| Clone Name | rbags31b11 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK120584.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013136I05, full insert sequence Length = 1373 Score = 468 bits (236), Expect = e-128 Identities = 395/448 (88%) Strand = Plus / Minus Query: 182 ttgtactcatgaacacgaatccactttgtagatgaccatttgtcaccttttatcactgga 241 ||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 1052 ttgtactcatgaacacgcatccactttgtcgatgaccatttgttaccttttatcactgga 993 Query: 242 catccaccatggaggcttgtgggatccagggttccatcaggcctcatgctccagaaaagt 301 ||||||||||| |||||||||| ||||| | |||||||||||||||||||||||||| Sbjct: 992 catccaccatgaaggcttgtggcatccaaagacccatcaggcctcatgctccagaaaagc 933 Query: 302 aatgcatctcccatcttcggtttgacagatataccccgttttgcacattcagacagctca 361 || |||||||||||||| |||||||||| | |||| || |||||||||||||||||| Sbjct: 932 aaagcatctcccatcttgggtttgacagccaaacccttcttagcacattcagacagctca 873 Query: 362 ttataaaatggtattgagctgctattaactttagcagaaggaaacacggtctcaccgccc 421 |||||||||||| ||||||||| ||| |||||| ||| || || | |||||||| ||| Sbjct: 872 ttataaaatggtgatgagctgctgttagctttagaagaggggaaaatagtctcaccaccc 813 Query: 422 tcttcaacatccgaaaggtacataagaacagtggctatgcgctggcccccatttttggtg 481 ||||||||||| ||||| |||||||||| ||| ||||| ||||| ||||| ||||||||| Sbjct: 812 tcttcaacatcagaaagatacataagaagagttgctatacgctgccccccgtttttggtg 753 Query: 482 ttgaaatcatcatggaagtaatcaaagtgaggttcatatttctgtccaacttcatagtgg 541 ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 752 ttgaattcatcatggaagtaatcgaagtgaggttcatacttctgtccaacttcatagtgg 693 Query: 542 agaacctgaaggccctctccgttttctacaggtatgaaggtgaaatctgatattcttttc 601 || || ||||| ||||||||||| |||||||||||||||||| | |||||||| |||||| Sbjct: 692 aggacttgaagaccctctccgttctctacaggtatgaaggtgtagtctgatatccttttc 633 Query: 602 tcaatggtgcgaacaattttgtcttgcc 629 || || || || | ||||||||| |||| Sbjct: 632 tcgatcgtacggataattttgtcctgcc 605
>ref|NM_197179.1| Oryza sativa (japonica cultivar-group) putative prolyl 4-hydroxylase, alpha subunit (OSJNBa0017E08.15), mRNA Length = 1032 Score = 365 bits (184), Expect = 1e-97 Identities = 334/384 (86%) Strand = Plus / Minus Query: 246 caccatggaggcttgtgggatccagggttccatcaggcctcatgctccagaaaagtaatg 305 ||||||| |||||||||| ||||| | |||||||||||||||||||||||||| || | Sbjct: 895 caccatgaaggcttgtggcatccaaagacccatcaggcctcatgctccagaaaagcaaag 836 Query: 306 catctcccatcttcggtttgacagatataccccgttttgcacattcagacagctcattat 365 ||||||||||||| |||||||||| | |||| || |||||||||||||||||||||| Sbjct: 835 catctcccatcttgggtttgacagccaaacccttcttagcacattcagacagctcattat 776 Query: 366 aaaatggtattgagctgctattaactttagcagaaggaaacacggtctcaccgccctctt 425 |||||||| ||||||||| ||| |||||| ||| || || | |||||||| ||||||| Sbjct: 775 aaaatggtgatgagctgctgttagctttagaagaggggaaaatagtctcaccaccctctt 716 Query: 426 caacatccgaaaggtacataagaacagtggctatgcgctggcccccatttttggtgttga 485 ||||||| ||||| |||||||||| ||| ||||| ||||| ||||| ||||||||||||| Sbjct: 715 caacatcagaaagatacataagaagagttgctatacgctgccccccgtttttggtgttga 656 Query: 486 aatcatcatggaagtaatcaaagtgaggttcatatttctgtccaacttcatagtggagaa 545 | ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| | Sbjct: 655 attcatcatggaagtaatcgaagtgaggttcatacttctgtccaacttcatagtggagga 596 Query: 546 cctgaaggccctctccgttttctacaggtatgaaggtgaaatctgatattcttttctcaa 605 | ||||| ||||||||||| |||||||||||||||||| | |||||||| |||||||| | Sbjct: 595 cttgaagaccctctccgttctctacaggtatgaaggtgtagtctgatatccttttctcga 536 Query: 606 tggtgcgaacaattttgtcttgcc 629 | || || | ||||||||| |||| Sbjct: 535 tcgtacggataattttgtcctgcc 512
>gb|AC068923.12| Oryza sativa chromosome 10 BAC OSJNBa0017E08 genomic sequence, complete sequence Length = 136120 Score = 161 bits (81), Expect = 3e-36 Identities = 114/125 (91%) Strand = Plus / Plus Query: 440 tacataagaacagtggctatgcgctggcccccatttttggtgttgaaatcatcatggaag 499 |||||||||| ||| ||||| ||||| ||||| |||||||||||||| |||||||||||| Sbjct: 38375 tacataagaagagttgctatacgctgccccccgtttttggtgttgaattcatcatggaag 38434 Query: 500 taatcaaagtgaggttcatatttctgtccaacttcatagtggagaacctgaaggccctct 559 ||||| |||||||||||||| ||||||||||||||||||||||| || ||||| |||||| Sbjct: 38435 taatcgaagtgaggttcatacttctgtccaacttcatagtggaggacttgaagaccctct 38494 Query: 560 ccgtt 564 ||||| Sbjct: 38495 ccgtt 38499 Score = 157 bits (79), Expect = 5e-35 Identities = 160/187 (85%) Strand = Plus / Plus Query: 246 caccatggaggcttgtgggatccagggttccatcaggcctcatgctccagaaaagtaatg 305 ||||||| |||||||||| ||||| | |||||||||||||||||||||||||| || | Sbjct: 38093 caccatgaaggcttgtggcatccaaagacccatcaggcctcatgctccagaaaagcaaag 38152 Query: 306 catctcccatcttcggtttgacagatataccccgttttgcacattcagacagctcattat 365 ||||||||||||| |||||||||| | |||| || |||||||||||||||||||||| Sbjct: 38153 catctcccatcttgggtttgacagccaaacccttcttagcacattcagacagctcattat 38212 Query: 366 aaaatggtattgagctgctattaactttagcagaaggaaacacggtctcaccgccctctt 425 |||||||| ||||||||| ||| |||||| ||| || || | |||||||| ||||||| Sbjct: 38213 aaaatggtgatgagctgctgttagctttagaagaggggaaaatagtctcaccaccctctt 38272 Query: 426 caacatc 432 ||||||| Sbjct: 38273 caacatc 38279 Score = 111 bits (56), Expect = 3e-21 Identities = 65/68 (95%) Strand = Plus / Plus Query: 182 ttgtactcatgaacacgaatccactttgtagatgaccatttgtcaccttttatcactgga 241 ||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 37931 ttgtactcatgaacacgcatccactttgtcgatgaccatttgttaccttttatcactgga 37990 Query: 242 catccacc 249 |||||||| Sbjct: 37991 catccacc 37998 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 567 ctacaggtatgaaggtgaaatctgatattcttttctcaatggtgcgaacaattttgtctt 626 ||||||||||||||||| | |||||||| |||||||| || || || | ||||||||| | Sbjct: 39744 ctacaggtatgaaggtgtagtctgatatccttttctcgatcgtacggataattttgtcct 39803 Query: 627 gcc 629 ||| Sbjct: 39804 gcc 39806
