ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags30m06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_185281.1| Oryza sativa (japonica cultivar-group), predic... 375 e-100
2dbj|AK062718.1| Oryza sativa (japonica cultivar-group) cDNA clon... 375 e-100
3gb|AY111286.1| Zea mays CL10549_1 mRNA sequence 297 3e-77
4gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome... 131 3e-27
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
6gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome... 131 3e-27
7gb|AC155335.1| Brassica rapa subsp. pekinensis chromosome Cytoge... 56 2e-04
8gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genom... 52 0.003
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 52 0.003
10gb|AC167227.1| Oryza sativa (japonica cultivar-group) chromosome... 52 0.003
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.003
12gb|AC160949.1| Oryza sativa (japonica cultivar-group) BAC clone ... 52 0.003
13dbj|AK101901.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.003
14ref|NM_116125.2| Arabidopsis thaliana heat shock protein binding... 50 0.010
15emb|AL162651.1|ATF26K9 Arabidopsis thaliana DNA chromosome 3, BA... 50 0.010
16gb|AY125534.1| Arabidopsis thaliana At3g62600/F26K9_30 mRNA, com... 50 0.010
17gb|AY094429.1| Arabidopsis thaliana AT3g62600/F26K9_30 mRNA, com... 50 0.010
18gb|AY087640.1| Arabidopsis thaliana clone 37292 mRNA, complete s... 50 0.010
19emb|AL096792.5|HS1067P23 Human DNA sequence from clone RP5-1067P... 48 0.039
20gb|AC146947.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.61
21gb|AC138595.10| Mus musculus chromosome 1, clone RP24-286D13, co... 44 0.61
22gb|DQ440287.1| Aedes aegypti clone AET-365 molecular chaperone m... 44 0.61
23gb|AF312994.1|AF312994 Mus musculus chromosome 1 clone MML, comp... 44 0.61
24dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.61
25gb|AF239932.1|AF239932 Euphorbia esula DnaJ protein mRNA, comple... 44 0.61
26gb|AF085275.1|AF085275 Hevea brasiliensis DnaJ protein mRNA, com... 44 0.61
27gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.61
28emb|AJ297131.1|MMAJ2971 Mus musculus SIL, MAP_17, CYP_a, SCL & C... 44 0.61
29emb|AL645473.12| Mouse DNA sequence from clone RP23-246H17 on ch... 44 0.61
30emb|AL731651.1| Mouse DNA sequence from clone XX-PAC129 on chrom... 44 0.61
31gb|CP000264.1| Jannaschia sp. CCS1, complete genome 42 2.4
32emb|AL590444.1|CNS07EGB chromosome IV of strain GB-M1 of Encepha... 42 2.4
33gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 9.6
34gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 40 9.6
35gb|AC135359.2| Mus musculus BAC clone RP24-209E17 from chromosom... 40 9.6
36gb|AC005105.3| Homo sapiens BAC clone CTA-491N20 from 7, complet... 40 9.6
37emb|BX890590.11| Zebrafish DNA sequence from clone DKEY-15H19 in... 40 9.6
38ref|XM_567811.1| Cryptococcus neoformans var. neoformans JEC21 p... 40 9.6
39gb|AC132264.3| Mus musculus BAC clone RP24-371N18 from chromosom... 40 9.6
40gb|AC124720.3| Mus musculus BAC clone RP23-387F14 from chromosom... 40 9.6
41gb|AC116999.2| Mus musculus BAC clone RP23-28L10 from 19, comple... 40 9.6
42gb|AC145329.35| Medicago truncatula clone mth2-8i21, complete se... 40 9.6
43emb|AL392087.7| Human DNA sequence from clone RP11-454H24 on chr... 40 9.6
44emb|AL355795.13| Human DNA sequence from clone RP4-668G5 on chro... 40 9.6
45emb|AL118513.17|HSDJ685L9 Human DNA sequence from clone RP4-685L... 40 9.6
46emb|AL109613.11|HS1033H22 Human DNA sequence from clone RP5-1033... 40 9.6
47gb|AC157769.3| Mus musculus chromosome 1, clone RP24-314L7, comp... 40 9.6
48gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 9.6
49gb|AC012558.9| Homo sapiens chromosome 10 clone RP11-174J11, com... 40 9.6
50gb|AC099792.2| Homo sapiens chromosome 1 clone RP11-436K8, compl... 40 9.6
51gb|AC138023.2| Homo sapiens chromosome 3 clone RP11-7G8, complet... 40 9.6
52gb|AC026205.6|AC026205 Homo sapiens chromosome 3 clone RP11-61I9... 40 9.6
53emb|BX004969.5| Zebrafish DNA sequence from clone CH211-89C12 in... 40 9.6
54emb|AL845516.8| Zebrafish DNA sequence from clone DKEY-43F11, co... 40 9.6
55gb|AC002526.1|AC002526 Human PAC clone RP4-558L21 from Xq23, com... 40 9.6
56emb|Z16559.1|HS095WC9 H. sapiens (D1S203) DNA segment containing... 40 9.6
57gb|AC005873.3|AC005873 citb_15_o_21, complete sequence 40 9.6
58gb|AC154015.3| Mus musculus 6 BAC RP24-194J12 (Roswell Park Canc... 40 9.6
59emb|BX005402.7| Zebrafish DNA sequence from clone DKEY-237J11, c... 40 9.6
60gb|AC122860.5| Mus musculus BAC clone RP23-135A22 from 12, compl... 40 9.6
61emb|AL772291.9| Mouse DNA sequence from clone RP23-395G1 on chro... 40 9.6
62gb|AC026167.5| Homo sapiens chromosome 3 clone RP11-140B10 map 3... 40 9.6 
>ref|NM_185281.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1044

