ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags31a24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 220 4e-54
2dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic D... 220 4e-54
3ref|NM_128071.2| Arabidopsis thaliana ATP binding / ATPase/ nucl... 70 1e-08
4gb|AY070722.1| Arabidopsis thaliana At2g25140/F13D4.100 mRNA, co... 70 1e-08
5gb|BT002223.1| Arabidopsis thaliana At2g25140/F13D4.100 mRNA, co... 70 1e-08
6ref|XM_468773.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.14
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.14
8gb|AC137999.2| Oryza sativa chromosome 3 BAC OSJNBa0020H02 genom... 46 0.14
9gb|AC133398.4| Oryza sativa chromosome 3 BAC OSJNBa0083F15 genom... 46 0.14
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
11dbj|AK069123.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.14
12dbj|AK060637.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.14
13dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 44 0.55
14gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.55
15gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome 42 2.2
16gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chr... 42 2.2
17gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.2
18gb|AC130611.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.2
19ref|XM_570285.1| Cryptococcus neoformans var. neoformans JEC21 c... 42 2.2
20gb|AC125329.4| Mus musculus BAC clone RP23-198F7 from 10, comple... 42 2.2
21gb|AY327614.1| Cryptococcus bacillisporus strain B4546 superoxid... 42 2.2
22gb|AY327613.1| Cryptococcus bacillisporus strain NIH312 superoxi... 42 2.2
23gb|U00096.2| Escherichia coli K-12 MG1655, complete genome 42 2.2
24emb|AJ316025.1|OSA316025 Oryza sativa hsp101 gene for heat shock... 42 2.2
25dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome 42 2.2
26gb|AF097363.1| Triticum aestivum heat shock protein 101 (Hsp101b... 42 2.2
27gb|AC105091.3| Homo sapiens chromosome 8, clone RP11-479P21, com... 42 2.2
28gb|AF332981.1|AF332981 Oryza sativa heat shock protein (HSP101) ... 42 2.2
29gb|AC122360.4| Mus musculus BAC clone RP23-428P21 from chromosom... 42 2.2
30gb|M63654.1|ECOORF123 Escherichia coli P177 (o177), bacterioferr... 42 2.2
31gb|AF248051.1|AF248051 Filobasidiella neoformans var. bacillispo... 42 2.2
32gb|AF248050.1|AF248050 Filobasidiella neoformans var. bacillispo... 42 2.2
33gb|AF248048.1|AF248048 Filobasidiella neoformans var. neoformans... 42 2.2
34gb|AF248047.1|AF248047 Filobasidiella neoformans var. neoformans... 42 2.2
35dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
36gb|AF083344.2|AF083344 Triticum aestivum heat shock protein 101 ... 42 2.2
37gb|AC067956.3| Homo sapiens BAC clone RP11-140F14 from 2, comple... 42 2.2
38gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome 42 2.2
39dbj|AK105433.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
40dbj|AK100903.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
41gb|AE000512.1| Thermotoga maritima MSB8, complete genome 42 2.2
42gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 42 2.2
43dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 42 2.2
44dbj|AB209690.1| Homo sapiens mRNA for ADAM 32 precursor (A disin... 42 2.2
45dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 42 2.2
46gb|CP000034.1| Shigella dysenteriae Sd197, complete genome 42 2.2
47gb|CP000036.1| Shigella boydii Sb227, complete genome 42 2.2
48gb|CP000038.1| Shigella sonnei Ss046, complete genome 42 2.2
49ref|NM_114746.2| Arabidopsis thaliana ATCLPC; ATP binding / ATPa... 40 8.6
50gb|AC166773.7| Mus musculus chromosome 7, clone RP24-303J15, com... 40 8.6
51gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 40 8.6
52ref|XM_414378.1| PREDICTED: Gallus gallus similar to RIKEN cDNA ... 40 8.6
53gb|AC115719.10| Mus musculus chromosome 18, clone RP24-356J16, c... 40 8.6
54gb|AC130546.4| Mus musculus BAC clone RP24-303D11 from chromosom... 40 8.6
55gb|BC063747.1| Danio rerio zgc:63648, mRNA (cDNA clone MGC:63648... 40 8.6
56gb|AC008267.6| Homo sapiens BAC clone GS1-124K5 from 7, complete... 40 8.6
57gb|AC141478.3| Mus musculus BAC clone RP24-82N16 from chromosome... 40 8.6
58emb|AL591791.1|SME591791 Sinorhizobium meliloti 1021 complete ch... 40 8.6
59emb|CT009526.6| Pig DNA sequence from clone CH242-219E11 on chro... 40 8.6
60ref|XM_505330.1| Yarrowia lipolytica CLIB122, YALI0F12463g predi... 40 8.6
61emb|AJ320262.1|AFE320262 Acidithiobacillus ferrooxidans partial ... 40 8.6
62emb|CR628362.8| Zebrafish DNA sequence from clone DKEY-74A12 in ... 40 8.6
63ref|XM_793553.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.6
64emb|AL132963.1|ATT21J18 Arabidopsis thaliana DNA chromosome 3, B... 40 8.6
65emb|BX571680.7| Zebrafish DNA sequence from clone DKEY-30L20 in ... 40 8.6
66emb|CR857788.1| Pongo pygmaeus mRNA; cDNA DKFZp469A1115 (from cl... 40 8.6
67gb|AY056787.1| Arabidopsis thaliana AT3g48870/T21J18_140 mRNA, c... 40 8.6
68emb|CR353338.1| Gallus gallus finished cDNA, clone ChEST283e2 40 8.6
69gb|AC092764.3| Pan troglodytes clone RP43-37J6, complete sequence 40 8.6
70ref|NM_200878.1| Danio rerio zgc:63648 (zgc:63648), mRNA 40 8.6
71gb|AC164651.3| Ornithorhynchus anatinus BAC clone OABb-375A1 fro... 40 8.6
72dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome 40 8.6
73dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete... 40 8.6
74gb|AF150932.2| Physcomitrella patens MADS-domain protein PPM1 (p... 40 8.6
75dbj|AB022324.1| Arabidopsis thaliana mRNA for AtClpC, complete cds 40 8.6
76emb|AJ251786.1|ATU251786 Agrobacterium tumefaciens strain C58 pa... 40 8.6
77emb|AJ251785.1|ATU251785 Agrobacterium tumefaciens strain D44 pa... 40 8.6
78emb|CR387935.16| Zebrafish DNA sequence from clone CH211-212O1 i... 40 8.6
79emb|CR318601.8| Zebrafish DNA sequence from clone CH211-274E20 i... 40 8.6
80emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 40 8.6 
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  220 bits (111), Expect = 4e-54
 Identities = 225/263 (85%)
 Strand = Plus / Plus

