ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags30m04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_192520.1| Oryza sativa (japonica cultivar-group), predic... 100 1e-17
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 100 1e-17
3dbj|AP003341.4| Oryza sativa (japonica cultivar-group) genomic D... 100 1e-17
4dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic D... 100 1e-17
5dbj|AK063284.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
6gb|AY109171.1| Zea mays PCO144014 mRNA sequence 88 4e-14
7gb|AC124174.4| Mus musculus BAC clone RP23-181O22 from chromosom... 50 0.010
8gb|AC113309.7| Mus musculus chromosome 6, clone RP23-440D19, com... 46 0.15
9gb|AC146683.11| Medicago truncatula clone mth2-179n10, complete ... 44 0.60
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.60
11dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.60
12dbj|AK121968.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.60
13gb|AY529462.1| Mycoplasma capricolum subsp. capripneumoniae Mg2+... 42 2.4
14gb|AC125027.12| Mus musculus chromosome 8, clone RP24-68F20, com... 42 2.4
15gb|AC154498.2| Mus musculus BAC clone RP24-112F5 from chromosome... 42 2.4
16gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 42 2.4
17emb|BX842644.1| Mycoplasma mycoides subsp. mycoides SC genomic D... 42 2.4
18gb|AC108747.5| Homo sapiens 3 BAC RP11-268E23 (Roswell Park Canc... 42 2.4
19gb|DQ384110.1| Rhizobium leguminosarum bv. trifolii strain TA1 p... 42 2.4
20gb|AC008447.8| Homo sapiens chromosome 5 clone CTC-340K5, comple... 42 2.4
21gb|AC122209.5| Mus musculus BAC clone RP23-96B17 from chromosome... 42 2.4
22gb|AC112721.3| Homo sapiens BAC clone RP11-704F14 from 2, comple... 42 2.4
23gb|AC008509.5|AC008509 Homo sapiens chromosome 5 clone CTC-449I1... 42 2.4
24gb|AC005690.8|AC005690 Homo sapiens chromosome 4 clone C0483I23,... 42 2.4
25gb|AF109295.1|AF109295 Staphylococcus carnosus NarQ-like protein... 42 2.4
26gb|AC007967.3|AC007967 Homo sapiens clone NH0373F14, complete se... 42 2.4
27gb|AC151998.6| Mus musculus BAC clone RP23-98L16 from chromosome... 42 2.4
28emb|AL808113.7| Mouse DNA sequence from clone RP23-464N8 on chro... 42 2.4
29gb|AC158156.10| Mus musculus chromosome 3, clone RP23-145F12, co... 40 9.4
30gb|AC111059.9| Mus musculus chromosome 15, clone RP24-495D8, com... 40 9.4
31ref|NM_001040544.1| Bos taurus similar to BCL2-associated athano... 40 9.4
32gb|AC140209.2| Mus musculus BAC clone RP24-472D23 from chromosom... 40 9.4
33ref|NM_001032475.1| Ciona intestinalis axonemal p83.9 (CiAxp83.9... 40 9.4
34gb|AC161829.5| Mus musculus 10 BAC RP23-304K21 (Roswell Park Can... 40 9.4
35gb|AC123038.3| Mus musculus BAC clone RP24-527G2 from chromosome... 40 9.4
36gb|AC122535.3| Mus musculus BAC clone RP24-539K4 from chromosome... 40 9.4
37ref|XM_822935.1| Trypanosoma brucei TREU927 hypothetical protein... 40 9.4
38emb|CT010465.5| Mouse DNA sequence from clone RP23-273I1 on chro... 40 9.4
39gb|AC124410.4| Mus musculus BAC clone RP24-266J11 from chromosom... 40 9.4
40gb|AC127550.3| Mus musculus BAC clone RP24-535F16 from chromosom... 40 9.4
41gb|AC117275.3| Mus musculus BAC clone RP23-383F11 from chromosom... 40 9.4
42emb|AJ887987.1| Trypanosoma brucei brucei mRNA for transcription... 40 9.4
43ref|XM_726360.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 9.4
44gb|AC006971.2| Homo sapiens PAC clone RP4-791C19 from 7, complet... 40 9.4
45gb|AC006651.2| Caenorhabditis elegans fosmid H06I04, complete se... 40 9.4
46emb|CR383667.11| Zebrafish DNA sequence from clone CH211-229P19 ... 40 9.4
47gb|AC137828.24| Medicago truncatula clone mth2-6c16, complete se... 40 9.4
48gb|AC138056.33| Medicago truncatula clone mth2-13i6, complete se... 40 9.4
49gb|BC111177.1| Bos taurus similar to BCL2-associated athanogene ... 40 9.4
50gb|CP000302.1| Shewanella denitrificans OS217, complete genome 40 9.4
51emb|AL355475.7| Human DNA sequence from clone RP1-241M7 on chrom... 40 9.4
52emb|AL353895.4| Human DNA sequence from clone RP11-503K16 on chr... 40 9.4
53emb|AL137843.4| Human DNA sequence from clone RP3-377O6 on chrom... 40 9.4
54ref|XM_780854.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 9.4
55gb|AC162381.7| Mus musculus 10 BAC RP24-528B14 (Roswell Park Can... 40 9.4
56emb|BX248578.6| Mouse DNA sequence from clone RP23-227K23 on chr... 40 9.4
57gb|AC113389.2| Homo sapiens chromosome 5 clone RP11-35A11, compl... 40 9.4
58gb|AC159475.9| Mus musculus 10 BAC RP23-55G19 (Roswell Park Canc... 40 9.4
59emb|X03784.1|SCCAN1G Yeast CAN1 gene for arginine permease 40 9.4
60emb|BX511174.4| Zebrafish DNA sequence from clone CH211-270L17, ... 40 9.4
61dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 40 9.4
62gb|AC159471.6| Mus musculus 6 BAC RP24-148O24 (Roswell Park Canc... 40 9.4
63gb|AC091911.3| Homo sapiens chromosome 5 clone RP11-211K15, comp... 40 9.4
64gb|AC157364.6| Mus musculus chromosome 3, clone RP23-324P1, comp... 40 9.4
65dbj|AB210690.1| Ciona intestinalis mRNA for transcription factor... 40 9.4
66gb|AC159105.2| Mus musculus BAC clone RP23-248P15 from chromosom... 40 9.4
67gb|AC131340.4| Mus musculus BAC clone RP23-472G22 from chromosom... 40 9.4
68gb|AC010739.3| Homo sapiens BAC clone RP11-478M12 from 2, comple... 40 9.4
69gb|AC006560.8| Homo sapiens 12 BAC RPCI11-792F18 (Roswell Park C... 40 9.4
70gb|U18795.1|SCE9669 Saccharomyces cerevisiae chromosome V cosmid... 40 9.4
71gb|AC016412.12| Homo sapiens chromosome 8, clone RP11-9B18, comp... 40 9.4
72dbj|AB083181.1| Ciona intestinalis CiAxp83.9 mRNA for axonemal p... 40 9.4
73dbj|AK174735.1| Ciona intestinalis cDNA, clone:ciht008k18, full ... 40 9.4
74gb|AC144755.3| Didelphis virginiana clone LB3-224H2, complete se... 40 9.4
75emb|AL449963.2|HS399M15 Homo sapiens chromosome 9 BAC RP11-399M1... 40 9.4
76gb|AC110091.4| Mus musculus BAC clone RP24-87K15 from 9, complet... 40 9.4
77gb|AC174383.3| Mus musculus BAC clone RP23-244A20 from chromosom... 40 9.4
78dbj|AP003463.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 9.4
79dbj|AK116639.1| Ciona intestinalis cDNA, clone:cits050e19, full ... 40 9.4
80dbj|AP006702.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 9.4
81dbj|AP006701.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 9.4
82gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold 40 9.4
83gb|AC139295.5| Mus musculus BAC clone RP24-131B6 from chromosome... 40 9.4
84emb|AL928553.8| Mouse DNA sequence from clone RP23-312N5 on chro... 40 9.4
85gb|AC122116.9| Mus musculus chromosome 7, clone RP23-449M8, comp... 40 9.4
86emb|AL691503.6| Mouse DNA sequence from clone RP23-47N17 on chro... 40 9.4
87gb|AC166160.3| Mus musculus BAC clone RP24-86O19 from chromosome... 40 9.4
88gb|AC101932.9| Mus musculus chromosome 7, clone RP24-66E13, comp... 40 9.4
89gb|M73776.1|FLAN2NAE Influenza virus A/Mallard/New York/6874/78 ... 40 9.4
90gb|M11724.1|YSCCAN1 Yeast (S.cerevisiae) CAN1 gene encoding an a... 40 9.4 
>ref|NM_192520.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 6624