 Score =  375 bits (189), Expect = e-100
 Identities = 364/421 (86%), Gaps = 1/421 (0%)
 Strand = Plus / Minus

                                                                        
Query: 281  cttcagcttggccttctggtcgtccgtcagagttttcgggaacaacacctcgaatgtcac 340
            ||||||||||| |||||||||||| || || ||||||||||| || |||||||| || ||
Sbjct: 1029 cttcagcttggacttctggtcgtcggttagggttttcgggaataaaacctcgaaagttac 970

                                                                        
Query: 341  atacagatcgcctttcttgttgctttggtgcaatggcatgccctctcctttgaatttcct 400
            ||| || ||||||||||||||||| |||| ||||||||| || || |||||||| |||||
Sbjct: 969  atataggtcgcctttcttgttgctctggtacaatggcattccttcccctttgaacttcct 910

                                                                        
Query: 401  tacctccttgggcttggtaacaccctgcgagccgatttggaccaaatggttgtcaagatg 460
             ||||||||||| ||||| |  ||||  | ||| ||||  |||| ||| ||||| |||||
Sbjct: 909  aacctccttgggtttggtgatccccttggtgccaatttccaccatatgattgtccagatg 850

                                                                        
Query: 461  cttgaggttcttctcgaatccaaccagagcttggagcagggagattgtaactgttgcatg 520
            ||| | | |||||||||| || ||||||||||||||||||||||||||||| ||||  ||
Sbjct: 849  cttaatggtcttctcgaagccgaccagagcttggagcagggagattgtaacagttgtgtg 790

                                                                        
Query: 521  tagatcgttgccttctcttctgaagcggtcatgtggtgctgtccgaatcctgaacttcaa 580
             || || ||||||||||||||||| || |||||||||||||| || ||||| ||||||||
Sbjct: 789  caggtcattgccttctcttctgaatcgctcatgtggtgctgttcggatcctaaacttcaa 730

                                                                        
Query: 581  gtctccaggttctccatcaatcttaggctctccttcctcgaaaaatgaaacctcctgtcc 640
             ||||||||||| |||||||||||||||||||||||||| || |||||||| ||||| ||
Sbjct: 729  atctccaggttcaccatcaatcttaggctctccttcctcaaagaatgaaacttcctgccc 670

                                                                        
Query: 641  atcttgcatacccttctcaatatcaacggtcaaaaaatcacctttctcgtacatacttca 700
            ||||||||| || |||||||||||||| |||||||||||||| |||||| ||||||||||
Sbjct: 669  atcttgcattcctttctcaatatcaacagtcaaaaaatcacc-ttctcgcacatacttca 611

             
Query: 701  c 701
            |
Sbjct: 610  c 610
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>dbj|AK062718.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-C11, full
           insert sequence
          Length = 827

 Score =  375 bits (189), Expect = e-100
 Identities = 364/421 (86%), Gaps = 1/421 (0%)
 Strand = Plus / Minus

                                                                       
Query: 281 cttcagcttggccttctggtcgtccgtcagagttttcgggaacaacacctcgaatgtcac 340
           ||||||||||| |||||||||||| || || ||||||||||| || |||||||| || ||
Sbjct: 428 cttcagcttggacttctggtcgtcggttagggttttcgggaataaaacctcgaaagttac 369

                                                                       
Query: 341 atacagatcgcctttcttgttgctttggtgcaatggcatgccctctcctttgaatttcct 400
           ||| || ||||||||||||||||| |||| ||||||||| || || |||||||| |||||
Sbjct: 368 atataggtcgcctttcttgttgctctggtacaatggcattccttcccctttgaacttcct 309

                                                                       
Query: 401 tacctccttgggcttggtaacaccctgcgagccgatttggaccaaatggttgtcaagatg 460
            ||||||||||| ||||| |  ||||  | ||| ||||  |||| ||| ||||| |||||
Sbjct: 308 aacctccttgggtttggtgatccccttggtgccaatttccaccatatgattgtccagatg 249

                                                                       
Query: 461 cttgaggttcttctcgaatccaaccagagcttggagcagggagattgtaactgttgcatg 520
           ||| | | |||||||||| || ||||||||||||||||||||||||||||| ||||  ||
Sbjct: 248 cttaatggtcttctcgaagccgaccagagcttggagcagggagattgtaacagttgtgtg 189

