| Clone Name | rbags31b16 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK067776.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119K02, full insert sequence Length = 2242 Score = 529 bits (267), Expect = e-147 Identities = 402/447 (89%) Strand = Plus / Minus Query: 200 cgagctcatttagcacttttgtacatgttgtcaattgcaccctggtagtacttgagcaac 259 ||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||| Sbjct: 2050 cgagctcatttggcacttctgtacatgttgtcaattgttccctggtagtacttgagcaat 1991 Query: 260 tggggccgcttccttttatatgttggagtgatcaagtcgcgttccatgtcaaacggcact 319 || || |||||| |||||||||||||||| ||||| || || ||||||||||| |||||| Sbjct: 1990 tgagggcgcttctttttatatgttggagtaatcaaatcacggtccatgtcaaatggcact 1931 Query: 320 gggtcaagatgtacagctcttatcatttcaaaacctttgagcttcttctcttttcctgtt 379 || |||||||||||||| |||| | ||||||||||||||||||||||||||||||| | Sbjct: 1930 ggttcaagatgtacagcctttatgaattcaaaacctttgagcttcttctcttttcctact 1871 Query: 380 tttgaaagttcacccaaaatatattcttttgctttcggattctcacacagtgcctcaaaa 439 ||||| ||||| |||||||| |||||||||||||| || |||||||||| |||||| ||| Sbjct: 1870 tttgacagttctcccaaaatgtattcttttgctttggggttctcacacaatgcctccaaa 1811 Query: 440 tcaccactgattccgtttccctcagcccagctctcaagagcttccttgttaggattgact 499 |||||||||||||| ||| | ||||||||||||| | ||||||||||| |||||||| Sbjct: 1810 tcaccactgattccatttgctgcagcccagctctccaatgcttccttgtttggattgacc 1751 Query: 500 acggcaacaaggaatgactcgaaactatttccatatacccatatcgagtctatagcagaa 559 || ||||||||||||||||| || ||||| ||||||||||||||||| |||||||||||| Sbjct: 1750 acagcaacaaggaatgactcaaagctattcccatatacccatatcgaatctatagcagaa 1691 Query: 560 acaacaccgtaaatgttctccaaattttcaactgctacatattctccttgtgaaagcttg 619 |||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1690 acaagaccataaatgttctccaaattttctactgctacatattctccttgtgaaagcttg 1631 Query: 620 aagatattctttttgcggtctatgatt 646 ||||||||||||||||| ||||||||| Sbjct: 1630 aagatattctttttgcgatctatgatt 1604
>gb|AY104656.1| Zea mays PCO136477 mRNA sequence Length = 1415 Score = 297 bits (150), Expect = 2e-77 Identities = 366/438 (83%) Strand = Plus / Minus Query: 209 ttagcacttttgtacatgttgtcaattgcaccctggtagtacttgagcaactggggccgc 268 |||||||||||||||||||||||||| | ||||||||||||||||||| || || ||| Sbjct: 1014 ttagcacttttgtacatgttgtcaatcacgccctggtagtacttgagcagttgcggacgc 955 Query: 269 ttccttttatatgttggagtgatcaagtcgcgttccatgtcaaacggcactgggtcaaga 328 ||| |||| ||||| || |||||||| || || |||||||||||||| ||||| || || Sbjct: 954 ttctttttgtatgtcggggtgatcaaatcacggtccatgtcaaacggtactggttccagg 895 Query: 329 tgtacagctcttatcatttcaaaacctttgagcttcttctcttttcctgtttttgaaagt 388 || ||| | ||| | |||||||||||||||| |||||||||||||| || |||| || Sbjct: 894 tgcacatcctttacgaattcaaaacctttgagcctcttctcttttcctattcttgacagc 835 Query: 389 tcacccaaaatatattcttttgctttcggattctcacacagtgcctcaaaatcaccactg 448 || || ||||| |||||||||| | | ||||| | |||| | ||| ||||||||||| Sbjct: 834 tctcctaaaatgtattcttttgttcttggattattgcacaaggactcgaaatcaccactt 775 Query: 449 attccgtttccctcagcccagctctcaagagcttccttgttaggattgactacggcaaca 508 ||||| ||| | ||||||| ||||| ||| | |||||||| |||||||| || |||||| Sbjct: 774 attccatttgctgcagcccaactctcgagaacctccttgttgggattgaccacagcaaca 715 Query: 509 aggaatgactcgaaactatttccatatacccatatcgagtctatagcagaaacaacaccg 568 || || ||||| || || || ||||||| |||||||||||||||||||||||||| ||| Sbjct: 714 agaaaggactcaaagctgttcccatatatccatatcgagtctatagcagaaacaagacca 655 Query: 569 taaatgttctccaaattttcaactgctacatattctccttgtgaaagcttgaagatattc 628 |||| |||||||||||||||||||| |||||||| || |||||||| ||||| |||||| Sbjct: 654 taaacattctccaaattttcaactgccacatattcaccctgtgaaagtttgaatatattc 595 Query: 629 tttttgcggtctatgatt 646 ||||| |||||||||||| Sbjct: 594 tttttacggtctatgatt 577
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 190 bits (96), Expect = 4e-45 Identities = 162/184 (88%) Strand = Plus / Minus Query: 361 cttcttctcttttcctgtttttgaaagttcacccaaaatatattcttttgctttcggatt 420 |||||||||||||||| |||||| ||||| |||||||| |||||||||||||| || || Sbjct: 26629444 cttcttctcttttcctacttttgacagttctcccaaaatgtattcttttgctttggggtt 26629385 Query: 421 ctcacacagtgcctcaaaatcaccactgattccgtttccctcagcccagctctcaagagc 480 |||||||| |||||| ||||||||||||||||| ||| | ||||||||||||| | || Sbjct: 26629384 ctcacacaatgcctccaaatcaccactgattccatttgctgcagcccagctctccaatgc 26629325 Query: 481 ttccttgttaggattgactacggcaacaaggaatgactcgaaactatttccatataccca 540 ||||||||| |||||||| || ||||||||||||||||| || ||||| ||||||||||| Sbjct: 26629324 ttccttgtttggattgaccacagcaacaaggaatgactcaaagctattcccatataccca 26629265 Query: 541 tatc 544 |||| Sbjct: 26629264 tatc 26629261 Score = 165 bits (83), Expect = 2e-37 Identities = 95/99 (95%) Strand = Plus / Minus Query: 548 tctatagcagaaacaacaccgtaaatgttctccaaattttcaactgctacatattctcct 607 |||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 26629091 tctatagcagaaacaagaccataaatgttctccaaattttctactgctacatattctcct 26629032 Query: 608 tgtgaaagcttgaagatattctttttgcggtctatgatt 646 ||||||||||||||||||||||||||||| ||||||||| Sbjct: 26629031 tgtgaaagcttgaagatattctttttgcgatctatgatt 26628993 Score = 133 bits (67), Expect = 8e-28 Identities = 109/123 (88%) Strand = Plus / Minus Query: 240 cctggtagtacttgagcaactggggccgcttccttttatatgttggagtgatcaagtcgc 299 ||||||||||||||||||| || || |||||| |||||||||||||||| ||||| || | Sbjct: 26629680 cctggtagtacttgagcaattgagggcgcttctttttatatgttggagtaatcaaatcac 26629621 Query: 300 gttccatgtcaaacggcactgggtcaagatgtacagctcttatcatttcaaaacctttga 359 | ||||||||||| |||||||| |||||||||||||| |||| | |||||||||||||| Sbjct: 26629620 ggtccatgtcaaatggcactggttcaagatgtacagcctttatgaattcaaaacctttga 26629561 Query: 360 gct 362 ||| Sbjct: 26629560 gct 26629558 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 572 atgttctccaaattttcaactgctacatattctccttgtgaaagcttgaagatattcttt 631 |||||||||||||| || || || |||||||||||||| || ||||||||||| ||||| Sbjct: 28056034 atgttctccaaattctccacagcgacatattctccttgggagagcttgaagatgttcttc 28056093 Query: 632 ttgcggtctatgat 645 ||||| || ||||| Sbjct: 28056094 ttgcgatcaatgat 28056107 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 200 cgagctcatttagcacttttgtacatgttgtcaattg 236 ||||||||||| |||||| |||||||||||||||||| Sbjct: 26629972 cgagctcatttggcacttctgtacatgttgtcaattg 26629936
