ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal2a14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_469455.1| Oryza sativa (japonica cultivar-group), mRNA 438 e-119
2dbj|AK065804.1| Oryza sativa (japonica cultivar-group) cDNA clon... 438 e-119
3gb|AC091775.10| Oryza sativa chromosome 3 BAC OSJNBa0004G17 geno... 256 9e-65
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 256 9e-65
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 256 9e-65
6gb|AF466646.1| Zea mays putative transposase (Z195D10.1) gene, p... 228 2e-56
7ref|NM_128656.2| Arabidopsis thaliana oxysterol binding AT2G3102... 74 7e-10
8gb|AC004669.3| Arabidopsis thaliana chromosome 2 clone F7F1 map ... 74 7e-10
9ref|NM_179012.2| Arabidopsis thaliana oxysterol binding AT4G0818... 48 0.040
10ref|NM_202789.1| Arabidopsis thaliana oxysterol binding AT4G0818... 48 0.040
11ref|NM_116887.2| Arabidopsis thaliana oxysterol binding AT4G0818... 48 0.040
12gb|AY139750.1| Arabidopsis thaliana AT4g08180/T12G13_20 mRNA, co... 48 0.040
13dbj|AK221773.1| Arabidopsis thaliana mRNA for hypothetical prote... 48 0.040
14emb|BX826314.1|CNS0A4MX Arabidopsis thaliana Full-length cDNA Co... 48 0.040
15gb|AC009660.15| Homo sapiens chromosome 15, clone RP11-424J10, c... 46 0.16
16gb|AC166653.5| Mus musculus BAC clone RP24-84J23 from chromosome... 44 0.62
17gb|AC166822.3| Mus musculus BAC clone RP24-117F20 from chromosom... 44 0.62
18gb|BC074646.1| Xenopus tropicalis serine/arginine repetitive mat... 44 0.62
19ref|NM_001005645.1| Xenopus tropicalis serine/arginine repetitiv... 44 0.62
20gb|AC158165.1| Mus musculus BAC clone RP23-462M21 from chromosom... 44 0.62
21gb|AC101931.8| Mus musculus chromosome 1, clone RP24-63O23, comp... 44 0.62
22gb|AC121298.10| Mus musculus chromosome 5, clone RP23-377E6, com... 42 2.4
23gb|AC151759.1| Ornithorhynchus anatinus chromosome UNK clone OAB... 42 2.4
24gb|AC168268.2| Mus musculus BAC clone RP23-339K12 from chromosom... 42 2.4
25gb|AC160993.5| Mus musculus BAC clone RP23-159D11 from chromosom... 42 2.4
26gb|AC151667.1| Pan troglodytes chromosome X clone RP43-007H19 ma... 42 2.4
27gb|AC120413.20| Mus musculus chromosome 5, clone RP24-458L16, co... 42 2.4
28gb|AC145689.4| Pan troglodytes BAC clone CH251-184I22 from X, co... 42 2.4
29emb|CR388131.10| Zebrafish DNA sequence from clone DKEY-114G9 in... 42 2.4
30gb|AC125313.2| Mus musculus BAC clone RP24-353A16 from 5, comple... 42 2.4
31gb|AC125343.2| Mus musculus BAC clone RP24-537A5 from 5, complet... 42 2.4
32gb|AC155955.2| Xenopus tropicalis clone CH216-151P9, complete se... 42 2.4
33gb|AC148217.15| Medicago truncatula clone mth2-20c19, complete s... 42 2.4
34gb|AC087871.9| Genomic sequence for Mus musculus, clone RP23-334... 42 2.4
35gb|AC007846.12| Homo sapiens chromosome 17, clone CTC-803F22, co... 42 2.4
36gb|AC154497.2| Mus musculus BAC clone RP24-112C15 from chromosom... 42 2.4
37gb|AC068718.6| Homo sapiens BAC clone RP11-123G24 from 2, comple... 42 2.4
38gb|U82671.5| Homo sapiens chromosome X multiple clones map q28, ... 42 2.4
39gb|AC117622.10| Mus musculus chromosome 5, clone RP23-114L5, com... 42 2.4
40emb|AL928988.14| Mouse DNA sequence from clone RP23-402M7 on chr... 42 2.4
41emb|BX005220.7| Zebrafish DNA sequence from clone DKEY-82D4 in l... 42 2.4
42gb|BC072570.1| Mus musculus cDNA clone IMAGE:5719559 42 2.4
43emb|CT010467.6| Mouse DNA sequence from clone RP23-81C12 on chro... 42 2.4
44gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome... 40 9.6
45gb|AC150653.5| Bos taurus BAC CH240-226L9 (Children's Hospital ... 40 9.6
46gb|AC150694.2| Bos taurus BAC CH240-144A17 (Children's Hospital... 40 9.6
47gb|AC090900.3| Drosophila melanogaster clone BACR30C07, complete... 40 9.6
48gb|AC127361.4| Mus musculus BAC clone RP23-125M8 from chromosome... 40 9.6
49gb|AC154605.2| Mus musculus BAC clone RP23-348G3 from chromosome... 40 9.6
50emb|CR956370.6| Pig DNA sequence from clone CH242-181F19 on chro... 40 9.6
51gb|BC056062.1| Xenopus laevis chronic myelogenous leukemia tumor... 40 9.6
52gb|AC091302.5| Oryza sativa chromosome 3 BAC OSJNBb0015I21 genom... 40 9.6
53gb|AC146588.14| Medicago truncatula clone mth2-145c3, complete s... 40 9.6
54emb|AL583806.7| Human DNA sequence from clone RP11-10F17 on chro... 40 9.6
55emb|AL356296.12| Human DNA sequence from clone RP11-340B1 on chr... 40 9.6
56emb|AL160004.18| Human DNA sequence from clone RP5-1068B5 on chr... 40 9.6
57gb|AC164578.5| Mus musculus BAC RP23-15E20 (Roswell Park Cancer... 40 9.6
58emb|AL161571.2|ATCHRIV67 Arabidopsis thaliana DNA chromosome 4, ... 40 9.6
59emb|AL161510.2|ATCHRIV22 Arabidopsis thaliana DNA chromosome 4, ... 40 9.6
60emb|AL080252.2|ATT12G13 Arabidopsis thaliana DNA chromosome 4, B... 40 9.6
61emb|AL035602.1|ATT29A15 Arabidopsis thaliana DNA chromosome 4, B... 40 9.6
62gb|AC101690.7| Mus musculus chromosome 7, clone RP23-218E6, comp... 40 9.6
63gb|AC009930.7| Homo sapiens chromosome 8, clone RP11-114O8, comp... 40 9.6
64gb|AC084823.11| Mus Musculus Strain C57BL6/J chromosome 8 BAC, R... 40 9.6
65gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 gen... 40 9.6
66gb|AC023577.6| Homo sapiens chromosome 18, clone RP11-645D5, com... 40 9.6
67dbj|AK163197.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 40 9.6
68emb|CR338865.2| Gallus gallus finished cDNA, clone ChEST1020f23 40 9.6
69dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
70dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
71gb|AF288779.1|AF288779 Homo sapiens skeletal actin gene, promote... 40 9.6
72gb|AC100735.15| Mus musculus chromosome 7, clone RP24-331F7, com... 40 9.6
73gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B... 40 9.6
74gb|AC104946.4| Homo sapiens chromosome 8, clone RP11-946L20, com... 40 9.6
75dbj|AP004131.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
76gb|AE003812.4| Drosophila melanogaster chromosome 2R, section 38... 40 9.6
77gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 9.6
78gb|AC159275.6| Mus musculus BAC clone RP23-367C13 from chromosom... 40 9.6
79gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 9.6
80gb|AC004306.1|AC004306 Drosophila melanogaster DNA sequence (P1 ... 40 9.6
81gb|M79353.1|HIVENVMA7 Human immunodeficiency virus type 1 (clone... 40 9.6
82emb|AL603837.8| Mouse DNA sequence from clone RP23-254F2 on chro... 40 9.6
83gb|AC164983.2| Mus musculus BAC clone RP23-16J24 from chromosome... 40 9.6
84emb|AL731811.24| Mouse DNA sequence from clone RP23-60A1 on chro... 40 9.6 
>ref|XM_469455.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2735