                                                                       
Query: 521 tagatcgttgccttctcttctgaagcggtcatgtggtgctgtccgaatcctgaacttcaa 580
            || || ||||||||||||||||| || |||||||||||||| || ||||| ||||||||
Sbjct: 188 caggtcattgccttctcttctgaatcgctcatgtggtgctgttcggatcctaaacttcaa 129

                                                                       
Query: 581 gtctccaggttctccatcaatcttaggctctccttcctcgaaaaatgaaacctcctgtcc 640
            ||||||||||| |||||||||||||||||||||||||| || |||||||| ||||| ||
Sbjct: 128 atctccaggttcaccatcaatcttaggctctccttcctcaaagaatgaaacttcctgccc 69

                                                                       
Query: 641 atcttgcatacccttctcaatatcaacggtcaaaaaatcacctttctcgtacatacttca 700
           ||||||||| || |||||||||||||| |||||||||||||| |||||| ||||||||||
Sbjct: 68  atcttgcattcctttctcaatatcaacagtcaaaaaatcacc-ttctcgcacatacttca 10

            
Query: 701 c 701
           |
Sbjct: 9   c 9
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>gb|AY111286.1| Zea mays CL10549_1 mRNA sequence
          Length = 1211

 Score =  297 bits (150), Expect = 3e-77
 Identities = 337/401 (84%)
 Strand = Plus / Plus

                                                                       
Query: 273 agaacatccttcagcttggccttctggtcgtccgtcagagttttcgggaacaacacctcg 332
           ||||||||||| |||||||||||||||||  | || || ||||||||||| |||||||||
Sbjct: 302 agaacatccttaagcttggccttctggtcagcggttagggttttcgggaataacacctcg 361

                                                                       
Query: 333 aatgtcacatacagatcgcctttcttgttgctttggtgcaatggcatgccctctcctttg 392
           |||||||||||||| || |||||||||||||||||||  | ||||||||| || ||||||
Sbjct: 362 aatgtcacatacaggtcacctttcttgttgctttggtatagtggcatgccttcacctttg 421

                                                                       
Query: 393 aatttccttacctccttgggcttggtaacaccctgcgagccgatttggaccaaatggttg 452
           || ||||| | |||||| || ||||| |  ||||  | ||| ||||  |||| |||||||
Sbjct: 422 aacttcctgatctccttcggtttggtgatgcccttggtgccaatttctaccagatggttg 481

                                                                       
Query: 453 tcaagatgcttgaggttcttctcgaatccaaccagagcttggagcagggagattgtaact 512
           |||||||||||||   |||||||||| |||||||||||||| |||||||| |||||||||
Sbjct: 482 tcaagatgcttgattgtcttctcgaaaccaaccagagcttgcagcagggatattgtaact 541

                                                                       
Query: 513 gttgcatgtagatcgttgccttctcttctgaagcggtcatgtggtgctgtccgaatcctg 572
           |||||||| || || |||||||||| | ||||| ||   |||  |||||| || ||||||
Sbjct: 542 gttgcatgcaggtcattgccttctcgtttgaagtggctgtgtaatgctgttcggatcctg 601

                                                                       
Query: 573 aacttcaagtctccaggttctccatcaatcttaggctctccttcctcgaaaaatgaaacc 632
           |||||||| || || ||||| ||||||||||||||||| |||||||||       |||||
Sbjct: 602 aacttcaaatcgcctggttcgccatcaatcttaggctcgccttcctcgnnnnncaaaacc 661

                                                    
Query: 633 tcctgtccatcttgcatacccttctcaatatcaacggtcaa 673
           |||||| |||||| ||| ||||||||||||||||| |||||
Sbjct: 662 tcctgtgcatctttcattcccttctcaatatcaacagtcaa 702



 Score = 48.1 bits (24), Expect = 0.039
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 178 gcttcttcctatgcaagctacttggaaaattt 209
           ||||||||||||||||||||||  ||||||||
Sbjct: 210 gcttcttcctatgcaagctactccgaaaattt 241
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>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05,
              complete sequence
          Length = 145044

 Score =  131 bits (66), Expect = 3e-27
 Identities = 120/138 (86%)
 Strand = Plus / Minus

                                                                          
Query: 281    cttcagcttggccttctggtcgtccgtcagagttttcgggaacaacacctcgaatgtcac 340
              ||||||||||| |||||||||||| || || ||||||||||| || |||||||| || ||
Sbjct: 124627 cttcagcttggacttctggtcgtcggttagggttttcgggaataaaacctcgaaagttac 124568

                                                                          
Query: 341    atacagatcgcctttcttgttgctttggtgcaatggcatgccctctcctttgaatttcct 400
              ||| || ||||||||||||||||| |||| ||||||||| || || |||||||| |||||
Sbjct: 124567 atataggtcgcctttcttgttgctctggtacaatggcattccttcccctttgaacttcct 124508

                                
Query: 401    tacctccttgggcttggt 418
               ||||||||||| |||||
Sbjct: 124507 aacctccttgggtttggt 124490



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 58/63 (92%)
 Strand = Plus / Minus