>dbj|AP003212.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0049H05 Length = 161934 Score = 190 bits (96), Expect = 4e-45 Identities = 162/184 (88%) Strand = Plus / Minus Query: 361 cttcttctcttttcctgtttttgaaagttcacccaaaatatattcttttgctttcggatt 420 |||||||||||||||| |||||| ||||| |||||||| |||||||||||||| || || Sbjct: 103158 cttcttctcttttcctacttttgacagttctcccaaaatgtattcttttgctttggggtt 103099 Query: 421 ctcacacagtgcctcaaaatcaccactgattccgtttccctcagcccagctctcaagagc 480 |||||||| |||||| ||||||||||||||||| ||| | ||||||||||||| | || Sbjct: 103098 ctcacacaatgcctccaaatcaccactgattccatttgctgcagcccagctctccaatgc 103039 Query: 481 ttccttgttaggattgactacggcaacaaggaatgactcgaaactatttccatataccca 540 ||||||||| |||||||| || ||||||||||||||||| || ||||| ||||||||||| Sbjct: 103038 ttccttgtttggattgaccacagcaacaaggaatgactcaaagctattcccatataccca 102979 Query: 541 tatc 544 |||| Sbjct: 102978 tatc 102975 Score = 165 bits (83), Expect = 2e-37 Identities = 95/99 (95%) Strand = Plus / Minus Query: 548 tctatagcagaaacaacaccgtaaatgttctccaaattttcaactgctacatattctcct 607 |||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 102805 tctatagcagaaacaagaccataaatgttctccaaattttctactgctacatattctcct 102746 Query: 608 tgtgaaagcttgaagatattctttttgcggtctatgatt 646 ||||||||||||||||||||||||||||| ||||||||| Sbjct: 102745 tgtgaaagcttgaagatattctttttgcgatctatgatt 102707 Score = 133 bits (67), Expect = 8e-28 Identities = 109/123 (88%) Strand = Plus / Minus Query: 240 cctggtagtacttgagcaactggggccgcttccttttatatgttggagtgatcaagtcgc 299 ||||||||||||||||||| || || |||||| |||||||||||||||| ||||| || | Sbjct: 103394 cctggtagtacttgagcaattgagggcgcttctttttatatgttggagtaatcaaatcac 103335 Query: 300 gttccatgtcaaacggcactgggtcaagatgtacagctcttatcatttcaaaacctttga 359 | ||||||||||| |||||||| |||||||||||||| |||| | |||||||||||||| Sbjct: 103334 ggtccatgtcaaatggcactggttcaagatgtacagcctttatgaattcaaaacctttga 103275 Query: 360 gct 362 ||| Sbjct: 103274 gct 103272 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 200 cgagctcatttagcacttttgtacatgttgtcaattg 236 ||||||||||| |||||| |||||||||||||||||| Sbjct: 103686 cgagctcatttggcacttctgtacatgttgtcaattg 103650
>gb|DQ174259.1| Gossypium hirsutum ACS-like protein (ACS1) mRNA, complete cds Length = 2196 Score = 125 bits (63), Expect = 2e-25 Identities = 105/119 (88%) Strand = Plus / Minus Query: 254 agcaactggggccgcttccttttatatgttggagtgatcaagtcgcgttccatgtcaaac 313 ||||||||||||| |||| | |||||||||||||||| | ||| ||||||||||| ||| Sbjct: 1928 agcaactggggcctcttcttcttatatgttggagtgagaaggtctcgttccatgtcgaac 1869 Query: 314 ggcactgggtcaagatgtacagctcttatcatttcaaaacctttgagcttcttctcttt 372 |||| |||||||||||| |||||| |||| |||||||||||||| ||||| |||||||| Sbjct: 1868 ggcattgggtcaagatggacagcttttatgatttcaaaacctttcagctttttctcttt 1810 Score = 97.6 bits (49), Expect = 4e-17 Identities = 130/157 (82%) Strand = Plus / Minus Query: 462 cagcccagctctcaagagcttccttgttaggattgactacggcaacaaggaatgactcga 521 |||||||||| ||||| |||||||| || || || || || ||||||||||| ||||| | Sbjct: 1720 cagcccagctttcaagtgcttccttattggggttaacaaccgcaacaaggaacgactcaa 1661 Query: 522 aactatttccatatacccatatcgagtctatagcagaaacaacaccgtaaatgttctcca 581 | || ||||| || | ||||||||| || ||||| || || | ||||||||||||||||| Sbjct: 1660 agctgtttccgtaaatccatatcgaatcaatagctgacacgagaccgtaaatgttctcca 1601 Query: 582 aattttcaactgctacatattctccttgtgaaagctt 618 || ||||| || |||||||| |||||||||||||| Sbjct: 1600 ggttctcaacagcaacatattcaccttgtgaaagctt 1564
>emb|CT033771.1| Medicago truncatula chromosome 5 clone mth2-15i14, COMPLETE SEQUENCE Length = 116146 Score = 85.7 bits (43), Expect = 2e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 240 cctggtagtacttgagcaactggggccgcttccttttatatgttggagtgatcaagtcgc 299 |||| ||||| || ||||||||||||| |||| | ||||||||||||||||| | ||| | Sbjct: 28833 cctgatagtatttaagcaactggggcctcttcttcttatatgttggagtgataaggtcac 28774 Query: 300 gttccatgtcaaacggcactgggtcaagatg 330 ||||||| ||||| || |||||||||||||| Sbjct: 28773 gttccatatcaaatggaactgggtcaagatg 28743 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 240 cctggtagtacttgagcaactggggccgcttccttttatatgttggagtgatcaagtcgc 299 |||| ||||| || |||||||| |||| |||| | ||||||||||||||||| | ||| | Sbjct: 41850 cctgatagtatttcagcaactgaggcctcttcttcttatatgttggagtgataaggtcac 41791 Query: 300 gttccatgtcaaacggcactgggtcaagatg 330 ||||||| ||||| || |||||||||||||| Sbjct: 41790 gttccatatcaaatggaactgggtcaagatg 41760 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 569 taaatgttctccaaattttcaactgctacatattctccttgtgaaagcttgaagatattc 628 ||||| ||||||| |||||||| || |||||||||||||||||||||||||| |||||| Sbjct: 40438 taaatattctccaggttttcaacggcaacatattctccttgtgaaagcttgaatatattc 40379 Query: 629 tt 630 || Sbjct: 40378 tt 40377 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 569 taaatgttctccaaattttcaactgctacatattctccttgtgaaagcttgaagatattc 628 ||||| ||||||| |||||||| || |||||||||||||| ||||||||||| |||||| Sbjct: 27423 taaatattctccaggttttcaacggcaacatattctccttgggaaagcttgaatatattc 27364 Query: 629 tt 630 || Sbjct: 27363 tt 27362
>emb|AJ006025.1|CAR6025 Cicer arietinum mRNA for acyl-coA synthetase, partial Length = 802 Score = 83.8 bits (42), Expect = 7e-13 Identities = 99/118 (83%) Strand = Plus / Minus Query: 213 cacttttgtacatgttgtcaattgcaccctggtagtacttgagcaactggggccgcttcc 272 |||||||||||||||| || || ||| ||| |||| || |||||||| |||| |||| Sbjct: 470 cacttttgtacatgttatcgatcacactctgatagtgtttaagcaactgaggcctcttct 411 Query: 273 ttttatatgttggagtgatcaagtcgcgttccatgtcaaacggcactgggtcaagatg 330 | ||||||||||||||||| | ||| |||||||| ||||| || |||||||||||||| Sbjct: 410 tcttatatgttggagtgataaggtcacgttccatatcaaatggaactgggtcaagatg 353 Score = 69.9 bits (35), Expect = 1e-08 Identities = 98/119 (82%) Strand = Plus / Minus Query: 503 gcaacaaggaatgactcgaaactatttccatatacccatatcgagtctatagcagaaaca 562 ||||||||||| | ||| ||||| ||||| || |||||||| || || |||| || ||| Sbjct: 180 gcaacaaggaaggcctcaaaactgtttccgtaaacccatatagattcaatagaaggaact 121 Query: 563 acaccgtaaatgttctccaaattttcaactgctacatattctccttgtgaaagcttgaa 621 ||| |||| ||||||| |||||||| || |||||||||||||||||||||||||| Sbjct: 120 tggccgaaaatattctccaggttttcaacggcaacatattctccttgtgaaagcttgaa 62
>dbj|AP004492.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT08D16, TM0025a, complete sequence Length = 51575 Score = 75.8 bits (38), Expect = 2e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 240 cctggtagtacttgagcaactggggccgcttccttttatatgttggagtgatcaagtcgc 299 |||| ||||| || ||||||||||| | |||| | ||||| ||||| ||||| | ||| Sbjct: 22982 cctgatagtatttaagcaactggggtctcttcttcttatacgttggtgtgataaggtcat 23041 Query: 300 gttccatgtcaaacggcactgggtcaagatgtacagctcttatcatttcaaaaccttt 357 ||||||||||||| || || ||||||||||| ||||||||||| | ||||||||||| Sbjct: 23042 gttccatgtcaaatggaaccgggtcaagatgaacagctcttataaactcaaaaccttt 23099 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 569 taaatgttctccaaattttcaactgctacatattctccttgtgaaagcttgaagatattc 628 ||||| ||||||| |||||||| || ||||||||||||||||||||||| || |||||| Sbjct: 24132 taaatattctccaggttttcaacagcaacatattctccttgtgaaagcttaaatatattc 24191 Query: 629 tt 630 || Sbjct: 24192 tt 24193