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 101/118 (85%)
 Strand = Plus / Minus

                                                                        
Query: 250  ttatcttccgcttcttgtgttctcggtgcttggcagacattcgcaacttcctcttggcgt 309
            ||||||||||  ||||||| || |||||||||||||  || |||| |||||||||||| |
Sbjct: 6487 ttatcttccgtctcttgtgctcccggtgcttggcagcgatgcgcagcttcctcttggcat 6428

                                                                      
Query: 310  gccgcgctgggtcgacggctgcaacaagcttctcagcctgctttctgctctccctctt 367
            | ||||| ||||| ||||| || | ||||||||| | |||||||||||||||||||||
Sbjct: 6427 ggcgcgccgggtccacggccgcgataagcttctctgactgctttctgctctccctctt 6370



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 478  tgatgactttcccagcaaatccttca 503
            ||||||||||||||||||||||||||
Sbjct: 6199 tgatgactttcccagcaaatccttca 6174
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 101/118 (85%)
 Strand = Plus / Minus

                                                                            
Query: 250      ttatcttccgcttcttgtgttctcggtgcttggcagacattcgcaacttcctcttggcgt 309
                ||||||||||  ||||||| || |||||||||||||  || |||| |||||||||||| |
Sbjct: 22724161 ttatcttccgtctcttgtgctcccggtgcttggcagcgatgcgcagcttcctcttggcat 22724102

                                                                          
Query: 310      gccgcgctgggtcgacggctgcaacaagcttctcagcctgctttctgctctccctctt 367
                | ||||| ||||| ||||| || | ||||||||| | |||||||||||||||||||||
Sbjct: 22724101 ggcgcgccgggtccacggccgcgataagcttctctgactgctttctgctctccctctt 22724044



