAHLGGVHGXSFT-DNDTLVTAGEDACVRVWKL 294 +D+ +S I H G V+G SF+ D + L+++ ED VR+W L Sbjct: 528 MDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL 572
>TAF5_MOUSE (Q8C092) Transcription initiation factor TFIID subunit 5| (Transcription initiation factor TFIID 100 kDa subunit) (TAF(II)100) (TAFII-100) (TAFII100) Length = 801 Score = 33.9 bits (76), Expect = 0.21 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Frame = -3 Query: 425 VDKPASSRSTIKGAHLGGVHGXSFT-DNDTLVTAGEDACVRVWKL 294 +D+ +S I H G V+G SF+ D + L+++ ED VR+W L Sbjct: 529 MDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL 573
>WDR26_HUMAN (Q9H7D7) WD-repeat protein 26| Length = 514 Score = 33.5 bits (75), Expect = 0.28 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 4/59 (6%) Frame = -3 Query: 464 ATGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFT----DNDTLVTAGEDACVRVW 300 ATGS DT II+ VD +K G +G S+ D++ LV G D C +W Sbjct: 224 ATGSKDTTVIIWQVDPDTHLLKLLKTLE-GHAYGVSYIAWSPDDNYLVACGPDDCSELW 281
>PRP46_SCHPO (O13615) Pre-mRNA-splicing factor prp46 (Pre-mRNA-processing| protein 5) (Complexed with cdc5 protein 1) Length = 473 Score = 33.5 bits (75), Expect = 0.28 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Frame = -3 Query: 383 HLGGVHGXSFTDN-DTLVTAGEDACVRVWKLAAQQ*ARIL 267 HL GV+ D LVTAG DA RVW + +Q +L Sbjct: 246 HLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQNVHVL 285
>WDR26_MOUSE (Q8C6G8) WD-repeat protein 26| Length = 514 Score = 33.1 bits (74), Expect = 0.36 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 4/59 (6%) Frame = -3 Query: 464 ATGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFT----DNDTLVTAGEDACVRVW 300 ATGS DT II+ VD +K G +G S+ D+ LV G D C +W Sbjct: 224 ATGSKDTTVIIWQVDPDTHLLKLLKTLE-GHAYGVSYIAWSPDDSYLVACGPDDCSELW 281
>HAT2_USTMA (Q4P553) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)| Length = 485 Score = 33.1 bits (74), Expect = 0.36 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = -3 Query: 449 DTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFT--DNDTLVTAGEDACVRVWKL 294 D +I+D+ +PAS+ AH G V+ +F+ + + LVT D V VW L Sbjct: 313 DRQLLIWDIREPASAPKYRVEAHTGEVNALAFSPENENILVTGSSDKSVGVWDL 366
>WDR1_HUMAN (O75083) WD-repeat protein 1 (Actin-interacting protein 1) (AIP1)| (NORI-1) Length = 605 Score = 32.7 bits (73), Expect = 0.47 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Frame = -3 Query: 464 ATGSLDTCAIIYDVDKPASSRSTIKGAH-LGGVHGXSFTDNDTLVTAGEDACVRVWKL 294 A+G +D ++ + P +R I+ AH L V ++ D TLVT DA V+ W + Sbjct: 547 ASGGMDMMVYVWTLSDP-ETRVKIQDAHRLHHVSSLAWLDEHTLVTTSHDASVKEWTI 603
>YRG5_CAEEL (Q09406) Hypothetical WD-repeat protein K06A1.5| Length = 464 Score = 32.3 bits (72), Expect = 0.62 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = -3 Query: 383 HLGGVHGXSFTDNDTLVTAGEDACVRVWKLA 291 H G VH + +DT TAG D+ V++W+++ Sbjct: 174 HDGEVHDVEWMSDDTFATAGSDSKVQIWRVS 204
