>PICA_DROME (Q9VI75) Phosphatidylinositol-binding clathrin assembly protein LAP|
           (Like-AP180)
          Length = 468

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
 Frame = +3

Query: 369 IVSLLYMYFKRNRYHAHSALDA----LVSSDHLRTFLTSSTNCALLEGSI 506
           I++LL  YF  N+ HA  ALD     LV  D +  FL  + N  + +G I
Sbjct: 229 IINLLEKYFDMNKKHARDALDLYKKFLVRMDRVGEFLKVAENVGIDKGDI 278

>COIA1_MOUSE (P39061) Collagen alpha-1(XVIII) chain precursor [Contains:|
            Endostatin]
          Length = 1774

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
 Frame = +2

Query: 287  SSNNGRRLQTSFTKQWLTQISYGRLQPNSIPSIYVLQEKPISC--TFCIGCV 436
            S  +GRRL  S+ + W T+ +    Q +S+ S  +L++K  SC  ++ + C+
Sbjct: 1713 SDPSGRRLMESYCETWRTETTGATGQASSLLSGRLLEQKAASCHNSYIVLCI 1764

>UBR1_HUMAN (Q8IWV7) Ubiquitin-protein ligase E3 component N-recognin-1 (EC|
           6.-.-.-) (Ubiquitin-protein ligase E3-alpha-1)
           (Ubiquitin-protein ligase E3-alpha-I)
          Length = 1749

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 17/64 (26%), Positives = 32/64 (50%)
 Frame = +3

Query: 396 KRNRYHAHSALDALVSSDHLRTFLTSSTNCALLEGSIFSSSIERPCGKACRSGLESATSE 575
           K  RY+     D   S DH+   L  + +C L E  + +++I++   +A ++G  +A  E
Sbjct: 222 KNERYYCVLFNDEHHSYDHVIYSLQRALDCELAEAQLHTTAIDKEGRRAVKAGAYAACQE 281

Query: 576 SN*D 587
           +  D
Sbjct: 282 AKED 285

>CYSK2_SCHPO (P87131) Cysteine synthase 2 (EC 2.5.1.47) (O-acetylserine|
           sulfhydrylase 2) (O-acetylserine (Thiol)-lyase 2) (CSase
           2)
          Length = 395

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -2

Query: 617 VYQRTQGSKGISVALRCCRL 558
           VY+ T GS GIS+A+ CC L
Sbjct: 108 VYEGTAGSTGISIAMLCCSL 127

>ATG13_CANAL (Q5A1Z5) Autophagy-related protein 13|
          Length = 761

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
 Frame = +2

Query: 89  SHSYSRV-NTRITSRDYSITRLNNSR-SPVFLPTVAHPPPAFISNLLEA*LTHPTTLINH 262
           S+S+SR+ + R  S D+  T+ + +R S    PT A P      + + + + H TT+I+ 
Sbjct: 595 SYSHSRMKDARPRSEDHQQTKFSAARRSSNISPTTAVPSSIGTPSSISSRIPHVTTIISS 654

Query: 263 SEKPKAGCSSNNGRRLQTSFT 325
           S+      SS  G R +++ T
Sbjct: 655 SD-----VSSTGGNRTKSAAT 670


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,692,305
Number of Sequences: 219361
Number of extensions: 2075307
Number of successful extensions: 5443
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5424
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6541540170
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)