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                            
Query: 618      tcctccatctgcattgcaatttttcccattttcttcaggagagaagaaacaaagaaagat 677
                |||| ||||||||||||||| ||||||||  |||||||||| |||||||| || ||||||
Sbjct: 22723581 tcctgcatctgcattgcaatctttcccatcctcttcaggagcgaagaaactaacaaagat 22723522

                 
Query: 678      g 678
                |
Sbjct: 22723521 g 22723521



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                          
Query: 478      tgatgactttcccagcaaatccttca 503
                ||||||||||||||||||||||||||
Sbjct: 22723812 tgatgactttcccagcaaatccttca 22723787
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>dbj|AP003341.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBb0024F06
          Length = 129402

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 101/118 (85%)
 Strand = Plus / Minus

                                                                          
Query: 250    ttatcttccgcttcttgtgttctcggtgcttggcagacattcgcaacttcctcttggcgt 309
              ||||||||||  ||||||| || |||||||||||||  || |||| |||||||||||| |
Sbjct: 100873 ttatcttccgtctcttgtgctcccggtgcttggcagcgatgcgcagcttcctcttggcat 100814

                                                                        
Query: 310    gccgcgctgggtcgacggctgcaacaagcttctcagcctgctttctgctctccctctt 367
              | ||||| ||||| ||||| || | ||||||||| | |||||||||||||||||||||
Sbjct: 100813 ggcgcgccgggtccacggccgcgataagcttctctgactgctttctgctctccctctt 100756



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                          
Query: 618    tcctccatctgcattgcaatttttcccattttcttcaggagagaagaaacaaagaaagat 677
              |||| ||||||||||||||| ||||||||  |||||||||| |||||||| || ||||||
Sbjct: 100293 tcctgcatctgcattgcaatctttcccatcctcttcaggagcgaagaaactaacaaagat 100234

               
Query: 678    g 678
              |
Sbjct: 100233 g 100233



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                        
Query: 478    tgatgactttcccagcaaatccttca 503
              ||||||||||||||||||||||||||
Sbjct: 100524 tgatgactttcccagcaaatccttca 100499
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>dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0712E02
          Length = 158084

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 101/118 (85%)
 Strand = Plus / Minus

                                                                         
Query: 250   ttatcttccgcttcttgtgttctcggtgcttggcagacattcgcaacttcctcttggcgt 309
             ||||||||||  ||||||| || |||||||||||||  || |||| |||||||||||| |
Sbjct: 41550 ttatcttccgtctcttgtgctcccggtgcttggcagcgatgcgcagcttcctcttggcat 41491

                                                                       
Query: 310   gccgcgctgggtcgacggctgcaacaagcttctcagcctgctttctgctctccctctt 367
             | ||||| ||||| ||||| || | ||||||||| | |||||||||||||||||||||
Sbjct: 41490 ggcgcgccgggtccacggccgcgataagcttctctgactgctttctgctctccctctt 41433



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                         
Query: 618   tcctccatctgcattgcaatttttcccattttcttcaggagagaagaaacaaagaaagat 677
             |||| ||||||||||||||| ||||||||  |||||||||| |||||||| || ||||||
Sbjct: 40970 tcctgcatctgcattgcaatctttcccatcctcttcaggagcgaagaaactaacaaagat 40911

              
Query: 678   g 678
             |
Sbjct: 40910 g 40910



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                       
Query: 478   tgatgactttcccagcaaatccttca 503
             ||||||||||||||||||||||||||
Sbjct: 41201 tgatgactttcccagcaaatccttca 41176
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>dbj|AK063284.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-D05, full
           insert sequence
          Length = 519

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 95/112 (84%)
 Strand = Plus / Minus

                                                                       
Query: 250 ttatcttccgcttcttgtgttctcggtgcttggcagacattcgcaacttcctcttggcgt 309
           ||||||||||  ||||||| || |||||||||||||  || |||| |||||||||||| |
Sbjct: 181 ttatcttccgtctcttgtgctcccggtgcttggcagcgatgcgcagcttcctcttggcat 122

                                                               
Query: 310 gccgcgctgggtcgacggctgcaacaagcttctcagcctgctttctgctctc 361
           | ||||| ||||| ||||| || | ||||||||| | |||||||||||||||
Sbjct: 121 ggcgcgccgggtccacggccgcgataagcttctctgactgctttctgctctc 70
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>gb|AY109171.1| Zea mays PCO144014 mRNA sequence
          Length = 738

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 74/84 (88%)
 Strand = Plus / Minus

                                                                       
Query: 462 tgcttaacttcatcagtgatgactttcccagcaaatccttcagcaactttgtacaatggg 521
           ||||| ||||||||| | |  |||||||||||||||||||||| |||||| |||||||||
Sbjct: 310 tgcttcacttcatcactaacaactttcccagcaaatccttcagaaactttatacaatggg 251

                                   
Query: 522 gccaacatgtgaacagcataggtt 545
           ||||| | |||| |||||||||||
Sbjct: 250 gccaagaggtgatcagcataggtt 227



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 111/134 (82%)
 Strand = Plus / Minus

                                                                       
Query: 222 ctcatccaccttcccatcttcaacgctgttatcttccgcttcttgtgttctcggtgcttg 281
           ||||||||||| || ||||||| |||  ||||||| ||| |||||||||| |||||||||
Sbjct: 550 ctcatccacctgccaatcttcatcgccattatctttcgcctcttgtgttcccggtgcttg 491