>gb|DQ174260.1| Gossypium hirsutum ACS-like protein (ACS2) mRNA, complete cds Length = 2296 Score = 73.8 bits (37), Expect = 6e-10 Identities = 136/169 (80%) Strand = Plus / Minus Query: 462 cagcccagctctcaagagcttccttgttaggattgactacggcaacaaggaatgactcga 521 ||||||||| ||||| |||| ||| || || || || || ||||||||| | ||||| | Sbjct: 1723 cagcccagcgttcaagtgcttgcttatttgggttaacaaccgcaacaaggtaggactcaa 1664 Query: 522 aactatttccatatacccatatcgagtctatagcagaaacaacaccgtaaatgttctcca 581 | || || ||||| ||||||||||| || ||| |||||||| ||| |||| ||||||| Sbjct: 1663 agctgttcccataaacccatatcgattcaatatcagaaacacaaccataaacattctcca 1604 Query: 582 aattttcaactgctacatattctccttgtgaaagcttgaagatattctt 630 || ||||| || |||||||| |||||||||||||| ||||| ||||| Sbjct: 1603 ggttctcaacagcaacatattccccttgtgaaagcttaaagatgttctt 1555 Score = 61.9 bits (31), Expect = 2e-06 Identities = 124/155 (80%) Strand = Plus / Minus Query: 218 ttgtacatgttgtcaattgcaccctggtagtacttgagcaactggggccgcttcctttta 277 |||||||||| ||| || ||| ||| || ||||||||||| || |||| ||| | ||| Sbjct: 1967 ttgtacatgtcgtcgatcacactctgataatacttgagcaattgaggccttttcttctta 1908 Query: 278 tatgttggagtgatcaagtcgcgttccatgtcaaacggcactgggtcaagatgtacagct 337 ||||||| |||| | |||||| ||||||||||| || || |||| ||||| |||||| Sbjct: 1907 aatgttggggtgagaaggtcgcggtccatgtcaaatggtacatggtcgagatggacagct 1848 Query: 338 cttatcatttcaaaacctttgagcttcttctcttt 372 |||| | |||||||||||| |||| |||||||| Sbjct: 1847 tttataaattcaaaacctttcagctgtttctcttt 1813
>ref|NM_192053.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1704 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 572 atgttctccaaattttcaactgctacatattctccttgtgaaagcttgaagatattcttt 631 |||||||||||||| || || || |||||||||||||| || ||||||||||| ||||| Sbjct: 1337 atgttctccaaattctccacagcgacatattctccttgggagagcttgaagatgttcttc 1278 Query: 632 ttgcggtctatgat 645 ||||| || ||||| Sbjct: 1277 ttgcgatcaatgat 1264 Score = 56.0 bits (28), Expect = 1e-04 Identities = 148/188 (78%) Strand = Plus / Minus Query: 241 ctggtagtacttgagcaactggggccgcttccttttatatgttggagtgatcaagtcgcg 300 |||||| || ||||||| ||| ||||||||| | || || ||||| || || | ||| || Sbjct: 1668 ctggtaatatttgagcagctgtggccgcttcttcttgtaagttggggtaattaggtcacg 1609 Query: 301 ttccatgtcaaacggcactgggtcaagatgtacagctcttatcatttcaaaacctttgag 360 ||||| || || |||||||| || ||||| ||||| || || | ||||| |||||||| Sbjct: 1608 atccatatcgaatggcactggctccagatgaacagccctgatgagctcaaagcctttgag 1549 Query: 361 cttcttctcttttcctgtttttgaaagttcacccaaaatatattcttttgctttcggatt 420 |||||| ||||| || || || | | ||| ||||| ||| ||||||||||||| |||| Sbjct: 1548 cttcttttctttaccagtcttggttaattctcccaagataaattcttttgctttaggatc 1489 Query: 421 ctcacaca 428 ||||||| Sbjct: 1488 ttcacaca 1481
>ref|XM_760947.1| Theileria parva strain Muguga chromosome 1 long-chain fatty acid CoA ligase (TP01_0520) partial mRNA Length = 2266 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 598 atattctccttgtgaaagcttgaagatattcttt 631 |||||||||||||||||||||||||||||||||| Sbjct: 1855 atattctccttgtgaaagcttgaagatattcttt 1822
>gb|AC142526.5| Medicago truncatula clone mth2-34h20, complete sequence Length = 113622 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 569 taaatgttctccaaattttcaactgctacatattctccttgtgaaagcttgaagatattc 628 ||||| ||||||| |||||||| || |||||||||||||| ||||||||||| |||||| Sbjct: 113360 taaatattctccaggttttcaacggcaacatattctccttgggaaagcttgaatatattc 113301 Query: 629 tt 630 || Sbjct: 113300 tt 113299
>dbj|AP004363.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0019E03 Length = 152092 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 572 atgttctccaaattttcaactgctacatattctccttgtgaaagcttgaagatattcttt 631 |||||||||||||| || || || |||||||||||||| || ||||||||||| ||||| Sbjct: 71233 atgttctccaaattctccacagcgacatattctccttgggagagcttgaagatgttcttc 71292 Query: 632 ttgcggtctatgat 645 ||||| || ||||| Sbjct: 71293 ttgcgatcaatgat 71306
>dbj|AK101149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027A14, full insert sequence Length = 2372 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 572 atgttctccaaattttcaactgctacatattctccttgtgaaagcttgaagatattcttt 631 |||||||||||||| || || || |||||||||||||| || ||||||||||| ||||| Sbjct: 1705 atgttctccaaattctccacagcgacatattctccttgggagagcttgaagatgttcttc 1646 Query: 632 ttgcggtctatgat 645 ||||| || ||||| Sbjct: 1645 ttgcgatcaatgat 1632 Score = 48.1 bits (24), Expect = 0.036 Identities = 147/188 (78%) Strand = Plus / Minus Query: 241 ctggtagtacttgagcaactggggccgcttccttttatatgttggagtgatcaagtcgcg 300 |||||| || ||||||| ||| ||||||||| | || || ||||| || || | ||| || Sbjct: 2036 ctggtaatatttgagcagctgtggccgcttcttcttgtaagttggggtaattaggtcacg 1977 Query: 301 ttccatgtcaaacggcactgggtcaagatgtacagctcttatcatttcaaaacctttgag 360 ||||| || || |||||||| || ||||| ||||| || || | ||||| ||||||| Sbjct: 1976 atccatatcgaatggcactggctccagatgaacagccctgatgagctcaaagcctttgaa 1917 Query: 361 cttcttctcttttcctgtttttgaaagttcacccaaaatatattcttttgctttcggatt 420 |||||| ||||| || || || | | ||| ||||| ||| ||||||||||||| |||| Sbjct: 1916 cttcttttctttaccagtcttggttaattctcccaagataaattcttttgctttaggatc 1857 Query: 421 ctcacaca 428 ||||||| Sbjct: 1856 ttcacaca 1849
>dbj|AK066286.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065D12, full insert sequence Length = 2544 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 572 atgttctccaaattttcaactgctacatattctccttgtgaaagcttgaagatattcttt 631 |||||||||||||| || || || |||||||||||||| || ||||||||||| ||||| Sbjct: 1802 atgttctccaaattctccacagcgacatattctccttgggagagcttgaagatgttcttc 1743 Query: 632 ttgcggtctatgat 645 ||||| || ||||| Sbjct: 1742 ttgcgatcaatgat 1729 Score = 56.0 bits (28), Expect = 1e-04 Identities = 148/188 (78%) Strand = Plus / Minus Query: 241 ctggtagtacttgagcaactggggccgcttccttttatatgttggagtgatcaagtcgcg 300 |||||| || ||||||| ||| ||||||||| | || || ||||| || || | ||| || Sbjct: 2133 ctggtaatatttgagcagctgtggccgcttcttcttgtaagttggggtaattaggtcacg 2074 Query: 301 ttccatgtcaaacggcactgggtcaagatgtacagctcttatcatttcaaaacctttgag 360 ||||| || || |||||||| || ||||| ||||| || || | ||||| |||||||| Sbjct: 2073 atccatatcgaatggcactggctccagatgaacagccctgatgagctcaaagcctttgag 2014 Query: 361 cttcttctcttttcctgtttttgaaagttcacccaaaatatattcttttgctttcggatt 420 |||||| ||||| || || || | | ||| ||||| ||| ||||||||||||| |||| Sbjct: 2013 cttcttttctttaccagtcttggttaattctcccaagataaattcttttgctttaggatc 1954 Query: 421 ctcacaca 428 ||||||| Sbjct: 1953 ttcacaca 1946
>emb|X94624.1|BNACS7 B.napus mRNA for acyl-CoA synthetase (2360 bp) Length = 2360 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 296 tcgcgttccatgtcaaacggcactgggtcaagatg 330 ||||||||||||||||||||||||||||| ||||| Sbjct: 1967 tcgcgttccatgtcaaacggcactgggtctagatg 1933
>ref|NM_117173.1| Arabidopsis thaliana catalytic AT4G11030 mRNA, complete cds Length = 2001 Score = 58.0 bits (29), Expect = 4e-05 Identities = 110/137 (80%) Strand = Plus / Minus Query: 245 tagtacttgagcaactggggccgcttccttttatatgttggagtgatcaagtcgcgttcc 304 ||||| |||||||| || |||| |||| |||| || |||||||| | | ||| |||||| Sbjct: 1940 tagtatttgagcaattgaggcctcttctttttgtaggttggagtaagaaggtctcgttcc 1881 Query: 305 atgtcaaacggcactgggtcaagatgtacagctcttatcatttcaaaacctttgagcttc 364 ||||| |||| |||||| || ||||| ||| || |||| || |||||||| || | ||| Sbjct: 1880 atgtcgaacgccactggttccagatgaacatcttttatgatctcaaaacccttcaacttg 1821 Query: 365 ttctcttttcctgtttt 381 |||||||| ||||||| Sbjct: 1820 ttctctttggctgtttt 1804 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 506 acaaggaatgactcgaaactatttccatatacccatatcga 546 |||||||| ||||| || || |||||||||||||||||||| Sbjct: 1679 acaaggaaggactcaaagctgtttccatatacccatatcga 1639
