>gb|BT009543.1| Triticum aestivum clone wr1.pk0153.d9:fis, full insert mRNA
           sequence
          Length = 1074

 Score =  283 bits (143), Expect = 1e-73
 Identities = 232/260 (89%), Gaps = 9/260 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgcacaagtactggttttcaaaggttgtagaaccacaacagaaacatcattcgcatcca 60
           ||||||||||||||||||||||||||   | |||||||| | ||||||| ||||||||||
Sbjct: 946 atgcacaagtactggttttcaaaggt---ataaccacaa-ataaacatccttcgcatcca 891

                                                                       
Query: 61  ggcgtccagatgaagttgtatcaagctcgc-----ttnagccccaagcggcagatcggac 115
           | | ||||||| ||||| |||||||||| |     |  |||||||||||||| ||||| |
Sbjct: 890 gacatccagataaagttctatcaagctcaccacactacagccccaagcggcaaatcgggc 831

                                                                       
Query: 116 tgttcttgatcacattgaagtcgacctttggcccaaagagatcccgtatgttgtcaatct 175
           || ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| 
Sbjct: 830 tgctcttgatcagattgaagtcgacctttggcccaaagagatcacgtatgttgtcaatcc 771

                                                                       
Query: 176 gatacataatcattgttggcctttcaagtgaaagaccccatgcgataacattaacaccct 235
            ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 770 catacagaatcattgttggcctttcaagcgaaagaccccatgcgataacattaacaccct 711

                               
Query: 236 ctggcagtcccatgggaagt 255
           ||||||||||||||||||||
Sbjct: 710 ctggcagtcccatgggaagt 691

>ref|NM_196382.1| Oryza sativa (japonica cultivar-group) putative phenylalanyl-tRNA
            synthetase alpha chain (OSJNBa0050N08.23), mRNA
          Length = 1572

 Score =  133 bits (67), Expect = 3e-28
 Identities = 136/159 (85%)
 Strand = Plus / Minus

                                                                        
Query: 97   cccaagcggcagatcggactgttcttgatcacattgaagtcgacctttggcccaaagaga 156
            |||||||||||||  ||  || ||||||| |  ||||| || |||||||| |||||||| 
Sbjct: 1562 cccaagcggcagagagggttgctcttgatgaggttgaaatcaacctttggtccaaagagg 1503

                                                                        
Query: 157  tcccgtatgttgtcaatctgatacataatcattgttggcctttcaagtgaaagaccccat 216
            || || |||||||| ||    || | |||||||||||||||||| |||||||||||||||
Sbjct: 1502 tctcgaatgttgtcgatgccgtaaagaatcattgttggcctttctagtgaaagaccccat 1443

                                                   
Query: 217  gcgataacattaacaccctctggcagtcccatgggaagt 255
            || ||||||||||||||||||||||||||||||||||||
Sbjct: 1442 gcaataacattaacaccctctggcagtcccatgggaagt 1404

>dbj|AK068126.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129C16, full
            insert sequence
          Length = 2056

 Score =  133 bits (67), Expect = 3e-28
 Identities = 136/159 (85%)
 Strand = Plus / Minus

                                                                        
Query: 97   cccaagcggcagatcggactgttcttgatcacattgaagtcgacctttggcccaaagaga 156
            |||||||||||||  ||  || ||||||| |  ||||| || |||||||| |||||||| 
Sbjct: 1640 cccaagcggcagagagggttgctcttgatgaggttgaaatcaacctttggtccaaagagg 1581

                                                                        
Query: 157  tcccgtatgttgtcaatctgatacataatcattgttggcctttcaagtgaaagaccccat 216
            || || |||||||| ||    || | |||||||||||||||||| |||||||||||||||
Sbjct: 1580 tctcgaatgttgtcgatgccgtaaagaatcattgttggcctttctagtgaaagaccccat 1521

                                                   
Query: 217  gcgataacattaacaccctctggcagtcccatgggaagt 255
            || ||||||||||||||||||||||||||||||||||||
Sbjct: 1520 gcaataacattaacaccctctggcagtcccatgggaagt 1482

>dbj|AK058484.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-D07, full
           insert sequence
          Length = 1222

 Score =  133 bits (67), Expect = 3e-28
 Identities = 136/159 (85%)
 Strand = Plus / Minus