                                                                       
Query: 282 gcagacattcgcaacttcctcttggcgtgccgcgctgggtcgacggctgcaacaagcttc 341
           || | |||||||  ||| | |||||| |  ||  ||||||| ||||||||||||| ||||
Sbjct: 490 gctgccattcgctgctttcgcttggcattgcgttctgggtccacggctgcaacaatcttc 431

                         
Query: 342 tcagcctgctttct 355
           |  |||||||||||
Sbjct: 430 tgtgcctgctttct 417



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 87/104 (83%)
 Strand = Plus / Minus

                                                                       
Query: 575 tgaaatcatactgaaacaactgaacacgatcttcatatgtgtgtcctccatctgcattgc 634
           |||||||||| |||| ||| |||||||| |||| || ||||| |||| ||| ||||||||
Sbjct: 200 tgaaatcatattgaagcaattgaacacgttctttatctgtgtatcctgcatttgcattgc 141

                                                       
Query: 635 aatttttcccattttcttcaggagagaagaaacaaagaaagatg 678
           |||| ||||||| ||||| ||||  || ||||| || |||||||
Sbjct: 140 aattcttcccatcttctttaggattgacgaaactaacaaagatg 97
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>gb|AC124174.4| Mus musculus BAC clone RP23-181O22 from chromosome 3, complete sequence
          Length = 197553

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 577   aaatcatactgaaacaactgaacac 601
             |||||||||||||||||||||||||
Sbjct: 78437 aaatcatactgaaacaactgaacac 78461
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>gb|AC113309.7| Mus musculus chromosome 6, clone RP23-440D19, complete sequence
          Length = 229553

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 538   cataggttgaaaattcagcttcagtttttag 568
             |||||||| ||||||||||||||||| ||||
Sbjct: 64786 cataggttcaaaattcagcttcagttcttag 64756
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>gb|AC146683.11| Medicago truncatula clone mth2-179n10, complete sequence
          Length = 131133

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 483   actttcccagcaaatccttcagcaactttgtaca 516
             ||||| |||||||||||||||| |||||| ||||
Sbjct: 77244 acttttccagcaaatccttcagaaactttataca 77277
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 580     tcatactgaaacaactgaacacgatcttcatatg 613
               ||||||||||| |||| |||| ||||||||||||
Sbjct: 8137406 tcatactgaaaaaacttaacaagatcttcatatg 8137373
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>dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0503B05
          Length = 156814

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 580    tcatactgaaacaactgaacacgatcttcatatg 613
              ||||||||||| |||| |||| ||||||||||||
Sbjct: 125599 tcatactgaaaaaacttaacaagatcttcatatg 125566
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>dbj|AK121968.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108F20, full
            insert sequence
          Length = 3463

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 580  tcatactgaaacaactgaacacgatcttcatatg 613
            ||||||||||| |||| |||| ||||||||||||
Sbjct: 1548 tcatactgaaaaaacttaacaagatcttcatatg 1515
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>gb|AY529462.1| Mycoplasma capricolum subsp. capripneumoniae Mg2+ transport ATPase
            gene, partial cds; arcA pseudogene, complete sequence;
            ArcB gene, complete cds; arcD pseudogene, complete
            sequence; glucokinase gene, complete cds; and
            hypothetical protein gene, partial cds
          Length = 7109

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 547  aaaattcagcttcagttttta 567
            |||||||||||||||||||||
Sbjct: 6352 aaaattcagcttcagttttta 6372
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>gb|AC125027.12| Mus musculus chromosome 8, clone RP24-68F20, complete sequence
          Length = 194850

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 560    agtttttagttttagtgaaat 580
              |||||||||||||||||||||
Sbjct: 135607 agtttttagttttagtgaaat 135587
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>gb|AC154498.2| Mus musculus BAC clone RP24-112F5 from chromosome 17, complete sequence
          Length = 153547

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 661   aagaaacaaagaaagatgcaa 681
             |||||||||||||||||||||
Sbjct: 91697 aagaaacaaagaaagatgcaa 91677
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 485    tttcccagcaaatccttcagc 505
              |||||||||||||||||||||
Sbjct: 834507 tttcccagcaaatccttcagc 834487
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>emb|BX842644.1| Mycoplasma mycoides subsp. mycoides SC genomic DNA, complete sequence;
              segment 3/4
          Length = 349402

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 547    aaaattcagcttcagttttta 567
              |||||||||||||||||||||
Sbjct: 303329 aaaattcagcttcagttttta 303309



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 547    aaaattcagcttcagttttta 567
              |||||||||||||||||||||
Sbjct: 290027 aaaattcagcttcagttttta 290007
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>gb|AC108747.5| Homo sapiens 3 BAC RP11-268E23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 46509

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 658   gagaagaaacaaagaaagatgcaag 682
             |||| ||||||||||||||||||||
Sbjct: 33780 gagatgaaacaaagaaagatgcaag 33756
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>gb|DQ384110.1| Rhizobium leguminosarum bv. trifolii strain TA1 polysaccharide
             biosynthesis region I
          Length = 32260