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 161 bits (81), Expect = 3e-36 Identities = 114/125 (91%) Strand = Plus / Minus Query: 440 tacataagaacagtggctatgcgctggcccccatttttggtgttgaaatcatcatggaag 499 |||||||||| ||| ||||| ||||| ||||| |||||||||||||| |||||||||||| Sbjct: 18468318 tacataagaagagttgctatacgctgccccccgtttttggtgttgaattcatcatggaag 18468259 Query: 500 taatcaaagtgaggttcatatttctgtccaacttcatagtggagaacctgaaggccctct 559 ||||| |||||||||||||| ||||||||||||||||||||||| || ||||| |||||| Sbjct: 18468258 taatcgaagtgaggttcatacttctgtccaacttcatagtggaggacttgaagaccctct 18468199 Query: 560 ccgtt 564 ||||| Sbjct: 18468198 ccgtt 18468194 Score = 157 bits (79), Expect = 5e-35 Identities = 160/187 (85%) Strand = Plus / Minus Query: 246 caccatggaggcttgtgggatccagggttccatcaggcctcatgctccagaaaagtaatg 305 ||||||| |||||||||| ||||| | |||||||||||||||||||||||||| || | Sbjct: 18468600 caccatgaaggcttgtggcatccaaagacccatcaggcctcatgctccagaaaagcaaag 18468541 Query: 306 catctcccatcttcggtttgacagatataccccgttttgcacattcagacagctcattat 365 ||||||||||||| |||||||||| | |||| || |||||||||||||||||||||| Sbjct: 18468540 catctcccatcttgggtttgacagccaaacccttcttagcacattcagacagctcattat 18468481 Query: 366 aaaatggtattgagctgctattaactttagcagaaggaaacacggtctcaccgccctctt 425 |||||||| ||||||||| ||| |||||| ||| || || | |||||||| ||||||| Sbjct: 18468480 aaaatggtgatgagctgctgttagctttagaagaggggaaaatagtctcaccaccctctt 18468421 Query: 426 caacatc 432 ||||||| Sbjct: 18468420 caacatc 18468414 Score = 111 bits (56), Expect = 3e-21 Identities = 65/68 (95%) Strand = Plus / Minus Query: 182 ttgtactcatgaacacgaatccactttgtagatgaccatttgtcaccttttatcactgga 241 ||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 18468762 ttgtactcatgaacacgcatccactttgtcgatgaccatttgttaccttttatcactgga 18468703 Query: 242 catccacc 249 |||||||| Sbjct: 18468702 catccacc 18468695 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 567 ctacaggtatgaaggtgaaatctgatattcttttctcaatggtgcgaacaattttgtctt 626 ||||||||||||||||| | |||||||| |||||||| || || || | ||||||||| | Sbjct: 18466949 ctacaggtatgaaggtgtagtctgatatccttttctcgatcgtacggataattttgtcct 18466890 Query: 627 gcc 629 ||| Sbjct: 18466889 gcc 18466887
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 161 bits (81), Expect = 3e-36 Identities = 114/125 (91%) Strand = Plus / Minus Query: 440 tacataagaacagtggctatgcgctggcccccatttttggtgttgaaatcatcatggaag 499 |||||||||| ||| ||||| ||||| ||||| |||||||||||||| |||||||||||| Sbjct: 18478371 tacataagaagagttgctatacgctgccccccgtttttggtgttgaattcatcatggaag 18478312 Query: 500 taatcaaagtgaggttcatatttctgtccaacttcatagtggagaacctgaaggccctct 559 ||||| |||||||||||||| ||||||||||||||||||||||| || ||||| |||||| Sbjct: 18478311 taatcgaagtgaggttcatacttctgtccaacttcatagtggaggacttgaagaccctct 18478252 Query: 560 ccgtt 564 ||||| Sbjct: 18478251 ccgtt 18478247 Score = 157 bits (79), Expect = 5e-35 Identities = 160/187 (85%) Strand = Plus / Minus Query: 246 caccatggaggcttgtgggatccagggttccatcaggcctcatgctccagaaaagtaatg 305 ||||||| |||||||||| ||||| | |||||||||||||||||||||||||| || | Sbjct: 18478653 caccatgaaggcttgtggcatccaaagacccatcaggcctcatgctccagaaaagcaaag 18478594 Query: 306 catctcccatcttcggtttgacagatataccccgttttgcacattcagacagctcattat 365 ||||||||||||| |||||||||| | |||| || |||||||||||||||||||||| Sbjct: 18478593 catctcccatcttgggtttgacagccaaacccttcttagcacattcagacagctcattat 18478534 Query: 366 aaaatggtattgagctgctattaactttagcagaaggaaacacggtctcaccgccctctt 425 |||||||| ||||||||| ||| |||||| ||| || || | |||||||| ||||||| Sbjct: 18478533 aaaatggtgatgagctgctgttagctttagaagaggggaaaatagtctcaccaccctctt 18478474 Query: 426 caacatc 432 ||||||| Sbjct: 18478473 caacatc 18478467 Score = 111 bits (56), Expect = 3e-21 Identities = 65/68 (95%) Strand = Plus / Minus Query: 182 ttgtactcatgaacacgaatccactttgtagatgaccatttgtcaccttttatcactgga 241 ||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 18478815 ttgtactcatgaacacgcatccactttgtcgatgaccatttgttaccttttatcactgga 18478756 Query: 242 catccacc 249 |||||||| Sbjct: 18478755 catccacc 18478748 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 567 ctacaggtatgaaggtgaaatctgatattcttttctcaatggtgcgaacaattttgtctt 626 ||||||||||||||||| | |||||||| |||||||| || || || | ||||||||| | Sbjct: 18477002 ctacaggtatgaaggtgtagtctgatatccttttctcgatcgtacggataattttgtcct 18476943 Query: 627 gcc 629 ||| Sbjct: 18476942 gcc 18476940
>gb|AY085158.1| Arabidopsis thaliana clone 13404 mRNA, complete sequence Length = 1337 Score = 129 bits (65), Expect = 1e-26 Identities = 329/417 (78%) Strand = Plus / Minus Query: 193 aacacgaatccactttgtagatgaccatttgtcaccttttatcactggacatccaccatg 252 |||| ||||||| || ||||||||||| |||| ||| | ||||| |||||||||||||| Sbjct: 991 aacatgaatccatttggtagatgaccacttgttccctctaatcacaggacatccaccatg 932 Query: 253 gaggcttgtgggatccagggttccatcaggcctcatgctccagaaaagtaatgcatctcc 312 | ||||| ||||| || || ||||||||||||||||||||||||| |||||||| || Sbjct: 931 caaacttgtaggatctagtgtagcatcaggcctcatgctccagaaaagcaatgcatcacc 872 Query: 313 catcttcggtttgacagatataccccgttttgcacattcagacagctcattataaaatgg 372 ||| |||| || || || | ||| ||| |||| ||||| ||||||||||| |||| Sbjct: 871 cattctcggctttacggaaagtccctttttcccacactcagagagctcattataccatgg 812 Query: 373 tattgagctgctattaactttagcagaaggaaacacggtctcaccgccctcttcaacatc 432 || || || ||| | || |||| ||||||||| || |||||||| || |||||||| Sbjct: 811 tacagaactaaaattcatattggcagcaggaaacactgtttcaccgccttcctcaacatc 752 Query: 433 cgaaaggtacataagaacagtggctatgcgctggcccccatttttggtgttgaaatcatc 492 ||| || |||||||| | || || || || || || |||||||| |||||||| ||||| Sbjct: 751 cgacagatacataagcattgtagccatccgttgacctccatttttagtgttgaactcatc 692 Query: 493 atggaagtaatcaaagtgaggttcatatttctgtccaacttcatagtggagaacctgaag 552 | || |||||| |||| |||||||| || || || |||| ||||| ||||| ||||| Sbjct: 691 aacaaaataatcatagtgtggttcatacttttgccctgcttcgtagtgaagaacttgaag 632 Query: 553 gccctctccgttttctacaggtatgaaggtgaaatctgatattcttttctcaatggt 609 || || || | ||| |||| || |||||| |||||| |||||||||||||||||| Sbjct: 631 tccttcaccatgatctgcaggaataaaggtgtaatctgctattcttttctcaatggt 575
>ref|NM_101878.2| Arabidopsis thaliana oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and > AT1G20270 mRNA, complete cds Length = 1336 Score = 123 bits (62), Expect = 7e-25 Identities = 323/410 (78%) Strand = Plus / Minus Query: 200 atccactttgtagatgaccatttgtcaccttttatcactggacatccaccatggaggctt 259 ||||| || ||||||||||| |||| ||| | ||||| |||||||||||||| | ||| Sbjct: 983 atccatttggtagatgaccacttgttccctctaatcacaggacatccaccatgcaaactt 924 Query: 260 gtgggatccagggttccatcaggcctcatgctccagaaaagtaatgcatctcccatcttc 319 || ||||| || || ||||||||||||||||||||||||| |||||||| ||||| || Sbjct: 923 gtaggatctagtgtagcatcaggcctcatgctccagaaaagcaatgcatcacccattctc 864 Query: 320 ggtttgacagatataccccgttttgcacattcagacagctcattataaaatggtattgag 379 || || || || | ||| ||| |||| ||||| ||||||||||| |||||| || Sbjct: 863 ggctttacggaaagtccctttttcccacactcagagagctcattataccatggtacagaa 804 Query: 380 ctgctattaactttagcagaaggaaacacggtctcaccgccctcttcaacatccgaaagg 439 || ||| | || |||| ||||||||| || |||||||| || ||||||||||| || Sbjct: 803 ctaaaattcatattggcagcaggaaacactgtttcaccgccttcctcaacatccgacaga 744 Query: 440 tacataagaacagtggctatgcgctggcccccatttttggtgttgaaatcatcatggaag 499 |||||||| | || || || || || || |||||||| |||||||| |||||| || Sbjct: 743 tacataagcattgtagccatccgttgacctccatttttagtgttgaactcatcaacaaaa 684 Query: 500 taatcaaagtgaggttcatatttctgtccaacttcatagtggagaacctgaaggccctct 559 |||||| |||| |||||||| || || || |||| ||||| ||||| ||||| || || Sbjct: 683 taatcatagtgtggttcatacttttgccctgcttcgtagtgaagaacttgaagtccttca 624 Query: 560 ccgttttctacaggtatgaaggtgaaatctgatattcttttctcaatggt 609 || | ||| |||| || |||||| |||||| |||||||||||||||||| Sbjct: 623 ccatgatctgcaggaataaaggtgtaatctgctattcttttctcaatggt 574