>ref|NM_185587.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1974 Score = 58.0 bits (29), Expect = 4e-05 Identities = 101/125 (80%) Strand = Plus / Minus Query: 503 gcaacaaggaatgactcgaaactatttccatatacccatatcgagtctatagcagaaaca 562 ||||||||||| || || ||||||||||| || | ||||||||| ||||| | | | Sbjct: 1676 gcaacaaggaaagattcaaaactatttccgtaaatccatatcgaatctatctcttggaga 1617 Query: 563 acaccgtaaatgttctccaaattttcaactgctacatattctccttgtgaaagcttgaag 622 || ||||| | ||||| | |||||| ||||| ||||||||||| |||||||||||||| Sbjct: 1616 accccgtacacattctcgagattttctactgcaacatattctccctgtgaaagcttgaat 1557 Query: 623 atatt 627 ||||| Sbjct: 1556 atatt 1552 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 302 tccatgtcaaacggcactgggtcaagatgtacagctcttat 342 ||||| ||||| || | |||||||||||||||||||||||| Sbjct: 1877 tccatatcaaatggtaatgggtcaagatgtacagctcttat 1837
>gb|AF503755.1| Arabidopsis thaliana long chain acyl-CoA synthetase 5 (LACS5) mRNA, complete cds Length = 2001 Score = 58.0 bits (29), Expect = 4e-05 Identities = 110/137 (80%) Strand = Plus / Minus Query: 245 tagtacttgagcaactggggccgcttccttttatatgttggagtgatcaagtcgcgttcc 304 ||||| |||||||| || |||| |||| |||| || |||||||| | | ||| |||||| Sbjct: 1940 tagtatttgagcaattgaggcctcttctttttgtaggttggagtaagaaggtctcgttcc 1881 Query: 305 atgtcaaacggcactgggtcaagatgtacagctcttatcatttcaaaacctttgagcttc 364 ||||| |||| |||||| || ||||| ||| || |||| || |||||||| || | ||| Sbjct: 1880 atgtcgaacgccactggttccagatgaacatcttttatgatctcaaaacccttcaacttg 1821 Query: 365 ttctcttttcctgtttt 381 |||||||| ||||||| Sbjct: 1820 ttctctttggctgtttt 1804 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 506 acaaggaatgactcgaaactatttccatatacccatatcga 546 |||||||| ||||| || || |||||||||||||||||||| Sbjct: 1679 acaaggaaggactcaaagctgtttccatatacccatatcga 1639
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 583 attttcaactgctacatattctccttgtgaaagcttgaagatatt 627 |||||| ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 2955432 attttctactgcaacatattctccctgtgaaagcttgaatatatt 2955388 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 302 tccatgtcaaacggcactgggtcaagatgtacagctcttat 342 ||||| ||||| || | |||||||||||||||||||||||| Sbjct: 2956389 tccatatcaaatggtaatgggtcaagatgtacagctcttat 2956349
>dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046E09 Length = 146776 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 583 attttcaactgctacatattctccttgtgaaagcttgaagatatt 627 |||||| ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 115578 attttctactgcaacatattctccctgtgaaagcttgaatatatt 115534 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 302 tccatgtcaaacggcactgggtcaagatgtacagctcttat 342 ||||| ||||| || | |||||||||||||||||||||||| Sbjct: 116535 tccatatcaaatggtaatgggtcaagatgtacagctcttat 116495
>dbj|AP005828.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0702F05 Length = 145018 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 583 attttcaactgctacatattctccttgtgaaagcttgaagatatt 627 |||||| ||||| ||||||||||| |||||||||||||| ||||| Sbjct: 43381 attttctactgcaacatattctccctgtgaaagcttgaatatatt 43337 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 302 tccatgtcaaacggcactgggtcaagatgtacagctcttat 342 ||||| ||||| || | |||||||||||||||||||||||| Sbjct: 44338 tccatatcaaatggtaatgggtcaagatgtacagctcttat 44298
>dbj|AK063337.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-A08, full insert sequence Length = 2173 Score = 58.0 bits (29), Expect = 4e-05 Identities = 101/125 (80%) Strand = Plus / Minus Query: 503 gcaacaaggaatgactcgaaactatttccatatacccatatcgagtctatagcagaaaca 562 ||||||||||| || || ||||||||||| || | ||||||||| ||||| | | | Sbjct: 1662 gcaacaaggaaagattcaaaactatttccgtaaatccatatcgaatctatctcttggaga 1603 Query: 563 acaccgtaaatgttctccaaattttcaactgctacatattctccttgtgaaagcttgaag 622 || ||||| | ||||| | |||||| ||||| ||||||||||| |||||||||||||| Sbjct: 1602 accccgtacacattctcgagattttctactgcaacatattctccctgtgaaagcttgaat 1543 Query: 623 atatt 627 ||||| Sbjct: 1542 atatt 1538 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 302 tccatgtcaaacggcactgggtcaagatgtacagctcttat 342 ||||| ||||| || | |||||||||||||||||||||||| Sbjct: 1863 tccatatcaaatggtaatgggtcaagatgtacagctcttat 1823
>ref|NM_118516.2| Arabidopsis thaliana catalytic AT4G23850 mRNA, complete cds Length = 2324 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 299 cgttccatgtcaaacggcactgggtcaagatg 330 |||||||||||||| ||||||||||||||||| Sbjct: 1956 cgttccatgtcaaatggcactgggtcaagatg 1925
>emb|AL161560.2|ATCHRIV60 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 60 Length = 196677 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 299 cgttccatgtcaaacggcactgggtcaagatg 330 |||||||||||||| ||||||||||||||||| Sbjct: 63307 cgttccatgtcaaatggcactgggtcaagatg 63338
>emb|AL078468.1|ATT32A16 Arabidopsis thaliana DNA chromosome 4, BAC clone T32A16 (ESSA project) Length = 89826 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 299 cgttccatgtcaaacggcactgggtcaagatg 330 |||||||||||||| ||||||||||||||||| Sbjct: 13401 cgttccatgtcaaatggcactgggtcaagatg 13432
>gb|AF503754.1| Arabidopsis thaliana long chain acyl-CoA synthetase 4 (LACS4) mRNA, complete cds Length = 2001 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 299 cgttccatgtcaaacggcactgggtcaagatg 330 |||||||||||||| ||||||||||||||||| Sbjct: 1886 cgttccatgtcaaatggcactgggtcaagatg 1855
>gb|AY049239.1| Arabidopsis thaliana AT4g23850/T32A16_20 mRNA, complete cds Length = 2273 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 299 cgttccatgtcaaacggcactgggtcaagatg 330 |||||||||||||| ||||||||||||||||| Sbjct: 1909 cgttccatgtcaaatggcactgggtcaagatg 1878
>ref|NM_105115.3| Arabidopsis thaliana catalytic AT1G64400 mRNA, complete cds Length = 2304 Score = 54.0 bits (27), Expect = 6e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 527 tttccatatacccatatcgagtctatagcagaaacaacaccgtaaatgttctccaaattt 586 |||||||||||||||||||| || || || | ||| || ||| ||||||||||| || Sbjct: 1760 tttccatatacccatatcgattcaatggcggcgacatgactgtatatgttctccaagttc 1701 Query: 587 tcaactgctacatattctccttgtgaaagcttgaagatattctttttgcggtctatgat 645 ||||| || || ||||||||||| || || || ||||| ||||| || ||||| ||||| Sbjct: 1700 tcaacggcaacgtattctccttgagacagtttaaagatgttcttcttacggtcgatgat 1642
>ref|XM_660093.1| Cryptosporidium hominis TU502 long-chain fatty acid CoA ligase (Chro.50052) partial mRNA Length = 2052 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 593 gctacatattctccttgtgaaagcttgaagatattcttt 631 |||||||| |||||||| ||||||||||| ||||||||| Sbjct: 1637 gctacatactctccttgagaaagcttgaatatattcttt 1599