>YIRF_SCHPO (Q9P7I3) Hypothetical WD-repeat protein C664.15 in chromosome I| Length = 651 Score = 32.0 bits (71), Expect = 0.81 Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 19/76 (25%) Frame = -3 Query: 464 ATGSLDTCAIIYDVD-------------------KPASSRSTIKGAHLGGVHGXSFTDND 342 ATGS+DT ++++D +P + + + +H V + + +D Sbjct: 388 ATGSMDTTVRLWNLDNDVLHKDNPVEESLNSPPDQPVDNATNVLTSHTAPVTALALSSDD 447 Query: 341 TLVTAGEDACVRVWKL 294 L+T +D VR W + Sbjct: 448 VLITGADDKTVRQWDI 463
>WS17_SCHMA (Q26544) WD-repeat protein SL1-17| Length = 301 Score = 31.6 bits (70), Expect = 1.1 Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Frame = -3 Query: 464 ATGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSF-TDNDTLVTAGEDACVRVWKLAA 288 A+ S D ++DV ++ G H G V F +DN LVTA D VR+W LA+ Sbjct: 202 ASASDDKQIKVFDVRDGRLVIPSLNG-HKGWVVSVDFASDNRHLVTASTDCSVRIWDLAS 260 Query: 287 QQ 282 ++ Sbjct: 261 KE 262
>YNA6_YEAST (P41318) Hypothetical 34.0 kDa Trp-Asp repeats-containing protein| in SIS1-MRPL2 intergenic region Length = 303 Score = 31.6 bits (70), Expect = 1.1 Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Frame = -3 Query: 464 ATGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFT-DNDTLVTAGEDACVRVWKLAA 288 AT S D A ++ +D +T+ G H V +F+ D+ LVTA D VR+W L+ Sbjct: 223 ATCSADHTARVWSIDDDFKLETTLDG-HQRWVWDCAFSADSAYLVTASSDHYVRLWDLST 281 Query: 287 QQ*AR 273 ++ R Sbjct: 282 REIVR 286
>LIN23_CAEEL (Q09990) F-box/WD-repeat protein lin-23 (Abnormal cell lineage| protein 23) Length = 665 Score = 31.6 bits (70), Expect = 1.1 Identities = 18/63 (28%), Positives = 28/63 (44%) Frame = -3 Query: 422 DKPASSRSTIKGAHLGGVHGXSFTDNDTLVTAGEDACVRVWKLAAQQ*ARILVHQLAMAA 243 D+ S S I H G V + DN +++ DA VRVW + + + L+H Sbjct: 248 DRKDYSCSRILSGHTGSVLCLQY-DNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVL 306 Query: 242 YRR 234 + R Sbjct: 307 HLR 309
>WDR1_MOUSE (O88342) WD-repeat protein 1 (Actin-interacting protein 1) (AIP1)| Length = 605 Score = 31.6 bits (70), Expect = 1.1 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Frame = -3 Query: 464 ATGSLDTCAIIYDVDKPASSRSTIKGAH-LGGVHGXSFTDNDTLVTAGEDACVRVWKL 294 A+G +D ++ + P ++ I+ AH L V ++ D TLVT DA V+ W + Sbjct: 547 ASGGMDMMVYVWTLSDP-ETKVKIQDAHRLHHVSSLAWLDEHTLVTTSHDASVKEWTI 603
>PRP46_CANGA (Q6FJZ9) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing| protein 46) Length = 427 Score = 31.2 bits (69), Expect = 1.4 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = -3 Query: 455 SLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFTDN-DTLVTAGEDACVRVWKL 294 S D +D++K + R+ HL GVH D +VTAG D+ V+VW + Sbjct: 177 SEDKTVKCWDLEKNTAIRNY--HGHLSGVHTVDIHPTVDVVVTAGRDSVVKVWDI 229
>WD51A_MOUSE (Q8JZX3) WD-repeat protein 51A| Length = 405 Score = 31.2 bits (69), Expect = 1.4 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Frame = -3 Query: 464 ATGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSF-TDNDTLVTAGEDACVRVWKLAA 288 A+GS D I+ + ST+ AH V F +D +LVTA +D V+VW Sbjct: 77 ASGSRDKTVRIWVPN--VKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHR 134 Query: 287 QQ 282 Q+ Sbjct: 135 QR 136