                                                                           
Query: 104     tctaacctctgaaggaccagctgcttctttggagcaaagcctttggcaatcgacacagag 163
               ||||||||||| ||||| |||| ||||| |||||||| |||||| || |||| ||| |||
Sbjct: 4567873 tctaacctctggaggacaagcttcttctgtggagcaaggcctttcgcgatcgccacggag 4567932

                                                                           
Query: 164     cttacatccaccacaacggtatcatcctccttgaagtcacccttgaggacagcaagagct 223
               || || || || |  ||||| || || || |||||||| ||||| ||||||   || || 
Sbjct: 4567933 ctcacgtcgacgaggacggtgtcgtcttctttgaagtcgcccttcaggacactgagggcg 4567992

                                                                           
Query: 224     atctcgttctccaccatctgctggatcaccctcttgacaggcctagcaccgtagttaggg 283
               ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 4567993 atctcgttctctaccatctgctggatcaccctcttcacaggcctagcaccgtagttaggg 4568052

                                                                           
Query: 284     tcaaagccaagagcgccgagatgctccacagcttccggtgtgtactgaaggtgaatcttc 343
               |||||||| |||| ||| ||||||||||||||||| ||||||||||| || |||||||||
Sbjct: 4568053 tcaaagccgagagagccaagatgctccacagcttctggtgtgtactgcagatgaatcttc 4568112

                                      
Query: 344     tgttgcagcaaccggtttttgac 366
               ||||||  || |||||| |||||
Sbjct: 4568113 tgttgcctcagccggttcttgac 4568135



 Score =  210 bits (106), Expect = 4e-51
 Identities = 208/242 (85%)
 Strand = Plus / Plus

                                                                           
Query: 380     atctccacaatgcgatttatctctgtcgagtccagcggttggaacacaatgtattcatct 439
               |||||||| ||||||||||||||||| | ||||||||| ||||| |||||||| ||||||
Sbjct: 4568284 atctccacgatgcgatttatctctgtggtgtccagcggctggaatacaatgtactcatct 4568343

                                                                           
Query: 440     atcctgttcaggaactctggtcggaatgtctgccgagcaatctcagtcacctgcttcttc 499
               ||||| ||||  |||||||| ||||||| ||||||||| || ||| |||| |||||||||
Sbjct: 4568344 atcctattcaaaaactctggccggaatgactgccgagccatgtcaatcacttgcttcttc 4568403

                                                                           
Query: 500     attacctcatacaccgcatccttgctgtctgttgtgtttctgagtgtgtctagaatcagt 559
               ||||  ||||| || || ||||||||||||| ||||||||| || || || ||||||| |
Sbjct: 4568404 attatttcataaactgcctccttgctgtctgatgtgtttctaagcgtatcaagaatcaat 4568463