>gb|AY079314.1| Arabidopsis thaliana putative acyl-CoA synthetase (At1g64400) mRNA, complete cds Length = 2029 Score = 54.0 bits (27), Expect = 6e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 527 tttccatatacccatatcgagtctatagcagaaacaacaccgtaaatgttctccaaattt 586 |||||||||||||||||||| || || || | ||| || ||| ||||||||||| || Sbjct: 1658 tttccatatacccatatcgattcaatggcggcgacatgactgtatatgttctccaagttc 1599 Query: 587 tcaactgctacatattctccttgtgaaagcttgaagatattctttttgcggtctatgat 645 ||||| || || ||||||||||| || || || ||||| ||||| || ||||| ||||| Sbjct: 1598 tcaacggcaacgtattctccttgagacagtttaaagatgttcttcttacggtcgatgat 1540
>gb|AY039935.1| Arabidopsis thaliana putative acyl-CoA synthetase (At1g64400) mRNA, complete cds Length = 2297 Score = 54.0 bits (27), Expect = 6e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 527 tttccatatacccatatcgagtctatagcagaaacaacaccgtaaatgttctccaaattt 586 |||||||||||||||||||| || || || | ||| || ||| ||||||||||| || Sbjct: 1734 tttccatatacccatatcgattcaatggcggcgacatgactgtatatgttctccaagttc 1675 Query: 587 tcaactgctacatattctccttgtgaaagcttgaagatattctttttgcggtctatgat 645 ||||| || || ||||||||||| || || || ||||| ||||| || ||||| ||||| Sbjct: 1674 tcaacggcaacgtattctccttgagacagtttaaagatgttcttcttacggtcgatgat 1616
>emb|AL161518.2|ATCHRIV30 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 30 Length = 198136 Score = 54.0 bits (27), Expect = 6e-04 Identities = 93/115 (80%) Strand = Plus / Minus Query: 240 cctggtagtacttgagcaactggggccgcttccttttatatgttggagtgatcaagtcgc 299 |||| ||||| |||||||| || |||| |||| |||| || |||||||| | | ||| | Sbjct: 179465 cctgatagtatttgagcaattgaggcctcttctttttgtaggttggagtaagaaggtctc 179406 Query: 300 gttccatgtcaaacggcactgggtcaagatgtacagctcttatcatttcaaaacc 354 |||||||||| |||| |||||| || ||||| ||| || |||| || |||||||| Sbjct: 179405 gttccatgtcgaacgccactggttccagatgaacatcttttatgatctcaaaacc 179351 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Minus Query: 506 acaaggaatgactcgaaactatttccatatacccatatc 544 |||||||| ||||| || || |||||||||||||||||| Sbjct: 179127 acaaggaaggactcaaagctgtttccatatacccatatc 179089
>emb|AL049876.1|ATT22B4 Arabidopsis thaliana DNA chromosome 4, BAC clone T22B4 (ESSA project) Length = 108598 Score = 54.0 bits (27), Expect = 6e-04 Identities = 93/115 (80%) Strand = Plus / Minus Query: 240 cctggtagtacttgagcaactggggccgcttccttttatatgttggagtgatcaagtcgc 299 |||| ||||| |||||||| || |||| |||| |||| || |||||||| | | ||| | Sbjct: 13862 cctgatagtatttgagcaattgaggcctcttctttttgtaggttggagtaagaaggtctc 13803 Query: 300 gttccatgtcaaacggcactgggtcaagatgtacagctcttatcatttcaaaacc 354 |||||||||| |||| |||||| || ||||| ||| || |||| || |||||||| Sbjct: 13802 gttccatgtcgaacgccactggttccagatgaacatcttttatgatctcaaaacc 13748 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Minus Query: 506 acaaggaatgactcgaaactatttccatatacccatatc 544 |||||||| ||||| || || |||||||||||||||||| Sbjct: 13524 acaaggaaggactcaaagctgtttccatatacccatatc 13486
>gb|AF503753.1| Arabidopsis thaliana long chain acyl-CoA synthetase 3 (LACS3) mRNA, complete cds Length = 1998 Score = 54.0 bits (27), Expect = 6e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 527 tttccatatacccatatcgagtctatagcagaaacaacaccgtaaatgttctccaaattt 586 |||||||||||||||||||| || || || | ||| || ||| ||||||||||| || Sbjct: 1658 tttccatatacccatatcgattcaatggcggcgacatgactgtatatgttctccaagttc 1599 Query: 587 tcaactgctacatattctccttgtgaaagcttgaagatattctttttgcggtctatgat 645 ||||| || || ||||||||||| || || || ||||| ||||| || ||||| ||||| Sbjct: 1598 tcaacggcaacgtattctccttgagacagtttaaagatgttcttcttacggtcgatgat 1540
>ref|XM_626248.1| Cryptosporidium parvum Iowa II putative acyl-CoA synthetase (cgd5_3200), partial mRNA Length = 2052 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 593 gctacatattctccttgtgaaagcttgaagatattcttt 631 |||||||| |||||||| ||||||||||| ||||||||| Sbjct: 1637 gctacatactctccttgagaaagcttgaatatattcttt 1599
>emb|BX817150.1|CNS0AARU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH8ZA02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2290 Score = 54.0 bits (27), Expect = 6e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 527 tttccatatacccatatcgagtctatagcagaaacaacaccgtaaatgttctccaaattt 586 |||||||||||||||||||| || || || | ||| || ||| ||||||||||| || Sbjct: 1760 tttccatatacccatatcgattcaatggcggcgacatgactgtatatgttctccaagttc 1701 Query: 587 tcaactgctacatattctccttgtgaaagcttgaagatattctttttgcggtctatgat 645 ||||| || || ||||||||||| || || || ||||| ||||| || ||||| ||||| Sbjct: 1700 tcaacggcaacgtattctccttgagacagtttaaagatgttcttcttacggtcgatgat 1642
>gb|AF080118.1|F8M12 Arabidopsis thaliana BAC F8M12 Length = 103673 Score = 54.0 bits (27), Expect = 6e-04 Identities = 93/115 (80%) Strand = Plus / Plus Query: 240 cctggtagtacttgagcaactggggccgcttccttttatatgttggagtgatcaagtcgc 299 |||| ||||| |||||||| || |||| |||| |||| || |||||||| | | ||| | Sbjct: 5284 cctgatagtatttgagcaattgaggcctcttctttttgtaggttggagtaagaaggtctc 5343 Query: 300 gttccatgtcaaacggcactgggtcaagatgtacagctcttatcatttcaaaacc 354 |||||||||| |||| |||||| || ||||| ||| || |||| || |||||||| Sbjct: 5344 gttccatgtcgaacgccactggttccagatgaacatcttttatgatctcaaaacc 5398 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 506 acaaggaatgactcgaaactatttccatatacccatatc 544 |||||||| ||||| || || |||||||||||||||||| Sbjct: 5622 acaaggaaggactcaaagctgtttccatatacccatatc 5660
>gb|AY112544.1| Zea mays CL38764_1 mRNA sequence Length = 664 Score = 52.0 bits (26), Expect = 0.002 Identities = 57/68 (83%) Strand = Plus / Plus Query: 572 atgttctccaaattttcaactgctacatattctccttgtgaaagcttgaagatattcttt 631 |||||||||| ||| ||||| || || || ||||| ||||| ||||||||||| ||||| Sbjct: 590 atgttctccagattntcaaccgcaacgtactctccctgtgagagcttgaagatgttcttc 649 Query: 632 ttgcggtc 639 ||||||| Sbjct: 650 ntgcggtc 657
>ref|XM_949155.1| Theileria annulata strain Ankara long-chain-fatty-acid--CoA ligase 5 (TA20445) partial mRNA Length = 3105 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 598 atattctccttgtgaaagcttgaagatattctt 630 |||||||||||||||||| || ||||||||||| Sbjct: 1614 atattctccttgtgaaagtttaaagatattctt 1582
>gb|BT024042.1| Zea mays clone EL01N0430A08 mRNA sequence Length = 2024 Score = 46.1 bits (23), Expect = 0.14 Identities = 95/119 (79%) Strand = Plus / Plus Query: 254 agcaactggggccgcttccttttatatgttggagtgatcaagtcgcgttccatgtcaaac 313 |||| ||| ||||||||| | || || || || ||||| | |||||| |||||||| ||| Sbjct: 342 agcagctgtggccgcttcttcttgtacgtcggggtgataaggtcgcgctccatgtcgaac 401 Query: 314 ggcactgggtcaagatgtacagctcttatcatttcaaaacctttgagcttcttctcttt 372 || | ||||| ||||| ||||| || || | ||||| |||||||||||||| ||||| Sbjct: 402 ggtgcggggtccagatgaacagccctgatgagctcaaagcctttgagcttcttttcttt 460
>ref|XM_645995.1| Entamoeba histolytica HM-1:IMSS acyl-CoA synthetase (183.t00002) partial mRNA Length = 1977 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 586 ttcaactgctacatattctccttgtg 611 ||||||||||| |||||||||||||| Sbjct: 1569 ttcaactgctatatattctccttgtg 1544