>gb|BT025038.1| Arabidopsis thaliana At1g20270 mRNA, complete cds Length = 864 Score = 123 bits (62), Expect = 7e-25 Identities = 323/410 (78%) Strand = Plus / Minus Query: 200 atccactttgtagatgaccatttgtcaccttttatcactggacatccaccatggaggctt 259 ||||| || ||||||||||| |||| ||| | ||||| |||||||||||||| | ||| Sbjct: 839 atccatttggtagatgaccacttgttccctctaatcacaggacatccaccatgcaaactt 780 Query: 260 gtgggatccagggttccatcaggcctcatgctccagaaaagtaatgcatctcccatcttc 319 || ||||| || || ||||||||||||||||||||||||| |||||||| ||||| || Sbjct: 779 gtaggatctagtgtagcatcaggcctcatgctccagaaaagcaatgcatcacccattctc 720 Query: 320 ggtttgacagatataccccgttttgcacattcagacagctcattataaaatggtattgag 379 || || || || | ||| ||| |||| ||||| ||||||||||| |||||| || Sbjct: 719 ggctttacggaaagtccctttttcccacactcagagagctcattataccatggtacagaa 660 Query: 380 ctgctattaactttagcagaaggaaacacggtctcaccgccctcttcaacatccgaaagg 439 || ||| | || |||| ||||||||| || |||||||| || ||||||||||| || Sbjct: 659 ctaaaattcatattggcagcaggaaacactgtttcaccgccttcctcaacatccgacaga 600 Query: 440 tacataagaacagtggctatgcgctggcccccatttttggtgttgaaatcatcatggaag 499 |||||||| | || || || || || || |||||||| |||||||| |||||| || Sbjct: 599 tacataagcattgtagccatccgttgacctccatttttagtgttgaactcatcaacaaaa 540 Query: 500 taatcaaagtgaggttcatatttctgtccaacttcatagtggagaacctgaaggccctct 559 |||||| |||| |||||||| || || || |||| ||||| ||||| ||||| || || Sbjct: 539 taatcatagtgtggttcatacttttgccctgcttcgtagtgaagaacttgaagtccttca 480 Query: 560 ccgttttctacaggtatgaaggtgaaatctgatattcttttctcaatggt 609 || | ||| |||| || |||||| |||||| |||||||||||||||||| Sbjct: 479 ccatgatctgcaggaataaaggtgtaatctgctattcttttctcaatggt 430
>ref|NM_127326.3| Arabidopsis thaliana oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and > AT2G17720 mRNA, complete cds Length = 1325 Score = 109 bits (55), Expect = 1e-20 Identities = 148/179 (82%) Strand = Plus / Minus Query: 428 acatccgaaaggtacataagaacagtggctatgcgctggcccccatttttggtgttgaaa 487 ||||| || ||||||||||| ||||| ||||| || || || ||||| ||||||||||| Sbjct: 800 acatcagagaggtacataagcacagtagctattcgttgtcctccattcttggtgttgaac 741 Query: 488 tcatcatggaagtaatcaaagtgaggttcatatttctgtccaacttcatagtggagaacc 547 ||||| ||| || ||| ||||||| ||||| ||||| ||||||| ||||| ||||| Sbjct: 740 tcatctaagaaatagtcatagtgaggctcatacttctgcccaacttggtagtgaagaact 681 Query: 548 tgaaggccctctccgttttctacaggtatgaaggtgaaatctgatattcttttctcaat 606 ||||| || || || ||||| ||||| ||||||||||||||||| || ||||||||||| Sbjct: 680 tgaagaccttcaccattttcaacaggaatgaaggtgaaatctgaaatccttttctcaat 622 Score = 63.9 bits (32), Expect = 6e-07 Identities = 83/100 (83%) Strand = Plus / Minus Query: 212 gatgaccatttgtcaccttttatcactggacatccaccatggaggcttgtgggatccagg 271 ||||||||||||| ||||| | ||||||||||||||| || | ||| | || || || Sbjct: 1016 gatgaccatttgtttcctttcaccactggacatccaccgtgcaagctcgaagggtctaga 957 Query: 272 gttccatcaggcctcatgctccagaaaagtaatgcatctc 311 | | |||||||||||||| ||||||||||||| ||||||| Sbjct: 956 gatgcatcaggcctcatgttccagaaaagtaaagcatctc 917
>gb|BT024854.1| Arabidopsis thaliana At2g17720 gene, complete cds Length = 876 Score = 109 bits (55), Expect = 1e-20 Identities = 148/179 (82%) Strand = Plus / Minus Query: 428 acatccgaaaggtacataagaacagtggctatgcgctggcccccatttttggtgttgaaa 487 ||||| || ||||||||||| ||||| ||||| || || || ||||| ||||||||||| Sbjct: 623 acatcagagaggtacataagcacagtagctattcgttgtcctccattcttggtgttgaac 564 Query: 488 tcatcatggaagtaatcaaagtgaggttcatatttctgtccaacttcatagtggagaacc 547 ||||| ||| || ||| ||||||| ||||| ||||| ||||||| ||||| ||||| Sbjct: 563 tcatctaagaaatagtcatagtgaggctcatacttctgcccaacttggtagtgaagaact 504 Query: 548 tgaaggccctctccgttttctacaggtatgaaggtgaaatctgatattcttttctcaat 606 ||||| || || || ||||| ||||| ||||||||||||||||| || ||||||||||| Sbjct: 503 tgaagaccttcaccattttcaacaggaatgaaggtgaaatctgaaatccttttctcaat 445 Score = 63.9 bits (32), Expect = 6e-07 Identities = 83/100 (83%) Strand = Plus / Minus Query: 212 gatgaccatttgtcaccttttatcactggacatccaccatggaggcttgtgggatccagg 271 ||||||||||||| ||||| | ||||||||||||||| || | ||| | || || || Sbjct: 839 gatgaccatttgtttcctttcaccactggacatccaccgtgcaagctcgaagggtctaga 780 Query: 272 gttccatcaggcctcatgctccagaaaagtaatgcatctc 311 | | |||||||||||||| ||||||||||||| ||||||| Sbjct: 779 gatgcatcaggcctcatgttccagaaaagtaaagcatctc 740
>gb|AY087497.1| Arabidopsis thaliana clone 36054 mRNA, complete sequence Length = 1220 Score = 109 bits (55), Expect = 1e-20 Identities = 148/179 (82%) Strand = Plus / Minus Query: 428 acatccgaaaggtacataagaacagtggctatgcgctggcccccatttttggtgttgaaa 487 ||||| || ||||||||||| ||||| ||||| || || || ||||| ||||||||||| Sbjct: 700 acatcagagaggtacataagcacagtagctattcgttgtcctccattcttggtgttgaac 641 Query: 488 tcatcatggaagtaatcaaagtgaggttcatatttctgtccaacttcatagtggagaacc 547 ||||| ||| || ||| ||||||| ||||| ||||| ||||||| ||||| ||||| Sbjct: 640 tcatctaagaaatagtcatagtgaggctcatacttctgcccaacttggtagtgaagaact 581 Query: 548 tgaaggccctctccgttttctacaggtatgaaggtgaaatctgatattcttttctcaat 606 ||||| || || || ||||| ||||| ||||||||||||||||| || ||||||||||| Sbjct: 580 tgaagaccttcaccattttcaacaggaatgaaggtgaaatctgaaatccttttctcaat 522 Score = 63.9 bits (32), Expect = 6e-07 Identities = 83/100 (83%) Strand = Plus / Minus Query: 212 gatgaccatttgtcaccttttatcactggacatccaccatggaggcttgtgggatccagg 271 ||||||||||||| ||||| | ||||||||||||||| || | ||| | || || || Sbjct: 916 gatgaccatttgtttcctttcaccactggacatccaccgtgcaagctcgaagggtctaga 857 Query: 272 gttccatcaggcctcatgctccagaaaagtaatgcatctc 311 | | |||||||||||||| ||||||||||||| ||||||| Sbjct: 856 gatgcatcaggcctcatgttccagaaaagtaaagcatctc 817
>emb|BX820026.1|CNS0A8G2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS64ZA08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1288 Score = 101 bits (51), Expect = 3e-18 Identities = 147/179 (82%) Strand = Plus / Minus Query: 428 acatccgaaaggtacataagaacagtggctatgcgctggcccccatttttggtgttgaaa 487 ||||| || ||||||||||| ||||| ||||| || || || ||||| ||||||||||| Sbjct: 800 acatcagagaggtacataagcacagtagctattcgttgtcctccattcttggtgttgaac 741 Query: 488 tcatcatggaagtaatcaaagtgaggttcatatttctgtccaacttcatagtggagaacc 547 ||||| || || ||| ||||||| ||||| ||||| ||||||| ||||| ||||| Sbjct: 740 tcatctaagagatagtcatagtgaggctcatacttctgcccaacttggtagtgaagaact 681 Query: 548 tgaaggccctctccgttttctacaggtatgaaggtgaaatctgatattcttttctcaat 606 ||||| || || || ||||| ||||| ||||||||||||||||| || ||||||||||| Sbjct: 680 tgaagaccttcaccattttcaacaggaatgaaggtgaaatctgaaatccttttctcaat 622 Score = 63.9 bits (32), Expect = 6e-07 Identities = 83/100 (83%) Strand = Plus / Minus Query: 212 gatgaccatttgtcaccttttatcactggacatccaccatggaggcttgtgggatccagg 271 ||||||||||||| ||||| | ||||||||||||||| || | ||| | || || || Sbjct: 1016 gatgaccatttgtttcctttcaccactggacatccaccgtgcaagctcgaagggtcgaga 957 Query: 272 gttccatcaggcctcatgctccagaaaagtaatgcatctc 311 | | |||||||||||||| ||||||||||||| ||||||| Sbjct: 956 gatgcatcaggcctcatgttccagaaaagtaaagcatctc 917