                                                                           
Query: 560     ggggagccaatgttggaggtcatgatgatcacacagttggtgaagctcactgttctgccc 619
               || || |||||||| || ||||||||||| |||||||| || ||||| ||||||||||||
Sbjct: 4568464 ggcgacccaatgtttgaagtcatgatgataacacagttagtaaagctgactgttctgccc 4568523

                 
Query: 620     tg 621
               ||
Sbjct: 4568524 tg 4568525
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>dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1297_C09
          Length = 163378

 Score =  220 bits (111), Expect = 4e-54
 Identities = 225/263 (85%)
 Strand = Plus / Plus

                                                                          
Query: 104    tctaacctctgaaggaccagctgcttctttggagcaaagcctttggcaatcgacacagag 163
              ||||||||||| ||||| |||| ||||| |||||||| |||||| || |||| ||| |||
Sbjct: 103252 tctaacctctggaggacaagcttcttctgtggagcaaggcctttcgcgatcgccacggag 103311

                                                                          
Query: 164    cttacatccaccacaacggtatcatcctccttgaagtcacccttgaggacagcaagagct 223
              || || || || |  ||||| || || || |||||||| ||||| ||||||   || || 
Sbjct: 103312 ctcacgtcgacgaggacggtgtcgtcttctttgaagtcgcccttcaggacactgagggcg 103371

                                                                          
Query: 224    atctcgttctccaccatctgctggatcaccctcttgacaggcctagcaccgtagttaggg 283
              ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 103372 atctcgttctctaccatctgctggatcaccctcttcacaggcctagcaccgtagttaggg 103431

                                                                          
Query: 284    tcaaagccaagagcgccgagatgctccacagcttccggtgtgtactgaaggtgaatcttc 343
              |||||||| |||| ||| ||||||||||||||||| ||||||||||| || |||||||||
Sbjct: 103432 tcaaagccgagagagccaagatgctccacagcttctggtgtgtactgcagatgaatcttc 103491

                                     
Query: 344    tgttgcagcaaccggtttttgac 366
              ||||||  || |||||| |||||
Sbjct: 103492 tgttgcctcagccggttcttgac 103514



 Score =  210 bits (106), Expect = 4e-51
 Identities = 208/242 (85%)
 Strand = Plus / Plus

                                                                          
Query: 380    atctccacaatgcgatttatctctgtcgagtccagcggttggaacacaatgtattcatct 439
              |||||||| ||||||||||||||||| | ||||||||| ||||| |||||||| ||||||
Sbjct: 103663 atctccacgatgcgatttatctctgtggtgtccagcggctggaatacaatgtactcatct 103722

                                                                          
Query: 440    atcctgttcaggaactctggtcggaatgtctgccgagcaatctcagtcacctgcttcttc 499
              ||||| ||||  |||||||| ||||||| ||||||||| || ||| |||| |||||||||
Sbjct: 103723 atcctattcaaaaactctggccggaatgactgccgagccatgtcaatcacttgcttcttc 103782

                                                                          
Query: 500    attacctcatacaccgcatccttgctgtctgttgtgtttctgagtgtgtctagaatcagt 559
              ||||  ||||| || || ||||||||||||| ||||||||| || || || ||||||| |
Sbjct: 103783 attatttcataaactgcctccttgctgtctgatgtgtttctaagcgtatcaagaatcaat 103842

                                                                          
Query: 560    ggggagccaatgttggaggtcatgatgatcacacagttggtgaagctcactgttctgccc 619
              || || |||||||| || ||||||||||| |||||||| || ||||| ||||||||||||
Sbjct: 103843 ggcgacccaatgtttgaagtcatgatgataacacagttagtaaagctgactgttctgccc 103902

                
Query: 620    tg 621
              ||
Sbjct: 103903 tg 103904
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>ref|NM_128071.2| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/
            nucleotide binding / protein binding AT2G25140 mRNA,
            complete cds
          Length = 3223

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                        
Query: 224  atctcgttctccaccatctgctggatcaccctcttgacaggcctagcaccgtagttaggg 283
            ||||| |||||||||||||| || ||||| | ||| || ||||| || ||||||||||||
Sbjct: 2913 atctcattctccaccatctgttgaatcactcgcttcaccggccttgccccgtagttaggg 2854

                       
Query: 284  tcaaagccaag 294
            |||||||||||
Sbjct: 2853 tcaaagccaag 2843
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>gb|AY070722.1| Arabidopsis thaliana At2g25140/F13D4.100 mRNA, complete cds
          Length = 3223