                                                                       
Query: 97  cccaagcggcagatcggactgttcttgatcacattgaagtcgacctttggcccaaagaga 156
           |||||||||||||  ||  || ||||||| |  ||||| || |||||||| |||||||| 
Sbjct: 923 cccaagcggcagagagggttgctcttgatgaggttgaaatcaacctttggtccaaagagg 864

                                                                       
Query: 157 tcccgtatgttgtcaatctgatacataatcattgttggcctttcaagtgaaagaccccat 216
           || || |||||||| ||    || | |||||||||||||||||| |||||||||||||||
Sbjct: 863 tctcgaatgttgtcgatgccgtaaagaatcattgttggcctttctagtgaaagaccccat 804

                                                  
Query: 217 gcgataacattaacaccctctggcagtcccatgggaagt 255
           || ||||||||||||||||||||||||||||||||||||
Sbjct: 803 gcaataacattaacaccctctggcagtcccatgggaagt 765

>gb|AY104305.1| Zea mays PCO070985 mRNA sequence
          Length = 1329

 Score =  121 bits (61), Expect = 1e-24
 Identities = 109/125 (87%)
 Strand = Plus / Minus

                                                                       
Query: 130 ttgaagtcgacctttggcccaaagagatcccgtatgttgtcaatctgatacataatcatt 189
           ||||| || |||||||| ||||| || |||| ||||||||| ||   ||| |  ||||| 
Sbjct: 922 ttgaaatcaacctttggtccaaacaggtcccttatgttgtcgataccataaaggatcatc 863

                                                                       
Query: 190 gttggcctttcaagtgaaagaccccatgcgataacattaacaccctctggcagtcccatg 249
           ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 862 gttggcctttcaagtgaaagaccccatgcaataacattaacaccttctggcagtcccatg 803

                
Query: 250 ggaag 254
           |||||
Sbjct: 802 ggaag 798

>gb|AC021891.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0050N08,
              complete sequence
          Length = 144593

 Score =  105 bits (53), Expect = 7e-20
 Identities = 59/61 (96%)
 Strand = Plus / Plus

                                                                          
Query: 195    cctttcaagtgaaagaccccatgcgataacattaacaccctctggcagtcccatgggaag 254
              |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 121965 cctttctagtgaaagaccccatgcaataacattaacaccctctggcagtcccatgggaag 122024

               
Query: 255    t 255
              |
Sbjct: 122025 t 122025

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  105 bits (53), Expect = 7e-20
 Identities = 59/61 (96%)
 Strand = Plus / Plus

                                                                            
Query: 195      cctttcaagtgaaagaccccatgcgataacattaacaccctctggcagtcccatgggaag 254
                |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 13023049 cctttctagtgaaagaccccatgcaataacattaacaccctctggcagtcccatgggaag 13023108

                 
Query: 255      t 255
                |
Sbjct: 13023109 t 13023109

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  105 bits (53), Expect = 7e-20
 Identities = 59/61 (96%)
 Strand = Plus / Plus

                                                                            
Query: 195      cctttcaagtgaaagaccccatgcgataacattaacaccctctggcagtcccatgggaag 254
                |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 13030389 cctttctagtgaaagaccccatgcaataacattaacaccctctggcagtcccatgggaag 13030448

                 
Query: 255      t 255
                |
Sbjct: 13030449 t 13030449

>ref|XM_663085.1| Cryptosporidium hominis TU502 phenylalanyl-trna synthetase-like
            protein (Chro.30378) partial mRNA
          Length = 1530

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 182  taatcattgttggcctttcaagtgaaagaccccatgc 218
            ||||||| |||||||||||||| ||||| ||||||||
Sbjct: 1471 taatcatcgttggcctttcaagagaaagtccccatgc 1435

>ref|XM_626883.1| Cryptosporidium parvum Iowa II putative phenylalanyl-tRNA synthetase
            (cgd3_3320), partial mRNA
          Length = 1545

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 182  taatcattgttggcctttcaagtgaaagaccccatgc 218
            ||||||| |||||||||||||| ||||| ||||||||
Sbjct: 1486 taatcatcgttggcctttcaagagaaagcccccatgc 1450

>ref|NM_120089.3| Arabidopsis thaliana ATP binding / phenylalanine-tRNA ligase
            AT4G39280 mRNA, complete cds
          Length = 1655