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 645   attttcttcaggagagaagaa 665
             |||||||||||||||||||||
Sbjct: 21112 attttcttcaggagagaagaa 21092
to top
>gb|AC008447.8| Homo sapiens chromosome 5 clone CTC-340K5, complete sequence
          Length = 159922

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 639   tttcccattttcttcaggagagaag 663
             |||||| ||||||||||||||||||
Sbjct: 42757 tttccctttttcttcaggagagaag 42733
to top
>gb|AC122209.5| Mus musculus BAC clone RP23-96B17 from chromosome 17, complete sequence
          Length = 185883

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 661   aagaaacaaagaaagatgcaa 681
             |||||||||||||||||||||
Sbjct: 34793 aagaaacaaagaaagatgcaa 34813
to top
>gb|AC112721.3| Homo sapiens BAC clone RP11-704F14 from 2, complete sequence
          Length = 188829

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 656    gagagaagaaacaaagaaaga 676
              |||||||||||||||||||||
Sbjct: 163935 gagagaagaaacaaagaaaga 163915
to top
>gb|AC008509.5|AC008509 Homo sapiens chromosome 5 clone CTC-449I11, complete sequence
          Length = 189456

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 639   tttcccattttcttcaggagagaag 663
             |||||| ||||||||||||||||||
Sbjct: 65812 tttccctttttcttcaggagagaag 65836
to top
>gb|AC005690.8|AC005690 Homo sapiens chromosome 4 clone C0483I23, complete sequence
          Length = 193424

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 656    gagagaagaaacaaagaaaga 676
              |||||||||||||||||||||
Sbjct: 163927 gagagaagaaacaaagaaaga 163907
to top
>gb|AF109295.1|AF109295 Staphylococcus carnosus NarQ-like protein gene, partial cds;
            galactose operon, complete sequence; and molybdenum
            cofactor biosynthetic gene cluster, complete sequence
          Length = 13903

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 41   taacttgatcgatatatgcat 61
            |||||||||||||||||||||
Sbjct: 7786 taacttgatcgatatatgcat 7766
to top
>gb|AC007967.3|AC007967 Homo sapiens clone NH0373F14, complete sequence
          Length = 187547

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 657   agagaagaaacaaagaaagat 677
             |||||||||||||||||||||
Sbjct: 31598 agagaagaaacaaagaaagat 31618
to top
>gb|AC151998.6| Mus musculus BAC clone RP23-98L16 from chromosome 8, complete sequence
          Length = 219376

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 338    cttctcagcctgctttctgctctccctct 366
              |||| ||||||||||||| ||||||||||
Sbjct: 128571 cttcacagcctgctttcttctctccctct 128543
to top
>emb|AL808113.7| Mouse DNA sequence from clone RP23-464N8 on chromosome X, complete
            sequence
          Length = 129039

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 655  ggagagaagaaacaaagaaag 675
            |||||||||||||||||||||
Sbjct: 3567 ggagagaagaaacaaagaaag 3547
to top
>gb|AC158156.10| Mus musculus chromosome 3, clone RP23-145F12, complete sequence
          Length = 201984

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 657    agagaagaaacaaagaaaga 676
              ||||||||||||||||||||
Sbjct: 143940 agagaagaaacaaagaaaga 143959
to top
>gb|AC111059.9| Mus musculus chromosome 15, clone RP24-495D8, complete sequence
          Length = 124519

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 350   ctttctgctctccctctttgcttt 373
             ||||||||| ||||||||||||||
Sbjct: 77309 ctttctgctttccctctttgcttt 77332
to top
>ref|NM_001040544.1| Bos taurus similar to BCL2-associated athanogene 5 isoform a
            (LOC522854), mRNA
          Length = 1812

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 51   gatatatgcatgtatacatc 70
            ||||||||||||||||||||
Sbjct: 1698 gatatatgcatgtatacatc 1679
to top
>gb|AC140209.2| Mus musculus BAC clone RP24-472D23 from chromosome 15, complete sequence
          Length = 175802

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 350    ctttctgctctccctctttgcttt 373
              ||||||||| ||||||||||||||
Sbjct: 127859 ctttctgctttccctctttgcttt 127836
to top
>ref|NM_001032475.1| Ciona intestinalis axonemal p83.9 (CiAxp83.9), mRNA
          Length = 2372

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 659  agaagaaacaaagaaagatg 678
            ||||||||||||||||||||
Sbjct: 1012 agaagaaacaaagaaagatg 1031
to top
>gb|AC161829.5| Mus musculus 10 BAC RP23-304K21 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 196522

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 336   agcttctcagcctgctttct 355
             ||||||||||||||||||||
Sbjct: 57713 agcttctcagcctgctttct 57732
to top
>gb|AC123038.3| Mus musculus BAC clone RP24-527G2 from chromosome 3, complete sequence
          Length = 144150

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 657   agagaagaaacaaagaaaga 676
             ||||||||||||||||||||
Sbjct: 76745 agagaagaaacaaagaaaga 76726
to top
>gb|AC122535.3| Mus musculus BAC clone RP24-539K4 from chromosome 7, complete sequence
          Length = 186561

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 659   agaagaaacaaagaaagatg 678
             ||||||||||||||||||||
Sbjct: 53463 agaagaaacaaagaaagatg 53482
to top
>ref|XM_822935.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.61.0780)
           partial mRNA
          Length = 1692