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                        
Query: 224  atctcgttctccaccatctgctggatcaccctcttgacaggcctagcaccgtagttaggg 283
            ||||| |||||||||||||| || ||||| | ||| || ||||| || ||||||||||||
Sbjct: 2913 atctcattctccaccatctgttgaatcactcgcttcaccggccttgccccgtagttaggg 2854

                       
Query: 284  tcaaagccaag 294
            |||||||||||
Sbjct: 2853 tcaaagccaag 2843
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>gb|BT002223.1| Arabidopsis thaliana At2g25140/F13D4.100 mRNA, complete cds
          Length = 2895

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                        
Query: 224  atctcgttctccaccatctgctggatcaccctcttgacaggcctagcaccgtagttaggg 283
            ||||| |||||||||||||| || ||||| | ||| || ||||| || ||||||||||||
Sbjct: 2759 atctcattctccaccatctgttgaatcactcgcttcaccggccttgccccgtagttaggg 2700

                       
Query: 284  tcaaagccaag 294
            |||||||||||
Sbjct: 2699 tcaaagccaag 2689
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>ref|XM_468773.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3546

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 572  ttggaggtcatgatgatcacacagttggtgaagctcactgttctgccctgggaatcagt 630
            ||||| |||||||| || | || |||||||||||||||| | |||||||| || |||||
Sbjct: 2654 ttggatgtcatgataatgatactgttggtgaagctcactttcctgccctgcgagtcagt 2596
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                           
Query: 572      ttggaggtcatgatgatcacacagttggtgaagctcactgttctgccctgggaatcagt 630
                ||||| |||||||| || | || |||||||||||||||| | |||||||| || |||||
Sbjct: 17650503 ttggatgtcatgataatgatactgttggtgaagctcactttcctgccctgcgagtcagt 17650445
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>gb|AC137999.2| Oryza sativa chromosome 3 BAC OSJNBa0020H02 genomic sequence,
            complete sequence
          Length = 97152

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 572  ttggaggtcatgatgatcacacagttggtgaagctcactgttctgccctgggaatcagt 630
            ||||| |||||||| || | || |||||||||||||||| | |||||||| || |||||
Sbjct: 4574 ttggatgtcatgataatgatactgttggtgaagctcactttcctgccctgcgagtcagt 4632
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>gb|AC133398.4| Oryza sativa chromosome 3 BAC OSJNBa0083F15 genomic sequence, complete
              sequence
          Length = 136916

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                         
Query: 572    ttggaggtcatgatgatcacacagttggtgaagctcactgttctgccctgggaatcagt 630
              ||||| |||||||| || | || |||||||||||||||| | |||||||| || |||||
Sbjct: 133504 ttggatgtcatgataatgatactgttggtgaagctcactttcctgccctgcgagtcagt 133562
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                           
Query: 572      ttggaggtcatgatgatcacacagttggtgaagctcactgttctgccctgggaatcagt 630
                ||||| |||||||| || | || |||||||||||||||| | |||||||| || |||||
Sbjct: 17644044 ttggatgtcatgataatgatactgttggtgaagctcactttcctgccctgcgagtcagt 17643986
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>dbj|AK069123.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007C17, full
            insert sequence
          Length = 3303

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 572  ttggaggtcatgatgatcacacagttggtgaagctcactgttctgccctgggaatcagt 630
            ||||| |||||||| || | || |||||||||||||||| | |||||||| || |||||
Sbjct: 2654 ttggatgtcatgataatgatactgttggtgaagctcactttcctgccctgcgagtcagt 2596
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>dbj|AK060637.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-D01, full
            insert sequence
          Length = 2290

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 572  ttggaggtcatgatgatcacacagttggtgaagctcactgttctgccctgggaatcagt 630
            ||||| |||||||| || | || |||||||||||||||| | |||||||| || |||||
Sbjct: 1608 ttggatgtcatgataatgatactgttggtgaagctcactttcctgccctgcgagtcagt 1550
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 562     ggagccaatgttggaggtcatgatgatcac 591
               |||||| |||||||| ||||||||||||||
Sbjct: 8636265 ggagccgatgttggacgtcatgatgatcac 8636236
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 563    gagccaatgttggaggtcatgatgat 588
              ||||| ||||||||||||||||||||
Sbjct: 450275 gagccgatgttggaggtcatgatgat 450300
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>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome
          Length = 4607203

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 334     gtgaatcttctgttgcagcaa 354
               |||||||||||||||||||||
Sbjct: 2599307 gtgaatcttctgttgcagcaa 2599287
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>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete
              sequence
          Length = 1783081

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 198    agtcacccttgaggacagcaa 218
              |||||||||||||||||||||
Sbjct: 417427 agtcacccttgaggacagcaa 417447
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>gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0599F04,
              complete sequence
          Length = 169073