>RIM_CAEEL (Q22366) Rab-3-interacting molecule unc-10 (Rim) (Uncoordinated| protein 10) Length = 1563 Score = 31.2 bits (69), Expect = 1.4 Identities = 11/24 (45%), Positives = 18/24 (75%) Frame = -2 Query: 435 HIRRRQAGIQPQHHQGSSPRRGPR 364 H +++ AG+QPQHHQG ++ P+ Sbjct: 1197 HQQQQTAGVQPQHHQGFQQQQHPQ 1220
>WDR3_HUMAN (Q9UNX4) WD-repeat protein 3| Length = 943 Score = 31.2 bits (69), Expect = 1.4 Identities = 21/67 (31%), Positives = 32/67 (47%) Frame = -3 Query: 464 ATGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFTDNDTLVTAGEDACVRVWKLAAQ 285 A+GS DT I++DV S +KG + + LVT+G+D V+ W L Q Sbjct: 123 ASGSKDTDIIVWDVINE-SGLYRLKGHKDAITQALFLREKNLLVTSGKDTMVKWWDLDTQ 181 Query: 284 Q*ARILV 264 + +V Sbjct: 182 HCFKTMV 188
>WD51B_MOUSE (Q8BHD1) WD-repeat protein 51B| Length = 476 Score = 30.8 bits (68), Expect = 1.8 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = -3 Query: 464 ATGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFT-DNDTLVTAGEDACVRVWKLAA 288 A+ S D ++ +D+ S S K AH V F+ D LVTA ED ++VW + Sbjct: 76 ASASRDRTVRLWVLDRKGKS-SEFK-AHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFR 133 Query: 287 QQ 282 Q+ Sbjct: 134 QR 135
>TAF5L_MOUSE (Q91WQ5) TAF5-like RNA polymerase II p300/CBP-associated| factor-associated factor 65 kDa subunit 5L (PCAF-associated factor 65 beta) (PAF65-beta) Length = 589 Score = 30.8 bits (68), Expect = 1.8 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Frame = -3 Query: 464 ATGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFTDNDT-LVTAGEDACVRVWKLAA 288 ATGS D ++ + S R + H G V SF+ N L +AGED +++W LA+ Sbjct: 442 ATGSTDKTVRLWSAQQGNSVR--LFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLAS 499
>CDT2_SCHPO (Q10990) Cell division cycle protein cdt2| Length = 490 Score = 30.8 bits (68), Expect = 1.8 Identities = 12/46 (26%), Positives = 22/46 (47%) Frame = -3 Query: 437 IIYDVDKPASSRSTIKGAHLGGVHGXSFTDNDTLVTAGEDACVRVW 300 +++D + SS + + G H V ++ L + +D VRVW Sbjct: 418 VVFDTTRNCSSSAMLTGGHTKDVTAVDWSSEGQLASISDDGSVRVW 463
>YO128_YEAST (Q08281) WD-repeat protein YOL138C| Length = 1341 Score = 30.8 bits (68), Expect = 1.8 Identities = 14/60 (23%), Positives = 34/60 (56%), Gaps = 5/60 (8%) Frame = -3 Query: 446 TCAIIYDVDKPASSRSTIKGA---HLGGVHGXSFT--DNDTLVTAGEDACVRVWKLAAQQ 282 T IYD++K +S + + + H ++ F +++ +++ G+D+CV++W L + + Sbjct: 233 TAISIYDLNKSSSIDNPLITSLCEHTRSINSFDFNMVESNLIISGGQDSCVKIWDLRSNK 292
>KTNB1_STRPU (O61585) Katanin p80 WD40-containing subunit B1 (Katanin p80| subunit B1) (p80 katanin) Length = 690 Score = 30.4 bits (67), Expect = 2.3 Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = -3 Query: 464 ATGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFT-DNDTLVTAGEDACVRVWKL 294 A+GS DT ++DV + T KG H V+ F+ D LVTA ED +++W L Sbjct: 117 ASGSTDTNVKLWDVRRKGCIY-TYKG-HSDQVNMIKFSPDGKWLVTASEDTTIKLWDL 172