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 229 accttcccatcttcaacgct 248
           ||||||||||||||||||||
Sbjct: 713 accttcccatcttcaacgct 694
to top
>emb|CT010465.5| Mouse DNA sequence from clone RP23-273I1 on chromosome 13, complete
             sequence
          Length = 220594

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 657   agagaagaaacaaagaaaga 676
             ||||||||||||||||||||
Sbjct: 83168 agagaagaaacaaagaaaga 83187
to top
>gb|AC124410.4| Mus musculus BAC clone RP24-266J11 from chromosome 7, complete sequence
          Length = 162876

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 659   agaagaaacaaagaaagatg 678
             ||||||||||||||||||||
Sbjct: 12350 agaagaaacaaagaaagatg 12331
to top
>gb|AC127550.3| Mus musculus BAC clone RP24-535F16 from chromosome 3, complete sequence
          Length = 187545

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 657    agagaagaaacaaagaaaga 676
              ||||||||||||||||||||
Sbjct: 135127 agagaagaaacaaagaaaga 135108
to top
>gb|AC117275.3| Mus musculus BAC clone RP23-383F11 from chromosome 18, complete
             sequence
          Length = 209162

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 555   gcttcagtttttagttttagtgaaatca 582
             ||||||||||||| ||||| ||||||||
Sbjct: 40644 gcttcagtttttaattttaatgaaatca 40671
to top
>emb|AJ887987.1| Trypanosoma brucei brucei mRNA for transcription factor IIA
            alpha-beta subunit (TFIIA-1 gene)
          Length = 2533

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 229  accttcccatcttcaacgct 248
            ||||||||||||||||||||
Sbjct: 1247 accttcccatcttcaacgct 1228
to top
>ref|XM_726360.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY03447)
           partial mRNA
          Length = 4578

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 631 ttgcaatttttcccattttc 650
           ||||||||||||||||||||
Sbjct: 821 ttgcaatttttcccattttc 802
to top
>gb|AC006971.2| Homo sapiens PAC clone RP4-791C19 from 7, complete sequence
          Length = 115861

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 657    agagaagaaacaaagaaaga 676
              ||||||||||||||||||||
Sbjct: 106665 agagaagaaacaaagaaaga 106684
to top
>gb|AC006651.2| Caenorhabditis elegans fosmid H06I04, complete sequence
          Length = 47880

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 630   attgcaatttttcccatttt 649
             ||||||||||||||||||||
Sbjct: 29545 attgcaatttttcccatttt 29526
to top
>emb|CR383667.11| Zebrafish DNA sequence from clone CH211-229P19 in linkage group 10,
             complete sequence
          Length = 121560

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 659   agaagaaacaaagaaagatg 678
             ||||||||||||||||||||
Sbjct: 99540 agaagaaacaaagaaagatg 99559
to top
>gb|AC137828.24| Medicago truncatula clone mth2-6c16, complete sequence
          Length = 128575

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 564   tttagttttagtgaaatcat 583
             ||||||||||||||||||||
Sbjct: 67238 tttagttttagtgaaatcat 67257
to top
>gb|AC138056.33| Medicago truncatula clone mth2-13i6, complete sequence
          Length = 157258

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 564   tttagttttagtgaaatcat 583
             ||||||||||||||||||||
Sbjct: 23690 tttagttttagtgaaatcat 23709
to top
>gb|BC111177.1| Bos taurus similar to BCL2-associated athanogene 5 isoform a, mRNA
            (cDNA clone MGC:133732 IMAGE:8054618), complete cds
          Length = 1812

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 51   gatatatgcatgtatacatc 70
            ||||||||||||||||||||
Sbjct: 1698 gatatatgcatgtatacatc 1679
to top
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome
          Length = 4545906

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 657     agagaagaaacaaagaaaga 676
               ||||||||||||||||||||
Sbjct: 2348085 agagaagaaacaaagaaaga 2348104
to top
>emb|AL355475.7| Human DNA sequence from clone RP1-241M7 on chromosome 1q43-44, complete
             sequence
          Length = 84707

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 657   agagaagaaacaaagaaaga 676
             ||||||||||||||||||||
Sbjct: 73826 agagaagaaacaaagaaaga 73845
to top
>emb|AL353895.4| Human DNA sequence from clone RP11-503K16 on chromosome 9 Contains the
             3' end of the ADAMTSL1 gene for ADAMTS-like (ADAMTSR1,
             MGC40139) and a ras-related protein family pseudogene,
             complete sequence
          Length = 163163

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    atatatgcatgtatacatct 71
             ||||||||||||||||||||
Sbjct: 82548 atatatgcatgtatacatct 82567
to top
>emb|AL137843.4| Human DNA sequence from clone RP3-377O6 on chromosome Xq22.2-23
             Contains a thyroid autoantigen 70kDa (Ku antigen) (G22P1)
             pseudogene, complete sequence
          Length = 133402

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 624   atctgcattgcaatttttcccatt 647
             ||||||||||||||||| ||||||
Sbjct: 44435 atctgcattgcaattttccccatt 44458
to top
>ref|XM_780854.1| PREDICTED: Strongylocentrotus purpuratus similar to PHD finger
           protein 10 (XAP135) (LOC580820), mRNA
          Length = 3198

