| Clone Name | rbags31a22 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK100792.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121D20, full insert sequence Length = 1870 Score = 519 bits (262), Expect = e-144 Identities = 496/574 (86%) Strand = Plus / Minus Query: 126 ggctcagcggaacgaccattgtatctcctcgagcgttcttcccttggtttccggcaccca 185 |||||||||||| |||||||||||||| ||||| |||||||| || || || |||||||| Sbjct: 1679 ggctcagcggaaggaccattgtatctcttcgagagttcttccttttgtctctggcaccca 1620 Query: 186 gaggacgacgaacacgagcgtgaaggcgctcacgagcatgtacgacacaaatgtacctcc 245 |||| |||||||||||| ||||| || ||||||| |||||| |||||||| || ||||| Sbjct: 1619 aaggatgacgaacacgagggtgaaagcactcacgaccatgtaggacacaaaggtccctcc 1560 Query: 246 agcactccagctgagcagcaagtttgccgtcatcgtaatcccgaaggaagtcagccagtt 305 |||||||||||| |||| ||||||||| ||||| || || || ||||| || |||||||| Sbjct: 1559 agcactccagctaagcatcaagtttgctgtcattgttattccaaaggatgtaagccagtt 1500 Query: 306 ggcgagcgtcgcgaagcttcccgcgagactcttgatgctcacggggaggatctctgacat 365 |||||||||||| |||||||| |||||||||||||| || || ||||||||||||||||| Sbjct: 1499 ggcgagcgtcgcaaagcttcctgcgagactcttgatactaaccgggaggatctctgacat 1440 Query: 366 tatgacccatggaatggcacccattccgaaggagaaggcgattacataggccacaatagc 425 ||||| |||||||||||||||||| ||||||||||||||||||||| | ||||||| ||| Sbjct: 1439 tatgatccatggaatggcacccataccgaaggagaaggcgattacaaaagccacaagagc 1380 Query: 426 aagcaaggagaccatgctcaatatgtaatacatgtgagaatcttgtgaaacagtgtcctt 485 || |||||||| ||| || || |||| |||||||||||||||||||||| | ||||| Sbjct: 1379 aaccaaggagatcatacttaaggtgtagtacatgtgagaatcttgtgaaatgctatcctt 1320 Query: 486 gataaaaaatacgacggcaaccgcaagaaggctcagggtcatcccggcagaagagataat 545 || |||||||| || ||||| ||||| ||||| || |||||||| ||||||||||| || Sbjct: 1319 gaggaaaaatacaacagcaactgcaaggaggcttagagtcatcccagcagaagagatgat 1260 Query: 546 gagtagaatccgtcggccagctctgtccagtaaccaggttgtaactagagtggcaagaac 605 || || |||||||||||||||||||| | |||||||||||||||| || |||||||| Sbjct: 1259 aaggaggatccgtcggccagctctgtctaataaccaggttgtaactcctgtagcaagaac 1200 Query: 606 ctgaatacctccaagtccacatgtggccaagtcactgtttgtaatacctgcagctttgaa 665 ||| ||| | |||||| ||||||| ||||||||||||||||| | |||||| |||||||| Sbjct: 1199 ctggatagcaccaagtgcacatgtagccaagtcactgtttgtgagacctgctgctttgaa 1140 Query: 666 gatgctacttgcatagaacagtatagcattgatt 699 |||||||| |||||| |||| ||| |||||||| Sbjct: 1139 gatgctacctgcataaaacaatattccattgatt 1106
>dbj|AK065497.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023P09, full insert sequence Length = 2266 Score = 276 bits (139), Expect = 9e-71 Identities = 382/463 (82%) Strand = Plus / Minus Query: 145 tgtatctcctcgagcgttcttcccttggtttccggcacccagaggacgacgaacacgagc 204 ||||||||||| || ||||||||||| || || |||||||| | | |||||||||||| Sbjct: 1957 tgtatctcctccagagttcttccctttgtctctggcacccaaaatatgacgaacacgaga 1898 Query: 205 gtgaaggcgctcacgagcatgtacgacacaaatgtacctccagcactccagctgagcagc 264 ||||| || ||||| | |||||| |||| |||||| |||||||||||||||||||| | | Sbjct: 1897 gtgaaagcactcacaatcatgtaggacaaaaatgttcctccagcactccagctgagtaac 1838 Query: 265 aagtttgccgtcatcgtaatcccgaaggaagtcagccagttggcgagcgtcgcgaagctt 324 || ||||| ||||| || || | |||| || ||| |||||| || ||||| |||||| Sbjct: 1837 aaatttgctgtcattgttattgcccaggatgtaagcatgttggcaagtgtcgcaaagctt 1778 Query: 325 cccgcgagactcttgatgctcacggggaggatctctgacattatgacccatggaatggca 384 ||| | |||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 1777 cccccaagactcttgatgctaactgggaggatctcagacatcatgacccatggaatggca 1718 Query: 385 cccattccgaaggagaaggcgattacataggccacaatagcaagcaaggagaccatgctc 444 ||||| |||||||| |||| ||| | ||| ||||||| ||||| |||||||| ||| || Sbjct: 1717 cccatgccgaaggaaaaggtgatgatataagccacaagagcaaccaaggagatcatactt 1658 Query: 445 aatatgtaatacatgtgagaatcttgtgaaacagtgtccttgataaaaaatacgacggca 504 || ||||| || |||||||| ||||||| | | ||| | ||||||||| || | Sbjct: 1657 aagatgtagaacgaatgagaatcatgtgaaatattaccctccagaaaaaatacaacagat 1598 Query: 505 accgcaagaaggctcagggtcatcccggcagaagagataatgagtagaatccgtcggcca 564 || ||||||||||| || |||||||| |||| ||||||||| || || |||||||| ||| Sbjct: 1597 actgcaagaaggcttagagtcatcccagcagtagagataataaggagcatccgtcgacca 1538 Query: 565 gctctgtccagtaaccaggttgtaactagagtggcaagaacct 607 ||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 1537 gctctgtccagtaaccatgttgtaactccagtggcaagaacct 1495 Score = 60.0 bits (30), Expect = 1e-05 Identities = 42/46 (91%) Strand = Plus / Minus Query: 604 acctgaatacctccaagtccacatgtggccaagtcactgtttgtaa 649 |||||||| |||| ||| ||||||||||||||||||||||||||| Sbjct: 1420 acctgaattgctcctagtgcacatgtggccaagtcactgtttgtaa 1375 Score = 44.1 bits (22), Expect = 0.61 Identities = 40/46 (86%) Strand = Plus / Minus Query: 650 tacctgcagctttgaagatgctacttgcatagaacagtatagcatt 695 |||||||| || ||||||| ||||||||||| ||||| ||| |||| Sbjct: 1283 tacctgcatctctgaagattctacttgcataaaacagaataccatt 1238
>gb|AY110436.1| Zea mays CL5790_2 mRNA sequence Length = 526 Score = 234 bits (118), Expect = 3e-58 Identities = 223/258 (86%) Strand = Plus / Plus Query: 127 gctcagcggaacgaccattgtatctcctcgagcgttcttcccttggtttccggcacccag 186 |||||||||||||||||||||||||| ||||| ||||||||||| || || |||||||| Sbjct: 269 gctcagcggaacgaccattgtatctcttcgagggttcttccctttgtctctggcacccaa 328 Query: 187 aggacgacgaacacgagcgtgaaggcgctcacgagcatgtacgacacaaatgtacctcca 246 | || ||||||||||| |||||||| ||||| | |||||| || ||| ||||||||| Sbjct: 329 acgattacgaacacgagagtgaaggcactcacaatcatgtaggaggtaaacgtacctcca 388 Query: 247 gcactccagctgagcagcaagtttgccgtcatcgtaatcccgaaggaagtcagccagttg 306 ||||||||||||| |||||| ||||||||||| || || || ||||| |||| ||||||| Sbjct: 389 gcactccagctgatcagcaaatttgccgtcattgttattccaaaggatgtcaaccagttg 448 Query: 307 gcgagcgtcgcgaagcttcccgcgagactcttgatgctcacggggaggatctctgacatt 366 || || |||||||||||||| || |||||||||||||| || ||||||||||| |||||| Sbjct: 449 gcaagggtcgcgaagcttcctgcaagactcttgatgctaactgggaggatctcagacatt 508 Query: 367 atgacccatggaatggca 384 |||| ||| ||||||||| Sbjct: 509 atgatccaaggaatggca 526