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 571    gttggaggtcatgatgatcac 591
              |||||||||||||||||||||
Sbjct: 120732 gttggaggtcatgatgatcac 120752
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>gb|AC130611.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0483D07,
             complete sequence
          Length = 147122

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 571   gttggaggtcatgatgatcac 591
             |||||||||||||||||||||
Sbjct: 16694 gttggaggtcatgatgatcac 16714
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>ref|XM_570285.1| Cryptococcus neoformans var. neoformans JEC21 copper zinc
           superoxide dismutase (CND01490) partial mRNA
          Length = 664

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 198 agtcacccttgaggacagcaa 218
           |||||||||||||||||||||
Sbjct: 112 agtcacccttgaggacagcaa 92
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>gb|AC125329.4| Mus musculus BAC clone RP23-198F7 from 10, complete sequence
          Length = 211931

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 520   cttgctgtctgttgtgtttct 540
             |||||||||||||||||||||
Sbjct: 14694 cttgctgtctgttgtgtttct 14674
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>gb|AY327614.1| Cryptococcus bacillisporus strain B4546 superoxide dismutase (SOD1)
           gene, partial cds
          Length = 830

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 198 agtcacccttgaggacagcaa 218
           |||||||||||||||||||||
Sbjct: 183 agtcacccttgaggacagcaa 163
to top
>gb|AY327613.1| Cryptococcus bacillisporus strain NIH312 superoxide dismutase
           (SOD1) gene, partial cds
          Length = 830

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 198 agtcacccttgaggacagcaa 218
           |||||||||||||||||||||
Sbjct: 183 agtcacccttgaggacagcaa 163
to top
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 334     gtgaatcttctgttgcagcaa 354
               |||||||||||||||||||||
Sbjct: 2609219 gtgaatcttctgttgcagcaa 2609199
to top
>emb|AJ316025.1|OSA316025 Oryza sativa hsp101 gene for heat shock protein 101, exons 1-5
          Length = 3109

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 571  gttggaggtcatgatgatcac 591
            |||||||||||||||||||||
Sbjct: 2351 gttggaggtcatgatgatcac 2331
to top
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 334     gtgaatcttctgttgcagcaa 354
               |||||||||||||||||||||
Sbjct: 2609853 gtgaatcttctgttgcagcaa 2609833
to top
>gb|AF097363.1| Triticum aestivum heat shock protein 101 (Hsp101b) mRNA, complete cds
          Length = 3107

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 571  gttggaggtcatgatgatcac 591
            |||||||||||||||||||||
Sbjct: 2277 gttggaggtcatgatgatcac 2257
to top
>gb|AC105091.3| Homo sapiens chromosome 8, clone RP11-479P21, complete sequence
          Length = 173888

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 132    ttggagcaaagcctttggcaa 152
              |||||||||||||||||||||
Sbjct: 106545 ttggagcaaagcctttggcaa 106565
to top
>gb|AF332981.1|AF332981 Oryza sativa heat shock protein (HSP101) mRNA, complete cds
          Length = 3148

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 571  gttggaggtcatgatgatcac 591
            |||||||||||||||||||||
Sbjct: 2297 gttggaggtcatgatgatcac 2277
to top
>gb|AC122360.4| Mus musculus BAC clone RP23-428P21 from chromosome 10, complete
             sequence
          Length = 210757

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 520   cttgctgtctgttgtgtttct 540
             |||||||||||||||||||||
Sbjct: 50801 cttgctgtctgttgtgtttct 50821
to top
>gb|M63654.1|ECOORF123 Escherichia coli P177 (o177), bacterioferritin comigratory protein
             (bcp), putative hydrogenase-4 complex (hyfABCDEFGHIJR),
             and putative formate transporter (focB) gene, complete cds
             and putative permease P75 (perM) gene partial cds
          Length = 15115

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 334   gtgaatcttctgttgcagcaa 354
             |||||||||||||||||||||
Sbjct: 11264 gtgaatcttctgttgcagcaa 11244
to top
>gb|AF248051.1|AF248051 Filobasidiella neoformans var. bacillispora WM 780-C copper zinc
           superoxide dismutase (SOD1) gene, complete cds
          Length = 1138

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 198 agtcacccttgaggacagcaa 218
           |||||||||||||||||||||
Sbjct: 398 agtcacccttgaggacagcaa 378
to top
>gb|AF248050.1|AF248050 Filobasidiella neoformans var. bacillispora NYS 155B copper zinc
           superoxide dismutase (SOD1) gene, complete cds
          Length = 1824

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 198 agtcacccttgaggacagcaa 218
           |||||||||||||||||||||
Sbjct: 907 agtcacccttgaggacagcaa 887
to top
>gb|AF248048.1|AF248048 Filobasidiella neoformans var. neoformans B-3501 copper zinc
           superoxide dismutase (SOD1) gene, complete cds
          Length = 1915