                                                                          
Query: 575    cttcaagtctccaggttctccatcaatcttaggctctccttcctcgaaaaatgaaacctc 634
              |||||| ||||||||||| |||||||||||||||||||||||||| || |||||||| ||
Sbjct: 123717 cttcaaatctccaggttcaccatcaatcttaggctctccttcctcaaagaatgaaacttc 123658

                 
Query: 635    ctg 637
              |||
Sbjct: 123657 ctg 123655



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 62/68 (91%), Gaps = 1/68 (1%)
 Strand = Plus / Minus

                                                                          
Query: 634    cctgtccatcttgcatacccttctcaatatcaacggtcaaaaaatcacctttctcgtaca 693
              |||| ||||||||||| || |||||||||||||| |||||||||||||| |||||| |||
Sbjct: 123107 cctgcccatcttgcattcctttctcaatatcaacagtcaaaaaatcacc-ttctcgcaca 123049

                      
Query: 694    tacttcac 701
              ||||||||
Sbjct: 123048 tacttcac 123041



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                          
Query: 497    cagggagattgtaactgttgcatgtagatcgttgccttctcttctgaagcggtcatgtgg 556
              ||||||||||||||| ||||  || || || ||||||||||||||||| || ||||||||
Sbjct: 123891 cagggagattgtaacagttgtgtgcaggtcattgccttctcttctgaatcgctcatgtgg 123832

                                  
Query: 557    tgctgtccgaatcctgaact 576
              |||||| || ||||| ||||
Sbjct: 123831 tgctgttcggatcctaaact 123812



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                       
Query: 441    accaaatggttgtcaagatgcttgaggttcttctcgaatccaaccagagcttggagc 497
              |||| ||| ||||| |||||||| | | |||||||||| || |||||||||||||||
Sbjct: 124359 accatatgattgtccagatgcttaatggtcttctcgaagccgaccagagcttggagc 124303
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  131 bits (66), Expect = 3e-27
 Identities = 120/138 (86%)
 Strand = Plus / Minus

                                                                           
Query: 281     cttcagcttggccttctggtcgtccgtcagagttttcgggaacaacacctcgaatgtcac 340
               ||||||||||| |||||||||||| || || ||||||||||| || |||||||| || ||
Sbjct: 3246910 cttcagcttggacttctggtcgtcggttagggttttcgggaataaaacctcgaaagttac 3246851

                                                                           
Query: 341     atacagatcgcctttcttgttgctttggtgcaatggcatgccctctcctttgaatttcct 400
               ||| || ||||||||||||||||| |||| ||||||||| || || |||||||| |||||
Sbjct: 3246850 atataggtcgcctttcttgttgctctggtacaatggcattccttcccctttgaacttcct 3246791

                                 
Query: 401     tacctccttgggcttggt 418
                ||||||||||| |||||
Sbjct: 3246790 aacctccttgggtttggt 3246773



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 58/63 (92%)
 Strand = Plus / Minus

                                                                           
Query: 575     cttcaagtctccaggttctccatcaatcttaggctctccttcctcgaaaaatgaaacctc 634
               |||||| ||||||||||| |||||||||||||||||||||||||| || |||||||| ||
Sbjct: 3246000 cttcaaatctccaggttcaccatcaatcttaggctctccttcctcaaagaatgaaacttc 3245941

                  
Query: 635     ctg 637
               |||
Sbjct: 3245940 ctg 3245938



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 62/68 (91%), Gaps = 1/68 (1%)
 Strand = Plus / Minus

                                                                           
Query: 634     cctgtccatcttgcatacccttctcaatatcaacggtcaaaaaatcacctttctcgtaca 693
               |||| ||||||||||| || |||||||||||||| |||||||||||||| |||||| |||
Sbjct: 3245390 cctgcccatcttgcattcctttctcaatatcaacagtcaaaaaatcacc-ttctcgcaca 3245332

                       
Query: 694     tacttcac 701
               ||||||||
Sbjct: 3245331 tacttcac 3245324



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                           
Query: 497     cagggagattgtaactgttgcatgtagatcgttgccttctcttctgaagcggtcatgtgg 556
               ||||||||||||||| ||||  || || || ||||||||||||||||| || ||||||||
Sbjct: 3246174 cagggagattgtaacagttgtgtgcaggtcattgccttctcttctgaatcgctcatgtgg 3246115

                                   
Query: 557     tgctgtccgaatcctgaact 576
               |||||| || ||||| ||||
Sbjct: 3246114 tgctgttcggatcctaaact 3246095



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                        
Query: 441     accaaatggttgtcaagatgcttgaggttcttctcgaatccaaccagagcttggagc 497
               |||| ||| ||||| |||||||| | | |||||||||| || |||||||||||||||
Sbjct: 3246642 accatatgattgtccagatgcttaatggtcttctcgaagccgaccagagcttggagc 3246586
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>gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0676G05,
             complete sequence
          Length = 167317

 Score =  131 bits (66), Expect = 3e-27
 Identities = 120/138 (86%)
 Strand = Plus / Minus