>gb|AY111571.1| Zea mays CL5790_1 mRNA sequence Length = 1054 Score = 184 bits (93), Expect = 3e-43 Identities = 321/397 (80%) Strand = Plus / Plus Query: 134 ggaacgaccattgtatctcctcgagcgttcttcccttggtttccggcacccagaggacga 193 |||| ||||| |||||||| || || ||||||||||| || || |||||||| |||| || Sbjct: 350 ggaaggaccactgtatctcttcaagggttcttccctttgtctctggcacccaaaggatga 409 Query: 194 cgaacacgagcgtgaaggcgctcacgagcatgtacgacacaaatgtacctccagcactcc 253 |||| ||||| ||||| || ||||| | |||||| || ||||||||||| |||| |||| Sbjct: 410 cgaagacgagagtgaaagcactcaccatcatgtaggaggcaaatgtacctgcagcgctcc 469 Query: 254 agctgagcagcaagtttgccgtcatcgtaatcccgaaggaagtcagccagttggcgagcg 313 || | || ||||| ||||| ||||| || || || ||||| |||| ||||||||| || | Sbjct: 470 agttcagaagcaaatttgctgtcattgttattccaaaggacgtcaaccagttggcaaggg 529 Query: 314 tcgcgaagcttcccgcgagactcttgatgctcacggggaggatctctgacattatgaccc 373 ||||||||||||| || | || ||||||||| || || |||||||| |||||||||| || Sbjct: 530 tcgcgaagcttcctgccacacacttgatgctaaccggaaggatctcagacattatgatcc 589 Query: 374 atggaatggcacccattccgaaggagaaggcgattacataggccacaatagcaagcaagg 433 ||||||||| |||||| |||||||||||||| | ||||| ||||| | | ||| ||||| Sbjct: 590 atggaatggaacccataccgaaggagaaggcagtgacataagccacgacaccaaccaagg 649 Query: 434 agaccatgctcaatatgtaatacatgtgagaatcttgtgaaacagtgtccttgataaaaa 493 | || || || || |||| |||| || ||| ||||||| || | |||||||| ||| Sbjct: 650 acactattcttaagatgttgtacaagtcagagtcttgtgcaatgttatccttgatgcaaa 709 Query: 494 atacgacggcaaccgcaagaaggctcagggtcatccc 530 |||| || |||| || |||||||| ||||||||||| Sbjct: 710 atacaacaacaactgccagaaggcttagggtcatccc 746 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 652 cctgcagctttgaagatgctac 673 |||||||||||||||||||||| Sbjct: 868 cctgcagctttgaagatgctac 889
>gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1781_H11, complete sequence Length = 204649 Score = 133 bits (67), Expect = 9e-28 Identities = 109/123 (88%) Strand = Plus / Minus Query: 236 atgtacctccagcactccagctgagcagcaagtttgccgtcatcgtaatcccgaaggaag 295 |||||||||||||||||||||| |||| ||||||||| ||||| || || || ||||| | Sbjct: 128783 atgtacctccagcactccagctaagcatcaagtttgctgtcattgttattccaaaggatg 128724 Query: 296 tcagccagttggcgagcgtcgcgaagcttcccgcgagactcttgatgctcacggggagga 355 | |||||||||||||||||||| |||||||| |||||||||||||| || || ||||||| Sbjct: 128723 taagccagttggcgagcgtcgcaaagcttcctgcgagactcttgatactaaccgggagga 128664 Query: 356 tct 358 ||| Sbjct: 128663 tct 128661 Score = 109 bits (55), Expect = 1e-20 Identities = 97/111 (87%) Strand = Plus / Minus Query: 126 ggctcagcggaacgaccattgtatctcctcgagcgttcttcccttggtttccggcaccca 185 |||||||||||| |||||||||||||| ||||| |||||||| || || || |||||||| Sbjct: 129018 ggctcagcggaaggaccattgtatctcttcgagagttcttccttttgtctctggcaccca 128959 Query: 186 gaggacgacgaacacgagcgtgaaggcgctcacgagcatgtacgacacaaa 236 |||| |||||||||||| ||||| || ||||||| |||||| |||||||| Sbjct: 128958 aaggatgacgaacacgagggtgaaagcactcacgaccatgtaggacacaaa 128908 Score = 93.7 bits (47), Expect = 7e-16 Identities = 53/55 (96%) Strand = Plus / Minus Query: 357 ctctgacattatgacccatggaatggcacccattccgaaggagaaggcgattaca 411 |||||||||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 128538 ctctgacattatgatccatggaatggcacccataccgaaggagaaggcgattaca 128484 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 553 atccgtcggccagctctgtccagtaaccaggttgtaactagagtggcaagaacct 607 |||||||| |||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 121044 atccgtcgaccagctctgtccagtaaccatgttgtaactccagtggcaagaacct 120990 Score = 69.9 bits (35), Expect = 1e-08 Identities = 98/119 (82%) Strand = Plus / Minus Query: 240 acctccagcactccagctgagcagcaagtttgccgtcatcgtaatcccgaaggaagtcag 299 ||||||||||||||||||||| | ||| ||||| ||||| || || | |||| || || Sbjct: 121805 acctccagcactccagctgagtaacaaatttgctgtcattgttattgcccaggatgtaag 121746 Query: 300 ccagttggcgagcgtcgcgaagcttcccgcgagactcttgatgctcacggggaggatct 358 | |||||| || ||||| ||||||||| | |||||||||||||| || |||||||||| Sbjct: 121745 catgttggcaagtgtcgcaaagcttcccccaagactcttgatgctaactgggaggatct 121687 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 553 atccgtcggccagctctgtccagtaaccaggttgtaactagagtggcaagaacctga 609 |||||||||||||||||||| | |||||||||||||||| || |||||||||||| Sbjct: 128011 atccgtcggccagctctgtctaataaccaggttgtaactcctgtagcaagaacctga 127955 Score = 61.9 bits (31), Expect = 3e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 145 tgtatctcctcgagcgttcttcccttggtttccggcacccagaggacgacgaacacgagc 204 ||||||||||| || ||||||||||| || || |||||||| | | |||||||||||| Sbjct: 121994 tgtatctcctccagagttcttccctttgtctctggcacccaaaatatgacgaacacgaga 121935 Query: 205 gtgaaggcgctcacgagcatgtacgacacaaatgt 239 ||||| || ||||| | |||||| |||| |||||| Sbjct: 121934 gtgaaagcactcacaatcatgtaggacaaaaatgt 121900 Score = 61.9 bits (31), Expect = 3e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 361 gacattatgacccatggaatggcacccattccgaaggagaagg 403 ||||| ||||||||||||||||||||||| |||||||| |||| Sbjct: 