>YK16_YEAST (P36130) Hypothetical 74.7 kDa Trp-Asp repeats-containing protein| in DAL80-GAP1 intergenic region Length = 659 Score = 30.4 bits (67), Expect = 2.3 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 2/76 (2%) Frame = -3 Query: 464 ATGSLDTCAIIYD--VDKPASSRSTIKGAHLGGVHGXSFTDNDTLVTAGEDACVRVWKLA 291 ATG+ D ++D V KP + H G+ F D++ LVT D VR+W L Sbjct: 519 ATGTKDGIVRLWDLRVGKPVR----LLEGHTDGITSLKF-DSEKLVTGSMDNSVRIWDLR 573 Query: 290 AQQ*ARILVHQLAMAA 243 ++ + L +++ Sbjct: 574 TSSILDVIAYDLPVSS 589
>PRP46_KLULA (Q6CKE8) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing| protein 46) Length = 434 Score = 30.4 bits (67), Expect = 2.3 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Frame = -3 Query: 383 HLGGVHGXSFTDN-DTLVTAGEDACVRVWKLAAQQ*ARIL 267 HL GVH + D + TAG DA VR+W + ++ +L Sbjct: 206 HLSGVHTVDVHPSLDIIATAGRDAVVRLWDIRSRSEIMVL 245
>AHI1_MOUSE (Q8K3E5) Jouberin (Abelson helper integration site 1 protein)| (AHI-1) Length = 1047 Score = 30.0 bits (66), Expect = 3.1 Identities = 13/30 (43%), Positives = 21/30 (70%) Frame = -3 Query: 344 DTLVTAGEDACVRVWKLAAQQ*ARILVHQL 255 + +VT D+ +R+WK+ A++ A ILV QL Sbjct: 561 ELVVTGCYDSMIRIWKIDAREDAAILVRQL 590
>TIPD_DICDI (O15736) Protein tipD| Length = 612 Score = 30.0 bits (66), Expect = 3.1 Identities = 13/38 (34%), Positives = 23/38 (60%) Frame = -3 Query: 407 SRSTIKGAHLGGVHGXSFTDNDTLVTAGEDACVRVWKL 294 SR T+ G H+G V+ F +++ +VT D +++W L Sbjct: 400 SRHTLTG-HIGKVYTGKFINSNRVVTGSHDRTIKLWDL 436
>TAF5_SCHPO (O13282) Transcription initiation factor TFIID subunit 5| (Transcription initiation factor TFIID 72 kDa subunit) (TAFII-72) Length = 643 Score = 30.0 bits (66), Expect = 3.1 Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%) Frame = -3 Query: 386 AHLGGVHGXSFT-DNDTLVTAGEDACVRVWKL 294 +H G V+G +F+ DN L++ EDA R+W + Sbjct: 377 SHSGPVYGTTFSPDNKYLLSCSEDASARLWSV 408 Score = 28.9 bits (63), Expect = 6.8 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Frame = -3 Query: 455 SLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFTDNDT-LVTAGEDACVRVW 300 S D+ +I+ D R H G ++ SF+ T LV+ G D VR W Sbjct: 522 SADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAW 574
>PRP46_EMENI (Q5BE22) Pre-mRNA-splicing factor prp46 (Pre-mRNA-processing| protein 46) Length = 452 Score = 30.0 bits (66), Expect = 3.1 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = -3 Query: 461 TGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFTDNDTLVTAGE-DACVRVWKLAAQ 285 TG D A ++D+ S + H G V + D V G DA VR+W LAA Sbjct: 244 TGGRDGVARVWDMR--TRSNIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLWDLAAG 301 Query: 284 Q*ARILVH 261 + +L H Sbjct: 302 KTMGVLTH 309
>L2DTL_DROME (Q24371) Protein lethal(2)denticleless (Protein DTL83)| Length = 769 Score = 30.0 bits (66), Expect = 3.1 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%) Frame = -3 Query: 389 GAHLGGVHGXSFTDNDTLVTAGE-DACVRVWKL 294 G + G +F DNDTL++ G D ++VW L Sbjct: 218 GTTSSSITGLAFQDNDTLISCGAGDGVIKVWDL 250
>PRP46_CRYNE (Q5KDR4) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing| protein 46) Length = 473 Score = 30.0 bits (66), Expect = 3.1 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%) Frame = -3 Query: 383 HLGGVHGXSFTDN-DTLVTAGEDACVRVWKL 294 H GV+ S D LVT G DA VRVW + Sbjct: 265 HFSGVYSLSVHPTLDVLVTGGRDASVRVWDM 295