 Score =  438 bits (221), Expect = e-119
 Identities = 320/352 (90%), Gaps = 1/352 (0%)
 Strand = Plus / Minus

                                                                        
Query: 351  cagagaaccagaagacctgtaacctacttgaa-cctagtcagttatcattagatcgtttg 409
            ||||||||||||||||||||||||||||  || |||||||||||||||| | |||||| |
Sbjct: 2467 cagagaaccagaagacctgtaacctactcaaagcctagtcagttatcatcaaatcgttag 2408

                                                                        
Query: 410  gaagttgtccgaaaatgtcagggcagccttcccagctgctcttttctctggattcccagt 469
            ||| ||||||||| || || || |||||||||||||||| ||||||||||||||||||||
Sbjct: 2407 gaacttgtccgaagatatctggacagccttcccagctgcccttttctctggattcccagt 2348

                                                                        
Query: 470  aaccaccgaggtagcggtatgtgtcgctacctttatccttcgcaaaccaccgaggtttcc 529
            ||||||| |||||||||||||||||| || ||||||| || |||||||||||||||||||
Sbjct: 2347 aaccaccaaggtagcggtatgtgtcggtagctttatcttttgcaaaccaccgaggtttcc 2288

                                                                        
Query: 530  acccactctcctgcatctttcgtgcctgccgttgtctttgctcaagcctcaacttctcag 589
            |||| |||||||||||||| |||||||| |||||||| || |||||||||||||||||||
Sbjct: 2287 acccgctctcctgcatcttccgtgcctgtcgttgtctctgttcaagcctcaacttctcag 2228

                                                                        
Query: 590  catttgctctttcatattcaccattctctaggcacctctggtccggtcgcaatcttgagt 649
            |||||||||||||||| ||||||||||||||||| | ||| || ||||||||||| ||||
Sbjct: 2227 catttgctctttcatactcaccattctctaggcatcgctgatctggtcgcaatctagagt 2168

                                                                
Query: 650  ctgtgggtggcagtttttccttcaatccangggtaagctcatttaatgtgat 701
            |||| ||||||||||||||||||||||||  |||||| ||||||||||||||
Sbjct: 2167 ctgttggtggcagtttttccttcaatccagcggtaagttcatttaatgtgat 2116



 Score = 44.1 bits (22), Expect = 0.62
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 294  tttaattgctctagtataaaccactaaaaa 323
            ||||||||||||| |||||||| |||||||
Sbjct: 2533 tttaattgctctaatataaaccgctaaaaa 2504
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>dbj|AK065804.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013037L05, full
            insert sequence
          Length = 2353

 Score =  438 bits (221), Expect = e-119
 Identities = 320/352 (90%), Gaps = 1/352 (0%)
 Strand = Plus / Minus

                                                                        
Query: 351  cagagaaccagaagacctgtaacctacttgaa-cctagtcagttatcattagatcgtttg 409
            ||||||||||||||||||||||||||||  || |||||||||||||||| | |||||| |
Sbjct: 2085 cagagaaccagaagacctgtaacctactcaaagcctagtcagttatcatcaaatcgttag 2026

                                                                        
Query: 410  gaagttgtccgaaaatgtcagggcagccttcccagctgctcttttctctggattcccagt 469
            ||| ||||||||| || || || |||||||||||||||| ||||||||||||||||||||
Sbjct: 2025 gaacttgtccgaagatatctggacagccttcccagctgcccttttctctggattcccagt 1966

                                                                        
Query: 470  aaccaccgaggtagcggtatgtgtcgctacctttatccttcgcaaaccaccgaggtttcc 529
            ||||||| |||||||||||||||||| || ||||||| || |||||||||||||||||||
Sbjct: 1965 aaccaccaaggtagcggtatgtgtcggtagctttatcttttgcaaaccaccgaggtttcc 1906

                                                                        
Query: 530  acccactctcctgcatctttcgtgcctgccgttgtctttgctcaagcctcaacttctcag 589
            |||| |||||||||||||| |||||||| |||||||| || |||||||||||||||||||
Sbjct: 1905 acccgctctcctgcatcttccgtgcctgtcgttgtctctgttcaagcctcaacttctcag 1846

                                                                        
Query: 590  catttgctctttcatattcaccattctctaggcacctctggtccggtcgcaatcttgagt 649
            |||||||||||||||| ||||||||||||||||| | ||| || ||||||||||| ||||
Sbjct: 1845 catttgctctttcatactcaccattctctaggcatcgctgatctggtcgcaatctagagt 1786