>gb|AC137702.18| Medicago truncatula clone mth2-7k10, complete sequence Length = 94750 Score = 83.8 bits (42), Expect = 6e-13 Identities = 102/122 (83%) Strand = Plus / Minus Query: 440 tacataagaacagtggctatgcgctggcccccatttttggtgttgaaatcatcatggaag 499 ||||||||||| || || | || ||||| ||||| || |||||||| |||||| ||||| Sbjct: 24624 tacataagaactgttgcaactcgttggcctccattcttagtgttgaactcatcaaggaag 24565 Query: 500 taatcaaagtgaggttcatatttctgtccaacttcatagtggagaacctgaaggccctct 559 |||||| | ||||| |||||||| | |||||| ||||||| ||||||||||| |||||| Sbjct: 24564 taatcataatgaggctcatatttttccccaactccatagtgaagaacctgaagtccctct 24505 Query: 560 cc 561 || Sbjct: 24504 cc 24503 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Minus Query: 392 ttagcagaaggaaacacggtctcaccgccctcttcaac 429 ||||||| |||||| ||||||||||| || |||||||| Sbjct: 24771 ttagcagcaggaaatacggtctcacctccttcttcaac 24734 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Minus Query: 509 tgaggttcatatttctgtccaacttcatagtggagaacctgaaggccctctcc 561 ||||| ||| ||||||| || ||||||||||| | || |||||| |||||||| Sbjct: 48184 tgaggctcaaatttctgcccgacttcatagtgaataatctgaagtccctctcc 48132
>gb|AY107112.1| Zea mays PCO093706 mRNA sequence Length = 1209 Score = 81.8 bits (41), Expect = 3e-12 Identities = 131/161 (81%) Strand = Plus / Minus Query: 422 tcttcaacatccgaaaggtacataagaacagtggctatgcgctggcccccatttttggtg 481 ||||||||||| || || ||||| |||| ||| || || | ||| || ||||| |||||| Sbjct: 482 tcttcaacatctgatagatacatcagaagagtagccatcctctgaccaccattcttggtg 423 Query: 482 ttgaaatcatcatggaagtaatcaaagtgaggttcatatttctgtccaacttcatagtgg 541 || || |||||| | || |||||||||||||| ||||| ||||| || |||||||| || Sbjct: 422 ttaaactcatcaagaaaataatcaaagtgaggctcatacttctgcccgacttcataatgc 363 Query: 542 agaacctgaaggccctctccgttttctacaggtatgaaggt 582 || || || || |||||||| | ||||||||||||||||| Sbjct: 362 agtacttggagtccctctccatgatctacaggtatgaaggt 322 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 285 tcatgctccagaaaagtaatgcatctcccatcttcggtttgacaga 330 |||||||||||||||| | ||||||||||||||| ||||||||||| Sbjct: 619 tcatgctccagaaaagaagtgcatctcccatctttggtttgacaga 574
>emb|CR932965.2| Medicago truncatula chromosome 5 clone mth2-47e6, COMPLETE SEQUENCE Length = 96647 Score = 79.8 bits (40), Expect = 1e-11 Identities = 97/116 (83%) Strand = Plus / Minus Query: 437 aggtacataagaacagtggctatgcgctggcccccatttttggtgttgaaatcatcatgg 496 |||||||| || || || ||||||||||| |||||||| || ||||| || |||||| | Sbjct: 46907 aggtacatcagtaccgttgctatgcgctgacccccattctttgtgttaaattcatcaaga 46848 Query: 497 aagtaatcaaagtgaggttcatatttctgtccaacttcatagtggagaacctgaag 552 ||||| ||| ||||||| ||||| || |||||||||||||| || ||||| ||||| Sbjct: 46847 aagtagtcatagtgaggctcatacttttgtccaacttcataatgtagaacttgaag 46792 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 276 catcaggcctcatgctccagaaaagtaatgcatc 309 |||| ||| ||||||||||||||||||| ||||| Sbjct: 47164 catccggcttcatgctccagaaaagtaaagcatc 47131 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 392 ttagcagaaggaaacacggtctcaccgccctcttcaacatc 432 ||||||| ||| ||||| |||||||| || ||||||||||| Sbjct: 47048 ttagcagcagggaacactgtctcacccccttcttcaacatc 47008
>ref|NM_126004.1| Arabidopsis thaliana oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and > AT5G66060 mRNA, complete cds Length = 804 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 276 catcaggcctcatgctccagaaaagtaatgcatctcccatcttcggtttgacaga 330 |||||||| |||||||||||||||| ||||||||||||||||| ||||| ||||| Sbjct: 769 catcaggcgtcatgctccagaaaagcaatgcatctcccatctttggtttcacaga 715 Score = 77.8 bits (39), Expect = 4e-11 Identities = 165/207 (79%) Strand = Plus / Minus Query: 400 aggaaacacggtctcaccgccctcttcaacatccgaaaggtacataagaacagtggctat 459 ||||||||| || ||||| ||||| |||||||| || |||||||| ||||| |||||||| Sbjct: 645 aggaaacactgtttcacccccctcctcaacatctgataggtacatgagaactgtggctat 586 Query: 460 gcgctggcccccatttttggtgttgaaatcatcatggaagtaatcaaagtgaggttcata 519 ||||| |||||||| | ||||| | ||||| |||||| || | ||||| ||||| Sbjct: 585 ccgctgtcccccattcctagtgttatactcatccatgaagtagtcgtaatgaggctcata 526 Query: 520 tttctgtccaacttcatagtggagaacctgaaggccctctccgttttctacaggtatgaa 579 || || |||| |||||||| ||||| ||||| || || || | || || |||||||| Sbjct: 525 cttttgcccaatctcatagtgcagaacttgaagaccttccccatgctcaactggtatgaa 466 Query: 580 ggtgaaatctgatattcttttctcaat 606 || ||||||||||| ||||||||||| Sbjct: 465 tgtaaaatctgatatccttttctcaat 439
>ref|NM_119747.2| Arabidopsis thaliana oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and > AT4G35810 mRNA, complete cds Length = 873 Score = 77.8 bits (39), Expect = 4e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 508 gtgaggttcatatttctgtccaacttcatagtggagaacctgaaggccctctccgttttc 567 |||||| |||||| |||| ||||||||||| || ||||| || || |||||||| ||||| Sbjct: 543 gtgaggctcatatctctgcccaacttcataatgaagaacttgcagcccctctccattttc 484 Query: 568 tacaggtatgaaggtgaaatctgatattcttttctcaat 606 | ||| ||||||||||||||||| || || |||||||| Sbjct: 483 tggaggaatgaaggtgaaatctgaaatcctattctcaat 445 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Minus Query: 182 ttgtactcatgaacacgaatccactttgtagatgaccatttgtcaccttttatcactgga 241 |||||||| ||||| ||| ||| || || |||||||| |||| ||||| ||||||||| Sbjct: 869 ttgtactcgtgaacgtgaaaccatttagttgatgaccacttgtttcctttgatcactgga 810 Query: 242 catccaccatg 252 || |||||||| Sbjct: 809 caaccaccatg 799
>dbj|AB011474.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K2A18 Length = 79899 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 276 catcaggcctcatgctccagaaaagtaatgcatctcccatcttcggtttgacaga 330 |||||||| |||||||||||||||| ||||||||||||||||| ||||| ||||| Sbjct: 37375 catcaggcgtcatgctccagaaaagcaatgcatctcccatctttggtttcacaga 37321 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 572 ggtatgaaggtgaaatctgatattcttttctcaat 606 |||||||| || ||||||||||| ||||||||||| Sbjct: 36877 ggtatgaatgtaaaatctgatatccttttctcaat 36843
