ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags31a08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_549834.1| Oryza sativa (japonica cultivar-group), mRNA 583 e-163
2dbj|AK100613.1| Oryza sativa (japonica cultivar-group) cDNA clon... 583 e-163
3dbj|AK058683.1| Oryza sativa (japonica cultivar-group) cDNA clon... 583 e-163
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 190 4e-45
5dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic D... 190 4e-45
6dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic D... 190 4e-45
7dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic D... 153 9e-34
8gb|AY111781.1| Zea mays CL39869_1 mRNA sequence 86 2e-13
9gb|AC147234.3| Mus musculus BAC clone RP24-500F11 from chromosom... 52 0.002
10emb|AL672074.19| Mouse DNA sequence from clone RP23-404I18 on ch... 46 0.15
11gb|AY241132.1| Capsicum annuum deetiolated 1-like protein mRNA, ... 44 0.58
12gb|AC105459.1| Homo sapiens BAC clone RP11-115D14 from 7, comple... 42 2.3
13emb|BX511008.19| Zebrafish DNA sequence from clone DKEY-109I21 i... 42 2.3
14emb|BX890572.9| Zebrafish DNA sequence from clone CH211-234F20 i... 42 2.3
15emb|CR388147.13| Zebrafish DNA sequence from clone DKEYP-72E1 in... 42 2.3
16emb|BX511155.25| Zebrafish DNA sequence from clone DKEY-56D18 in... 42 2.3
17gb|AC166286.14| Medicago truncatula clone mth2-173c1, complete s... 42 2.3
18gb|AC146058.2| Pan troglodytes BAC clone RP43-92A10 from chromos... 42 2.3
19gb|AF292105.1|AF292105 Sus scrofa uteroferrin (ACP5) gene, compl... 42 2.3
20gb|AC148867.3| Monodelphis domestica clone VMRC6-379O2, complete... 42 2.3
21gb|AC147975.3| Pan troglodytes BAC clone CH251-510J15 from chrom... 42 2.3
22emb|CR545478.6| Zebrafish DNA sequence from clone DKEY-124A17 in... 42 2.3
23gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold 42 2.3
24ref|XM_631773.1| Dictyostelium discoideum PFAS (DDB0230086), par... 40 9.1
25gb|AC114003.4| Mus musculus chromosome 18 clone RP23-174C24, com... 40 9.1
26ref|XM_456894.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 9.1
27gb|AC101652.8| Mus musculus chromosome 1, clone RP23-58D20, comp... 40 9.1
28gb|AC108401.19| Mus musculus chromosome 12, clone RP24-98A23, co... 40 9.1
29emb|BX950181.11| Zebrafish DNA sequence from clone DKEY-28O19 in... 40 9.1
30emb|AL929325.7| Human DNA sequence from clone CTD-2194M22 on chr... 40 9.1
31emb|AL513205.8| Human DNA sequence from clone RP11-432E18 on chr... 40 9.1
32emb|AL359894.9| Human DNA sequence from clone RP11-379C1 on chro... 40 9.1
33emb|AL356737.9| Human DNA sequence from clone RP11-118A1 on chro... 40 9.1
34emb|AL354775.12| Human DNA sequence from clone RP11-223F20 on ch... 40 9.1
35gb|U00096.2| Escherichia coli K-12 MG1655, complete genome 40 9.1
36gb|AC079944.17| Homo sapiens 3 BAC RP11-435F17 (Roswell Park Can... 40 9.1
37emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS... 40 9.1
38emb|CR318584.8| Zebrafish DNA sequence from clone CH211-123F21 i... 40 9.1
39dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome 40 9.1
40gb|AC012602.4| Homo sapiens chromosome 5 clone CTC-328N13, compl... 40 9.1
41emb|BX255965.12| Zebrafish DNA sequence from clone CH211-270C19,... 40 9.1
42gb|AC090021.21| Homo sapiens 12 BAC RP11-569H7 (Roswell Park Can... 40 9.1
43gb|AC007365.3| Homo sapiens BAC clone RP11-451M22 from 2, comple... 40 9.1
44gb|AY092414.2| Solanum tuberosum deetiolated 1-like protein mRNA... 40 9.1
45gb|AC109182.14| Mus musculus chromosome 7, clone RP23-223O9, com... 40 9.1
46gb|AC008970.4|AC008970 Homo sapiens chromosome 5 clone CTD-2374C... 40 9.1
47gb|AC006160.9|AC006160 Homo sapiens chromosome 4 clone C0481P14 ... 40 9.1
48dbj|AP001822.4| Homo sapiens genomic DNA, chromosome 11q clone:C... 40 9.1
49gb|AC134445.3| Mus musculus BAC clone RP24-170M15 from 6, comple... 40 9.1
50gb|AC133599.3| Mus musculus BAC clone RP24-390N10 from 6, comple... 40 9.1
51gb|AC132082.3| Mus musculus BAC clone RP24-511K23 from 1, comple... 40 9.1
52gb|U70214.1|ECU70214 Escherichia coli chromosome minutes 4-6 40 9.1
53emb|AL591373.8| Mouse DNA sequence from clone RP23-268M6 on chro... 40 9.1
54gb|CP000038.1| Shigella sonnei Ss046, complete genome 40 9.1
55gb|AC166354.3| Mus musculus BAC clone RP24-283P23 from chromosom... 40 9.1
56dbj|AP002534.1| Homo sapiens genomic DNA, chromosome 1q22-q23, C... 40 9.1
57dbj|AB045361.1| Homo sapiens genomic DNA, chromosome 1q22-q23, c... 40 9.1 
>ref|XM_549834.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1809