                                                                         
Query: 281   cttcagcttggccttctggtcgtccgtcagagttttcgggaacaacacctcgaatgtcac 340
             ||||||||||| |||||||||||| || || ||||||||||| || |||||||| || ||
Sbjct: 40734 cttcagcttggacttctggtcgtcggttagggttttcgggaataaaacctcgaaagttac 40675

                                                                         
Query: 341   atacagatcgcctttcttgttgctttggtgcaatggcatgccctctcctttgaatttcct 400
             ||| || ||||||||||||||||| |||| ||||||||| || || |||||||| |||||
Sbjct: 40674 atataggtcgcctttcttgttgctctggtacaatggcattccttcccctttgaacttcct 40615

                               
Query: 401   tacctccttgggcttggt 418
              ||||||||||| |||||
Sbjct: 40614 aacctccttgggtttggt 40597



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 58/63 (92%)
 Strand = Plus / Minus

                                                                         
Query: 575   cttcaagtctccaggttctccatcaatcttaggctctccttcctcgaaaaatgaaacctc 634
             |||||| ||||||||||| |||||||||||||||||||||||||| || |||||||| ||
Sbjct: 39824 cttcaaatctccaggttcaccatcaatcttaggctctccttcctcaaagaatgaaacttc 39765

                
Query: 635   ctg 637
             |||
Sbjct: 39764 ctg 39762



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 62/68 (91%), Gaps = 1/68 (1%)
 Strand = Plus / Minus

                                                                         
Query: 634   cctgtccatcttgcatacccttctcaatatcaacggtcaaaaaatcacctttctcgtaca 693
             |||| ||||||||||| || |||||||||||||| |||||||||||||| |||||| |||
Sbjct: 39214 cctgcccatcttgcattcctttctcaatatcaacagtcaaaaaatcacc-ttctcgcaca 39156

                     
Query: 694   tacttcac 701
             ||||||||
Sbjct: 39155 tacttcac 39148



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                         
Query: 497   cagggagattgtaactgttgcatgtagatcgttgccttctcttctgaagcggtcatgtgg 556
             ||||||||||||||| ||||  || || || ||||||||||||||||| || ||||||||
Sbjct: 39998 cagggagattgtaacagttgtgtgcaggtcattgccttctcttctgaatcgctcatgtgg 39939

                                 
Query: 557   tgctgtccgaatcctgaact 576
             |||||| || ||||| ||||
Sbjct: 39938 tgctgttcggatcctaaact 39919



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                      
Query: 441   accaaatggttgtcaagatgcttgaggttcttctcgaatccaaccagagcttggagc 497
             |||| ||| ||||| |||||||| | | |||||||||| || |||||||||||||||
Sbjct: 40466 accatatgattgtccagatgcttaatggtcttctcgaagccgaccagagcttggagc 40410
to top
>gb|AC155335.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1
            clone KBrH001H24, complete sequence
          Length = 118144

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                        
Query: 519  tgtagatcgttgccttctcttctgaagcggtcatgtggtgctgt 562
            |||||||||||||| ||||| ||||| ||| |||||||||||||
Sbjct: 7379 tgtagatcgttgccatctctcctgaaccgggcatgtggtgctgt 7422
to top
>gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genomic sequence, complete
              sequence
          Length = 132981

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                
Query: 640    catcttgcatacccttctcaatatcaacggtcaa 673
              |||||||||| ||||||||||||||||| |||||
Sbjct: 111130 catcttgcattcccttctcaatatcaactgtcaa 111163
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                  
Query: 640      catcttgcatacccttctcaatatcaacggtcaa 673
                |||||||||| ||||||||||||||||| |||||
Sbjct: 18206145 catcttgcattcccttctcaatatcaactgtcaa 18206178
to top
>gb|AC167227.1| Oryza sativa (japonica cultivar-group) chromosome unknown clone
             OSJNBb0026K11, complete sequence
          Length = 129643

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                               
Query: 640   catcttgcatacccttctcaatatcaacggtcaa 673
             |||||||||| ||||||||||||||||| |||||
Sbjct: 95597 catcttgcattcccttctcaatatcaacagtcaa 95630



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                               
Query: 640   catcttgcatacccttctcaatatcaacggtcaa 673
             |||||||||| ||||||||||||||||| |||||
Sbjct: 52180 catcttgcattcccttctcaatatcaacagtcaa 52213
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                  
Query: 640      catcttgcatacccttctcaatatcaacggtcaa 673
                |||||||||| ||||||||||||||||| |||||
Sbjct: 18199686 catcttgcattcccttctcaatatcaactgtcaa 18199719
to top
>gb|AC160949.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0006E22, complete
              sequence
          Length = 128256

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                
Query: 640    catcttgcatacccttctcaatatcaacggtcaa 673
              |||||||||| ||||||||||||||||| |||||
Sbjct: 111898 catcttgcattcccttctcaatatcaacagtcaa 111931
to top
>dbj|AK101901.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071C01, full
           insert sequence
          Length = 623

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 640 catcttgcatacccttctcaatatcaacggtcaa 673
           |||||||||| ||||||||||||||||| |||||
Sbjct: 461 catcttgcattcccttctcaatatcaactgtcaa 428
to top
>ref|NM_116125.2| Arabidopsis thaliana heat shock protein binding / unfolded protein
           binding AT3G62600 mRNA, complete cds
          Length = 1453