121547 gacatcatgacccatggaatggcacccatgccgaaggaaaagg 121505 Score = 60.0 bits (30), Expect = 1e-05 Identities = 42/46 (91%) Strand = Plus / Minus Query: 604 acctgaatacctccaagtccacatgtggccaagtcactgtttgtaa 649 |||||||| |||| ||| ||||||||||||||||||||||||||| Sbjct: 120915 acctgaattgctcctagtgcacatgtggccaagtcactgtttgtaa 120870 Score = 56.0 bits (28), Expect = 2e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 416 ccacaatagcaagcaaggagaccatgctcaatatgtaatacatgtgagaatcttgtgaaa 475 |||||| ||||| |||||||| ||| || || |||| |||||||||||||||||||||| Sbjct: 128388 ccacaagagcaaccaaggagatcatacttaaggtgtagtacatgtgagaatcttgtgaaa 128329 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 650 tacctgcagctttgaagatgctacttgcatagaacagtatagcattgatt 699 ||||||| |||||||||||||||| |||||| |||| ||| |||||||| Sbjct: 127490 tacctgctgctttgaagatgctacctgcataaaacaatattccattgatt 127441 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 490 aaaaatacgacggcaaccgcaagaaggctcagggtcatcccggcagaagagat 542 |||||||| || ||||| ||||| ||||| || |||||||| ||||||||||| Sbjct: 128156 aaaaatacaacagcaactgcaaggaggcttagagtcatcccagcagaagagat 128104 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Minus Query: 616 ccaagtccacatgtggccaagtcactgtttgt 647 |||||| ||||||| ||||||||||||||||| Sbjct: 127847 ccaagtgcacatgtagccaagtcactgtttgt 127816 Score = 44.1 bits (22), Expect = 0.61 Identities = 40/46 (86%) Strand = Plus / Minus Query: 650 tacctgcagctttgaagatgctacttgcatagaacagtatagcatt 695 |||||||| || ||||||| ||||||||||| ||||| ||| |||| Sbjct: 120778 tacctgcatctctgaagattctacttgcataaaacagaataccatt 120733
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 133 bits (67), Expect = 9e-28 Identities = 109/123 (88%) Strand = Plus / Minus Query: 236 atgtacctccagcactccagctgagcagcaagtttgccgtcatcgtaatcccgaaggaag 295 |||||||||||||||||||||| |||| ||||||||| ||||| || || || ||||| | Sbjct: 28048618 atgtacctccagcactccagctaagcatcaagtttgctgtcattgttattccaaaggatg 28048559 Query: 296 tcagccagttggcgagcgtcgcgaagcttcccgcgagactcttgatgctcacggggagga 355 | |||||||||||||||||||| |||||||| |||||||||||||| || || ||||||| Sbjct: 28048558 taagccagttggcgagcgtcgcaaagcttcctgcgagactcttgatactaaccgggagga 28048499 Query: 356 tct 358 ||| Sbjct: 28048498 tct 28048496 Score = 109 bits (55), Expect = 1e-20 Identities = 97/111 (87%) Strand = Plus / Minus Query: 126 ggctcagcggaacgaccattgtatctcctcgagcgttcttcccttggtttccggcaccca 185 |||||||||||| |||||||||||||| ||||| |||||||| || || || |||||||| Sbjct: 28048853 ggctcagcggaaggaccattgtatctcttcgagagttcttccttttgtctctggcaccca 28048794 Query: 186 gaggacgacgaacacgagcgtgaaggcgctcacgagcatgtacgacacaaa 236 |||| |||||||||||| ||||| || ||||||| |||||| |||||||| Sbjct: 28048793 aaggatgacgaacacgagggtgaaagcactcacgaccatgtaggacacaaa 28048743 Score = 93.7 bits (47), Expect = 7e-16 Identities = 53/55 (96%) Strand = Plus / Minus Query: 357 ctctgacattatgacccatggaatggcacccattccgaaggagaaggcgattaca 411 |||||||||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 28048373 ctctgacattatgatccatggaatggcacccataccgaaggagaaggcgattaca 28048319 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 553 atccgtcggccagctctgtccagtaaccaggttgtaactagagtggcaagaacct 607 |||||||| |||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 28040879 atccgtcgaccagctctgtccagtaaccatgttgtaactccagtggcaagaacct 28040825 Score = 69.9 bits (35), Expect = 1e-08 Identities = 98/119 (82%) Strand = Plus / Minus Query: 240 acctccagcactccagctgagcagcaagtttgccgtcatcgtaatcccgaaggaagtcag 299 ||||||||||||||||||||| | ||| ||||| ||||| || || | |||| || || Sbjct: 28041640 acctccagcactccagctgagtaacaaatttgctgtcattgttattgcccaggatgtaag 28041581 Query: 300 ccagttggcgagcgtcgcgaagcttcccgcgagactcttgatgctcacggggaggatct 358 | |||||| || ||||| ||||||||| | |||||||||||||| || |||||||||| Sbjct: 28041580 catgttggcaagtgtcgcaaagcttcccccaagactcttgatgctaactgggaggatct 28041522 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 553 atccgtcggccagctctgtccagtaaccaggttgtaactagagtggcaagaacctga 609 |||||||||||||||||||| | |||||||||||||||| || |||||||||||| Sbjct: 28047846 atccgtcggccagctctgtctaataaccaggttgtaactcctgtagcaagaacctga 28047790 Score = 61.9 bits (31), Expect = 3e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 145 tgtatctcctcgagcgttcttcccttggtttccggcacccagaggacgacgaacacgagc 204 ||||||||||| || ||||||||||| || || |||||||| | | |||||||||||| Sbjct: 28041829 tgtatctcctccagagttcttccctttgtctctggcacccaaaatatgacgaacacgaga 28041770 Query: 205 gtgaaggcgctcacgagcatgtacgacacaaatgt 239 ||||| || ||||| | |||||| |||| |||||| Sbjct: 28041769 gtgaaagcactcacaatcatgtaggacaaaaatgt 28041735 Score = 61.9 bits (31), Expect = 3e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 361 gacattatgacccatggaatggcacccattccgaaggagaagg 403 ||||| ||||||||||||||||||||||| |||||||| |||| Sbjct: 28041382 gacatcatgacccatggaatggcacccatgccgaaggaaaagg 28041340 Score = 60.0 bits (30), Expect = 1e-05 Identities = 42/46 (91%) Strand = Plus / Minus Query: 604 acctgaatacctccaagtccacatgtggccaagtcactgtttgtaa 649 |||||||| |||| ||| ||||||||||||||||||||||||||| Sbjct: 28040750 acctgaattgctcctagtgcacatgtggccaagtcactgtttgtaa 28040705 Score = 56.0 bits (28), Expect = 2e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 416 ccacaatagcaagcaaggagaccatgctcaatatgtaatacatgtgagaatcttgtgaaa 475 |||||| ||||| |||||||| ||| || || |||| |||||||||||||||||||||| Sbjct: 28048223 ccacaagagcaaccaaggagatcatacttaaggtgtagtacatgtgagaatcttgtgaaa 