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 198 agtcacccttgaggacagcaa 218
           |||||||||||||||||||||
Sbjct: 868 agtcacccttgaggacagcaa 848
to top
>gb|AF248047.1|AF248047 Filobasidiella neoformans var. neoformans B-3501 copper zinc
           superoxide dismutase (SOD1) mRNA, complete cds
          Length = 681

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 198 agtcacccttgaggacagcaa 218
           |||||||||||||||||||||
Sbjct: 121 agtcacccttgaggacagcaa 101
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 571      gttggaggtcatgatgatcac 591
                |||||||||||||||||||||
Sbjct: 25604325 gttggaggtcatgatgatcac 25604345
to top
>gb|AF083344.2|AF083344 Triticum aestivum heat shock protein 101 kDa (HSP101) mRNA, complete
            cds
          Length = 2821

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 571  gttggaggtcatgatgatcac 591
            |||||||||||||||||||||
Sbjct: 2230 gttggaggtcatgatgatcac 2210
to top
>gb|AC067956.3| Homo sapiens BAC clone RP11-140F14 from 2, complete sequence
          Length = 171708

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 427    aatgtattcatctatcctgtt 447
              |||||||||||||||||||||
Sbjct: 101738 aatgtattcatctatcctgtt 101758
to top
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome
          Length = 4599354

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 334     gtgaatcttctgttgcagcaa 354
               |||||||||||||||||||||
Sbjct: 2577440 gtgaatcttctgttgcagcaa 2577420
to top
>dbj|AK105433.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-F05, full
            insert sequence
          Length = 3163

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 571  gttggaggtcatgatgatcac 591
            |||||||||||||||||||||
Sbjct: 2352 gttggaggtcatgatgatcac 2332
to top
>dbj|AK100903.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131M05, full
            insert sequence
          Length = 3132

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 571  gttggaggtcatgatgatcac 591
            |||||||||||||||||||||
Sbjct: 2299 gttggaggtcatgatgatcac 2279
to top
>gb|AE000512.1| Thermotoga maritima MSB8, complete genome
          Length = 1860725

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 433    ttcatctatcctgttcaggaactctggtc 461
              |||||| ||||||||||||||||| ||||
Sbjct: 212822 ttcatcgatcctgttcaggaactcaggtc 212794
to top
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 334     gtgaatcttctgttgcagcaa 354
               |||||||||||||||||||||
Sbjct: 3397174 gtgaatcttctgttgcagcaa 3397154
to top
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 571     gttggaggtcatgatgatcac 591
               |||||||||||||||||||||
Sbjct: 3333599 gttggaggtcatgatgatcac 3333619
to top
>dbj|AB209690.1| Homo sapiens mRNA for ADAM 32 precursor (A disintegrin and
            metalloprotease domain 32) variant protein
          Length = 6873

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 132  ttggagcaaagcctttggcaa 152
            |||||||||||||||||||||
Sbjct: 5288 ttggagcaaagcctttggcaa 5308
to top
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 334     gtgaatcttctgttgcagcaa 354
               |||||||||||||||||||||
Sbjct: 3327340 gtgaatcttctgttgcagcaa 3327320
to top
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome
          Length = 4369232

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 334     gtgaatcttctgttgcagcaa 354
               |||||||||||||||||||||
Sbjct: 2470834 gtgaatcttctgttgcagcaa 2470814
to top
>gb|CP000036.1| Shigella boydii Sb227, complete genome
          Length = 4519823

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 334     gtgaatcttctgttgcagcaa 354
               |||||||||||||||||||||
Sbjct: 2504853 gtgaatcttctgttgcagcaa 2504833
to top
>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 334     gtgaatcttctgttgcagcaa 354
               |||||||||||||||||||||
Sbjct: 2713291 gtgaatcttctgttgcagcaa 2713271
to top
>ref|NM_114746.2| Arabidopsis thaliana ATCLPC; ATP binding / ATPase/ DNA binding /
            nuclease/ nucleoside-triphosphatase/ nucleotide binding /
            protein binding AT3G48870 (ATCLPC) mRNA, complete cds
          Length = 3130

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 434  tcatctatcctgttcaggaactctggtc 461
            ||||||| |||||||| |||||||||||
Sbjct: 2598 tcatctaacctgttcaagaactctggtc 2571
to top
>gb|AC166773.7| Mus musculus chromosome 7, clone RP24-303J15, complete sequence
          Length = 193859