>GBLP_DICDI (P46800) Guanine nucleotide-binding protein beta subunit-like| protein Length = 329 Score = 30.0 bits (66), Expect = 3.1 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Frame = -3 Query: 461 TGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFT-DNDTLVTAGEDACVRVW 300 +GS D ++D+ K S+R KG H V +F+ DN +++ DA ++VW Sbjct: 87 SGSWDNTLRLWDITKGVSTR-LFKG-HTQDVMSVAFSSDNRQIISGSRDATIKVW 139
>AHI1_RAT (Q6DTM3) Jouberin (Abelson helper integration site 1 protein| homolog) (AHI-1) Length = 1047 Score = 29.6 bits (65), Expect = 4.0 Identities = 13/30 (43%), Positives = 21/30 (70%) Frame = -3 Query: 344 DTLVTAGEDACVRVWKLAAQQ*ARILVHQL 255 + +VT D+ +R+WK+ A++ A ILV QL Sbjct: 562 ELVVTGCYDSMIRIWKVDAREDAAILVRQL 591
>TAF5L_HUMAN (O75529) TAF5-like RNA polymerase II p300/CBP-associated| factor-associated factor 65 kDa subunit 5L (PCAF-associated factor 65 beta) (PAF65-beta) Length = 589 Score = 29.6 bits (65), Expect = 4.0 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Frame = -3 Query: 464 ATGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFTDNDT-LVTAGEDACVRVWKLAA 288 ATGS D ++ + S R + H G V +F+ N L +AGED +++W LA+ Sbjct: 442 ATGSTDKTVRLWSAQQGNSVR--LFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLAS 499
>PRP46_ASPFU (Q4WT34) Pre-mRNA-splicing factor prp46 (Pre-mRNA-processing| protein 46) Length = 453 Score = 29.6 bits (65), Expect = 4.0 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Frame = -3 Query: 461 TGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFTDNDT-LVTAGEDACVRVWKLAAQ 285 TG D A ++D+ S + H G V + D ++T DA VR+W LAA Sbjct: 245 TGGRDGVARVWDMR--TRSNIHVLSGHKGTVADLKCQEADPQIITGSLDATVRLWDLAAG 302 Query: 284 Q*ARILVH 261 + +L H Sbjct: 303 KTMGVLTH 310
>WD51A_BOVIN (Q2TBP4) WD-repeat protein 51A| Length = 407 Score = 29.6 bits (65), Expect = 4.0 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Frame = -3 Query: 464 ATGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSF-TDNDTLVTAGEDACVRVWKLAA 288 A+GS D I+ + ST+ AH V F +D + VTA +D V+VW Sbjct: 77 ASGSRDKTVRIWVPN--VKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHR 134 Query: 287 QQ 282 Q+ Sbjct: 135 QK 136
>NLE1_BOVIN (Q58D20) Notchless homolog 1| Length = 485 Score = 29.6 bits (65), Expect = 4.0 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Frame = -3 Query: 461 TGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFT-DNDTLVTAGEDACVRVWK 297 +GS D+ ++DV A ST H V+ ++ D + + G+D C+R+W+ Sbjct: 431 SGSSDSTLKVWDVK--AQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWR 484
>GBLP_LEIMA (Q25306) Guanine nucleotide-binding protein beta subunit-like| protein (Antigen LACK) Length = 312 Score = 29.6 bits (65), Expect = 4.0 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Frame = -3 Query: 461 TGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFTDNDTL-VTAGEDACVRVWKLAAQ 285 T S D ++D+ R +K H V +F+ +D L V+AG D +RVW +A + Sbjct: 82 TASWDRSIRMWDLRNGQCQRKFLK--HTKDVLAVAFSPDDRLIVSAGRDNVIRVWNVAGE 139