28048164 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 650 tacctgcagctttgaagatgctacttgcatagaacagtatagcattgatt 699 ||||||| |||||||||||||||| |||||| |||| ||| |||||||| Sbjct: 28047325 tacctgctgctttgaagatgctacctgcataaaacaatattccattgatt 28047276 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 490 aaaaatacgacggcaaccgcaagaaggctcagggtcatcccggcagaagagat 542 |||||||| || ||||| ||||| ||||| || |||||||| ||||||||||| Sbjct: 28047991 aaaaatacaacagcaactgcaaggaggcttagagtcatcccagcagaagagat 28047939 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Minus Query: 616 ccaagtccacatgtggccaagtcactgtttgt 647 |||||| ||||||| ||||||||||||||||| Sbjct: 28047682 ccaagtgcacatgtagccaagtcactgtttgt 28047651 Score = 44.1 bits (22), Expect = 0.61 Identities = 40/46 (86%) Strand = Plus / Minus Query: 650 tacctgcagctttgaagatgctacttgcatagaacagtatagcatt 695 |||||||| || ||||||| ||||||||||| ||||| ||| |||| Sbjct: 28040613 tacctgcatctctgaagattctacttgcataaaacagaataccatt 28040568
>gb|DQ429427.1| Sorghum propinquum locus pSB0945 genomic sequence Length = 762 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 361 gacattatgacccatggaatggcacccattccgaaggagaaggcgattacataggcc 417 |||||||||| ||| |||||||||||||| |||||||||||||| || ||||||||| Sbjct: 648 gacattatgatccaaggaatggcacccataccgaaggagaaggcaatgacataggcc 592 Score = 52.0 bits (26), Expect = 0.003 Identities = 47/54 (87%) Strand = Plus / Minus Query: 556 cgtcggccagctctgtccagtaaccaggttgtaactagagtggcaagaacctga 609 ||||| ||||||||||||| ||| ||||||||| | |||||||||||||||| Sbjct: 111 cgtcgaccagctctgtccaagaacatggttgtaacaacagtggcaagaacctga 58
>gb|DQ429426.1| Sorghum bicolor voucher PI585454 locus pSB0945 genomic sequence Length = 762 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 361 gacattatgacccatggaatggcacccattccgaaggagaaggcgattacataggcc 417 |||||||||| ||| |||||||||||||| |||||||||||||| || ||||||||| Sbjct: 648 gacattatgatccaaggaatggcacccataccgaaggagaaggcaatgacataggcc 592 Score = 52.0 bits (26), Expect = 0.003 Identities = 47/54 (87%) Strand = Plus / Minus Query: 556 cgtcggccagctctgtccagtaaccaggttgtaactagagtggcaagaacctga 609 ||||| ||||||||||||| ||| ||||||||| | |||||||||||||||| Sbjct: 111 cgtcgaccagctctgtccaagaacatggttgtaacaacagtggcaagaacctga 58
>gb|DQ429425.1| Sorghum bicolor voucher PI267539 locus pSB0945 genomic sequence Length = 762 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 361 gacattatgacccatggaatggcacccattccgaaggagaaggcgattacataggcc 417 |||||||||| ||| |||||||||||||| |||||||||||||| || ||||||||| Sbjct: 648 gacattatgatccaaggaatggcacccataccgaaggagaaggcaatgacataggcc 592 Score = 52.0 bits (26), Expect = 0.003 Identities = 47/54 (87%) Strand = Plus / Minus Query: 556 cgtcggccagctctgtccagtaaccaggttgtaactagagtggcaagaacctga 609 ||||| ||||||||||||| ||| ||||||||| | |||||||||||||||| Sbjct: 111 cgtcgaccagctctgtccaagaacatggttgtaacaacagtggcaagaacctga 58
>gb|DQ429424.1| Sorghum bicolor voucher PI267408 locus pSB0945 genomic sequence Length = 762 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 361 gacattatgacccatggaatggcacccattccgaaggagaaggcgattacataggcc 417 |||||||||| ||| |||||||||||||| |||||||||||||| || ||||||||| Sbjct: 648 gacattatgatccaaggaatggcacccataccgaaggagaaggcaatgacataggcc 592 Score = 52.0 bits (26), Expect = 0.003 Identities = 47/54 (87%) Strand = Plus / Minus Query: 556 cgtcggccagctctgtccagtaaccaggttgtaactagagtggcaagaacctga 609 ||||| ||||||||||||| ||| ||||||||| | |||||||||||||||| Sbjct: 111 cgtcgaccagctctgtccaagaacatggttgtaacaacagtggcaagaacctga 58
>gb|DQ429423.1| Sorghum bicolor voucher PI221607 locus pSB0945 genomic sequence Length = 762 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 361 gacattatgacccatggaatggcacccattccgaaggagaaggcgattacataggcc 417 |||||||||| ||| |||||||||||||| |||||||||||||| || ||||||||| Sbjct: 648 gacattatgatccaaggaatggcacccataccgaaggagaaggcaatgacataggcc 592 Score = 52.0 bits (26), Expect = 0.003 Identities = 47/54 (87%) Strand = Plus / Minus Query: 556 cgtcggccagctctgtccagtaaccaggttgtaactagagtggcaagaacctga 609 ||||| ||||||||||||| ||| ||||||||| | |||||||||||||||| Sbjct: 111 cgtcgaccagctctgtccaagaacatggttgtaacaacagtggcaagaacctga 58
>gb|DQ429422.1| Sorghum bicolor voucher PI152702 locus pSB0945 genomic sequence Length = 762 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 361 gacattatgacccatggaatggcacccattccgaaggagaaggcgattacataggcc 417 |||||||||| ||| |||||||||||||| |||||||||||||| || ||||||||| Sbjct: 648 gacattatgatccaaggaatggcacccataccgaaggagaaggcaatgacataggcc 592 Score = 52.0 bits (26), Expect = 0.003 Identities = 47/54 (87%) Strand = Plus / Minus Query: 556 cgtcggccagctctgtccagtaaccaggttgtaactagagtggcaagaacctga 609 ||||| ||||||||||||| ||| ||||||||| | |||||||||||||||| Sbjct: 111 cgtcgaccagctctgtccaagaacatggttgtaacaacagtggcaagaacctga 58
>gb|DQ429421.1| Sorghum bicolor voucher NSL92371 locus pSB0945 genomic sequence Length = 764 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 361 gacattatgacccatggaatggcacccattccgaaggagaaggcgattacataggcc 417 |||||||||| ||| |||||||||||||| |||||||||||||| || ||||||||| Sbjct: 650 gacattatgatccaaggaatggcacccataccgaaggagaaggcaatgacataggcc 594 Score = 52.0 bits (26), Expect = 0.003 Identities = 47/54 (87%) Strand = Plus / Minus Query: 556 cgtcggccagctctgtccagtaaccaggttgtaactagagtggcaagaacctga 609 ||||| ||||||||||||| ||| ||||||||| | |||||||||||||||| Sbjct: 111 cgtcgaccagctctgtccaagaacatggttgtaacaacagtggcaagaacctga 58