>emb|AL606624.4|OSJN00058 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011J08, complete sequence Length = 157734 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 355 tttgagcttcttctcttttcct 376 |||||||||||||||||||||| Sbjct: 952 tttgagcttcttctcttttcct 931
>emb|AL606639.3|OSJN00072 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020J04, complete sequence Length = 164567 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 355 tttgagcttcttctcttttcct 376 |||||||||||||||||||||| Sbjct: 158140 tttgagcttcttctcttttcct 158119
>gb|AC098719.3| Mus musculus clone RP23-2M3, complete sequence Length = 219626 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 395 aaaatatattcttttgctttcggatt 420 |||||||||||||||||||| ||||| Sbjct: 162304 aaaatatattcttttgctttaggatt 162329
>gb|AY648935.1| Parmotrema cetratum voucher H.S. Osorio 9425 small subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 851 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 362 ttcttctcttttcctgtttttg 383 |||||||||||||||||||||| Sbjct: 702 ttcttctcttttcctgtttttg 681
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 355 tttgagcttcttctcttttcct 376 |||||||||||||||||||||| Sbjct: 29091486 tttgagcttcttctcttttcct 29091465
>gb|AC066689.5|AC066689 Arabidopsis thaliana chromosome 1 BAC F15H21 genomic sequence, complete sequence Length = 96887 Score = 44.1 bits (22), Expect = 0.56 Identities = 61/74 (82%) Strand = Plus / Minus Query: 572 atgttctccaaattttcaactgctacatattctccttgtgaaagcttgaagatattcttt 631 ||||||||||| || ||||| || || ||||||||||| || || || ||||| ||||| Sbjct: 27157 atgttctccaagttctcaacggcaacgtattctccttgagacagtttaaagatgttcttc 27098 Query: 632 ttgcggtctatgat 645 || ||||| ||||| Sbjct: 27097 ttacggtcgatgat 27084
>emb|AL954869.9| Mouse DNA sequence from clone RP23-477I13 on chromosome X, complete sequence Length = 159365 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 361 cttcttctcttttcctgttttt 382 |||||||||||||||||||||| Sbjct: 106345 cttcttctcttttcctgttttt 106366
>gb|AC162944.4| Mus musculus BAC clone RP23-76L8 from chromosome 13, complete sequence Length = 155927 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 395 aaaatatattcttttgctttcggat 419 |||||||||||||||||||| |||| Sbjct: 102229 aaaatatattcttttgctttaggat 102205
>gb|AC131695.4| Mus musculus BAC clone RP23-396F8 from chromosome 6, complete sequence Length = 199679 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 611 gaaagcttgaagatattcttt 631 ||||||||||||||||||||| Sbjct: 73460 gaaagcttgaagatattcttt 73440
>ref|NM_017794.2| Homo sapiens KIAA1797 (KIAA1797), mRNA Length = 6117 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 607 ttgtgaaagcttgaagatatt 627 ||||||||||||||||||||| Sbjct: 6030 ttgtgaaagcttgaagatatt 6050
>gb|AC162934.6| Mus musculus BAC clone RP23-131P21 from chromosome 13, complete sequence Length = 223665 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 395 aaaatatattcttttgctttcggat 419 |||||||||||||||||||| |||| Sbjct: 19915 aaaatatattcttttgctttaggat 19891
>gb|BC001246.1| Homo sapiens KIAA1797, mRNA (cDNA clone IMAGE:3451523), partial cds Length = 1866 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 607 ttgtgaaagcttgaagatatt 627 ||||||||||||||||||||| Sbjct: 1771 ttgtgaaagcttgaagatatt 1791
>gb|AC113589.13| Mus musculus chromosome 9, clone RP23-257A19, complete sequence Length = 213826 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 399 tatattcttttgctttcggat 419 ||||||||||||||||||||| Sbjct: 186528 tatattcttttgctttcggat 186508
>ref|XM_739240.1| Plasmodium chabaudi chabaudi long-chain fatty acid CoA ligase, (PC000138.00.0) partial mRNA Length = 2052 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 584 ttttcaactgctacatattctccttgtga 612 ||||| |||||||||||||| |||||||| Sbjct: 1637 ttttctactgctacatattcaccttgtga 1609
>gb|BC114215.1| Homo sapiens protein tyrosine phosphatase-like A domain containing 2, mRNA (cDNA clone MGC:131700 IMAGE:5174279), complete cds Length = 2217 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 607 ttgtgaaagcttgaagatatt 627 ||||||||||||||||||||| Sbjct: 1548 ttgtgaaagcttgaagatatt 1528
>gb|AY139834.1| Homo sapiens hypothetical protein mRNA, complete cds Length = 6117 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 607 ttgtgaaagcttgaagatatt 627 ||||||||||||||||||||| Sbjct: 6030 ttgtgaaagcttgaagatatt 6050
>emb|AL662879.5|HS279F22 Homo sapiens chromosome 9 BAC RP11-279F22, complete sequence Length = 159300 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 607 ttgtgaaagcttgaagatatt 627 ||||||||||||||||||||| Sbjct: 80509 ttgtgaaagcttgaagatatt 80489
>emb|CR608016.1| full-length cDNA clone CS0DC008YE04 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1238 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 607 ttgtgaaagcttgaagatatt 627 ||||||||||||||||||||| Sbjct: 1191 ttgtgaaagcttgaagatatt 1211
>emb|CR607345.1| full-length cDNA clone CS0DF034YH21 of Fetal brain of Homo sapiens (human) Length = 1492 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 607 ttgtgaaagcttgaagatatt 627 ||||||||||||||||||||| Sbjct: 1445 ttgtgaaagcttgaagatatt 1465
>dbj|AK055116.1| Homo sapiens cDNA FLJ30554 fis, clone BRAWH2003693 Length = 3402 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 607 ttgtgaaagcttgaagatatt 627 ||||||||||||||||||||| Sbjct: 3339 ttgtgaaagcttgaagatatt 3359
>emb|BX546474.8| Zebrafish DNA sequence from clone DKEY-120L3 in linkage group 17, complete sequence Length = 179463 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 389 tcacccaaaatatattcttttgctt 413 |||| |||||||||||||||||||| Sbjct: 68996 tcactcaaaatatattcttttgctt 69020
>gb|AC023173.3| Mus musculus strain C57BL6/J chromosome 6 clone RP23-11G22, complete sequence Length = 203451 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 tcttttcctgtttttgaaagt 388 ||||||||||||||||||||| Sbjct: 83835 tcttttcctgtttttgaaagt 83815
>emb|BX005093.22| Zebrafish DNA sequence from clone CH211-210G13 in linkage group 3, complete sequence Length = 155392 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 394 caaaatatattcttttgcttt 414 ||||||||||||||||||||| Sbjct: 86478 caaaatatattcttttgcttt 86458
>gb|AC160964.1| Mus musculus BAC clone RP24-316G24 from chromosome 9, complete sequence Length = 158842 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 399 tatattcttttgctttcggat 419 ||||||||||||||||||||| Sbjct: 20272 tatattcttttgctttcggat 20252
>gb|AC154218.2| Mus musculus BAC clone RP24-357N6 from chromosome 17, complete sequence Length = 122710 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 395 aaaatatattcttttgctttcggat 419 |||||||||||||||||||| |||| Sbjct: 56862 aaaatatattcttttgctttaggat 56838