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 519 tgtagatcgttgccttctcttctgaagcggtcatgtggtgc 559
           |||||||||||||| || |||||||| ||| ||||||||||
Sbjct: 952 tgtagatcgttgccatcccttctgaaacgggcatgtggtgc 912
to top
>emb|AL162651.1|ATF26K9 Arabidopsis thaliana DNA chromosome 3, BAC clone F26K9
          Length = 110257

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                     
Query: 519  tgtagatcgttgccttctcttctgaagcggtcatgtggtgc 559
            |||||||||||||| || |||||||| ||| ||||||||||
Sbjct: 4458 tgtagatcgttgccatcccttctgaaacgggcatgtggtgc 4498
to top
>gb|AY125534.1| Arabidopsis thaliana At3g62600/F26K9_30 mRNA, complete cds
          Length = 1041

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 519 tgtagatcgttgccttctcttctgaagcggtcatgtggtgc 559
           |||||||||||||| || |||||||| ||| ||||||||||
Sbjct: 788 tgtagatcgttgccatcccttctgaaacgggcatgtggtgc 748
to top
>gb|AY094429.1| Arabidopsis thaliana AT3g62600/F26K9_30 mRNA, complete cds
          Length = 1365

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 519 tgtagatcgttgccttctcttctgaagcggtcatgtggtgc 559
           |||||||||||||| || |||||||| ||| ||||||||||
Sbjct: 921 tgtagatcgttgccatcccttctgaaacgggcatgtggtgc 881
to top
>gb|AY087640.1| Arabidopsis thaliana clone 37292 mRNA, complete sequence
          Length = 1352

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 519 tgtagatcgttgccttctcttctgaagcggtcatgtggtgc 559
           |||||||||||||| || |||||||| ||| ||||||||||
Sbjct: 952 tgtagatcgttgccatcccttctgaaacgggcatgtggtgc 912
to top
>emb|AL096792.5|HS1067P23 Human DNA sequence from clone RP5-1067P23 on chromosome 20 Contains
             STSs and GSSs, complete sequence
          Length = 101342

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 110   aaaaattgagcagttaatattacc 133
             ||||||||||||||||||||||||
Sbjct: 22497 aaaaattgagcagttaatattacc 22520
to top
>gb|AC146947.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0057M18 map near E10005S, complete sequence
          Length = 140920

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 640   catcttgcatacccttctcaatatcaacggtcaa 673
             |||||||||| ||||||||||||| ||| |||||
Sbjct: 94044 catcttgcattcccttctcaatattaacagtcaa 94077
to top
>gb|AC138595.10| Mus musculus chromosome 1, clone RP24-286D13, complete sequence
          Length = 172490

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 482   aaccagagcttggagcagggag 503
             ||||||||||||||||||||||
Sbjct: 82754 aaccagagcttggagcagggag 82775
to top
>gb|DQ440287.1| Aedes aegypti clone AET-365 molecular chaperone mRNA, complete cds
          Length = 1080

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 633 tcctgtccatcttgcataccct 654
           ||||||||||||||||||||||
Sbjct: 665 tcctgtccatcttgcataccct 644
to top
>gb|AF312994.1|AF312994 Mus musculus chromosome 1 clone MML, complete sequence
          Length = 228283

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 482    aaccagagcttggagcagggag 503
              ||||||||||||||||||||||
Sbjct: 171200 aaccagagcttggagcagggag 171221
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 640      catcttgcatacccttctcaatatcaacggtcaa 673
                |||||||||| ||||||||||||| ||| |||||
Sbjct: 13736235 catcttgcattcccttctcaatattaacagtcaa 13736268
to top
>gb|AF239932.1|AF239932 Euphorbia esula DnaJ protein mRNA, complete cds
          Length = 1698

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 635 ctgtccatcttgcatacccttctcaa 660
           |||||||| |||||||||||||||||
Sbjct: 786 ctgtccattttgcatacccttctcaa 761
to top
>gb|AF085275.1|AF085275 Hevea brasiliensis DnaJ protein mRNA, complete cds
          Length = 1562

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 635 ctgtccatcttgcatacccttctcaa 660
           |||||||| |||||||||||||||||
Sbjct: 790 ctgtccattttgcatacccttctcaa 765
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 640      catcttgcatacccttctcaatatcaacggtcaa 673
                |||||||||| ||||||||||||| ||| |||||
Sbjct: 13818233 catcttgcattcccttctcaatattaacagtcaa 13818266
to top
>emb|AJ297131.1|MMAJ2971 Mus musculus SIL, MAP_17, CYP_a, SCL & CYP_b genes
          Length = 234411

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 263   ttcttatgcaagaacatccttc 284
             ||||||||||||||||||||||
Sbjct: 98086 ttcttatgcaagaacatccttc 98107
to top
>emb|AL645473.12| Mouse DNA sequence from clone RP23-246H17 on chromosome 4, complete
            sequence
          Length = 162757