>ref|XM_468502.1| Oryza sativa (japonica cultivar-group), mRNA Length = 933 Score = 73.8 bits (37), Expect = 6e-10 Identities = 217/277 (78%) Strand = Plus / Minus Query: 285 tcatgctccagaaaagtaatgcatctcccatcttcggtttgacagatataccccgttttg 344 |||||||||| ||||| | |||||||||||||| |||||||||| | ||| | | | Sbjct: 823 tcatgctccaaaaaagaagcgcatctcccatctttggtttgacagcaaggccctttctgg 764 Query: 345 cacattcagacagctcattataaaatggtattgagctgctattaactttagcagaaggaa 404 |||| || || || |||||||| |||||| ||| ||||| || || || ||| ||| | Sbjct: 763 cacactctgaaagttcattataccatggtaatgaactgctgttcacatttgcatcaggga 704 Query: 405 acacggtctcaccgccctcttcaacatccgaaaggtacataagaacagtggctatgcgct 464 | | |||||||| || ||||||||||| || || ||||| |||| ||| || || | || Sbjct: 703 aaatagtctcacccccttcttcaacatcagatagatacatcagaagagtagccattctct 644 Query: 465 ggcccccatttttggtgttgaaatcatcatggaagtaatcaaagtgaggttcatatttct 524 | || ||||| ||||||||| | |||||| | || || ||||||||||| || || |||| Sbjct: 643 gaccaccattcttggtgttgtactcatcaagaaaatagtcaaagtgaggctcgtacttct 584 Query: 525 gtccaacttcatagtggagaacctgaaggccctctcc 561 | || ||||||||||| ||||| || || |||||||| Sbjct: 583 gcccgacttcatagtgcagaacttggagtccctctcc 547
>ref|NM_119748.1| Arabidopsis thaliana oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and > AT4G35820 mRNA, complete cds Length = 819 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Minus Query: 503 tcaaagtgaggttcatatttctgtccaacttcatagtggagaacctgaaggccctctccg 562 ||||||||||| ||| ||||||| ||||||||||| | || ||| ||||| |||||| Sbjct: 596 tcaaagtgaggctcaaatttctgcccaacttcataattgataacttgaagcgtttctccg 537 Query: 563 ttttctacaggtatgaaggtgaaatctgatattcttttctcaat 606 |||||| ||| ||||||||||| ||||| || ||||||||||| Sbjct: 536 ttttcttgaggaatgaaggtgaattctgaaatccttttctcaat 493
>gb|AC097175.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1119_H02, complete sequence Length = 138584 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 194 acacgaatccactttgtagatgaccatttgtcaccttttatcactggacatccaccatgg 253 ||||||||||||||||||| |||||||| ||||| ||||| ||||| |||||| | ||| Sbjct: 101875 acacgaatccactttgtagcagaccatttctcaccctttatgactgggcatccagcgtgg 101816 Query: 254 aggct 258 ||||| Sbjct: 101815 aggct 101811 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 439 gtacataagaacagtggctatgcg 462 ||||||||||||||| |||||||| Sbjct: 101347 gtacataagaacagtagctatgcg 101324
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 194 acacgaatccactttgtagatgaccatttgtcaccttttatcactggacatccaccatgg 253 ||||||||||||||||||| |||||||| ||||| ||||| ||||| |||||| | ||| Sbjct: 23898040 acacgaatccactttgtagcagaccatttctcaccctttatgactgggcatccagcgtgg 23897981 Query: 254 aggct 258 ||||| Sbjct: 23897980 aggct 23897976 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 439 gtacataagaacagtggctatgcg 462 ||||||||||||||| |||||||| Sbjct: 23897512 gtacataagaacagtagctatgcg 23897489
>dbj|AK103739.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138K17, full insert sequence Length = 1650 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 194 acacgaatccactttgtagatgaccatttgtcaccttttatcactggacatccaccatgg 253 ||||||||||||||||||| |||||||| ||||| ||||| ||||| |||||| | ||| Sbjct: 977 acacgaatccactttgtagcagaccatttctcaccctttatgactgggcatccagcgtgg 918 Query: 254 aggct 258 ||||| Sbjct: 917 aggct 913 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 439 gtacataagaacagtggctatgcg 462 ||||||||||||||| |||||||| Sbjct: 726 gtacataagaacagtagctatgcg 703
>gb|AY587604.1| Dianthus caryophyllus prolyl 4-hydroxylase (P4H1) mRNA, complete cds Length = 1201 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 494 tggaagtaatcaaagtgaggttcatatttctg 525 |||||||||||||||||||||||||||||||| Sbjct: 539 tggaagtaatcaaagtgaggttcatatttctg 508
>gb|AC026234.4|F14O10 Sequence of BAC F14O10 from Arabidopsis thaliana chromosome 1, complete sequence Length = 53889 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 276 catcaggcctcatgctccagaaaagtaatgcatctcccat 315 ||||||||||||||||||||||||| |||||||| ||||| Sbjct: 44041 catcaggcctcatgctccagaaaagcaatgcatcacccat 44002 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Minus Query: 578 aaggtgaaatctgatattcttttctcaatggt 609 |||||| |||||| |||||||||||||||||| Sbjct: 43499 aaggtgtaatctgctattcttttctcaatggt 43468
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 470 ccatttttggtgttgaaatcatcatggaagtaatcaaagtgaggttcatatttctgtcca 529 ||||| ||||||||| | |||||| | || || ||||||||||| || || ||||| || Sbjct: 35565382 ccattcttggtgttgtactcatcaagaaaatagtcaaagtgaggctcgtacttctgcccg 35565323 Query: 530 acttcatagtggagaacctgaaggccctctcc 561 ||||||||||| ||||| || || |||||||| Sbjct: 35565322 acttcatagtgcagaacttggagtccctctcc 35565291 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 285 tcatgctccagaaaagtaatgcatctcccatcttcggtttgacag 329 |||||||||| ||||| | |||||||||||||| |||||||||| Sbjct: 35565659 tcatgctccaaaaaagaagcgcatctcccatctttggtttgacag 35565615 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 180 ctttgtactcatgaacacgaatccactttgtagatgaccatttgt 224 ||||||||||| | ||| | |||||||| || ||||||||||||| Sbjct: 35565956 ctttgtactcacggacatgcatccacttggttgatgaccatttgt 35565912
>dbj|AP004776.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0452F04 Length = 171421 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 470 ccatttttggtgttgaaatcatcatggaagtaatcaaagtgaggttcatatttctgtcca 529 ||||| ||||||||| | |||||| | || || ||||||||||| || || ||||| || Sbjct: 81774 ccattcttggtgttgtactcatcaagaaaatagtcaaagtgaggctcgtacttctgcccg 81715 Query: 530 acttcatagtggagaacctgaaggccctctcc 561 ||||||||||| ||||| || || |||||||| Sbjct: 81714 acttcatagtgcagaacttggagtccctctcc 81683 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 285 tcatgctccagaaaagtaatgcatctcccatcttcggtttgacag 329 |||||||||| ||||| | |||||||||||||| |||||||||| Sbjct: 82051 tcatgctccaaaaaagaagcgcatctcccatctttggtttgacag 82007 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 180 ctttgtactcatgaacacgaatccactttgtagatgaccatttgt 224 ||||||||||| | ||| | |||||||| || ||||||||||||| Sbjct: 82348 ctttgtactcacggacatgcatccacttggttgatgaccatttgt 82304
>emb|AL161588.2|ATCHRIV84 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 84 Length = 195452 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Minus Query: 508 gtgaggttcatatttctgtccaacttcatagtggagaacctgaaggccctctccgttttc 567 |||||| |||||| |||| ||||||||||| || ||||| || || |||||||| ||||| Sbjct: 41611 gtgaggctcatatctctgcccaacttcataatgaagaacttgcagcccctctccattttc 41552 Query: 568 t 568 | Sbjct: 41551 t 41551 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 503 tcaaagtgaggttcatatttctgtccaacttcata 537 ||||||||||| ||| ||||||| ||||||||||| Sbjct: 43864 tcaaagtgaggctcaaatttctgcccaacttcata 43830 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 575 atgaaggtgaaatctgatattcttttctcaat 606 ||||||||||| ||||| || ||||||||||| Sbjct: 43689 atgaaggtgaattctgaaatccttttctcaat 43658 Score = 40.1 bits (20), Expect = 8.6 Identities = 56/68 (82%) Strand = Plus / Minus Query: 182 ttgtactcatgaacacgaatccactttgtagatgaccatttgtcaccttttatcactgga 241 |||||||| ||||| ||| ||| || || |||||||| |||| ||||| ||||||||| Sbjct: 42113 ttgtactcgtgaacgtgaaaccatttagttgatgaccacttgtttcctttgatcactgga 42054 Query: 242 catccacc 249 || ||||| Sbjct: 42053 caaccacc 42046 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 575 atgaaggtgaaatctgatattcttttctcaat 606 ||||||||||||||||| || || |||||||| Sbjct: 41480 atgaaggtgaaatctgaaatcctattctcaat 41449
