>BP73_ORYSA (Q8L4E7) SAP-like protein BP-73 (OsBP-73) (Riaa1)|
          Length = 375

 Score = 94.0 bits (232), Expect = 3e-19
 Identities = 58/116 (50%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
 Frame = -3

Query: 550 APDXPDSVSPYEPDSVIAAEDASLDDFV-VPDDESDLLDTSEPDDYLEPLXXXXXXXXXX 374
           A D PDSVS +EP+SVI  E+ SLDD   + DDE D  DT EP    +            
Sbjct: 263 ATDEPDSVSTFEPNSVIEPENLSLDDLDHISDDEPDASDTDEPSGEYDEPSLQIPSVPII 322

Query: 373 XXXXXXXXXSQEGSPSLEVSDLSSLKVTELRELAKSRGLRGYSKMKKSDLVALLSD 206
                    S  G P     DLS+LKVTELRELAKSRG++GYSKMKK+DLV LLS+
Sbjct: 323 DESHDTTLKSSLGGP-----DLSTLKVTELRELAKSRGIKGYSKMKKNDLVELLSN 373

>RHO_MYCLE (P45835) Transcription termination factor rho (EC 3.6.1.-)|
           (ATP-dependent helicase rho)
          Length = 610

 Score = 38.5 bits (88), Expect = 0.013
 Identities = 21/63 (33%), Positives = 35/63 (55%)
 Frame = -3

Query: 328 SLEVSDLSSLKVTELRELAKSRGLRGYSKMKKSDLVALLSDAS*SVGDANPARAHRFASL 149
           ++ +  LS++ + ELR LA   G++G S M+KS+L+A + +     G AN    +   S 
Sbjct: 35  TVSLGSLSTMVLPELRALANQAGVKGTSGMRKSELIAAIEECR---GQANGTSVNDGPSR 91

Query: 148 SHG 140
            HG
Sbjct: 92  DHG 94

>RHO_THEMA (P38527) Transcription termination factor rho (EC 3.6.1.-)|
           (ATP-dependent helicase rho)
          Length = 427

 Score = 37.7 bits (86), Expect = 0.022
 Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
 Frame = -3

Query: 340 EGSPSLEVSDLSSLKVTELRELAKSRGLRGYSKMKKSDLV-ALLSDAS*SVG 188
           E   ++ +S+L S+ + +L E+AKS G+  Y+ M+K DL+ A+L   + S G
Sbjct: 3   EEQKTISISELESMNIKQLYEIAKSLGIPRYTSMRKRDLIFAILKAQTESTG 54

>RHO_MICLU (P52154) Transcription termination factor rho (EC 3.6.1.-)|
           (ATP-dependent helicase rho)
          Length = 690

 Score = 37.4 bits (85), Expect = 0.029
 Identities = 17/35 (48%), Positives = 26/35 (74%)
 Frame = -3

Query: 310 LSSLKVTELRELAKSRGLRGYSKMKKSDLVALLSD 206
           L+SLK+ +L+ LA   G+ G S+M+K+DLV  +SD
Sbjct: 15  LASLKLAQLQALASQLGIAGGSRMRKADLVTAISD 49

>VL96_IRV1 (P22856) L96 protein|
          Length = 867

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
 Frame = -3

Query: 331 PSLEVSDLSSLKVTELRELAKSRGLRGY-----SKMKKSDLVALL 212
           P    +DL   KV EL+ELAK  GL+ +     SKM K DLV  L
Sbjct: 268 PKYRAADLLGKKVVELKELAKMEGLKKWKDKTPSKMLKQDLVDFL 312

>RHO_STRLI (P52157) Transcription termination factor rho (EC 3.6.1.-)|
           (ATP-dependent helicase rho)
          Length = 707

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 19/57 (33%), Positives = 35/57 (61%)
 Frame = -3

Query: 337 GSPSLEVSDLSSLKVTELRELAKSRGLRGYSKMKKSDLVALLSDAS*SVGDANPARA 167
           GS     + L  + + EL+++A   G+RG ++M+KS L+ ++ +A  + G A PA+A
Sbjct: 31  GSRRRRGTGLEGMVLAELQQVASGLGIRGTARMRKSQLIEVIKEAQ-AAGGA-PAKA 85

>FTSY_SYNY3 (P73930) Cell division protein ftsY homolog|
          Length = 504

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = -3

Query: 556 EIAPDXPDSVSPYEPDSVIAAEDASLDDFVVPDDESDLLDTSEPDDYLE 410
           E++P+    V   E +S  + ED+   +   P  E    DT+ PDDYL+
Sbjct: 25  EVSPELAPEVIQAETESP-SEEDSQTTELAAPPPEEPSSDTANPDDYLQ 72