>GBLP_LEIIN (P62884) Guanine nucleotide-binding protein beta subunit-like| protein (Antigen LACK) (LiP36) (p36Li) Length = 312 Score = 29.6 bits (65), Expect = 4.0 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Frame = -3 Query: 461 TGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFTDNDTL-VTAGEDACVRVWKLAAQ 285 T S D ++D+ R +K H V +F+ +D L V+AG D +RVW +A + Sbjct: 82 TASWDRSIRMWDLRNGQCQRKFLK--HTKDVLAVAFSPDDRLIVSAGRDNVIRVWNVAGE 139
>GBLP_LEICH (P62883) Guanine nucleotide-binding protein beta subunit-like| protein (Antigen LACK) Length = 312 Score = 29.6 bits (65), Expect = 4.0 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Frame = -3 Query: 461 TGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFTDNDTL-VTAGEDACVRVWKLAAQ 285 T S D ++D+ R +K H V +F+ +D L V+AG D +RVW +A + Sbjct: 82 TASWDRSIRMWDLRNGQCQRKFLK--HTKDVLAVAFSPDDRLIVSAGRDNVIRVWNVAGE 139
>WDR6_HUMAN (Q9NNW5) WD-repeat protein 6| Length = 1121 Score = 29.6 bits (65), Expect = 4.0 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%) Frame = -3 Query: 422 DKPASSRSTIKGAHLGGVHGXSFTDNDTLV-TAGEDACVRVWKL 294 +KP + I G H+G + S+ ++ L+ TA ED VR+WK+ Sbjct: 196 NKPVAPDRRISG-HVGIIFSMSYLESKGLLATASEDRSVRIWKV 238
>DIP2_YEAST (Q12220) DOM34-interacting protein 2 (U3 small nucleolar| RNA-associated protein 12) (U3 snoRNA-associated protein 12) Length = 943 Score = 29.6 bits (65), Expect = 4.0 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = -3 Query: 386 AHLGGVHGXSFTDNDTLVTAGEDACVRVWKL 294 AH G G + D D L+T G D+ V++WKL Sbjct: 202 AHTGECWGLAVKD-DLLITTGTDSQVKIWKL 231
>PRP46_CANAL (Q5A7Q3) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing| protein 46) Length = 389 Score = 29.3 bits (64), Expect = 5.2 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = -3 Query: 383 HLGGVHGXSF-TDNDTLVTAGEDACVRVWKLAAQQ*ARILV 264 HLGGV+ + D L + G+D VRVW + ++ A L+ Sbjct: 174 HLGGVYSIGLHPELDVLFSGGKDCVVRVWDIRSRVEAMTLL 214
>POF11_SCHPO (Q09855) F-box/WD-repeat protein pof11| Length = 506 Score = 29.3 bits (64), Expect = 5.2 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 4/70 (5%) Frame = -3 Query: 428 DVDKPASSRSTIKGAHLGGVHGXSFTDNDTL-VTAGEDACVRVWKLAAQQ*ARIL-VHQ- 258 D PA + + HL V+ ++ L VTA D +R W + RI+ HQ Sbjct: 331 DATSPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQR 390 Query: 257 -LAMAAYRRK 231 +A A Y K Sbjct: 391 GIACAQYNGK 400
>YTM1_YEAST (Q12024) Microtubule-associated protein YTM1| Length = 460 Score = 29.3 bits (64), Expect = 5.2 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = -3 Query: 383 HLGGVHGXSFTDNDTLVTAGEDACVRVWK 297 H G + + N LV+AG D +R+WK Sbjct: 143 HSGPIRAVKYISNTRLVSAGNDRTLRLWK 171
>PRP46_DEBHA (Q6BU94) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing| protein 46) Length = 417 Score = 29.3 bits (64), Expect = 5.2 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%) Frame = -3 Query: 383 HLGGVHGXSF-TDNDTLVTAGEDACVRVWKLAAQ 285 H+GG++ + + D L T G D+ +RVW L ++ Sbjct: 210 HVGGIYAMALHPELDLLFTGGRDSVIRVWDLRSR 243