>gb|AY108734.1| Zea mays PCO107217 mRNA sequence Length = 1418 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Minus Query: 194 acacgaatccactttgtagatgaccatttgtcaccttttatcactggacatccaccatgg 253 ||||| |||||||| |||| |||||||| || |||||||| || || || ||||||||| Sbjct: 950 acacggatccacttcgtagccgaccatttctcgccttttatgaccgggcaaccaccatgg 891 Query: 254 aggct 258 ||||| Sbjct: 890 aggct 886
>emb|AL031986.1|ATF4B14 Arabidopsis thaliana DNA chromosome 4, BAC clone F4B14 (ESSA project) Length = 99461 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Minus Query: 508 gtgaggttcatatttctgtccaacttcatagtggagaacctgaaggccctctccgttttc 567 |||||| |||||| |||| ||||||||||| || ||||| || || |||||||| ||||| Sbjct: 33415 gtgaggctcatatctctgcccaacttcataatgaagaacttgcagcccctctccattttc 33356 Query: 568 t 568 | Sbjct: 33355 t 33355 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 503 tcaaagtgaggttcatatttctgtccaacttcata 537 ||||||||||| ||| ||||||| ||||||||||| Sbjct: 35668 tcaaagtgaggctcaaatttctgcccaacttcata 35634 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 575 atgaaggtgaaatctgatattcttttctcaat 606 ||||||||||| ||||| || ||||||||||| Sbjct: 35493 atgaaggtgaattctgaaatccttttctcaat 35462 Score = 40.1 bits (20), Expect = 8.6 Identities = 56/68 (82%) Strand = Plus / Minus Query: 182 ttgtactcatgaacacgaatccactttgtagatgaccatttgtcaccttttatcactgga 241 |||||||| ||||| ||| ||| || || |||||||| |||| ||||| ||||||||| Sbjct: 33917 ttgtactcgtgaacgtgaaaccatttagttgatgaccacttgtttcctttgatcactgga 33858 Query: 242 catccacc 249 || ||||| Sbjct: 33857 caaccacc 33850 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 575 atgaaggtgaaatctgatattcttttctcaat 606 ||||||||||||||||| || || |||||||| Sbjct: 33284 atgaaggtgaaatctgaaatcctattctcaat 33253
>gb|AC147499.5| Medicago truncatula clone mth2-22h5, complete sequence Length = 128625 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Plus Query: 193 aacacgaatccactttgtagatgaccatttgtcaccttttatcactggaca 243 |||| ||||||||||||| | |||||| || ||||||| ||||||||||| Sbjct: 62575 aacatgaatccactttgttgctgaccacttctcaccttcaatcactggaca 62625
>gb|DQ446899.1| Arabidopsis thaliana clone pENTR221-At4g35820 oxidoreductase 2OG-Fe(II) oxygenase family protein (At4g35820) mRNA, complete cds Length = 1209 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 503 tcaaagtgaggttcatatttctgtccaacttcata 537 ||||||||||| ||| ||||||| ||||||||||| Sbjct: 885 tcaaagtgaggctcaaatttctgcccaacttcata 851 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 575 atgaaggtgaaatctgatattcttttctcaat 606 ||||||||||| ||||| || ||||||||||| Sbjct: 710 atgaaggtgaattctgaaatccttttctcaat 679
>dbj|AP006382.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT32J05, TM0238, complete sequence Length = 131947 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Minus Query: 198 gaatccactttgtagatgaccatttgtcaccttttatcactggacatccaccatg 252 ||||||||||||| | ||||||||| ||||||| || ||||| |||||| |||| Sbjct: 29425 gaatccactttgtcgctgaccatttctcaccttcgattactgggcatccagcatg 29371
>gb|AC170260.2| Mus musculus BAC clone RP24-347N1 from chromosome 5, complete sequence Length = 165011 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 582 tgaaatctgatattcttttct 602 ||||||||||||||||||||| Sbjct: 58380 tgaaatctgatattcttttct 58360
>gb|AF251028.1|AF251029S2 Streptococcus gordonii strain GP204 alpha-isopropylmalate isomerase small subunit (leuD) gene, partial cds; SlyA-like protein gene, complete cds; and unknown genes Length = 2484 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 601 ctcaatggtgcgaacaatttt 621 ||||||||||||||||||||| Sbjct: 2013 ctcaatggtgcgaacaatttt 1993
>gb|BT013787.1| Lycopersicon esculentum clone 132681F, mRNA sequence Length = 1066 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Minus Query: 198 gaatccactttgtagatgaccatttgtcaccttttatcactggacatccaccatggaggc 257 ||||||||||||| | ||||||||| ||||||| | || || || ||||||||||||| Sbjct: 808 gaatccactttgttgctgaccatttctcaccttgaagtacagggcacccaccatggaggc 749 Query: 258 t 258 | Sbjct: 748 t 748
>emb|BX927336.18| Zebrafish DNA sequence from clone CH211-215P11 in linkage group 5, complete sequence Length = 200686 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 483 tgaaatcatcatggaagtaat 503 ||||||||||||||||||||| Sbjct: 85608 tgaaatcatcatggaagtaat 85588
>gb|AC123054.2| Mus musculus BAC clone RP24-220N11 from 5, complete sequence Length = 174874 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 582 tgaaatctgatattcttttct 602 ||||||||||||||||||||| Sbjct: 167888 tgaaatctgatattcttttct 167908
>emb|BX901972.12| Zebrafish DNA sequence from clone DKEY-24H22 in linkage group 1, complete sequence Length = 212798 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 483 tgaaatcatcatggaagtaat 503 ||||||||||||||||||||| Sbjct: 173021 tgaaatcatcatggaagtaat 173041
>emb|BX005361.16| Zebrafish DNA sequence from clone DKEY-19C8 in linkage group 8, complete sequence Length = 222110 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 483 tgaaatcatcatggaagtaat 503 ||||||||||||||||||||| Sbjct: 32853 tgaaatcatcatggaagtaat 32833
>emb|BX247865.15| Zebrafish DNA sequence from clone CH211-205J13 in linkage group 8, complete sequence Length = 169286 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 483 tgaaatcatcatggaagtaat 503 ||||||||||||||||||||| Sbjct: 159742 tgaaatcatcatggaagtaat 159762 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 483 tgaaatcatcatggaagtaat 503 ||||||||||||||||||||| Sbjct: 92474 tgaaatcatcatggaagtaat 92494 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 483 tgaaatcatcatggaagtaat 503 ||||||||||||||||||||| Sbjct: 40492 tgaaatcatcatggaagtaat 40512
>emb|BX649556.9| Zebrafish DNA sequence from clone DKEY-29M1 in linkage group 11, complete sequence Length = 197002 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 483 tgaaatcatcatggaagtaat 503 ||||||||||||||||||||| Sbjct: 49629 tgaaatcatcatggaagtaat 49649
>emb|BX000477.13| Zebrafish DNA sequence from clone CH211-59D8 in linkage group 10, complete sequence Length = 176689 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 483 tgaaatcatcatggaagtaat 503 ||||||||||||||||||||| Sbjct: 128837 tgaaatcatcatggaagtaat 128857
>gb|AC158522.2| Mus musculus BAC clone RP23-400N21 from chromosome 14, complete sequence Length = 209322 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 482 ttgaaatcatcatggaagtaa 502 ||||||||||||||||||||| Sbjct: 126627 ttgaaatcatcatggaagtaa 126647