 Score =  583 bits (294), Expect = e-163
 Identities = 452/505 (89%)
 Strand = Plus / Minus

                                                                        
Query: 160  ctatctcctgaaatgtatattgacaacagttggctgcatatatgtctgctgaatcgacag 219
            ||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||
Sbjct: 1666 ctatctcctgaaatgtaaattgacaacagttggctgcatatatgtctgctgaatagaaag 1607

                                                                        
Query: 220  tgcaagcgggaaatatgggtgaaacaagaaggaagagattctttttgctcggctgtcgga 279
            ||| || |||||| |||||||||||||||||||||| ||||||||||| | |||||| ||
Sbjct: 1606 tgcgagagggaaaaatgggtgaaacaagaaggaagatattctttttgccctgctgtcaga 1547

                                                                        
Query: 280  agcaccagaatctgaccctggttttatcttaaatttgacgacatttggttgcctcactga 339
            ||||||||||||||| |||||||||||||| |||||||| |||||||| ||  |||||||
Sbjct: 1546 agcaccagaatctgaacctggttttatcttgaatttgacaacatttggctgtttcactga 1487

                                                                        
Query: 340  tataaattttatcggatgctctgtgcaatgcctatgccgatcaatcgctgaaatcagctt 399
            |||||||||||| ||||||||||| || || || ||||||||||||||||||||||||||
Sbjct: 1486 tataaattttattggatgctctgtacagtgtctgtgccgatcaatcgctgaaatcagctt 1427

                                                                        
Query: 400  ctcatcataacgaaaaatcgacaggtcaaagtatggtgaaggactttgtgattggcaagt 459
            ||||||||| ||||| |  || |||||||||||||| ||||||||||||||||| |||||
Sbjct: 1426 ctcatcataccgaaacaatgataggtcaaagtatggcgaaggactttgtgattgacaagt 1367

                                                                        
Query: 460  gtaaggcaatgacgccatcatctttttcacaaactgtgatgagctgcttgctttattttt 519
            |||||| | |||||||||||||||||||||||||||||| | |||| |||||||||||||
Sbjct: 1366 gtaaggtagtgacgccatcatctttttcacaaactgtgaggtgctgtttgctttattttt 1307

                                                                        
Query: 520  aatggtgcggagttgatcaagagcatgaacactattggaatgtgatgagataaatttctc 579
            ||| || || |||||||| |||||||||||| ||||||||||||| |||||||| ||  |
Sbjct: 1306 aattgtccgaagttgatcgagagcatgaacattattggaatgtgacgagataaaatttcc 1247

                                                                        
Query: 580  atgcaaagaattttgaggatttgcatggaaatgatcataataatgttcaaacaatgaata 639
            |||| | |||||||| |||||||  || ||||| |||||| ||| |||||||||||||||
Sbjct: 1246 atgcgatgaattttgtggatttgtgtgaaaatggtcataaaaatattcaaacaatgaata 1187

                                     
Query: 640  tagctnctccgaagaattctgatag 664
             |||| |||||||||||||||||||
Sbjct: 1186 gagctcctccgaagaattctgatag 1162
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>dbj|AK100613.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107M18, full
            insert sequence
          Length = 2112