>WD51A_HUMAN (Q8NBT0) WD-repeat protein 51A| Length = 407 Score = 29.3 bits (64), Expect = 5.2 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Frame = -3 Query: 464 ATGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSF-TDNDTLVTAGEDACVRVWKLAA 288 A+GS D I+ + ST+ AH V F +D + VTA +D V+VW Sbjct: 77 ASGSRDKTVRIWVPN--VKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHR 134 Query: 287 QQ 282 Q+ Sbjct: 135 QK 136
>GBLP_CAEEL (Q21215) Guanine nucleotide-binding protein beta subunit 2-like 1| Length = 324 Score = 29.3 bits (64), Expect = 5.2 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Frame = -3 Query: 461 TGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFT-DNDTLVTAGEDACVRVWKLAAQ 285 +GS D ++D+++ S+R I +H V +F+ DN +V+ D +++W AQ Sbjct: 85 SGSWDKTLRLWDLNQGVSTRQFI--SHTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLAQ 142
>HIRA_DROME (O17468) HIRA protein homolog (dHIRA)| Length = 1047 Score = 28.9 bits (63), Expect = 6.8 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Frame = -3 Query: 464 ATGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFTD-NDTLVTAGEDACVRVW 300 A+ S+D II+D S +T+KG H G V G S+ L + +D +++W Sbjct: 145 ASCSIDNTVIIWDAQAFPHSVATLKG-HTGLVKGVSWDPLGRFLASQSDDRSIKIW 199
>PK1IP_HUMAN (Q9NWT1) p21-activated protein kinase-interacting protein 1| (PAK1-interacting protein 1) (PAK/PLC-interacting protein 1) (hPIP1) Length = 392 Score = 28.9 bits (63), Expect = 6.8 Identities = 16/54 (29%), Positives = 24/54 (44%) Frame = -3 Query: 461 TGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFTDNDTLVTAGEDACVRVW 300 TGS D IYD+ K + + H G + F N L++ ED + +W Sbjct: 57 TGSKDETIHIYDMKKKIEHGALVH--HSGTITCLKFYGNRHLISGAEDGLICIW 108
>PKWA_THECU (P49695) Probable serine/threonine-protein kinase pkwA (EC| 2.7.11.1) Length = 742 Score = 28.9 bits (63), Expect = 6.8 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Frame = -3 Query: 464 ATGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFTDNDTLVTAG-EDACVRVWKLAA 288 A GS D ++DV T++G H V +F+ + L+ +G +DA VR+W +AA Sbjct: 475 AGGSGDKLIHVWDVAS-GDELHTLEG-HTDWVRAVAFSPDGALLASGSDDATVRLWDVAA 532 Query: 287 QQ 282 + Sbjct: 533 AE 534
>APAF_RAT (Q9EPV5) Apoptotic protease-activating factor 1 (Apaf-1)| Length = 1249 Score = 28.9 bits (63), Expect = 6.8 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Frame = -3 Query: 383 HLGGVHGXSFT-DNDTLVTAGEDACVRVWKLAAQQ*ARILVHQLAMAAYR 237 H V FT D TL+++ ED+ ++VW ++ + HQ + +R Sbjct: 1002 HKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTEEYVFLQAHQETVKDFR 1051
>YRIQ_CAEEL (P90794) Hypothetical WD-repeat protein D2030.9| Length = 571 Score = 28.9 bits (63), Expect = 6.8 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%) Frame = -3 Query: 434 IYDVDKPASSRSTIKGAHLGGVHGXSFTD--NDTLVTAGEDACVRVW 300 ++DV++ R TI AH V+ F D ++ + +AG+D V+VW Sbjct: 294 VFDVEQRRRIR-TIVNAHEDDVNSVCFADLGSNLIYSAGDDGLVKVW 339