                                                                
Query: 650  ctgtgggtggcagtttttccttcaatccangggtaagctcatttaatgtgat 701
            |||| ||||||||||||||||||||||||  |||||| ||||||||||||||
Sbjct: 1785 ctgttggtggcagtttttccttcaatccagcggtaagttcatttaatgtgat 1734
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>gb|AC091775.10| Oryza sativa chromosome 3 BAC OSJNBa0004G17 genomic sequence, complete
              sequence
          Length = 139074

 Score =  256 bits (129), Expect = 9e-65
 Identities = 190/209 (90%), Gaps = 1/209 (0%)
 Strand = Plus / Plus

                                                                          
Query: 351    cagagaaccagaagacctgtaacctacttgaa-cctagtcagttatcattagatcgtttg 409
              ||||||||||||||||||||||||||||  || |||||||||||||||| | |||||| |
Sbjct: 109136 cagagaaccagaagacctgtaacctactcaaagcctagtcagttatcatcaaatcgttag 109195

                                                                          
Query: 410    gaagttgtccgaaaatgtcagggcagccttcccagctgctcttttctctggattcccagt 469
              ||| ||||||||| || || || |||||||||||||||| ||||||||||||||||||||
Sbjct: 109196 gaacttgtccgaagatatctggacagccttcccagctgcccttttctctggattcccagt 109255

                                                                          
Query: 470    aaccaccgaggtagcggtatgtgtcgctacctttatccttcgcaaaccaccgaggtttcc 529
              ||||||| |||||||||||||||||| || ||||||| || |||||||||||||||||||
Sbjct: 109256 aaccaccaaggtagcggtatgtgtcggtagctttatcttttgcaaaccaccgaggtttcc 109315

                                           
Query: 530    acccactctcctgcatctttcgtgcctgc 558
              |||| |||||||||||||| |||||||||
Sbjct: 109316 acccgctctcctgcatcttccgtgcctgc 109344



 Score =  153 bits (77), Expect = 9e-34
 Identities = 107/117 (91%)
 Strand = Plus / Plus

                                                                          
Query: 554    cctgccgttgtctttgctcaagcctcaacttctcagcatttgctctttcatattcaccat 613
              |||| |||||||| || ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 109871 cctgtcgttgtctctgttcaagcctcaacttctcagcatttgctctttcatactcaccat 109930

                                                                       
Query: 614    tctctaggcacctctggtccggtcgcaatcttgagtctgtgggtggcagtttttcct 670
              |||||||||| | ||| || ||||||||||| |||||||| ||||||||||||||||
Sbjct: 109931 tctctaggcatcgctgatctggtcgcaatctagagtctgttggtggcagtttttcct 109987



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 668    ccttcaatccangggtaagctcatttaatgtgat 701
              |||||||||||  |||||| ||||||||||||||
Sbjct: 110058 ccttcaatccagcggtaagttcatttaatgtgat 110091



 Score = 44.1 bits (22), Expect = 0.62
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 294    tttaattgctctagtataaaccactaaaaa 323
              ||||||||||||| |||||||| |||||||
Sbjct: 109070 tttaattgctctaatataaaccgctaaaaa 109099
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  256 bits (129), Expect = 9e-65
 Identities = 190/209 (90%), Gaps = 1/209 (0%)
 Strand = Plus / Minus

                                                                            
Query: 351      cagagaaccagaagacctgtaacctacttgaa-cctagtcagttatcattagatcgtttg 409
                ||||||||||||||||||||||||||||  || |||||||||||||||| | |||||| |
Sbjct: 28043971 cagagaaccagaagacctgtaacctactcaaagcctagtcagttatcatcaaatcgttag 28043912

                                                                            
Query: 410      gaagttgtccgaaaatgtcagggcagccttcccagctgctcttttctctggattcccagt 469
                ||| ||||||||| || || || |||||||||||||||| ||||||||||||||||||||
Sbjct: 28043911 gaacttgtccgaagatatctggacagccttcccagctgcccttttctctggattcccagt 28043852

                                                                            
Query: 470      aaccaccgaggtagcggtatgtgtcgctacctttatccttcgcaaaccaccgaggtttcc 529
                ||||||| |||||||||||||||||| || ||||||| || |||||||||||||||||||
Sbjct: 28043851 aaccaccaaggtagcggtatgtgtcggtagctttatcttttgcaaaccaccgaggtttcc 28043792

                                             
Query: 530      acccactctcctgcatctttcgtgcctgc 558
                |||| |||||||||||||| |||||||||
Sbjct: 28043791 acccgctctcctgcatcttccgtgcctgc 28043763



 Score =  153 bits (77), Expect = 9e-34
 Identities = 107/117 (91%)
 Strand = Plus / Minus

                                                                            
Query: 554      cctgccgttgtctttgctcaagcctcaacttctcagcatttgctctttcatattcaccat 613
                |||| |||||||| || ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 28043236 cctgtcgttgtctctgttcaagcctcaacttctcagcatttgctctttcatactcaccat 28043177

                                                                         
Query: 614      tctctaggcacctctggtccggtcgcaatcttgagtctgtgggtggcagtttttcct 670
                |||||||||| | ||| || ||||||||||| |||||||| ||||||||||||||||
Sbjct: 28043176 tctctaggcatcgctgatctggtcgcaatctagagtctgttggtggcagtttttcct 28043120



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                  
Query: 668      ccttcaatccangggtaagctcatttaatgtgat 701
                |||||||||||  |||||| ||||||||||||||
Sbjct: 28043049 ccttcaatccagcggtaagttcatttaatgtgat 28043016



 Score = 44.1 bits (22), Expect = 0.62
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 294      tttaattgctctagtataaaccactaaaaa 323
                ||||||||||||| |||||||| |||||||
Sbjct: 28044037 tttaattgctctaatataaaccgctaaaaa 28044008



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 235      atgtacggaaaaacaatgta 254
                ||||||||||||||||||||
Sbjct: 20494425 atgtacggaaaaacaatgta 20494444
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  256 bits (129), Expect = 9e-65
 Identities = 190/209 (90%), Gaps = 1/209 (0%)
 Strand = Plus / Minus

                                                                            
Query: 351      cagagaaccagaagacctgtaacctacttgaa-cctagtcagttatcattagatcgtttg 409
                ||||||||||||||||||||||||||||  || |||||||||||||||| | |||||| |
Sbjct: 28135295 cagagaaccagaagacctgtaacctactcaaagcctagtcagttatcatcaaatcgttag 28135236