>gb|AC007680.2| Homo sapiens BAC clone RP11-354L14 from 2, complete sequence Length = 146333 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 569 taaatgttctccaaattttca 589 ||||||||||||||||||||| Sbjct: 71260 taaatgttctccaaattttca 71240
>dbj|AK172818.1| Homo sapiens cDNA FLJ23979 fis, clone HEP20813 Length = 2680 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 607 ttgtgaaagcttgaagatatt 627 ||||||||||||||||||||| Sbjct: 2590 ttgtgaaagcttgaagatatt 2610
>dbj|AK000382.1| Homo sapiens cDNA FLJ20375 fis, clone HUV00942 Length = 1828 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 607 ttgtgaaagcttgaagatatt 627 ||||||||||||||||||||| Sbjct: 1753 ttgtgaaagcttgaagatatt 1773
>emb|BX548055.7| Zebrafish DNA sequence from clone CH211-246K22 in linkage group 20, complete sequence Length = 105935 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 tcttttcctgtttttgaaagt 388 ||||||||||||||||||||| Sbjct: 31194 tcttttcctgtttttgaaagt 31214
>emb|BX255937.13| Zebrafish DNA sequence from clone CH211-191D7 in linkage group 20, complete sequence Length = 165726 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 tcttttcctgtttttgaaagt 388 ||||||||||||||||||||| Sbjct: 32215 tcttttcctgtttttgaaagt 32195
>emb|AL512738.1|HSM802875 Homo sapiens mRNA; cDNA DKFZp667H183 (from clone DKFZp667H183) Length = 654 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 607 ttgtgaaagcttgaagatatt 627 ||||||||||||||||||||| Sbjct: 575 ttgtgaaagcttgaagatatt 595
>dbj|AB058700.1| Homo sapiens mRNA for KIAA1797 protein, partial cds Length = 4195 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 607 ttgtgaaagcttgaagatatt 627 ||||||||||||||||||||| Sbjct: 4137 ttgtgaaagcttgaagatatt 4157
>gb|AC136372.13| Mus musculus chromosome 15, clone RP23-232G24, complete sequence Length = 201204 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 318 ctgggtcaagatgtacagctctta 341 ||||||||||||| |||||||||| Sbjct: 124397 ctgggtcaagatgcacagctctta 124374
>ref|NM_122773.1| Arabidopsis thaliana DNA binding AT5G28890 mRNA, complete cds Length = 699 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 aaagagcattacatcattct 94 |||||||||||||||||||| Sbjct: 417 aaagagcattacatcattct 398
>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome Length = 2401520 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 aaaacctttgagcttcttct 368 |||||||||||||||||||| Sbjct: 793432 aaaacctttgagcttcttct 793413
>gb|AC111104.10| Mus musculus chromosome 3, clone RP23-187F18, complete sequence Length = 222158 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 tcttctcttttcctgttttt 382 |||||||||||||||||||| Sbjct: 29554 tcttctcttttcctgttttt 29535
>gb|AC118047.7| Mus musculus chromosome 3, clone RP24-219P20, complete sequence Length = 159930 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 tcttctcttttcctgttttt 382 |||||||||||||||||||| Sbjct: 137507 tcttctcttttcctgttttt 137488
>gb|AC138394.7| Mus musculus chromosome 3, clone RP23-333D8, complete sequence Length = 227600 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 tctccaaattttcaactgct 595 |||||||||||||||||||| Sbjct: 70275 tctccaaattttcaactgct 70294
>emb|BX323879.11| Zebrafish DNA sequence from clone DKEY-30L21 in linkage group 10, complete sequence Length = 243476 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 cttttcctgtttttgaaagt 388 |||||||||||||||||||| Sbjct: 22243 cttttcctgtttttgaaagt 22224
>emb|AJ884590.1| Sporisorium reilianum panC gene (partial), lba1 gene (partial), pra3 gene, rba3 gene, mfa3.1 gene and mfa3.2 gene Length = 10028 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 cttctcttttcctgtttttg 383 |||||||||||||||||||| Sbjct: 3750 cttctcttttcctgtttttg 3769
>gb|AC124729.4| Mus musculus BAC clone RP23-479H9 from chromosome 14, complete sequence Length = 176086 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ttcacccaaaatatattctt 407 |||||||||||||||||||| Sbjct: 94195 ttcacccaaaatatattctt 94214
>gb|AC125216.3| Mus musculus BAC clone RP23-109J14 from 1, complete sequence Length = 218169 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 ttcttctcttttcctgtttt 381 |||||||||||||||||||| Sbjct: 182897 ttcttctcttttcctgtttt 182916
>emb|AL732579.5| Human DNA sequence from clone RP11-274K13 on chromosome X Contains the 5'end of a novel gene (LOC93380), a novel gene, the SLC9A6 gene for solute carrier family 9 (sodium/hydrogen exchanger, isoform 6), a glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene (LOC139543), an E2F transcription factor 6 (E2F6) pseudogene (LOC139542) and two CpG islands, complete sequence Length = 151432 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 tcttttcctgtttttgaaag 387 |||||||||||||||||||| Sbjct: 108752 tcttttcctgtttttgaaag 108733
>emb|AL132794.25|HSJ343I24 Human DNA sequence from clone RP3-343I24 on chromosome 6q13-14.1, complete sequence Length = 114728 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 acctttgagcttcttctctt 371 |||||||||||||||||||| Sbjct: 72410 acctttgagcttcttctctt 72391
>emb|AL929354.1|PFA929354 Plasmodium falciparum strain 3D7, chromosome 5, segment 4/4 Length = 340552 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 584 ttttcaactgctacatattctccttgtg 611 ||||| || ||||||||||||||||||| Sbjct: 40380 ttttctacagctacatattctccttgtg 40353
>emb|AL732293.14| Mouse DNA sequence from clone RP23-360J13 on chromosome 11, complete sequence Length = 117779 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 gaatcttgattttacttgttctag 198 ||||||||||||| |||||||||| Sbjct: 18040 gaatcttgatttttcttgttctag 18017
>gb|AC100814.2| Homo sapiens chromosome 8, clone CTD-3025N20, complete sequence Length = 169537 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 tgagcttcttctcttttcct 376 |||||||||||||||||||| Sbjct: 113632 tgagcttcttctcttttcct 113651
>gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome Length = 2225959 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 tctcttttcctgtttttgaa 385 |||||||||||||||||||| Sbjct: 678017 tctcttttcctgtttttgaa 678036
>gb|AC084826.4| Genomic sequence for Mus musculus, clone RP23-146L6, complete sequence Length = 196947 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 201 gagctcatttagcacttttgtaca 224 |||||||||| ||||||||||||| Sbjct: 110957 gagctcatttggcacttttgtaca 110934
>emb|BX530069.10| Zebrafish DNA sequence from clone DKEY-22L17 in linkage group 10, complete sequence Length = 222308 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 cttttcctgtttttgaaagt 388 |||||||||||||||||||| Sbjct: 17168 cttttcctgtttttgaaagt 17187
>gb|AC018976.7| Homo sapiens chromosome 10 clone RP11-384N23, complete sequence Length = 187260 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 ttgaatttggtacttctgtc 157 |||||||||||||||||||| Sbjct: 2961 ttgaatttggtacttctgtc 2942