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 531    ttgtgtttctgagtgtgtct 550
              ||||||||||||||||||||
Sbjct: 121880 ttgtgtttctgagtgtgtct 121861
to top
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 569     atgttggaggtcatgatgat 588
               ||||||||||||||||||||
Sbjct: 1715030 atgttggaggtcatgatgat 1715011
to top
>ref|XM_414378.1| PREDICTED: Gallus gallus similar to RIKEN cDNA 1200015A22
           (LOC416038), mRNA
          Length = 2964

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 468 tctgccgagcaatctcagtcacct 491
           |||||||||||||| |||||||||
Sbjct: 881 tctgccgagcaatcacagtcacct 858
to top
>gb|AC115719.10| Mus musculus chromosome 18, clone RP24-356J16, complete sequence
          Length = 177037

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 422    aacacaatgtattcatctat 441
              ||||||||||||||||||||
Sbjct: 147003 aacacaatgtattcatctat 146984
to top
>gb|AC130546.4| Mus musculus BAC clone RP24-303D11 from chromosome 3, complete sequence
          Length = 171125

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 368   cgatccagctgtatctccacaatg 391
             |||| |||||||||||||||||||
Sbjct: 71292 cgatgcagctgtatctccacaatg 71315
to top
>gb|BC063747.1| Danio rerio zgc:63648, mRNA (cDNA clone MGC:63648 IMAGE:5605350),
            complete cds
          Length = 2954

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 528  ctgttgtgtttctgagtgtgtcta 551
            ||||||||||| ||||||||||||
Sbjct: 2794 ctgttgtgtttgtgagtgtgtcta 2771
to top
>gb|AC008267.6| Homo sapiens BAC clone GS1-124K5 from 7, complete sequence
          Length = 196954

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 232   ctccaccatctgctggatca 251
             ||||||||||||||||||||
Sbjct: 24679 ctccaccatctgctggatca 24660
to top
>gb|AC141478.3| Mus musculus BAC clone RP24-82N16 from chromosome 18, complete sequence
          Length = 184122

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 422   aacacaatgtattcatctat 441
             ||||||||||||||||||||
Sbjct: 31776 aacacaatgtattcatctat 31757
to top
>emb|AL591791.1|SME591791 Sinorhizobium meliloti 1021 complete chromosome; segment 10/12
          Length = 340900

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 571    gttggaggtcatgatgatca 590
              ||||||||||||||||||||
Sbjct: 108884 gttggaggtcatgatgatca 108903
to top
>emb|CT009526.6| Pig DNA sequence from clone CH242-219E11 on chromosome 17, complete
             sequence
          Length = 100904

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 536   tttctgagtgtgtctagaat 555
             ||||||||||||||||||||
Sbjct: 78988 tttctgagtgtgtctagaat 78969
to top
>ref|XM_505330.1| Yarrowia lipolytica CLIB122, YALI0F12463g predicted mRNA
          Length = 2349

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 565  gccaatgttggaggtcatga 584
            ||||||||||||||||||||
Sbjct: 1926 gccaatgttggaggtcatga 1907
to top
>emb|AJ320262.1|AFE320262 Acidithiobacillus ferrooxidans partial petC2 gene for putative
            cytochrome c1 and hip gene for putative high-redox
            potential iron-sulfur protein (HiPIP)
          Length = 1615

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 358  gtttttgacccgatccagct 377
            ||||||||||||||||||||
Sbjct: 1600 gtttttgacccgatccagct 1581
to top
>emb|CR628362.8| Zebrafish DNA sequence from clone DKEY-74A12 in linkage group 18,
             complete sequence
          Length = 200732

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 529   tgttgtgtttctgagtgtgt 548
             ||||||||||||||||||||
Sbjct: 72854 tgttgtgtttctgagtgtgt 72873
to top
>ref|XM_793553.1| PREDICTED: Strongylocentrotus purpuratus similar to protein
           tyrosine phosphatase, non-receptor type 4 (LOC594103),
           mRNA
          Length = 1803

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 290 ccaagagcgccgagatgctc 309
           ||||||||||||||||||||
Sbjct: 437 ccaagagcgccgagatgctc 456
to top
>emb|AL132963.1|ATT21J18 Arabidopsis thaliana DNA chromosome 3, BAC clone T21J18
          Length = 82912

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 434   tcatctatcctgttcaggaactctggtc 461
             ||||||| |||||||| |||||||||||
Sbjct: 71169 tcatctaacctgttcaagaactctggtc 71196
to top
>emb|BX571680.7| Zebrafish DNA sequence from clone DKEY-30L20 in linkage group 7,
             complete sequence
          Length = 145338

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 528   ctgttgtgtttctgagtgtgtcta 551
             ||||||||||| ||||||||||||
Sbjct: 71825 ctgttgtgtttgtgagtgtgtcta 71848
to top
>emb|CR857788.1| Pongo pygmaeus mRNA; cDNA DKFZp469A1115 (from clone DKFZp469A1115)
          Length = 1727