>YH92_CAEEL (Q23256) Hypothetical WD-repeat protein ZC302.2| Length = 501 Score = 28.9 bits (63), Expect = 6.8 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Frame = -3 Query: 386 AHLGGVHGXSFT-DNDTLVTAGEDACVRVWKLAAQQ*ARILV 264 AH + S+ D +T+ T+ D C+RVW A+ + LV Sbjct: 337 AHSDPITSISYNHDGNTMATSSYDGCIRVWDAASGSCLKTLV 378
>YJL2_YEAST (P47025) Hypothetical 80.0 kDa Trp-Asp repeats-containing protein| in ASF1-CCT7 intergenic region Length = 714 Score = 28.5 bits (62), Expect = 8.9 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Frame = -3 Query: 458 GSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFT-DNDTLVTAGEDACVRVWKLAAQQ 282 G LD I+D+ K ++ HL ++ D TLVT G DA +++W L Q Sbjct: 417 GYLDHTVKIWDLSK--QNKIGELAGHLATINCMQINRDYGTLVTGGRDAALKLWNLNLAQ 474
>NLE1_MOUSE (Q8VEJ4) Notchless homolog 1| Length = 484 Score = 28.5 bits (62), Expect = 8.9 Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Frame = -3 Query: 461 TGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFT-DNDTLVTAGEDACVRVWK 297 +GS D+ ++DV A +T H V+ ++ D + + G+D C+R+W+ Sbjct: 430 SGSSDSTLKVWDVK--AQKLATDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWR 483
>Y163_SYNY3 (Q55563) Hypothetical WD-repeat protein sll0163| Length = 1693 Score = 28.5 bits (62), Expect = 8.9 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Frame = -3 Query: 461 TGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFT-DNDTLVTAGEDACVRVW 300 TGS D A +++V + T+ H V F+ D+ +VTA +D RVW Sbjct: 1400 TGSADKTAQLWNV---LGKKLTVLRGHQDAVLNVRFSPDSQYIVTASKDGTARVW 1451
>WDHD1_HUMAN (O75717) WD repeat and HMG-box DNA-binding protein 1 (Acidic| nucleoplasmic DNA-binding protein 1) (And-1) Length = 1129 Score = 28.5 bits (62), Expect = 8.9 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Frame = -3 Query: 464 ATGSLDTCAIIYDVDKPASSRSTIKGAHLGGVHGXSFTDNDT-LVTAGEDACVRVWKLAA 288 A GS D I DV +S + T +G H V SF D L +A D VRVW+++ Sbjct: 110 AAGSSDFLVKIVDV-MDSSQQKTFRG-HDAPVLSLSFDPKDIFLASASCDGSVRVWQISD 167 Query: 287 Q 285 Q Sbjct: 168 Q 168
>DAPB_RICTY (Q68XM0) Dihydrodipicolinate reductase (EC 1.3.1.26) (DHPR)| Length = 239 Score = 28.5 bits (62), Expect = 8.9 Identities = 10/29 (34%), Positives = 19/29 (65%) Frame = -3 Query: 401 STIKGAHLGGVHGXSFTDNDTLVTAGEDA 315 S+++G ++ G+H F DND ++T +A Sbjct: 178 SSLRGGNVHGIHEIFFLDNDEIITLKHEA 206
>RGA_ARATH (Q9SLH3) DELLA protein RGA (Repressor on the ga1-3 mutant)| (GAI-related sequence) (Restoration of growth on ammonia protein 1) Length = 587 Score = 28.5 bits (62), Expect = 8.9 Identities = 18/53 (33%), Positives = 25/53 (47%) Frame = -3 Query: 401 STIKGAHLGGVHGXSFTDNDTLVTAGEDACVRVWKLAAQQ*ARILVHQLAMAA 243 ST G +GGV G + T T TA ++ V + +Q+ LVH L A Sbjct: 177 STSTGTQIGGVIGTTVTTTTTTTTAAGESTRSVILVDSQENGVRLVHALMACA 229 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,702,776 Number of Sequences: 219361 Number of extensions: 811857 Number of successful extensions: 2506 Number of sequences better than 10.0: 72 Number of HSP's better than 10.0 without gapping: 2330 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2502 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