                                                                            
Query: 410      gaagttgtccgaaaatgtcagggcagccttcccagctgctcttttctctggattcccagt 469
                ||| ||||||||| || || || |||||||||||||||| ||||||||||||||||||||
Sbjct: 28135235 gaacttgtccgaagatatctggacagccttcccagctgcccttttctctggattcccagt 28135176

                                                                            
Query: 470      aaccaccgaggtagcggtatgtgtcgctacctttatccttcgcaaaccaccgaggtttcc 529
                ||||||| |||||||||||||||||| || ||||||| || |||||||||||||||||||
Sbjct: 28135175 aaccaccaaggtagcggtatgtgtcggtagctttatcttttgcaaaccaccgaggtttcc 28135116

                                             
Query: 530      acccactctcctgcatctttcgtgcctgc 558
                |||| |||||||||||||| |||||||||
Sbjct: 28135115 acccgctctcctgcatcttccgtgcctgc 28135087



 Score =  153 bits (77), Expect = 9e-34
 Identities = 107/117 (91%)
 Strand = Plus / Minus

                                                                            
Query: 554      cctgccgttgtctttgctcaagcctcaacttctcagcatttgctctttcatattcaccat 613
                |||| |||||||| || ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 28134560 cctgtcgttgtctctgttcaagcctcaacttctcagcatttgctctttcatactcaccat 28134501

                                                                         
Query: 614      tctctaggcacctctggtccggtcgcaatcttgagtctgtgggtggcagtttttcct 670
                |||||||||| | ||| || ||||||||||| |||||||| ||||||||||||||||
Sbjct: 28134500 tctctaggcatcgctgatctggtcgcaatctagagtctgttggtggcagtttttcct 28134444



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                  
Query: 668      ccttcaatccangggtaagctcatttaatgtgat 701
                |||||||||||  |||||| ||||||||||||||
Sbjct: 28134373 ccttcaatccagcggtaagttcatttaatgtgat 28134340



 Score = 44.1 bits (22), Expect = 0.62
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 294      tttaattgctctagtataaaccactaaaaa 323
                ||||||||||||| |||||||| |||||||
Sbjct: 28135361 tttaattgctctaatataaaccgctaaaaa 28135332



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 235      atgtacggaaaaacaatgta 254
                ||||||||||||||||||||
Sbjct: 20487454 atgtacggaaaaacaatgta 20487473
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>gb|AF466646.1| Zea mays putative transposase (Z195D10.1) gene, partial cds;
             glycyl-tRNA synthetase (Z195D10.2), ornithine
             carbamoyltransferase (Z195D10.3), putative gag protein
             (Z195D10.5), putative SET-domain transcriptional regulator
             (Z195D10.7), putative oxysterol-binding protein
             (Z195D10.8), putative polyprotein (Z195D10.9), putative
             oxysterol-binding protein (Z195D10.10), putative gag-pol
             polyprotein (Z195D10.11), putative
             phosphatidylinositol-4-phosphate-5-kinase (Z195D10.12),
             hypothetical protein (Z195D10.15), putative gag-pol
             polyprotein (Z195D10.16), putative polyprotein
             (Z195D10.17), putative retrotransposon protein
             (Z195D10.18), and prpol (Z195D10.19) genes, complete cds;
             and putative teosinte branched2 (Z195D10.20) gene, partial
             cds
          Length = 141939

 Score =  228 bits (115), Expect = 2e-56
 Identities = 184/207 (88%)
 Strand = Plus / Minus

                                                                         
Query: 352   agagaaccagaagacctgtaacctacttgaacctagtcagttatcattagatcgtttgga 411
             ||||||||| ||||||| |||||||||  ||||||||||| |||||| |||||||| || 
Sbjct: 63865 agagaaccaaaagacctataacctactcaaacctagtcagctatcatcagatcgttaggg 63806

                                                                         
Query: 412   agttgtccgaaaatgtcagggcagccttcccagctgctcttttctctggattcccagtaa 471
               ||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 63805 tcttgcccgaagatgtcggggcagccttcccagctgctcttttctctggattcccagtac 63746

                                                                         
Query: 472   ccaccgaggtagcggtatgtgtcgctacctttatccttcgcaaaccaccgaggtttccac 531
             ||||||||||| |||||||||||  || |||||||||| |||||||||||||| ||||| 
Sbjct: 63745 ccaccgaggtaacggtatgtgtcagtagctttatcctttgcaaaccaccgaggcttccat 63686

                                        
Query: 532   ccactctcctgcatctttcgtgcctgc 558
             || || |||||||||||||||||||||
Sbjct: 63685 ccgctatcctgcatctttcgtgcctgc 63659



 Score =  129 bits (65), Expect = 1e-26
 Identities = 104/117 (88%)
 Strand = Plus / Minus

                                                                         
Query: 554   cctgccgttgtctttgctcaagcctcaacttctcagcatttgctctttcatattcaccat 613
             ||||||| ||| | || |||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 60938 cctgccgctgtttctgttcaagcctcaacttctcagcatttgccctttcatattcacctt 60879

                                                                      
Query: 614   tctctaggcacctctggtccggtcgcaatcttgagtctgtgggtggcagtttttcct 670
             |||| || || |||||||| ||||| |||||||||||||| ||||||| ||||||||
Sbjct: 60878 tctccagacatctctggtctggtcgtaatcttgagtctgttggtggcaatttttcct 60822
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>ref|NM_128656.2| Arabidopsis thaliana oxysterol binding AT2G31020 mRNA, complete cds
          Length = 2422

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 144/180 (80%)
 Strand = Plus / Minus

                                                                        
Query: 523  ggtttccacccactctcctgcatctttcgtgcctgccgttgtctttgctcaagcctcaac 582
            |||||||| || ||||| ||||||| ||  ||||| | ||||||||| || | |||||||
Sbjct: 2153 ggtttccaacctctctcttgcatctctctcgcctgtctttgtctttgttccaacctcaac 2094

                                                                        
Query: 583  ttctcagcatttgctctttcatattcaccattctctaggcacctctggtccggtcgcaat 642
            ||||| || ||| |  ||||||| || || |||||||   |||||||||||||||  | |
Sbjct: 2093 ttctctgcgtttcccatttcatactctcccttctctaaatacctctggtccggtctaagt 2034