>emb|BX248105.5| Zebrafish DNA sequence from clone CH211-270A9, complete sequence Length = 158673 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 483 tgaaatcatcatggaagtaat 503 ||||||||||||||||||||| Sbjct: 83387 tgaaatcatcatggaagtaat 83367
>emb|BX005374.5| Zebrafish DNA sequence from clone DKEY-29H23 in linkage group 15, complete sequence Length = 204318 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 483 tgaaatcatcatggaagtaat 503 ||||||||||||||||||||| Sbjct: 63282 tgaaatcatcatggaagtaat 63302
>emb|CR762435.19| Zebrafish DNA sequence from clone CH211-238C15 in linkage group 18, complete sequence Length = 157544 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 492 catggaagtaatcaaagtgag 512 ||||||||||||||||||||| Sbjct: 37653 catggaagtaatcaaagtgag 37673
>emb|CR376730.13| Zebrafish DNA sequence from clone CH211-205A14 in linkage group 20, complete sequence Length = 156481 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 483 tgaaatcatcatggaagtaat 503 ||||||||||||||||||||| Sbjct: 71303 tgaaatcatcatggaagtaat 71323
>emb|BX548157.5| Zebrafish DNA sequence from clone CH211-201B11 in linkage group 18, complete sequence Length = 195621 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 483 tgaaatcatcatggaagtaat 503 ||||||||||||||||||||| Sbjct: 121292 tgaaatcatcatggaagtaat 121272
>emb|BX005366.18| Zebrafish DNA sequence from clone DKEY-222J15 in linkage group 1, complete sequence Length = 162076 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 483 tgaaatcatcatggaagtaat 503 ||||||||||||||||||||| Sbjct: 86766 tgaaatcatcatggaagtaat 86786
>dbj|AK058935.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-E12, full insert sequence Length = 523 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 180 ctttgtactcatgaacacgaatccactttgtagatgaccatttgt 224 ||||||||||| | ||| | |||||||| || ||||||||||||| Sbjct: 119 ctttgtactcacggacatgcatccacttggttgatgaccatttgt 75
>emb|BX005399.30| Zebrafish DNA sequence from clone DKEY-3D16 in linkage group 8, complete sequence Length = 193926 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 483 tgaaatcatcatggaagtaat 503 ||||||||||||||||||||| Sbjct: 133439 tgaaatcatcatggaagtaat 133419
>emb|CR931725.6| Zebrafish DNA sequence from clone DKEY-22M10 in linkage group 11, complete sequence Length = 205299 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 483 tgaaatcatcatggaagtaat 503 ||||||||||||||||||||| Sbjct: 63751 tgaaatcatcatggaagtaat 63771
>emb|CR786581.30| Zebrafish DNA sequence from clone DKEY-179C19 in linkage group 8, complete sequence Length = 166217 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 483 tgaaatcatcatggaagtaat 503 ||||||||||||||||||||| Sbjct: 92164 tgaaatcatcatggaagtaat 92144
>emb|BX005242.6| Zebrafish DNA sequence from clone DKEY-67N17 in linkage group 16, complete sequence Length = 192177 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 483 tgaaatcatcatggaagtaat 503 ||||||||||||||||||||| Sbjct: 181622 tgaaatcatcatggaagtaat 181602
>emb|CR392005.15| Zebrafish DNA sequence from clone DKEY-254K18 in linkage group 5, complete sequence Length = 55105 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 483 tgaaatcatcatggaagtaat 503 ||||||||||||||||||||| Sbjct: 12179 tgaaatcatcatggaagtaat 12199
>ref|NM_121895.2| Arabidopsis thaliana oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and > AT5G18900 mRNA, complete cds Length = 1210 Score = 40.1 bits (20), Expect = 8.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 215 gaccatttgtcaccttttatcactggacatccaccatggaggct 258 |||||||| || |||| |||||| ||||||||||| || ||||| Sbjct: 832 gaccatttctctccttctatcacaggacatccaccgtgaaggct 789
>ref|NM_111505.2| Arabidopsis thaliana AT-P4H-2; oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one d> AT3G06300 (AT-P4H-2) mRNA, complete cds Length = 1062 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 494 tggaagtaatcaaagtgaggttcatatttctg 525 |||||||| |||||||||| ||||||||||| Sbjct: 464 tggaagtagtcaaagtgagcatcatatttctg 433
>ref|XM_476973.1| Oryza sativa (japonica cultivar-group), mRNA Length = 942 Score = 40.1 bits (20), Expect = 8.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 215 gaccatttgtcaccttttatcactggacatccaccatggaggct 258 |||||||| ||||||| ||||||||| || | ||||||||||| Sbjct: 746 gaccatttttcaccttctatcactgggcagctcccatggaggct 703
>gb|AC104196.8| Mus musculus chromosome 5, clone RP24-239K15, complete sequence Length = 160345 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 582 tgaaatctgatattcttttctcaa 605 ||||||||| |||||||||||||| Sbjct: 78291 tgaaatctggtattcttttctcaa 78268
>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete sequence Length = 1507550 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 21 tgtacaacaaggtgaccaagacaaagcc 48 |||| ||| ||||||||||||||||||| Sbjct: 874600 tgtagaactaggtgaccaagacaaagcc 874573
>gb|AC138110.3| Mus musculus BAC clone RP24-363O16 from chromosome 1, complete sequence Length = 158654 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 582 tgaaatctgatattcttttctcaa 605 ||||| |||||||||||||||||| Sbjct: 148337 tgaaacctgatattcttttctcaa 148314
>ref|NM_025534.2| Mus musculus coiled-coil domain containing 82 (Ccdc82), mRNA Length = 4665 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 aactttagcagaaggaaaca 407 |||||||||||||||||||| Sbjct: 4480 aactttagcagaaggaaaca 4461
>ref|XM_570855.1| Cryptococcus neoformans var. neoformans JEC21 UVSB PI-3 kinase (CNE03070) partial mRNA Length = 5635 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 21 tgtacaacaaggtgaccaagacaaagcc 48 |||| ||| ||||||||||||||||||| Sbjct: 1143 tgtagaactaggtgaccaagacaaagcc 1170
>gb|AC011623.5|ATAC011623 Arabidopsis thaliana chromosome III BAC F24P17 genomic sequence, complete sequence Length = 86022 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 494 tggaagtaatcaaagtgaggttcatatttctg 525 |||||||| |||||||||| ||||||||||| Sbjct: 83312 tggaagtagtcaaagtgagcatcatatttctg 83343
>gb|AC018907.5|ATAC018907 Arabidopsis thaliana chromosome III BAC F28L1 genomic sequence, complete sequence Length = 93478 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 494 tggaagtaatcaaagtgaggttcatatttctg 525 |||||||| |||||||||| ||||||||||| Sbjct: 75177 tggaagtagtcaaagtgagcatcatatttctg 75146
>gb|AC124689.5| Mus musculus BAC clone RP24-147N6 from chromosome 6, complete sequence Length = 187752 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cctcatgctccagaaaagta 302 |||||||||||||||||||| Sbjct: 59869 cctcatgctccagaaaagta 59888