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 527  tctgttgtgtttctgagtgt 546
            ||||||||||||||||||||
Sbjct: 1652 tctgttgtgtttctgagtgt 1671
to top
>gb|AY056787.1| Arabidopsis thaliana AT3g48870/T21J18_140 mRNA, complete cds
          Length = 3105

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 434  tcatctatcctgttcaggaactctggtc 461
            ||||||| |||||||| |||||||||||
Sbjct: 2599 tcatctaacctgttcaagaactctggtc 2572
to top
>emb|CR353338.1| Gallus gallus finished cDNA, clone ChEST283e2
          Length = 1035

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 468 tctgccgagcaatctcagtcacct 491
           |||||||||||||| |||||||||
Sbjct: 884 tctgccgagcaatcacagtcacct 861
to top
>gb|AC092764.3| Pan troglodytes clone RP43-37J6, complete sequence
          Length = 172761

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 232    ctccaccatctgctggatca 251
              ||||||||||||||||||||
Sbjct: 113136 ctccaccatctgctggatca 113155
to top
>ref|NM_200878.1| Danio rerio zgc:63648 (zgc:63648), mRNA
          Length = 2954

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 528  ctgttgtgtttctgagtgtgtcta 551
            ||||||||||| ||||||||||||
Sbjct: 2794 ctgttgtgtttgtgagtgtgtcta 2771
to top
>gb|AC164651.3| Ornithorhynchus anatinus BAC clone OABb-375A1 from chromosome
            unknown, complete sequence
          Length = 183178

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 611  gttctgccctgggaatcagt 630
            ||||||||||||||||||||
Sbjct: 6073 gttctgccctgggaatcagt 6054
to top
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome
          Length = 3573470

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 566     ccaatgttggaggtcatgat 585
               ||||||||||||||||||||
Sbjct: 2466891 ccaatgttggaggtcatgat 2466910
to top
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome
          Length = 2593857

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 562    ggagccaatgttggaggtcatgat 585
              |||||||||||| |||||||||||
Sbjct: 291203 ggagccaatgttcgaggtcatgat 291226
to top
>gb|AF150932.2| Physcomitrella patens MADS-domain protein PPM1 (ppm1) gene, promoter
            region and complete cds
          Length = 3832

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 513  ccgcatccttgctgtctgttgtgt 536
            ||||||| ||||||||||||||||
Sbjct: 3124 ccgcatctttgctgtctgttgtgt 3147
to top
>dbj|AB022324.1| Arabidopsis thaliana mRNA for AtClpC, complete cds
          Length = 3090

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 434  tcatctatcctgttcaggaactctggtc 461
            ||||||| |||||||| |||||||||||
Sbjct: 2583 tcatctaacctgttcaagaactctggtc 2556
to top
>emb|AJ251786.1|ATU251786 Agrobacterium tumefaciens strain C58 partial vppa gene for putative
           proton-translocating inorganic pyrophosphatase (isoform
           II)
          Length = 567

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 136 agcaaagcctttggcaatcg 155
           ||||||||||||||||||||
Sbjct: 108 agcaaagcctttggcaatcg 89
to top
>emb|AJ251785.1|ATU251785 Agrobacterium tumefaciens strain D44 partial vppa gene for putative
           proton-translocating inorganic pyrophosphatase (isoform
           II)
          Length = 567

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 136 agcaaagcctttggcaatcg 155
           ||||||||||||||||||||
Sbjct: 108 agcaaagcctttggcaatcg 89
to top
>emb|CR387935.16| Zebrafish DNA sequence from clone CH211-212O1 in linkage group 18,
              complete sequence
          Length = 152685

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 529    tgttgtgtttctgagtgtgt 548
              ||||||||||||||||||||
Sbjct: 119914 tgttgtgtttctgagtgtgt 119895
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>emb|CR318601.8| Zebrafish DNA sequence from clone CH211-274E20 in linkage group 7,
              complete sequence
          Length = 165501

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 528    ctgttgtgtttctgagtgtgtcta 551
              ||||||||||| ||||||||||||
Sbjct: 148295 ctgttgtgtttgtgagtgtgtcta 148318
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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 565     gccaatgttggaggtcatga 584
               ||||||||||||||||||||
Sbjct: 1667407 gccaatgttggaggtcatga 1667388


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,775,889
Number of Sequences: 3902068
Number of extensions: 4775889
Number of successful extensions: 91162
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90619
Number of HSP's gapped (non-prelim): 541
length of query: 630
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 607
effective length of database: 17,143,297,704
effective search space: 10405981706328
effective search space used: 10405981706328
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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