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 263  ttcttatgcaagaacatccttc 284
            ||||||||||||||||||||||
Sbjct: 4323 ttcttatgcaagaacatccttc 4344
to top
>emb|AL731651.1| Mouse DNA sequence from clone XX-PAC129 on chromosome 4, complete
             sequence
          Length = 147323

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 263   ttcttatgcaagaacatccttc 284
             ||||||||||||||||||||||
Sbjct: 11775 ttcttatgcaagaacatccttc 11796
to top
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 287    cttggccttctggtcgtccgt 307
              |||||||||||||||||||||
Sbjct: 520626 cttggccttctggtcgtccgt 520646
to top
>emb|AL590444.1|CNS07EGB chromosome IV of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 218329

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 279    tccttcagcttggccttctgg 299
              |||||||||||||||||||||
Sbjct: 127945 tccttcagcttggccttctgg 127925
to top
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete
              sequence
          Length = 1019846

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 453    tcaagatgcttgaggttcttctcg 476
              ||||| ||||||||||||||||||
Sbjct: 393301 tcaaggtgcttgaggttcttctcg 393278
to top
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 276     acatccttcagcttggcctt 295
               ||||||||||||||||||||
Sbjct: 2224693 acatccttcagcttggcctt 2224712
to top
>gb|AC135359.2| Mus musculus BAC clone RP24-209E17 from chromosome 5, complete sequence
          Length = 199822

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    aatactacagatctgttaaa 84
             ||||||||||||||||||||
Sbjct: 16007 aatactacagatctgttaaa 16026
to top
>gb|AC005105.3| Homo sapiens BAC clone CTA-491N20 from 7, complete sequence
          Length = 177206

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   gcaacaccattggtgcttct 183
             ||||||||||||||||||||
Sbjct: 99917 gcaacaccattggtgcttct 99898
to top
>emb|BX890590.11| Zebrafish DNA sequence from clone DKEY-15H19 in linkage group 3, complete
              sequence
          Length = 141661

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 486    agagcttggagcagggagat 505
              ||||||||||||||||||||
Sbjct: 117597 agagcttggagcagggagat 117616
to top
>ref|XM_567811.1| Cryptococcus neoformans var. neoformans JEC21 purine nucleotide
            binding protein (CNK01320) partial mRNA
          Length = 3163

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 453  tcaagatgcttgaggttcttctcg 476
            ||||| ||||||||||||||||||
Sbjct: 2289 tcaaggtgcttgaggttcttctcg 2266
to top
>gb|AC132264.3| Mus musculus BAC clone RP24-371N18 from chromosome 19, complete
            sequence
          Length = 125468

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 124  taatattaccaacggaaaatcaca 147
            |||||||||||| |||||||||||
Sbjct: 4079 taatattaccaagggaaaatcaca 4056
to top
>gb|AC124720.3| Mus musculus BAC clone RP23-387F14 from chromosome 5, complete sequence
          Length = 193210

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    aatactacagatctgttaaa 84
             ||||||||||||||||||||
Sbjct: 43392 aatactacagatctgttaaa 43373
to top
>gb|AC116999.2| Mus musculus BAC clone RP23-28L10 from 19, complete sequence
          Length = 209671

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 124    taatattaccaacggaaaatcaca 147
              |||||||||||| |||||||||||
Sbjct: 183825 taatattaccaagggaaaatcaca 183802
to top
>gb|AC145329.35| Medicago truncatula clone mth2-8i21, complete sequence
          Length = 123357

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 369   tgcaatggcatgccctctcctttgaatttcct 400
             ||||||||||| ||||| |||||||| |||||
Sbjct: 64965 tgcaatggcataccctcccctttgaacttcct 64996
to top
>emb|AL392087.7| Human DNA sequence from clone RP11-454H24 on chromosome 10 Contains part
              of a novel gene (KIAA0534), complete sequence
          Length = 193980

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 45     tacaaattcattgactttctaata 68
              |||||||||||||||||| |||||
Sbjct: 160303 tacaaattcattgactttataata 160326
to top
>emb|AL355795.13| Human DNA sequence from clone RP4-668G5 on chromosome 1p23.1-23.3
             Contains the 3' end of a novel gene, complete sequence
          Length = 146715

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 261   agttcttatgcaagaacatc 280
             ||||||||||||||||||||
Sbjct: 10094 agttcttatgcaagaacatc 10113
to top
>emb|AL118513.17|HSDJ685L9 Human DNA sequence from clone RP4-685L9 on chromosome 20 Contains the
             gene for a novel protein (FLJ90166), the 5' end of a nove
             genel (LOC149773) and two CpG islands, complete sequence
          Length = 92835

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 569   cctgaacttcaagtctccaggttc 592
             ||||||||||| ||||||||||||
Sbjct: 63932 cctgaacttcatgtctccaggttc 63909
to top
>emb|AL109613.11|HS1033H22 Human DNA sequence from clone RP5-1033H22 on chromosome 1p21.2-22.2
             Contains the 3' end of the gene for a novel formin binding
             protein 1 family protein, the 3' end of the BCAR3 gene for
             breast cancer anti-estrogen resistance 3 and a novel gene,
             complete sequence
          Length = 142018