>gb|AC125279.1| Mus musculus BAC clone RP23-433F5 from 8, complete sequence Length = 201197 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 ggtgaccaagacaaagcctt 50 |||||||||||||||||||| Sbjct: 68570 ggtgaccaagacaaagcctt 68589
>gb|AC099618.4| Mus musculus chromosome 1, clone RP23-455H15, complete sequence Length = 171215 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 582 tgaaatctgatattcttttctcaa 605 ||||| |||||||||||||||||| Sbjct: 157254 tgaaacctgatattcttttctcaa 157277
>gb|BC098496.1| Mus musculus coiled-coil domain containing 82, mRNA (cDNA clone MGC:107477 IMAGE:30089818), complete cds Length = 4746 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 aactttagcagaaggaaaca 407 |||||||||||||||||||| Sbjct: 4407 aactttagcagaaggaaaca 4388
>gb|BC057326.1| Mus musculus coiled-coil domain containing 82, mRNA (cDNA clone MGC:66886 IMAGE:6826080), complete cds Length = 4665 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 aactttagcagaaggaaaca 407 |||||||||||||||||||| Sbjct: 4480 aactttagcagaaggaaaca 4461
>gb|BC040405.1| Mus musculus coiled-coil domain containing 82, mRNA (cDNA clone IMAGE:4014849), with apparent retained intron Length = 3856 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 aactttagcagaaggaaaca 407 |||||||||||||||||||| Sbjct: 3642 aactttagcagaaggaaaca 3623
>gb|BC020485.1| Mus musculus, clone IMAGE:3707784, mRNA Length = 1836 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 aactttagcagaaggaaaca 407 |||||||||||||||||||| Sbjct: 1665 aactttagcagaaggaaaca 1646
>gb|AY128940.1| Arabidopsis thaliana unknown protein (At5g18900) mRNA, complete cds Length = 998 Score = 40.1 bits (20), Expect = 8.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 215 gaccatttgtcaccttttatcactggacatccaccatggaggct 258 |||||||| || |||| |||||| ||||||||||| || ||||| Sbjct: 713 gaccatttctctccttctatcacaggacatccaccgtgaaggct 670
>gb|AY093039.1| Arabidopsis thaliana unknown protein (At5g18900) mRNA, complete cds Length = 1116 Score = 40.1 bits (20), Expect = 8.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 215 gaccatttgtcaccttttatcactggacatccaccatggaggct 258 |||||||| || |||| |||||| ||||||||||| || ||||| Sbjct: 762 gaccatttctctccttctatcacaggacatccaccgtgaaggct 719
>gb|AC008949.9| Homo sapiens chromosome 5 clone CTD-2335O24, complete sequence Length = 163731 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cacatatttagtaactggtg 143 |||||||||||||||||||| Sbjct: 29148 cacatatttagtaactggtg 29129
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 215 gaccatttgtcaccttttatcactggacatccaccatggaggct 258 |||||||| ||||||| ||||||||| || | ||||||||||| Sbjct: 5149135 gaccatttttcaccttctatcactgggcagctcccatggaggct 5149178
>emb|BX829782.1|CNS0A19T Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB36ZG12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1082 Score = 40.1 bits (20), Expect = 8.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 215 gaccatttgtcaccttttatcactggacatccaccatggaggct 258 |||||||| || |||| |||||| ||||||||||| || ||||| Sbjct: 746 gaccatttctctccttctatcacaggacatccaccgtgaaggct 703
>gb|AC155811.2| Mus musculus BAC clone RP24-185C13 from chromosome 12, complete sequence Length = 152790 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 atttttggtgttgaaatcat 491 |||||||||||||||||||| Sbjct: 66747 atttttggtgttgaaatcat 66728
>gb|AY088813.1| Arabidopsis thaliana clone 95931 mRNA, complete sequence Length = 1049 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 494 tggaagtaatcaaagtgaggttcatatttctg 525 |||||||| |||||||||| ||||||||||| Sbjct: 452 tggaagtagtcaaagtgagcatcatatttctg 421
>gb|AY087708.1| Arabidopsis thaliana clone 37828 mRNA, complete sequence Length = 1187 Score = 40.1 bits (20), Expect = 8.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 215 gaccatttgtcaccttttatcactggacatccaccatggaggct 258 |||||||| || |||| |||||| ||||||||||| || ||||| Sbjct: 833 gaccatttctctccttctatcacaggacatccaccgtgaaggct 790
>gb|AC068655.3|AC068655 Genomic Sequence For Arabidopsis thaliana Clone F17K4 From Chromosome V, complete sequence Length = 89453 Score = 40.1 bits (20), Expect = 8.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 215 gaccatttgtcaccttttatcactggacatccaccatggaggct 258 |||||||| || |||| |||||| ||||||||||| || ||||| Sbjct: 31694 gaccatttctctccttctatcacaggacatccaccgtgaaggct 31651
>dbj|AP003848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1715_A07 Length = 130907 Score = 40.1 bits (20), Expect = 8.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 215 gaccatttgtcaccttttatcactggacatccaccatggaggct 258 |||||||| ||||||| ||||||||| || | ||||||||||| Sbjct: 15849 gaccatttttcaccttctatcactgggcagctcccatggaggct 15892
>dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, complete sequence Length = 256992 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 tggagaacctgaaggccctc 558 |||||||||||||||||||| Sbjct: 197998 tggagaacctgaaggccctc 198017
>dbj|AP003743.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_E12 Length = 119691 Score = 40.1 bits (20), Expect = 8.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 215 gaccatttgtcaccttttatcactggacatccaccatggaggct 258 |||||||| ||||||| ||||||||| || | ||||||||||| Sbjct: 105302 gaccatttttcaccttctatcactgggcagctcccatggaggct 105345
>dbj|AK121816.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098K22, full insert sequence Length = 1126 Score = 40.1 bits (20), Expect = 8.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 215 gaccatttgtcaccttttatcactggacatccaccatggaggct 258 |||||||| ||||||| ||||||||| || | ||||||||||| Sbjct: 824 gaccatttttcaccttctatcactgggcagctcccatggaggct 781
>gb|AC008160.11|AC008160 Mus musculus, clone 187_J_17, complete sequence Length = 206383 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cctcatgctccagaaaagta 302 |||||||||||||||||||| Sbjct: 62888 cctcatgctccagaaaagta 62869
>emb|AL671977.8| Mouse DNA sequence from clone RP23-171A16 on chromosome X, complete sequence Length = 193108 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 ctcattataaaatggtattg 377 |||||||||||||||||||| Sbjct: 163915 ctcattataaaatggtattg 163896 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,738,590 Number of Sequences: 3902068 Number of extensions: 5738590 Number of successful extensions: 100343 Number of sequences better than 10.0: 88 Number of HSP's better than 10.0 without gapping: 88 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 99990 Number of HSP's gapped (non-prelim): 342 length of query: 629 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 606 effective length of database: 17,143,297,704 effective search space: 10388838408624 effective search space used: 10388838408624 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)