                                                                        
Query: 643  cttgagtctgtgggtggcagtttttccttcaatccangggtaagctcatttaatgtgatc 702
            ||||| ||||| |||||||  || ||||| || ||| | || ||||| ||||||||||||
Sbjct: 2033 cttgaatctgttggtggcaacttctcctttaaaccaggcgtgagctcgtttaatgtgatc 1974
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>gb|AC004669.3| Arabidopsis thaliana chromosome 2 clone F7F1 map m283, complete
             sequence
          Length = 89779

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 144/180 (80%)
 Strand = Plus / Minus

                                                                         
Query: 523   ggtttccacccactctcctgcatctttcgtgcctgccgttgtctttgctcaagcctcaac 582
             |||||||| || ||||| ||||||| ||  ||||| | ||||||||| || | |||||||
Sbjct: 79010 ggtttccaacctctctcttgcatctctctcgcctgtctttgtctttgttccaacctcaac 78951

                                                                         
Query: 583   ttctcagcatttgctctttcatattcaccattctctaggcacctctggtccggtcgcaat 642
             ||||| || ||| |  ||||||| || || |||||||   |||||||||||||||  | |
Sbjct: 78950 ttctctgcgtttcccatttcatactctcccttctctaaatacctctggtccggtctaagt 78891

                                                                         
Query: 643   cttgagtctgtgggtggcagtttttccttcaatccangggtaagctcatttaatgtgatc 702
             ||||| ||||| |||||||  || ||||| || ||| | || ||||| ||||||||||||
Sbjct: 78890 cttgaatctgttggtggcaacttctcctttaaaccaggcgtgagctcgtttaatgtgatc 78831
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>ref|NM_179012.2| Arabidopsis thaliana oxysterol binding AT4G08180 transcript variant
            AT4G08180.2 mRNA, complete cds
          Length = 2987

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                        
Query: 623  acctctggtccggtcgcaatcttgagtctgtgggtggcagtttttccttcaatccanggg 682
            ||||||||||||||||||  ||||| || || ||||||||  | ||||| |  ||| | |
Sbjct: 2446 acctctggtccggtcgcagccttgaatccgttggtggcagcctctccttaagcccaggtg 2387

                               
Query: 683  taagctcatttaatgtgat 701
            |||||||||| ||||||||
Sbjct: 2386 taagctcattcaatgtgat 2368
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>ref|NM_202789.1| Arabidopsis thaliana oxysterol binding AT4G08180 transcript variant
            AT4G08180.3 mRNA, complete cds
          Length = 2987

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                        
Query: 623  acctctggtccggtcgcaatcttgagtctgtgggtggcagtttttccttcaatccanggg 682
            ||||||||||||||||||  ||||| || || ||||||||  | ||||| |  ||| | |
Sbjct: 2446 acctctggtccggtcgcagccttgaatccgttggtggcagcctctccttaagcccaggtg 2387

                               
Query: 683  taagctcatttaatgtgat 701
            |||||||||| ||||||||
Sbjct: 2386 taagctcattcaatgtgat 2368
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>ref|NM_116887.2| Arabidopsis thaliana oxysterol binding AT4G08180 transcript variant
            AT4G08180.1 mRNA, complete cds
          Length = 2990

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                        
Query: 623  acctctggtccggtcgcaatcttgagtctgtgggtggcagtttttccttcaatccanggg 682
            ||||||||||||||||||  ||||| || || ||||||||  | ||||| |  ||| | |
Sbjct: 2449 acctctggtccggtcgcagccttgaatccgttggtggcagcctctccttaagcccaggtg 2390

                               
Query: 683  taagctcatttaatgtgat 701
            |||||||||| ||||||||
Sbjct: 2389 taagctcattcaatgtgat 2371
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>gb|AY139750.1| Arabidopsis thaliana AT4g08180/T12G13_20 mRNA, complete cds
          Length = 2987

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                        
Query: 623  acctctggtccggtcgcaatcttgagtctgtgggtggcagtttttccttcaatccanggg 682
            ||||||||||||||||||  ||||| || || ||||||||  | ||||| |  ||| | |
Sbjct: 2447 acctctggtccggtcgcagccttgaatccgttggtggcagcctctccttaagcccaggtg 2388

                               
Query: 683  taagctcatttaatgtgat 701
            |||||||||| ||||||||
Sbjct: 2387 taagctcattcaatgtgat 2369
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>dbj|AK221773.1| Arabidopsis thaliana mRNA for hypothetical protein, partial cds,
           clone: RAFL21-68-N16
          Length = 1523

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                       
Query: 623 acctctggtccggtcgcaatcttgagtctgtgggtggcagtttttccttcaatccanggg 682
           ||||||||||||||||||  ||||| || || ||||||||  | ||||| |  ||| | |
Sbjct: 972 acctctggtccggtcgcagccttgaatccgttggtggcagcctctccttaagcccaggtg 913

                              
Query: 683 taagctcatttaatgtgat 701
           |||||||||| ||||||||
Sbjct: 912 taagctcattcaatgtgat 894
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>emb|BX826314.1|CNS0A4MX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB14ZH12 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1184

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                       
Query: 623 acctctggtccggtcgcaatcttgagtctgtgggtggcagtttttccttcaatccanggg 682
           ||||||||||||||||||  ||||| || || ||||||||  | ||||| |  ||| | |
Sbjct: 668 acctctggtccggtcgcagccttgaatccgttggtggcagcctctccttaagcccaggtg 609

                              
Query: 683 taagctcatttaatgtgat 701
           |||||||||| ||||||||
Sbjct: 608 taagctcattcaatgtgat 590
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>gb|AC009660.15| Homo sapiens chromosome 15, clone RP11-424J10, complete sequence
          Length = 214166

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 563   gtctttgctcaagcctcaacttctcag 589
             |||||||||||||||||| ||||||||
Sbjct: 19058 gtctttgctcaagcctcaccttctcag 19032
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>gb|AC166653.5| Mus musculus BAC clone RP24-84J23 from chromosome 14, complete sequence
          Length = 223142

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 336   attccaaaagaagaacagagaa 357
             ||||||||||||||||||||||
Sbjct: 67515 attccaaaagaagaacagagaa 67536
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>gb|AC166822.3| Mus musculus BAC clone RP24-117F20 from chromosome 14, complete sequence
          Length = 186860

