ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags31b13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DNJ16_ARATH (Q8VXV4) Chaperone protein dnaJ 16 (Protein ARG1-LIK... 86 8e-17
2DNJ15_ARATH (Q9ZSY2) Chaperone protein dnaJ 15 (Protein ALTERED ... 56 7e-08
3DNJ39_ARATH (Q6XL73) Chaperone protein dnaJ 39 (Protein ARG1-LIK... 54 2e-07

>DNJ16_ARATH (Q8VXV4) Chaperone protein dnaJ 16 (Protein ARG1-LIKE1) (AtARL1)|
           (AtJ16) (AtDjB16)
          Length = 436

 Score = 85.5 bits (210), Expect = 8e-17
 Identities = 45/124 (36%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
 Frame = -3

Query: 518 FDSEYREVLAKFTEMTSRYAQEMQTIDELLNERNAIHASYTNSPTLKRXXX--XXXXXXX 345
           F++EYREVL +FT+MTSRYAQEMQ+IDELL +RN IH++YT  P +KR            
Sbjct: 314 FETEYREVLVQFTDMTSRYAQEMQSIDELLKQRNEIHSAYTTIPLMKRSSSKNRMRKSSF 373

Query: 344 XXXXXXXXXXSVRKDKKSKSPTTMEASASDXXXXXXXXXXXXXXXXXXRWFNIHHLKVDK 165
                     + +++++ +     E S+                    +WFN+ HLK+DK
Sbjct: 374 KKAAAKAPAPTEQEEEEEEEEEEEEESSRQKNKKPSTCDKSETLKKKSKWFNL-HLKLDK 432

Query: 164 RRPC 153
           ++PC
Sbjct: 433 KKPC 436



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>DNJ15_ARATH (Q9ZSY2) Chaperone protein dnaJ 15 (Protein ALTERED RESPONSE TO|
           GRAVITY) (AtARG1) (AtJ15) (AtDjB15)
          Length = 410

 Score = 55.8 bits (133), Expect = 7e-08
 Identities = 22/41 (53%), Positives = 35/41 (85%)
 Frame = -3

Query: 518 FDSEYREVLAKFTEMTSRYAQEMQTIDELLNERNAIHASYT 396
           F++EYR+ LA+F E+T+RY QE QT+DELL +R+ IH++++
Sbjct: 311 FETEYRKALARFQEVTNRYTQEKQTVDELLKQRDTIHSTFS 351



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>DNJ39_ARATH (Q6XL73) Chaperone protein dnaJ 39 (Protein ARG1-LIKE2) (AtARL2)|
           (AtJ39) (AtDjC39)
          Length = 414

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 27/50 (54%), Positives = 34/50 (68%)
 Frame = -3

Query: 524 LNFDSEYREVLAKFTEMTSRYAQEMQTIDELLNERNAIHASYTNSPTLKR 375
           L F++EY EV A+FTEM S+   E+Q IDELL  RN I A+YT  P  K+
Sbjct: 315 LKFEAEYHEVFAQFTEMASKCTGEVQEIDELLKRRNEICAAYTIFPPTKQ 364


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,320,301
Number of Sequences: 219361
Number of extensions: 1157521
Number of successful extensions: 2858
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2857
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4085413911
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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