>gb|AC104985.3| Homo sapiens chromosome 18, clone RP11-379L18, complete sequence Length = 172187 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 aagttcacccaaaatatatt 404 |||||||||||||||||||| Sbjct: 54112 aagttcacccaaaatatatt 54131
>gb|AC090531.18| Homo sapiens 12q BAC RP11-413B19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 204468 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 cattgcccatttgccacata 56 |||||||||||||||||||| Sbjct: 154243 cattgcccatttgccacata 154224
>gb|AC092643.2| Homo sapiens BAC clone RP11-393P9 from 4, complete sequence Length = 151902 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 359 agcttcttctcttttcctgttttt 382 |||||||||| ||||||||||||| Sbjct: 106060 agcttcttcttttttcctgttttt 106083
>gb|AF396952.1|AF396952 Gallus gallus transcriptional coactivator p100 mRNA, partial cds Length = 2151 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 attgactacggcaacaagga 512 |||||||||||||||||||| Sbjct: 1702 attgactacggcaacaagga 1721
>gb|AC018757.6| Homo sapiens chromosome 5 clone CTB-45J8, complete sequence Length = 186418 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 596 acatattctccttgtgaaag 615 |||||||||||||||||||| Sbjct: 134431 acatattctccttgtgaaag 134412
>gb|AY639600.1| Lycopersicon pimpinellifolium orion Hcr9 gene cluster, complete sequence Length = 28951 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 575 ttctccaaattttcaactgctaca 598 |||||||| ||||||||||||||| Sbjct: 13892 ttctccaacttttcaactgctaca 13869
>dbj|AK048112.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130035H06 product:unclassifiable, full insert sequence Length = 3632 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 agctctcaagagcttccttg 487 |||||||||||||||||||| Sbjct: 505 agctctcaagagcttccttg 486
>gb|BC066814.1| Mus musculus KH domain containing, RNA binding, signal transduction associated 2, mRNA (cDNA clone IMAGE:30102004), partial cds Length = 5277 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 ttcttctcttttcctgtttt 381 |||||||||||||||||||| Sbjct: 3290 ttcttctcttttcctgtttt 3271
>gb|AC018698.5|AC018698 Homo sapiens BAC clone RP11-579C11 from 12, complete sequence Length = 204713 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 cattgcccatttgccacata 56 |||||||||||||||||||| Sbjct: 17077 cattgcccatttgccacata 17058
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 cccaaaatatattcttttgc 411 |||||||||||||||||||| Sbjct: 11620320 cccaaaatatattcttttgc 11620301
>gb|AC008625.5|AC008625 Homo sapiens chromosome 5 clone CTB-157D17, complete sequence Length = 137592 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 596 acatattctccttgtgaaag 615 |||||||||||||||||||| Sbjct: 98863 acatattctccttgtgaaag 98882
>gb|AC008675.5|AC008675 Homo sapiens chromosome 5 clone CTB-45I8, complete sequence Length = 186415 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 596 acatattctccttgtgaaag 615 |||||||||||||||||||| Sbjct: 51988 acatattctccttgtgaaag 52007
>gb|AC018891.9| Homo sapiens BAC clone RP11-498M11 from 2, complete sequence Length = 174074 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 caaaatatattcttttgctt 413 |||||||||||||||||||| Sbjct: 100196 caaaatatattcttttgctt 100177
>gb|AF272706.1|F7P1 Arabidopsis thaliana BAC F7P1 Length = 110714 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 aaagagcattacatcattct 94 |||||||||||||||||||| Sbjct: 60570 aaagagcattacatcattct 60589
>dbj|AP004694.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0467G09 Length = 158204 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 cccaaaatatattcttttgc 411 |||||||||||||||||||| Sbjct: 80591 cccaaaatatattcttttgc 80572
>dbj|AK110305.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-164-A10, full insert sequence Length = 2740 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 616 cttgaagatattctttttgcggtc 639 ||||||||| |||||||||||||| Sbjct: 1906 cttgaagatgttctttttgcggtc 1883
>emb|AL929569.13| Mouse DNA sequence from clone RP23-325I3 on chromosome 2, complete sequence Length = 166963 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 ttcttctcttttcctgtttt 381 |||||||||||||||||||| Sbjct: 165341 ttcttctcttttcctgtttt 165322
>gb|AC148877.2| Chlamydomonas reinhardtii clone cr-11B1, complete sequence Length = 52591 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 614 agcttgaagatattctttttgcggtctatgat 645 ||||||||||| ||||| |||||||| ||||| Sbjct: 10135 agcttgaagatgttcttcttgcggtcaatgat 10166
>gb|DQ273260.1| Lycopersicon hirsutum endogenous virus LycEPRV_Lh5, complete sequence Length = 6553 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 tgattttacttgttctagac 200 |||||||||||||||||||| Sbjct: 1474 tgattttacttgttctagac 1455
>gb|AC155882.2| Medicago truncatula chromosome 7 BAC clone mte1-6p16, complete sequence Length = 113536 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 ttcttctcttttcctgtttt 381 |||||||||||||||||||| Sbjct: 103241 ttcttctcttttcctgtttt 103260
>emb|AL929571.10| Mouse DNA sequence from clone RP23-313G3 on chromosome 2, complete sequence Length = 88123 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 ttcttctcttttcctgtttt 381 |||||||||||||||||||| Sbjct: 378 ttcttctcttttcctgtttt 359
>gb|AC166064.4| Mus musculus BAC clone RP23-52K8 from chromosome 17, complete sequence Length = 245671 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 201 gagctcatttagcacttttgtaca 224 |||||||||| ||||||||||||| Sbjct: 146594 gagctcatttggcacttttgtaca 146617
>emb|AL591512.11| Mouse DNA sequence from clone RP23-346D16 on chromosome 2, complete sequence Length = 190549 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 agctctcaagagcttccttg 487 |||||||||||||||||||| Sbjct: 60530 agctctcaagagcttccttg 60511
>gb|AC172101.1| Medicago truncatula chromosome 7 BAC clone mth2-29f3, complete sequence Length = 88313 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 ttcttctcttttcctgtttt 381 |||||||||||||||||||| Sbjct: 9748 ttcttctcttttcctgtttt 9767
>gb|AC162441.11| Mus musculus chromosome 1, clone RP23-2E23, complete sequence Length = 225487 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 gcttcttctcttttcctgtt 379 |||||||||||||||||||| Sbjct: 128820 gcttcttctcttttcctgtt 128839 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,867,597 Number of Sequences: 3902068 Number of extensions: 6867597 Number of successful extensions: 157175 Number of sequences better than 10.0: 118 Number of HSP's better than 10.0 without gapping: 118 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 156660 Number of HSP's gapped (non-prelim): 506 length of query: 646 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 623 effective length of database: 17,143,297,704 effective search space: 10680274469592 effective search space used: 10680274469592 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)