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 336    attccaaaagaagaacagagaa 357
              ||||||||||||||||||||||
Sbjct: 160217 attccaaaagaagaacagagaa 160238
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>gb|BC074646.1| Xenopus tropicalis serine/arginine repetitive matrix 1, mRNA (cDNA
            clone MGC:69349 IMAGE:5309191), complete cds
          Length = 3441

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 3    ttttaagggcaaatgaaactgc 24
            ||||||||||||||||||||||
Sbjct: 2844 ttttaagggcaaatgaaactgc 2865
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>ref|NM_001005645.1| Xenopus tropicalis serine/arginine repetitive matrix 1 (srrm1), mRNA
          Length = 3441

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 3    ttttaagggcaaatgaaactgc 24
            ||||||||||||||||||||||
Sbjct: 2844 ttttaagggcaaatgaaactgc 2865
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>gb|AC158165.1| Mus musculus BAC clone RP23-462M21 from chromosome 6, complete sequence
          Length = 179032

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 336    attccaaaagaagaacagagaa 357
              ||||||||||||||||||||||
Sbjct: 121756 attccaaaagaagaacagagaa 121735
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>gb|AC101931.8| Mus musculus chromosome 1, clone RP24-63O23, complete sequence
          Length = 209705

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 336   attccaaaagaagaacagagaa 357
             ||||||||||||||||||||||
Sbjct: 63050 attccaaaagaagaacagagaa 63071
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>gb|AC121298.10| Mus musculus chromosome 5, clone RP23-377E6, complete sequence
          Length = 194045

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 572   caagcctcaacttctcagcat 592
             |||||||||||||||||||||
Sbjct: 13248 caagcctcaacttctcagcat 13268
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>gb|AC151759.1| Ornithorhynchus anatinus chromosome UNK clone OABb-454P24, complete
              sequence
          Length = 147999

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 555    ctgccgttgtctttgctcaag 575
              |||||||||||||||||||||
Sbjct: 147854 ctgccgttgtctttgctcaag 147874
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>gb|AC168268.2| Mus musculus BAC clone RP23-339K12 from chromosome 17, complete
             sequence
          Length = 184085

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 590   catttgctctttcatattcaccattctct 618
             |||||||||||||| | ||||||||||||
Sbjct: 83423 catttgctctttcaaactcaccattctct 83395
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>gb|AC160993.5| Mus musculus BAC clone RP23-159D11 from chromosome 16, complete sequence
          Length = 187536

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 324    tggaaccaacagattccaaaagaag 348
              ||||||||||||| |||||||||||
Sbjct: 149638 tggaaccaacagagtccaaaagaag 149614
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>gb|AC151667.1| Pan troglodytes chromosome X clone RP43-007H19 map human ortholog q28,
             complete sequence
          Length = 200796

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 448   ctcttttctctggattcccag 468
             |||||||||||||||||||||
Sbjct: 50742 ctcttttctctggattcccag 50762
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>gb|AC120413.20| Mus musculus chromosome 5, clone RP24-458L16, complete sequence
          Length = 163011

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 572   caagcctcaacttctcagcat 592
             |||||||||||||||||||||
Sbjct: 76307 caagcctcaacttctcagcat 76287
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>gb|AC145689.4| Pan troglodytes BAC clone CH251-184I22 from X, complete sequence
          Length = 181915

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 448    ctcttttctctggattcccag 468
              |||||||||||||||||||||
Sbjct: 165530 ctcttttctctggattcccag 165550
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>emb|CR388131.10| Zebrafish DNA sequence from clone DKEY-114G9 in linkage group 1, complete
              sequence
          Length = 169443

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 442    cagctgctcttttctctggat 462
              |||||||||||||||||||||
Sbjct: 161206 cagctgctcttttctctggat 161186
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>gb|AC125313.2| Mus musculus BAC clone RP24-353A16 from 5, complete sequence
          Length = 152433

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 572    caagcctcaacttctcagcat 592
              |||||||||||||||||||||
Sbjct: 146622 caagcctcaacttctcagcat 146602
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>gb|AC125343.2| Mus musculus BAC clone RP24-537A5 from 5, complete sequence
          Length = 131476

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 572   caagcctcaacttctcagcat 592
             |||||||||||||||||||||
Sbjct: 90426 caagcctcaacttctcagcat 90446
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>gb|AC155955.2| Xenopus tropicalis clone CH216-151P9, complete sequence
          Length = 166977

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 121   atattcagatatacacaaatg 141
             |||||||||||||||||||||
Sbjct: 39889 atattcagatatacacaaatg 39909
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>gb|AC148217.15| Medicago truncatula clone mth2-20c19, complete sequence
          Length = 113210

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 587   cagcatttgctctttcatatt 607
             |||||||||||||||||||||
Sbjct: 46146 cagcatttgctctttcatatt 46126
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>gb|AC087871.9| Genomic sequence for Mus musculus, clone RP23-334N23, complete sequence
          Length = 117000

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 303   tctagtataaaccactaaaaa 323
             |||||||||||||||||||||
Sbjct: 50376 tctagtataaaccactaaaaa 50396
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>gb|AC007846.12| Homo sapiens chromosome 17, clone CTC-803F22, complete sequence
          Length = 160034

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 330   caacagattccaaaagaagaa 350
             |||||||||||||||||||||
Sbjct: 81367 caacagattccaaaagaagaa 81347
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>gb|AC154497.2| Mus musculus BAC clone RP24-112C15 from chromosome 17, complete
             sequence
          Length = 176161

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 590   catttgctctttcatattcaccattctct 618
             |||||||||||||| | ||||||||||||
Sbjct: 35311 catttgctctttcaaactcaccattctct 35283
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>gb|AC068718.6| Homo sapiens BAC clone RP11-123G24 from 2, complete sequence
          Length = 161955

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 83    catgctttactattctttggc 103
             |||||||||||||||||||||
Sbjct: 48704 catgctttactattctttggc 48684
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>gb|U82671.5| Homo sapiens chromosome X multiple clones map q28, complete sequence
          Length = 324604

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 448    ctcttttctctggattcccag 468
              |||||||||||||||||||||
Sbjct: 160940 ctcttttctctggattcccag 160960
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>gb|AC117622.10| Mus musculus chromosome 5, clone RP23-114L5, complete sequence
          Length = 185368

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 572    caagcctcaacttctcagcat 592
              |||||||||||||||||||||
Sbjct: 147067 caagcctcaacttctcagcat 147087
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>emb|AL928988.14| Mouse DNA sequence from clone RP23-402M7 on chromosome 2, complete
             sequence
          Length = 121977