>gb|DQ429420.1| Sorghum bicolor voucher NSL87902 locus pSB0945 genomic sequence Length = 762 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 361 gacattatgacccatggaatggcacccattccgaaggagaaggcgattacataggcc 417 |||||||||| ||| |||||||||||||| |||||||||||||| || ||||||||| Sbjct: 648 gacattatgatccaaggaatggcacccataccgaaggagaaggcaatgacataggcc 592 Score = 52.0 bits (26), Expect = 0.003 Identities = 47/54 (87%) Strand = Plus / Minus Query: 556 cgtcggccagctctgtccagtaaccaggttgtaactagagtggcaagaacctga 609 ||||| ||||||||||||| ||| ||||||||| | |||||||||||||||| Sbjct: 111 cgtcgaccagctctgtccaagaacatggttgtaacaacagtggcaagaacctga 58
>gb|DQ429419.1| Sorghum bicolor voucher NSL87666 locus pSB0945 genomic sequence Length = 762 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 361 gacattatgacccatggaatggcacccattccgaaggagaaggcgattacataggcc 417 |||||||||| ||| |||||||||||||| |||||||||||||| || ||||||||| Sbjct: 648 gacattatgatccaaggaatggcacccataccgaaggagaaggcaatgacataggcc 592 Score = 52.0 bits (26), Expect = 0.003 Identities = 47/54 (87%) Strand = Plus / Minus Query: 556 cgtcggccagctctgtccagtaaccaggttgtaactagagtggcaagaacctga 609 ||||| ||||||||||||| ||| ||||||||| | |||||||||||||||| Sbjct: 111 cgtcgaccagctctgtccaagaacatggttgtaacaacagtggcaagaacctga 58
>gb|DQ429418.1| Sorghum bicolor voucher NSL77217 locus pSB0945 genomic sequence Length = 762 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 361 gacattatgacccatggaatggcacccattccgaaggagaaggcgattacataggcc 417 |||||||||| ||| |||||||||||||| |||||||||||||| || ||||||||| Sbjct: 648 gacattatgatccaaggaatggcacccataccgaaggagaaggcaatgacataggcc 592 Score = 52.0 bits (26), Expect = 0.003 Identities = 47/54 (87%) Strand = Plus / Minus Query: 556 cgtcggccagctctgtccagtaaccaggttgtaactagagtggcaagaacctga 609 ||||| ||||||||||||| ||| ||||||||| | |||||||||||||||| Sbjct: 111 cgtcgaccagctctgtccaagaacatggttgtaacaacagtggcaagaacctga 58
>gb|DQ429417.1| Sorghum bicolor voucher NSL77034 locus pSB0945 genomic sequence Length = 762 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 361 gacattatgacccatggaatggcacccattccgaaggagaaggcgattacataggcc 417 |||||||||| ||| |||||||||||||| |||||||||||||| || ||||||||| Sbjct: 648 gacattatgatccaaggaatggcacccataccgaaggagaaggcaatgacataggcc 592 Score = 52.0 bits (26), Expect = 0.003 Identities = 47/54 (87%) Strand = Plus / Minus Query: 556 cgtcggccagctctgtccagtaaccaggttgtaactagagtggcaagaacctga 609 ||||| ||||||||||||| ||| ||||||||| | |||||||||||||||| Sbjct: 111 cgtcgaccagctctgtccaagaacatggttgtaacaacagtggcaagaacctga 58
>gb|DQ429416.1| Sorghum bicolor voucher NSL56174 locus pSB0945 genomic sequence Length = 762 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 361 gacattatgacccatggaatggcacccattccgaaggagaaggcgattacataggcc 417 |||||||||| ||| |||||||||||||| |||||||||||||| || ||||||||| Sbjct: 648 gacattatgatccaaggaatggcacccataccgaaggagaaggcaatgacataggcc 592 Score = 52.0 bits (26), Expect = 0.003 Identities = 47/54 (87%) Strand = Plus / Minus Query: 556 cgtcggccagctctgtccagtaaccaggttgtaactagagtggcaagaacctga 609 ||||| ||||||||||||| ||| ||||||||| | |||||||||||||||| Sbjct: 111 cgtcgaccagctctgtccaagaacatggttgtaacaacagtggcaagaacctga 58
>gb|DQ429415.1| Sorghum bicolor voucher NSL56003 locus pSB0945 genomic sequence Length = 762 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 361 gacattatgacccatggaatggcacccattccgaaggagaaggcgattacataggcc 417 |||||||||| ||| |||||||||||||| |||||||||||||| || ||||||||| Sbjct: 648 gacattatgatccaaggaatggcacccataccgaaggagaaggcaatgacataggcc 592 Score = 52.0 bits (26), Expect = 0.003 Identities = 47/54 (87%) Strand = Plus / Minus Query: 556 cgtcggccagctctgtccagtaaccaggttgtaactagagtggcaagaacctga 609 ||||| ||||||||||||| ||| ||||||||| | |||||||||||||||| Sbjct: 111 cgtcgaccagctctgtccaagaacatggttgtaacaacagtggcaagaacctga 58
>gb|DQ429414.1| Sorghum bicolor voucher NSL55243 locus pSB0945 genomic sequence Length = 762 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 361 gacattatgacccatggaatggcacccattccgaaggagaaggcgattacataggcc 417 |||||||||| ||| |||||||||||||| |||||||||||||| || ||||||||| Sbjct: 648 gacattatgatccaaggaatggcacccataccgaaggagaaggcaatgacataggcc 592 Score = 52.0 bits (26), Expect = 0.003 Identities = 47/54 (87%) Strand = Plus / Minus Query: 556 cgtcggccagctctgtccagtaaccaggttgtaactagagtggcaagaacctga 609 ||||| ||||||||||||| ||| ||||||||| | |||||||||||||||| Sbjct: 111 cgtcgaccagctctgtccaagaacatggttgtaacaacagtggcaagaacctga 58
>gb|DQ429413.1| Sorghum bicolor voucher NSL51365 locus pSB0945 genomic sequence Length = 764 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 361 gacattatgacccatggaatggcacccattccgaaggagaaggcgattacataggcc 417 |||||||||| ||| |||||||||||||| |||||||||||||| || ||||||||| Sbjct: 650 gacattatgatccaaggaatggcacccataccgaaggagaaggcaatgacataggcc 594 Score = 52.0 bits (26), Expect = 0.003 Identities = 47/54 (87%) Strand = Plus / Minus Query: 556 cgtcggccagctctgtccagtaaccaggttgtaactagagtggcaagaacctga 609 ||||| ||||||||||||| ||| ||||||||| | |||||||||||||||| Sbjct: 111 cgtcgaccagctctgtccaagaacatggttgtaacaacagtggcaagaacctga 58
>gb|DQ429412.1| Sorghum bicolor voucher NSL51030 locus pSB0945 genomic sequence Length = 762 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 361 gacattatgacccatggaatggcacccattccgaaggagaaggcgattacataggcc 417 |||||||||| ||| |||||||||||||| |||||||||||||| || ||||||||| Sbjct: 648 gacattatgatccaaggaatggcacccataccgaaggagaaggcaatgacataggcc 592 Score = 52.0 bits (26), Expect = 0.003 Identities = 47/54 (87%) Strand = Plus / Minus Query: 556 cgtcggccagctctgtccagtaaccaggttgtaactagagtggcaagaacctga 609 ||||| ||||||||||||| ||| ||||||||| | |||||||||||||||| Sbjct: 111 cgtcgaccagctctgtccaagaacatggttgtaacaacagtggcaagaacctga 58