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 659 agaagaaacaaagaaagatg 678
           ||||||||||||||||||||
Sbjct: 927 agaagaaacaaagaaagatg 946
to top
>gb|AC162381.7| Mus musculus 10 BAC RP24-528B14 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 150712

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 336   agcttctcagcctgctttct 355
             ||||||||||||||||||||
Sbjct: 72092 agcttctcagcctgctttct 72073
to top
>emb|BX248578.6| Mouse DNA sequence from clone RP23-227K23 on chromosome 11 Contains a
              pseudogene similar to part of eukaryotic translation
              initiation factor 3, subunit 5 (epsilon) Eif3s5, complete
              sequence
          Length = 160629

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 662    agaaacaaagaaagatgcaa 681
              ||||||||||||||||||||
Sbjct: 106194 agaaacaaagaaagatgcaa 106213
to top
>gb|AC113389.2| Homo sapiens chromosome 5 clone RP11-35A11, complete sequence
          Length = 170706

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 633    gcaatttttcccattttctt 652
              ||||||||||||||||||||
Sbjct: 141690 gcaatttttcccattttctt 141709
to top
>gb|AC159475.9| Mus musculus 10 BAC RP23-55G19 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 205117

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 657   agagaagaaacaaagaaaga 676
             ||||||||||||||||||||
Sbjct: 21781 agagaagaaacaaagaaaga 21762
to top
>emb|X03784.1|SCCAN1G Yeast CAN1 gene for arginine permease
          Length = 2056

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 237  atcttcaacgctgttatctt 256
            ||||||||||||||||||||
Sbjct: 1230 atcttcaacgctgttatctt 1249
to top
>emb|BX511174.4| Zebrafish DNA sequence from clone CH211-270L17, complete sequence
          Length = 133968

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    aaactgcaatggtacagcat 41
             ||||||||||||||||||||
Sbjct: 88682 aaactgcaatggtacagcat 88701
to top
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012
          Length = 2668010

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 657     agagaagaaacaaagaaaga 676
               ||||||||||||||||||||
Sbjct: 2095140 agagaagaaacaaagaaaga 2095159
to top
>gb|AC159471.6| Mus musculus 6 BAC RP24-148O24 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 159386

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 644   cattttcttcaggagagaag 663
             ||||||||||||||||||||
Sbjct: 89391 cattttcttcaggagagaag 89372
to top
>gb|AC091911.3| Homo sapiens chromosome 5 clone RP11-211K15, complete sequence
          Length = 167553

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 633  gcaatttttcccattttctt 652
            ||||||||||||||||||||
Sbjct: 2846 gcaatttttcccattttctt 2865
to top
>gb|AC157364.6| Mus musculus chromosome 3, clone RP23-324P1, complete sequence
          Length = 198706

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 548    aaattcagcttcagttttta 567
              ||||||||||||||||||||
Sbjct: 126376 aaattcagcttcagttttta 126395
to top
>dbj|AB210690.1| Ciona intestinalis mRNA for transcription factor protein, complete
           cds, clone: cidg815m14
          Length = 1114

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 627 tgcattgcaatttttcccat 646
           ||||||||||||||||||||
Sbjct: 779 tgcattgcaatttttcccat 760
to top
>gb|AC159105.2| Mus musculus BAC clone RP23-248P15 from chromosome 13, complete sequence
          Length = 182994

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 657    agagaagaaacaaagaaaga 676
              ||||||||||||||||||||
Sbjct: 124670 agagaagaaacaaagaaaga 124651
to top
>gb|AC131340.4| Mus musculus BAC clone RP23-472G22 from chromosome 6, complete sequence
          Length = 194040

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 657   agagaagaaacaaagaaaga 676
             ||||||||||||||||||||
Sbjct: 77145 agagaagaaacaaagaaaga 77164
to top
>gb|AC010739.3| Homo sapiens BAC clone RP11-478M12 from 2, complete sequence
          Length = 180226

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 655   ggagagaagaaacaaagaaa 674
             ||||||||||||||||||||
Sbjct: 49185 ggagagaagaaacaaagaaa 49204
to top
>gb|AC006560.8| Homo sapiens 12 BAC RPCI11-792F18 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 202478

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 657   agagaagaaacaaagaaaga 676
             ||||||||||||||||||||
Sbjct: 10036 agagaagaaacaaagaaaga 10017
to top
>gb|U18795.1|SCE9669 Saccharomyces cerevisiae chromosome V cosmids 9669, 8334, 8199, and
             lambda clone 1160
          Length = 50849

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   atcttcaacgctgttatctt 256
             ||||||||||||||||||||
Sbjct: 29861 atcttcaacgctgttatctt 29842
to top
>gb|AC016412.12| Homo sapiens chromosome 8, clone RP11-9B18, complete sequence
          Length = 131000

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 653   caggagagaagaaacaaaga 672
             ||||||||||||||||||||
Sbjct: 57124 caggagagaagaaacaaaga 57143
to top
>dbj|AB083181.1| Ciona intestinalis CiAxp83.9 mRNA for axonemal p83.9, complete cds
          Length = 2372

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 659  agaagaaacaaagaaagatg 678
            ||||||||||||||||||||
Sbjct: 1012 agaagaaacaaagaaagatg 1031
to top
>dbj|AK174735.1| Ciona intestinalis cDNA, clone:ciht008k18, full insert sequence
          Length = 1099