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 572   caagcctcaacttctcagcat 592
             |||||||||||||||||||||
Sbjct: 50766 caagcctcaacttctcagcat 50786
to top
>emb|BX005220.7| Zebrafish DNA sequence from clone DKEY-82D4 in linkage group 1, complete
              sequence
          Length = 170985

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 442    cagctgctcttttctctggat 462
              |||||||||||||||||||||
Sbjct: 156667 cagctgctcttttctctggat 156647
to top
>gb|BC072570.1| Mus musculus cDNA clone IMAGE:5719559
          Length = 4255

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 572  caagcctcaacttctcagcat 592
            |||||||||||||||||||||
Sbjct: 1149 caagcctcaacttctcagcat 1129
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>emb|CT010467.6| Mouse DNA sequence from clone RP23-81C12 on chromosome 17, complete
            sequence
          Length = 216559

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 590  catttgctctttcatattcaccattctct 618
            |||||||||||||| | ||||||||||||
Sbjct: 9850 catttgctctttcaaactcaccattctct 9878
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>gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome 17, complete sequence
          Length = 199737

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   tacatattcagatatacaca 137
             ||||||||||||||||||||
Sbjct: 27749 tacatattcagatatacaca 27768
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>gb|AC150653.5| Bos taurus  BAC CH240-226L9 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 158246

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   atacacaaatggcctatata 150
             ||||||||||||||||||||
Sbjct: 54687 atacacaaatggcctatata 54706
to top
>gb|AC150694.2| Bos taurus  BAC CH240-144A17 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 163920

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   atacacaaatggcctatata 150
             ||||||||||||||||||||
Sbjct: 15470 atacacaaatggcctatata 15451
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>gb|AC090900.3| Drosophila melanogaster clone BACR30C07, complete sequence
          Length = 186286

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 241   ggaaaaacaatgtatctgaaagggcagc 268
             |||||||||||||||||||  |||||||
Sbjct: 55303 ggaaaaacaatgtatctgattgggcagc 55276
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>gb|AC127361.4| Mus musculus BAC clone RP23-125M8 from chromosome 17, complete sequence
          Length = 201331

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 336    attccaaaagaagaacagag 355
              ||||||||||||||||||||
Sbjct: 155743 attccaaaagaagaacagag 155762
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>gb|AC154605.2| Mus musculus BAC clone RP23-348G3 from chromosome 16, complete sequence
          Length = 191050

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 336   attccaaaagaagaacagag 355
             ||||||||||||||||||||
Sbjct: 68557 attccaaaagaagaacagag 68576
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>emb|CR956370.6| Pig DNA sequence from clone CH242-181F19 on chromosome 7, complete
              sequence
          Length = 178646

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 614    tctctaggcacctctggtcc 633
              ||||||||||||||||||||
Sbjct: 100237 tctctaggcacctctggtcc 100218
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>gb|BC056062.1| Xenopus laevis chronic myelogenous leukemia tumor antigen 66, mRNA
           (cDNA clone MGC:69032 IMAGE:4964693), complete cds
          Length = 2026

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 599 tttcatattcaccattctct 618
           ||||||||||||||||||||
Sbjct: 752 tttcatattcaccattctct 733
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>gb|AC091302.5| Oryza sativa chromosome 3 BAC OSJNBb0015I21 genomic sequence,
            complete sequence
          Length = 101073

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 235  atgtacggaaaaacaatgta 254
            ||||||||||||||||||||
Sbjct: 8490 atgtacggaaaaacaatgta 8509
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>gb|AC146588.14| Medicago truncatula clone mth2-145c3, complete sequence
          Length = 116965

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 587    cagcatttgctctttcatat 606
              ||||||||||||||||||||
Sbjct: 107321 cagcatttgctctttcatat 107340
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>emb|AL583806.7| Human DNA sequence from clone RP11-10F17 on chromosome 6 Contains the
             C6orf58 gene and the 5' end of a novel gene, complete
             sequence
          Length = 114100

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 599   tttcatattcaccattctct 618
             ||||||||||||||||||||
Sbjct: 37519 tttcatattcaccattctct 37538
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>emb|AL356296.12| Human DNA sequence from clone RP11-340B1 on chromosome 13, complete
             sequence
          Length = 132589

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     ttttaagggcaaatgaaact 22
             ||||||||||||||||||||
Sbjct: 23899 ttttaagggcaaatgaaact 23880
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>emb|AL160004.18| Human DNA sequence from clone RP5-1068B5 on chromosome 1q42.11-43
             Contains a pseudogene similar to part of ribosomal protein
             L21 (RPL21), the ACTA1 gene for actin, alpha 1, skeletal
             muscle, the 3' end of the NUP133 gene for nucleoporin
             133kDa and two CpG islands, complete sequence
          Length = 86173

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 653   tgggtggcagtttttccttc 672
             ||||||||||||||||||||
Sbjct: 56473 tgggtggcagtttttccttc 56492
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>gb|AC164578.5| Mus musculus  BAC RP23-15E20 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 225564

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 331    aacagattccaaaagaagaa 350
              ||||||||||||||||||||
Sbjct: 166627 aacagattccaaaagaagaa 166608
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>emb|AL161571.2|ATCHRIV67 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 67
          Length = 200001

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 31     atgccatagattgataagagatat 54
              |||||||||| |||||||||||||
Sbjct: 105530 atgccatagactgataagagatat 105507
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>emb|AL161510.2|ATCHRIV22 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 22
          Length = 198131

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                      
Query: 623    acctctggtccggtcgcaatcttgagtctgtgggtggcag 662
              ||||||||||||||||||  ||||| || || ||||||||
Sbjct: 139955 acctctggtccggtcgcagccttgaatccgttggtggcag 139916
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>emb|AL080252.2|ATT12G13 Arabidopsis thaliana DNA chromosome 4, BAC clone T12G13, partial
             sequence (ESSA project)
          Length = 91226

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 623   acctctggtccggtcgcaatcttgagtctgtgggtggcag 662
             ||||||||||||||||||  ||||| || || ||||||||
Sbjct: 11052 acctctggtccggtcgcagccttgaatccgttggtggcag 11013
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>emb|AL035602.1|ATT29A15 Arabidopsis thaliana DNA chromosome 4, BAC clone T29A15 (ESSA project)
          Length = 95679