>gb|DQ429411.1| Sorghum bicolor voucher NSL50875 locus pSB0945 genomic sequence Length = 762 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 361 gacattatgacccatggaatggcacccattccgaaggagaaggcgattacataggcc 417 |||||||||| ||| |||||||||||||| |||||||||||||| || ||||||||| Sbjct: 648 gacattatgatccaaggaatggcacccataccgaaggagaaggcaatgacataggcc 592 Score = 52.0 bits (26), Expect = 0.003 Identities = 47/54 (87%) Strand = Plus / Minus Query: 556 cgtcggccagctctgtccagtaaccaggttgtaactagagtggcaagaacctga 609 ||||| ||||||||||||| ||| ||||||||| | |||||||||||||||| Sbjct: 111 cgtcgaccagctctgtccaagaacatggttgtaacaacagtggcaagaacctga 58
>gb|DQ429410.1| Sorghum bicolor voucher BTx623 locus pSB0945 genomic sequence Length = 762 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 361 gacattatgacccatggaatggcacccattccgaaggagaaggcgattacataggcc 417 |||||||||| ||| |||||||||||||| |||||||||||||| || ||||||||| Sbjct: 648 gacattatgatccaaggaatggcacccataccgaaggagaaggcaatgacataggcc 592 Score = 52.0 bits (26), Expect = 0.003 Identities = 47/54 (87%) Strand = Plus / Minus Query: 556 cgtcggccagctctgtccagtaaccaggttgtaactagagtggcaagaacctga 609 ||||| ||||||||||||| ||| ||||||||| | |||||||||||||||| Sbjct: 111 cgtcgaccagctctgtccaagaacatggttgtaacaacagtggcaagaacctga 58
>ref|XM_961730.1| PREDICTED: Tribolium castaneum similar to CG1213-PA, isoform A (LOC655214), mRNA Length = 1398 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 148 atctcctcgagcgttcttcccttggtttccggcac 182 |||||||| |||||| | ||||||||||||||||| Sbjct: 1352 atctcctccagcgttttccccttggtttccggcac 1318
>ref|NM_111387.2| Arabidopsis thaliana carbohydrate transporter/ sugar porter AT3G05150 mRNA, complete cds Length = 1624 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Minus Query: 355 atctctgacattatgacccatggaatggcacccattcc 392 ||||| |||||||| |||||||| || ||||||||||| Sbjct: 1238 atctcagacattataacccatgggattgcacccattcc 1201
>emb|X73684.1|STSTP1 S.tuberosum mRNA for leaf type L starch phosphorylase Length = 3171 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 33 ccttcatcagaggaagaatcct 54 |||||||||||||||||||||| Sbjct: 292 ccttcatcagaggaagaatcct 271
>emb|AL121890.34|HS1116H23 Human DNA sequence from clone RP5-1116H23 on chromosome 20 Contains the 5' end of the SLC23A2 gene for solute carrier family 23 (nucleobase transporters) member 2, the 3' end of the C20orf30 gene fpr HSPC274 protein, an RPS21 (ribosomal protein S21) pseudogene and two CpG islands, complete sequence Length = 120426 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 gcactccagctgagcagcaag 267 ||||||||||||||||||||| Sbjct: 1564 gcactccagctgagcagcaag 1584
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 Length = 2324132 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 419 caatagcaagcaaggagacca 439 ||||||||||||||||||||| Sbjct: 2086602 caatagcaagcaaggagacca 2086582
>gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence Length = 317137 Score = 42.1 bits (21), Expect = 2.4 Identities = 39/45 (86%) Strand = Plus / Plus Query: 565 gctctgtccagtaaccaggttgtaactagagtggcaagaacctga 609 |||||||||| ||| ||||||||| | |||||||||||||||| Sbjct: 258295 gctctgtccaagaacatggttgtaacaaaagtggcaagaacctga 258339
>gb|DQ234870.1| Pomatostomus temporalis clone Pte24 microsatellite sequence Length = 390 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 ttgtacaaaagaaaaacaat 81 |||||||||||||||||||| Sbjct: 369 ttgtacaaaagaaaaacaat 350
>ref|XM_519253.1| PREDICTED: Pan troglodytes stromal antigen 3 (LOC463593), mRNA Length = 4224 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 agaaaaacaatgcccaactc 90 |||||||||||||||||||| Sbjct: 4038 agaaaaacaatgcccaactc 4019
>gb|AY927032.1| Plethodon montanus clone P.montPRFA10 receptivity factor PRFA10 (PRF) mRNA, complete cds Length = 648 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 atctctgacattatgaccca 374 |||||||||||||||||||| Sbjct: 451 atctctgacattatgaccca 470
>ref|XM_655126.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2614.2), mRNA Length = 1587 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 166 cccttggtttccggcacccagagg 189 |||||||||||||| ||||||||| Sbjct: 1445 cccttggtttccggaacccagagg 1422
>ref|NM_012447.2| Homo sapiens stromal antigen 3 (STAG3), mRNA Length = 4285 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 agaaaaacaatgcccaactc 90 |||||||||||||||||||| Sbjct: 3979 agaaaaacaatgcccaactc 3960
>gb|AC166820.2| Mus musculus BAC clone RP24-287O2 from chromosome 15, complete sequence Length = 137033 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 gaagccatgcggtaaaaaattgct 121 ||||||||||| |||||||||||| Sbjct: 58707 gaagccatgcgttaaaaaattgct 58684
>gb|AC009177.7|ATAC009177 Arabidopsis thaliana chromosome III BAC T12H1 genomic sequence, complete sequence Length = 140064 Score = 40.1 bits (20), Expect = 9.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 361 gacattatgacccatggaatggcacccattcc 392 |||||||| |||||||| || ||||||||||| Sbjct: 38958 gacattataacccatgggattgcacccattcc 38927