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 627 tgcattgcaatttttcccat 646
           ||||||||||||||||||||
Sbjct: 770 tgcattgcaatttttcccat 751
to top
>gb|AC144755.3| Didelphis virginiana clone LB3-224H2, complete sequence
          Length = 116584

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   ttgaagctaagcaccaacaa 214
             ||||||||||||||||||||
Sbjct: 50045 ttgaagctaagcaccaacaa 50026
to top
>emb|AL449963.2|HS399M15 Homo sapiens chromosome 9 BAC RP11-399M15, complete sequence
          Length = 213216

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 52     atatatgcatgtatacatct 71
              ||||||||||||||||||||
Sbjct: 203285 atatatgcatgtatacatct 203304
to top
>gb|AC110091.4| Mus musculus BAC clone RP24-87K15 from 9, complete sequence
          Length = 222792

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 560    agtttttagttttagtgaaa 579
              ||||||||||||||||||||
Sbjct: 162710 agtttttagttttagtgaaa 162729
to top
>gb|AC174383.3| Mus musculus BAC clone RP23-244A20 from chromosome 18, complete sequence
          Length = 216950

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 555    gcttcagtttttagttttagtgaaatca 582
              ||||||||||||| ||||| ||||||||
Sbjct: 149523 gcttcagtttttaattttaatgaaatca 149550
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>dbj|AP003463.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-651D13, complete
             sequence
          Length = 91059

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 340   tctcagcctgctttctgctc 359
             ||||||||||||||||||||
Sbjct: 51023 tctcagcctgctttctgctc 51042
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>dbj|AK116639.1| Ciona intestinalis cDNA, clone:cits050e19, full insert sequence
          Length = 2352

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 659  agaagaaacaaagaaagatg 678
            ||||||||||||||||||||
Sbjct: 990  agaagaaacaaagaaagatg 1009
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>dbj|AP006702.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01O03, TM0588a,
            complete sequence
          Length = 24912

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 554  agcttcagtttttagtttta 573
            ||||||||||||||||||||
Sbjct: 9080 agcttcagtttttagtttta 9099
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>dbj|AP006701.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT08P04, TM0587,
             complete sequence
          Length = 110885

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 554   agcttcagtttttagtttta 573
             ||||||||||||||||||||
Sbjct: 95897 agcttcagtttttagtttta 95916
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>gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold
          Length = 1751794

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 195     ttgaagctaagcaccaacaa 214
               ||||||||||||||||||||
Sbjct: 1528910 ttgaagctaagcaccaacaa 1528891
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>gb|AC139295.5| Mus musculus BAC clone RP24-131B6 from chromosome 1, complete sequence
          Length = 175592

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 386   aacactgttgtaaatttccacaaa 409
             ||||||| ||||||||||||||||
Sbjct: 48922 aacactggtgtaaatttccacaaa 48945
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>emb|AL928553.8| Mouse DNA sequence from clone RP23-312N5 on chromosome 2, complete
             sequence
          Length = 148202

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 632   tgcaatttttcccattttct 651
             ||||||||||||||||||||
Sbjct: 37702 tgcaatttttcccattttct 37721
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>gb|AC122116.9| Mus musculus chromosome 7, clone RP23-449M8, complete sequence
          Length = 173990

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 584    actgaaacaactgaacacgatctt 607
              |||||||||||||| |||||||||
Sbjct: 141953 actgaaacaactgagcacgatctt 141976
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>emb|AL691503.6| Mouse DNA sequence from clone RP23-47N17 on chromosome X, complete
              sequence
          Length = 219711

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 657    agagaagaaacaaagaaaga 676
              ||||||||||||||||||||
Sbjct: 125624 agagaagaaacaaagaaaga 125605
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>gb|AC166160.3| Mus musculus BAC clone RP24-86O19 from chromosome 7, complete sequence
          Length = 221792

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 339   ttctcagcctgctttctgct 358
             ||||||||||||||||||||
Sbjct: 95258 ttctcagcctgctttctgct 95277
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>gb|AC101932.9| Mus musculus chromosome 7, clone RP24-66E13, complete sequence
          Length = 214419

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 584  actgaaacaactgaacacgatctt 607
            |||||||||||||| |||||||||
Sbjct: 6804 actgaaacaactgagcacgatctt 6827
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>gb|M73776.1|FLAN2NAE Influenza virus A/Mallard/New York/6874/78 (H3N2), hemagglutin (seg
           4) RNA
          Length = 1765

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 490 cagcaaatccttcagcaact 509
           ||||||||||||||||||||
Sbjct: 347 cagcaaatccttcagcaact 366
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>gb|M11724.1|YSCCAN1 Yeast (S.cerevisiae) CAN1 gene encoding an amino acid permease,
            complete cds
          Length = 2381

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 237  atcttcaacgctgttatctt 256
            ||||||||||||||||||||
Sbjct: 1447 atcttcaacgctgttatctt 1466


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,634,936
Number of Sequences: 3902068
Number of extensions: 7634936
Number of successful extensions: 191607
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 191160
Number of HSP's gapped (non-prelim): 446
length of query: 686
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 663
effective length of database: 17,143,297,704
effective search space: 11366006377752
effective search space used: 11366006377752
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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