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 31    atgccatagattgataagagatat 54
             |||||||||| |||||||||||||
Sbjct: 44820 atgccatagactgataagagatat 44797
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>gb|AC101690.7| Mus musculus chromosome 7, clone RP23-218E6, complete sequence
          Length = 229964

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 521   gaggtttccacccactctcc 540
             ||||||||||||||||||||
Sbjct: 12268 gaggtttccacccactctcc 12287
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>gb|AC009930.7| Homo sapiens chromosome 8, clone RP11-114O8, complete sequence
          Length = 165662

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 336   attccaaaagaagaacagag 355
             ||||||||||||||||||||
Sbjct: 83042 attccaaaagaagaacagag 83023
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>gb|AC084823.11| Mus Musculus Strain C57BL6/J chromosome 8 BAC, RP23-290L7, Complete
              Sequence, complete sequence
          Length = 212133

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 432    gcagccttcccagctgctct 451
              ||||||||||||||||||||
Sbjct: 182775 gcagccttcccagctgctct 182756
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>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete
             sequence
          Length = 135510

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 526   ttccacccactctcctgcatctttcgtgcctg 557
             ||||| ||||||||||||||||| | ||||||
Sbjct: 99235 ttccaaccactctcctgcatcttccttgcctg 99266
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>gb|AC023577.6| Homo sapiens chromosome 18, clone RP11-645D5, complete sequence
          Length = 166503

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    atgcatgctttactattctt 99
             ||||||||||||||||||||
Sbjct: 76326 atgcatgctttactattctt 76345
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>dbj|AK163197.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:A730084F04
            product:unclassifiable, full insert sequence
          Length = 2337

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 581  acttctcagcatttgctctt 600
            ||||||||||||||||||||
Sbjct: 2271 acttctcagcatttgctctt 2252
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>emb|CR338865.2| Gallus gallus finished cDNA, clone ChEST1020f23
          Length = 893

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 133 acacaaatggcctatataac 152
           ||||||||||||||||||||
Sbjct: 281 acacaaatggcctatataac 300
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 526      ttccacccactctcctgcatctttcgtgcctg 557
                ||||| ||||||||||||||||| | ||||||
Sbjct: 21235124 ttccaaccactctcctgcatcttccttgcctg 21235093
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 235      atgtacggaaaaacaatgta 254
                ||||||||||||||||||||
Sbjct: 15942888 atgtacggaaaaacaatgta 15942869
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>gb|AF288779.1|AF288779 Homo sapiens skeletal actin gene, promoter, partial sequence
          Length = 1474

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 653  tgggtggcagtttttccttc 672
            ||||||||||||||||||||
Sbjct: 1008 tgggtggcagtttttccttc 989
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>gb|AC100735.15| Mus musculus chromosome 7, clone RP24-331F7, complete sequence
          Length = 179974

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 521    gaggtttccacccactctcc 540
              ||||||||||||||||||||
Sbjct: 173467 gaggtttccacccactctcc 173486
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>gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B24 genomic sequence, complete
              sequence
          Length = 152883

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 235    atgtacggaaaaacaatgta 254
              ||||||||||||||||||||
Sbjct: 138725 atgtacggaaaaacaatgta 138744
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>gb|AC104946.4| Homo sapiens chromosome 8, clone RP11-946L20, complete sequence
          Length = 200292

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 336  attccaaaagaagaacagag 355
            ||||||||||||||||||||
Sbjct: 4786 attccaaaagaagaacagag 4767
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>dbj|AP004131.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1057_F01
          Length = 120026

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 235   atgtacggaaaaacaatgta 254
             ||||||||||||||||||||
Sbjct: 86563 atgtacggaaaaacaatgta 86544
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>gb|AE003812.4| Drosophila melanogaster chromosome 2R, section 38 of 73 of the complete
              sequence
          Length = 255772

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 241    ggaaaaacaatgtatctgaaagggcagc 268
              |||||||||||||||||||  |||||||
Sbjct: 180160 ggaaaaacaatgtatctgattgggcagc 180133
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 319     aaaaatggaaccaacagatt 338
               ||||||||||||||||||||
Sbjct: 5976052 aaaaatggaaccaacagatt 5976033
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>gb|AC159275.6| Mus musculus BAC clone RP23-367C13 from chromosome 8, complete sequence
          Length = 195034

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 336    attccaaaagaagaacagag 355
              ||||||||||||||||||||
Sbjct: 103656 attccaaaagaagaacagag 103637
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 526      ttccacccactctcctgcatctttcgtgcctg 557
                ||||| ||||||||||||||||| | ||||||
Sbjct: 21246388 ttccaaccactctcctgcatcttccttgcctg 21246357
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>gb|AC004306.1|AC004306 Drosophila melanogaster DNA sequence (P1 DS01386 (D198)), complete
             sequence
          Length = 61849

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 241   ggaaaaacaatgtatctgaaagggcagc 268
             |||||||||||||||||||  |||||||
Sbjct: 15777 ggaaaaacaatgtatctgattgggcagc 15750
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>gb|M79353.1|HIVENVMA7 Human immunodeficiency virus type 1 (clone MA7) glycoprotein 120
           (env) gene, 5' end
          Length = 1566

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 593 ttgctctttcatattcacca 612
           ||||||||||||||||||||
Sbjct: 480 ttgctctttcatattcacca 499
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>emb|AL603837.8| Mouse DNA sequence from clone RP23-254F2 on chromosome 15, complete
              sequence
          Length = 202904

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 432    gcagccttcccagctgctct 451
              ||||||||||||||||||||
Sbjct: 194122 gcagccttcccagctgctct 194103
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>gb|AC164983.2| Mus musculus BAC clone RP23-16J24 from chromosome 17, complete sequence
          Length = 224370

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   tacatattcagatatacaca 137
             ||||||||||||||||||||
Sbjct: 95841 tacatattcagatatacaca 95860
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>emb|AL731811.24| Mouse DNA sequence from clone RP23-60A1 on chromosome X, complete
              sequence
          Length = 167102

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 581    acttctcagcatttgctctt 600
              ||||||||||||||||||||
Sbjct: 148000 acttctcagcatttgctctt 148019


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,400,902
Number of Sequences: 3902068
Number of extensions: 6400902
Number of successful extensions: 128142
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 127726
Number of HSP's gapped (non-prelim): 405
length of query: 704
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 681
effective length of database: 17,143,297,704
effective search space: 11674585736424
effective search space used: 11674585736424
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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