>gb|AC127559.6| Mus musculus BAC clone RP24-255M7 from chromosome 6, complete sequence Length = 158864 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 653 ctgcagctttgaagatgcta 672 |||||||||||||||||||| Sbjct: 82526 ctgcagctttgaagatgcta 82545
>emb|CR956379.5| Pig DNA sequence from clone CH242-196P11 on chromosome 7, complete sequence Length = 200057 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aatcctcatggacttgtaca 68 |||||||||||||||||||| Sbjct: 117232 aatcctcatggacttgtaca 117213
>emb|AL355305.9| Human DNA sequence from clone RP11-487F23 on chromosome 6 Contains the 5' end of the gene for p53 regulated PA26 nuclear protein (PA26-T1), a novel gene and part of a novel gene, complete sequence Length = 185257 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 aatatgtaatacatgtgaga 464 |||||||||||||||||||| Sbjct: 134607 aatatgtaatacatgtgaga 134626
>emb|AL030995.1|HS1170D6 Human DNA sequence from clone RP5-1170D6 on chromosome Xq22.3-23 Contains a peptidyl-prolyl isomerase G (cyclophilin G) (PPIG) pseudogene, complete sequence Length = 115564 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 627 tgtggccaagtcactgtttg 646 |||||||||||||||||||| Sbjct: 41480 tgtggccaagtcactgtttg 41461
>emb|BX571659.1| Wolinella succinogenes, complete genome; segment 3/7 Length = 349970 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 tgaaggcgctcacgagcatg 225 |||||||||||||||||||| Sbjct: 130577 tgaaggcgctcacgagcatg 130596
>emb|AL833816.1|HSM805090 Homo sapiens mRNA; cDNA DKFZp434L233 (from clone DKFZp434L233) Length = 3666 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 agaaaaacaatgcccaactc 90 |||||||||||||||||||| Sbjct: 3360 agaaaaacaatgcccaactc 3341
>emb|CR859654.1| Pongo pygmaeus mRNA; cDNA DKFZp459M019 (from clone DKFZp459M019) Length = 2169 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 agaaaaacaatgcccaactc 90 |||||||||||||||||||| Sbjct: 1922 agaaaaacaatgcccaactc 1903
>emb|CR857425.1| Pongo pygmaeus mRNA; cDNA DKFZp469F2024 (from clone DKFZp469F2024) Length = 3050 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 agaaaaacaatgcccaactc 90 |||||||||||||||||||| Sbjct: 2812 agaaaaacaatgcccaactc 2793
>emb|CR857133.1| Pongo pygmaeus mRNA; cDNA DKFZp469F2021 (from clone DKFZp469F2021) Length = 3146 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 agaaaaacaatgcccaactc 90 |||||||||||||||||||| Sbjct: 2898 agaaaaacaatgcccaactc 2879
>dbj|AK127069.1| Homo sapiens cDNA FLJ45126 fis, clone BRAWH3036738 Length = 3882 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 agaaaaacaatgcccaactc 90 |||||||||||||||||||| Sbjct: 3378 agaaaaacaatgcccaactc 3397
>dbj|AK055274.1| Homo sapiens cDNA FLJ30712 fis, clone FCBBF2001400 Length = 2564 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 agaaaaacaatgcccaactc 90 |||||||||||||||||||| Sbjct: 2402 agaaaaacaatgcccaactc 2421 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 agaaaaacaatgcccaactc 90 |||||||||||||||||||| Sbjct: 1124 agaaaaacaatgcccaactc 1143
>gb|DQ429908.1| Sorghum propinquum locus pSB1469 genomic sequence Length = 813 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 catgcggtaaaaaattgcta 122 |||||||||||||||||||| Sbjct: 175 catgcggtaaaaaattgcta 156
>gb|DQ429907.1| Sorghum bicolor voucher PI585454 locus pSB1469 genomic sequence Length = 767 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 catgcggtaaaaaattgcta 122 |||||||||||||||||||| Sbjct: 140 catgcggtaaaaaattgcta 121
>gb|DQ429906.1| Sorghum bicolor voucher PI267539 locus pSB1469 genomic sequence Length = 777 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 catgcggtaaaaaattgcta 122 |||||||||||||||||||| Sbjct: 140 catgcggtaaaaaattgcta 121
>gb|DQ429905.1| Sorghum bicolor voucher PI267408 locus pSB1469 genomic sequence Length = 767 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 catgcggtaaaaaattgcta 122 |||||||||||||||||||| Sbjct: 140 catgcggtaaaaaattgcta 121
>gb|DQ429904.1| Sorghum bicolor voucher PI221607 locus pSB1469 genomic sequence Length = 767 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 catgcggtaaaaaattgcta 122 |||||||||||||||||||| Sbjct: 140 catgcggtaaaaaattgcta 121
>gb|DQ429903.1| Sorghum bicolor voucher PI152702 locus pSB1469 genomic sequence Length = 767 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 catgcggtaaaaaattgcta 122 |||||||||||||||||||| Sbjct: 140 catgcggtaaaaaattgcta 121
>gb|DQ429902.1| Sorghum bicolor voucher NSL92371 locus pSB1469 genomic sequence Length = 767 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 catgcggtaaaaaattgcta 122 |||||||||||||||||||| Sbjct: 140 catgcggtaaaaaattgcta 121
>gb|DQ429901.1| Sorghum bicolor voucher NSL87902b locus pSB1469 genomic sequence Length = 767 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 catgcggtaaaaaattgcta 122 |||||||||||||||||||| Sbjct: 140 catgcggtaaaaaattgcta 121
>gb|DQ429900.1| Sorghum bicolor voucher NSL87902a locus pSB1469 genomic sequence Length = 767 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 catgcggtaaaaaattgcta 122 |||||||||||||||||||| Sbjct: 140 catgcggtaaaaaattgcta 121
>gb|DQ429899.1| Sorghum bicolor voucher NSL87666 locus pSB1469 genomic sequence Length = 767 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 catgcggtaaaaaattgcta 122 |||||||||||||||||||| Sbjct: 140 catgcggtaaaaaattgcta 121
>gb|DQ429898.1| Sorghum bicolor voucher NSL77217 locus pSB1469 genomic sequence Length = 767 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 catgcggtaaaaaattgcta 122 |||||||||||||||||||| Sbjct: 140 catgcggtaaaaaattgcta 121