>RHO_NEIGO (Q06447) Transcription termination factor rho (EC 3.6.1.-)|
           (ATP-dependent helicase rho)
          Length = 419

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 13/35 (37%), Positives = 24/35 (68%)
 Frame = -3

Query: 325 LEVSDLSSLKVTELRELAKSRGLRGYSKMKKSDLV 221
           + VS+L +L +++L ELA+  G+   ++ +K DLV
Sbjct: 1   MHVSELQTLHISKLLELAEEHGIENANRFRKQDLV 35

>ECR_BOMMO (P49881) Ecdysone receptor (Ecdysteroid receptor)|
           (20-hydroxy-ecdysone receptor) (20E receptor) (EcRH)
          Length = 606

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 21/60 (35%), Positives = 34/60 (56%)
 Frame = -3

Query: 331 PSLEVSDLSSLKVTELRELAKSRGLRGYSKMKKSDLVALLSDAS*SVGDANPARAHRFAS 152
           P  ++++++ L V  + E AK  GL G+SK+ +SD + LL  +S  V     AR +  AS
Sbjct: 394 PFRQITEMTILTVQLIVEFAK--GLPGFSKISQSDQITLLKASSSEVMMLRVARRYDAAS 451

>RHO_MYCTU (P66028) Transcription termination factor rho (EC 3.6.1.-)|
           (ATP-dependent helicase rho)
          Length = 602

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 13/35 (37%), Positives = 25/35 (71%)
 Frame = -3

Query: 310 LSSLKVTELRELAKSRGLRGYSKMKKSDLVALLSD 206
           L+++ + ELR LA   G++G S M+K++L+A + +
Sbjct: 37  LATMVLPELRALANRAGVKGTSGMRKNELIAAIEE 71

>RHO_MYCBO (P66029) Transcription termination factor rho (EC 3.6.1.-)|
           (ATP-dependent helicase rho)
          Length = 602

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 13/35 (37%), Positives = 25/35 (71%)
 Frame = -3

Query: 310 LSSLKVTELRELAKSRGLRGYSKMKKSDLVALLSD 206
           L+++ + ELR LA   G++G S M+K++L+A + +
Sbjct: 37  LATMVLPELRALANRAGVKGTSGMRKNELIAAIEE 71

>RHO_BACSU (Q03222) Transcription termination factor rho (EC 3.6.1.-)|
           (ATP-dependent helicase rho)
          Length = 427

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = -3

Query: 325 LEVSDLSSLKVTELRELAKSRGLRGYSKMKKSDLVALLSDAS 200
           + +S L ++K+ EL ELA+   +  YSK+ K +L+  +  A+
Sbjct: 4   VSISSLENMKLKELYELARHYKISYYSKLTKKELIFAILKAN 45

>PP1RA_XENLA (Q6GLQ4) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10
          Length = 819

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -3

Query: 547 PDXPDSVSPYEPDSVIAAEDASLDDFVVPDDESDLLDTSEPD 422
           PD P+S  P  P  +   ED S+DD V P+      ++  PD
Sbjct: 503 PD-PESYEPSPPKLIPLDEDCSMDDGVYPESMDQSTESQSPD 543

>ECR_MANSE (P49883) Ecdysone receptor (Ecdysteroid receptor)|
           (20-hydroxy-ecdysone receptor) (20E receptor) (EcRH)
          Length = 556

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 20/60 (33%), Positives = 34/60 (56%)
 Frame = -3

Query: 331 PSLEVSDLSSLKVTELRELAKSRGLRGYSKMKKSDLVALLSDAS*SVGDANPARAHRFAS 152
           P  ++++++ L V  + E AK  GL G+SK+ +SD + LL  +S  V     AR +  A+
Sbjct: 336 PFRQITEMTILTVQLIVEFAK--GLPGFSKISQSDQITLLKASSSEVMMLRVARRYDAAT 393

>K0174_HUMAN (P53990) Protein KIAA0174 (Putative MAPK-activating protein PM28)|
          Length = 364

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = -3

Query: 523 PYEPDSVIAAEDASLDDFVVPDDESDLLDTSEPDD 419
           PYEPDSV+ AE         P  E+DL+D    DD
Sbjct: 176 PYEPDSVVMAE-------APPGVETDLIDVGFTDD 203

>BIGA_SALTY (P25927) Putative surface-exposed virulence protein bigA precursor|
          Length = 1953

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -3

Query: 547 PDXPDSVSPYEPDSVIAAEDASLDDFVVPDDESDLLDTSEPDD 419
           PD   +V+P +    +   D   DD V P D+S   D + PDD
Sbjct: 110 PDDGGNVTPPDDGGNVTPPDDGGDDNVTPPDDSGDDDVAPPDD 152


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,212,596
Number of Sequences: 219361
Number of extensions: 1186968
Number of successful extensions: 3250
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3246
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4585734400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)