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 184  atcattgttggcctttcaagtgaaagaccccatgcgat 221
            ||||||||||| |||||||| || |||||||| |||||
Sbjct: 1382 atcattgttggtctttcaagagagagaccccaagcgat 1345

>gb|BT015558.1| Arabidopsis thaliana At4g39280 mRNA sequence
          Length = 1455

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 184  atcattgttggcctttcaagtgaaagaccccatgcgat 221
            ||||||||||| |||||||| || |||||||| |||||
Sbjct: 1361 atcattgttggtctttcaagagagagaccccaagcgat 1324

>gb|BT014739.1| Arabidopsis thaliana At4g39280.1 mRNA sequence
          Length = 1455

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 184  atcattgttggcctttcaagtgaaagaccccatgcgat 221
            ||||||||||| |||||||| || |||||||| |||||
Sbjct: 1361 atcattgttggtctttcaagagagagaccccaagcgat 1324

>gb|AY094460.1| Arabidopsis thaliana AT4g39280/T22F8_180 mRNA, complete cds
          Length = 1603

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 184  atcattgttggcctttcaagtgaaagaccccatgcgat 221
            ||||||||||| |||||||| || |||||||| |||||
Sbjct: 1382 atcattgttggtctttcaagagagagaccccaagcgat 1345

>emb|BX826939.1|CNS0A42A Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB78ZE07 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1609

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 184  atcattgttggcctttcaagtgaaagaccccatgcgat 221
            ||||||||||| |||||||| || |||||||| |||||
Sbjct: 1380 atcattgttggtctttcaagagagagaccccaagcgat 1343

>gb|BT002310.1| Arabidopsis thaliana At4g39280/T22F8_180 mRNA, complete cds
          Length = 1458

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 184  atcattgttggcctttcaagtgaaagaccccatgcgat 221
            ||||||||||| |||||||| || |||||||| |||||
Sbjct: 1364 atcattgttggtctttcaagagagagaccccaagcgat 1327

>emb|AL844548.7| Mouse DNA sequence from clone RP23-263D22 on chromosome 2, complete
             sequence
          Length = 198946

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 185   tcattgttggcctttcaagtgaaag 209
             |||||||||||||||| ||||||||
Sbjct: 88559 tcattgttggcctttccagtgaaag 88583

>ref|XM_477619.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1943

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 29  tagaaccacaacagaaacatcatt 52
           ||||||||||| ||||||||||||
Sbjct: 891 tagaaccacaaaagaaacatcatt 868

>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 150     aaagagatcccgtatgttgt 169
               ||||||||||||||||||||
Sbjct: 4988695 aaagagatcccgtatgttgt 4988676

>dbj|AB110202.1| Oryza sativa (japonica cultivar-group) mRNA for RNA helicase,
           partial cds, clone: pNS-FP40
          Length = 1494

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 29  tagaaccacaacagaaacatcatt 52
           ||||||||||| ||||||||||||
Sbjct: 431 tagaaccacaaaagaaacatcatt 408

>gb|AC022479.3|AC022479 Homo sapiens BAC clone RP11-217F11 from 3, complete sequence
          Length = 156535

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 196   ctttcaagtgaaagacccca 215
             ||||||||||||||||||||
Sbjct: 32031 ctttcaagtgaaagacccca 32050

>gb|AC092988.6| Homo sapiens 3 BAC RP11-217F11 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 156528

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 196   ctttcaagtgaaagacccca 215
             ||||||||||||||||||||
Sbjct: 32030 ctttcaagtgaaagacccca 32049

>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 150     aaagagatcccgtatgttgt 169
               ||||||||||||||||||||
Sbjct: 5055764 aaagagatcccgtatgttgt 5055745

>dbj|AK073463.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041I11, full
           insert sequence
          Length = 1942

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 29  tagaaccacaacagaaacatcatt 52
           ||||||||||| ||||||||||||
Sbjct: 891 tagaaccacaaaagaaacatcatt 868

>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome
          Length = 4303871

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 61      ggcgtccagatgaagttgta 80
               ||||||||||||||||||||
Sbjct: 2982425 ggcgtccagatgaagttgta 2982444


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,779,224
Number of Sequences: 3902068
Number of extensions: 1779224
Number of successful extensions: 32312
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 32237
Number of HSP's gapped (non-prelim): 74
length of query: 255
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 233
effective length of database: 17,147,199,772
effective search space: 3995297546876
effective search space used: 3995297546876
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)