>gb|DQ429897.1| Sorghum bicolor voucher NSL77034 locus pSB1469 genomic sequence Length = 767 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 catgcggtaaaaaattgcta 122 |||||||||||||||||||| Sbjct: 140 catgcggtaaaaaattgcta 121
>gb|DQ429896.1| Sorghum bicolor voucher NSL56174 locus pSB1469 genomic sequence Length = 767 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 catgcggtaaaaaattgcta 122 |||||||||||||||||||| Sbjct: 140 catgcggtaaaaaattgcta 121
>gb|DQ429895.1| Sorghum bicolor voucher NSL56003 locus pSB1469 genomic sequence Length = 767 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 catgcggtaaaaaattgcta 122 |||||||||||||||||||| Sbjct: 140 catgcggtaaaaaattgcta 121
>gb|DQ429894.1| Sorghum bicolor voucher NSL55243 locus pSB1469 genomic sequence Length = 767 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 catgcggtaaaaaattgcta 122 |||||||||||||||||||| Sbjct: 140 catgcggtaaaaaattgcta 121
>gb|DQ429893.1| Sorghum bicolor voucher NSL51365 locus pSB1469 genomic sequence Length = 767 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 catgcggtaaaaaattgcta 122 |||||||||||||||||||| Sbjct: 140 catgcggtaaaaaattgcta 121
>gb|DQ429892.1| Sorghum bicolor voucher NSL51030 locus pSB1469 genomic sequence Length = 767 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 catgcggtaaaaaattgcta 122 |||||||||||||||||||| Sbjct: 140 catgcggtaaaaaattgcta 121
>gb|DQ429891.1| Sorghum bicolor voucher NSL50875 locus pSB1469 genomic sequence Length = 767 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 catgcggtaaaaaattgcta 122 |||||||||||||||||||| Sbjct: 140 catgcggtaaaaaattgcta 121
>gb|DQ429890.1| Sorghum bicolor voucher BTx623 locus pSB1469 genomic sequence Length = 767 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 catgcggtaaaaaattgcta 122 |||||||||||||||||||| Sbjct: 140 catgcggtaaaaaattgcta 121
>ref|NG_001543.1| Homo sapiens peptidyl prolyl isomerase H (cyclophilin H) pseudogene (LOC139466) on chromosome X Length = 95479 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 627 tgtggccaagtcactgtttg 646 |||||||||||||||||||| Sbjct: 32436 tgtggccaagtcactgtttg 32417
>gb|AC157521.2| Mus musculus BAC clone RP23-103M13 from chromosome 15, complete sequence Length = 194306 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 gaagccatgcggtaaaaaattgct 121 ||||||||||| |||||||||||| Sbjct: 9709 gaagccatgcgttaaaaaattgct 9686
>emb|AJ007798.2|HSA007798 Homo sapiens mRNA for stromal antigen 3 (STAG3 gene) Length = 4290 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 agaaaaacaatgcccaactc 90 |||||||||||||||||||| Sbjct: 4071 agaaaaacaatgcccaactc 4052
>gb|AC005071.2|AC005071 Homo sapiens clone RG161A02, complete sequence Length = 209382 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 agaaaaacaatgcccaactc 90 |||||||||||||||||||| Sbjct: 11467 agaaaaacaatgcccaactc 11448
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 299 gccagttggcgagcgtcgcgaagc 322 |||||| ||||||||||||||||| Sbjct: 2721603 gccagtcggcgagcgtcgcgaagc 2721580
>emb|CT025842.2| Medicago truncatula chromosome 5 clone mth2-54i22, COMPLETE SEQUENCE Length = 111922 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 taatacatgtgagaatcttg 470 |||||||||||||||||||| Sbjct: 71943 taatacatgtgagaatcttg 71962
>gb|BC028684.1| Homo sapiens cDNA clone IMAGE:4829833, containing frame-shift errors Length = 4201 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 agaaaaacaatgcccaactc 90 |||||||||||||||||||| Sbjct: 3966 agaaaaacaatgcccaactc 3947
>gb|BC047490.1| Homo sapiens cDNA clone IMAGE:5295486, containing frame-shift errors Length = 4207 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 agaaaaacaatgcccaactc 90 |||||||||||||||||||| Sbjct: 3972 agaaaaacaatgcccaactc 3953
>gb|AC133200.3| Mus musculus BAC clone RP23-292C19 from 3, complete sequence Length = 229751 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 aatatgtaatacatgtgaga 464 |||||||||||||||||||| Sbjct: 110195 aatatgtaatacatgtgaga 110176
>gb|L43510.1|PEAORF Pisum sativum L. (clone na-481-5) mRNA, complete cds Length = 2188 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 cttcatcagaggaagaatcctcat 57 ||||||||||||||||||| |||| Sbjct: 666 cttcatcagaggaagaatcttcat 643
>emb|AL731814.13| Mouse DNA sequence from clone RP23-109J20 on chromosome 2, complete sequence Length = 210821 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 acacaaatgtacctccagca 249 |||||||||||||||||||| Sbjct: 20071 acacaaatgtacctccagca 20052
>gb|U03247.1|HSU03247 Human chromosome 21 clone pVC1.17c Length = 356 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 ccagaggacgacgaacacga 202 |||||||||||||||||||| Sbjct: 193 ccagaggacgacgaacacga 212 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,727,649 Number of Sequences: 3902068 Number of extensions: 5727649 Number of successful extensions: 102082 Number of sequences better than 10.0: 79 Number of HSP's better than 10.0 without gapping: 79 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 101814 Number of HSP's gapped (non-prelim): 268 length of query: 699 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 676 effective length of database: 17,143,297,704 effective search space: 11588869247904 effective search space used: 11588869247904 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)