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 671   caaaaaatcacctttctcgt 690
             ||||||||||||||||||||
Sbjct: 17289 caaaaaatcacctttctcgt 17270
to top
>gb|AC157769.3| Mus musculus chromosome 1, clone RP24-314L7, complete sequence
          Length = 131045

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 207    tttccttgaggtacacctcaaaca 230
              ||||||||| ||||||||||||||
Sbjct: 117583 tttccttgaagtacacctcaaaca 117606
to top
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 668    ggtcaaaaaatcacctttct 687
              ||||||||||||||||||||
Sbjct: 489724 ggtcaaaaaatcacctttct 489743
to top
>gb|AC012558.9| Homo sapiens chromosome 10 clone RP11-174J11, complete sequence
          Length = 179391

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 196   tacttggaaaatttccttgaggta 219
             |||||||| |||||||||||||||
Sbjct: 46700 tacttggagaatttccttgaggta 46723
to top
>gb|AC099792.2| Homo sapiens chromosome 1 clone RP11-436K8, complete sequence
          Length = 207243

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 261    agttcttatgcaagaacatc 280
              ||||||||||||||||||||
Sbjct: 157636 agttcttatgcaagaacatc 157655
to top
>gb|AC138023.2| Homo sapiens chromosome 3 clone RP11-7G8, complete sequence
          Length = 153994

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 353   tttcttgttgctttggtgca 372
             ||||||||||||||||||||
Sbjct: 74250 tttcttgttgctttggtgca 74231
to top
>gb|AC026205.6|AC026205 Homo sapiens chromosome 3 clone RP11-61I9 map 3p, complete sequence
          Length = 176669

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 648   atacccttctcaatatcaac 667
             ||||||||||||||||||||
Sbjct: 15226 atacccttctcaatatcaac 15245
to top
>emb|BX004969.5| Zebrafish DNA sequence from clone CH211-89C12 in linkage group 7,
              complete sequence
          Length = 161142

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 190    gcaagctacttggaaaattt 209
              ||||||||||||||||||||
Sbjct: 111005 gcaagctacttggaaaattt 111024
to top
>emb|AL845516.8| Zebrafish DNA sequence from clone DKEY-43F11, complete sequence
          Length = 205826

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 190    gcaagctacttggaaaattt 209
              ||||||||||||||||||||
Sbjct: 133112 gcaagctacttggaaaattt 133093
to top
>gb|AC002526.1|AC002526 Human PAC clone RP4-558L21 from Xq23, complete sequence
          Length = 134580

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 353  tttcttgttgctttggtgca 372
            ||||||||||||||||||||
Sbjct: 5266 tttcttgttgctttggtgca 5247
to top
>emb|Z16559.1|HS095WC9 H. sapiens (D1S203) DNA segment containing (CA) repeat; clone
           AFM095wc9; single read
          Length = 196

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 261 agttcttatgcaagaacatc 280
           ||||||||||||||||||||
Sbjct: 121 agttcttatgcaagaacatc 140
to top
>gb|AC005873.3|AC005873 citb_15_o_21, complete sequence
          Length = 195653

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 45     tacaaattcattgactttctaata 68
              |||||||||||||||||| |||||
Sbjct: 154695 tacaaattcattgactttataata 154672
to top
>gb|AC154015.3| Mus musculus 6 BAC RP24-194J12 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 151119

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 357   ttgttgctttggtgcaatggcatg 380
             |||||||||||||||||| |||||
Sbjct: 47352 ttgttgctttggtgcaattgcatg 47375
to top
>emb|BX005402.7| Zebrafish DNA sequence from clone DKEY-237J11, complete sequence
          Length = 148726

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 195    ctacttggaaaatttccttg 214
              ||||||||||||||||||||
Sbjct: 124761 ctacttggaaaatttccttg 124742
to top
>gb|AC122860.5| Mus musculus BAC clone RP23-135A22 from 12, complete sequence
          Length = 233864

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 481    caaccagagcttggagcagg 500
              ||||||||||||||||||||
Sbjct: 132126 caaccagagcttggagcagg 132107
to top
>emb|AL772291.9| Mouse DNA sequence from clone RP23-395G1 on chromosome 4, complete
              sequence
          Length = 222046

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 48     aaattcattgactttctaat 67
              ||||||||||||||||||||
Sbjct: 167318 aaattcattgactttctaat 167299
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>gb|AC026167.5| Homo sapiens chromosome 3 clone RP11-140B10 map 3p, complete sequence
          Length = 188867

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 648    atacccttctcaatatcaac 667
              ||||||||||||||||||||
Sbjct: 128466 atacccttctcaatatcaac 128447


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,714,666
Number of Sequences: 3902068
Number of extensions: 6714666
Number of successful extensions: 138274
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 137827
Number of HSP's gapped (non-prelim): 438
length of query: 701
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 678
effective length of database: 17,143,297,704
effective search space: 11623155843312
effective search space used: 11623155843312
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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