 Score =  583 bits (294), Expect = e-163
 Identities = 452/505 (89%)
 Strand = Plus / Minus

                                                                        
Query: 160  ctatctcctgaaatgtatattgacaacagttggctgcatatatgtctgctgaatcgacag 219
            ||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||
Sbjct: 1969 ctatctcctgaaatgtaaattgacaacagttggctgcatatatgtctgctgaatagaaag 1910

                                                                        
Query: 220  tgcaagcgggaaatatgggtgaaacaagaaggaagagattctttttgctcggctgtcgga 279
            ||| || |||||| |||||||||||||||||||||| ||||||||||| | |||||| ||
Sbjct: 1909 tgcgagagggaaaaatgggtgaaacaagaaggaagatattctttttgccctgctgtcaga 1850

                                                                        
Query: 280  agcaccagaatctgaccctggttttatcttaaatttgacgacatttggttgcctcactga 339
            ||||||||||||||| |||||||||||||| |||||||| |||||||| ||  |||||||
Sbjct: 1849 agcaccagaatctgaacctggttttatcttgaatttgacaacatttggctgtttcactga 1790

                                                                        
Query: 340  tataaattttatcggatgctctgtgcaatgcctatgccgatcaatcgctgaaatcagctt 399
            |||||||||||| ||||||||||| || || || ||||||||||||||||||||||||||
Sbjct: 1789 tataaattttattggatgctctgtacagtgtctgtgccgatcaatcgctgaaatcagctt 1730

                                                                        
Query: 400  ctcatcataacgaaaaatcgacaggtcaaagtatggtgaaggactttgtgattggcaagt 459
            ||||||||| ||||| |  || |||||||||||||| ||||||||||||||||| |||||
Sbjct: 1729 ctcatcataccgaaacaatgataggtcaaagtatggcgaaggactttgtgattgacaagt 1670

                                                                        
Query: 460  gtaaggcaatgacgccatcatctttttcacaaactgtgatgagctgcttgctttattttt 519
            |||||| | |||||||||||||||||||||||||||||| | |||| |||||||||||||
Sbjct: 1669 gtaaggtagtgacgccatcatctttttcacaaactgtgaggtgctgtttgctttattttt 1610

                                                                        
Query: 520  aatggtgcggagttgatcaagagcatgaacactattggaatgtgatgagataaatttctc 579
            ||| || || |||||||| |||||||||||| ||||||||||||| |||||||| ||  |
Sbjct: 1609 aattgtccgaagttgatcgagagcatgaacattattggaatgtgacgagataaaatttcc 1550

                                                                        
Query: 580  atgcaaagaattttgaggatttgcatggaaatgatcataataatgttcaaacaatgaata 639
            |||| | |||||||| |||||||  || ||||| |||||| ||| |||||||||||||||
Sbjct: 1549 atgcgatgaattttgtggatttgtgtgaaaatggtcataaaaatattcaaacaatgaata 1490

                                     
Query: 640  tagctnctccgaagaattctgatag 664
             |||| |||||||||||||||||||
Sbjct: 1489 gagctcctccgaagaattctgatag 1465
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>dbj|AK058683.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-A06, full
            insert sequence
          Length = 1809

 Score =  583 bits (294), Expect = e-163
 Identities = 452/505 (89%)
 Strand = Plus / Minus

                                                                        
Query: 160  ctatctcctgaaatgtatattgacaacagttggctgcatatatgtctgctgaatcgacag 219
            ||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||
Sbjct: 1666 ctatctcctgaaatgtaaattgacaacagttggctgcatatatgtctgctgaatagaaag 1607

                                                                        
Query: 220  tgcaagcgggaaatatgggtgaaacaagaaggaagagattctttttgctcggctgtcgga 279
            ||| || |||||| |||||||||||||||||||||| ||||||||||| | |||||| ||
Sbjct: 1606 tgcgagagggaaaaatgggtgaaacaagaaggaagatattctttttgccctgctgtcaga 1547

                                                                        
Query: 280  agcaccagaatctgaccctggttttatcttaaatttgacgacatttggttgcctcactga 339
            ||||||||||||||| |||||||||||||| |||||||| |||||||| ||  |||||||
Sbjct: 1546 agcaccagaatctgaacctggttttatcttgaatttgacaacatttggctgtttcactga 1487

                                                                        
Query: 340  tataaattttatcggatgctctgtgcaatgcctatgccgatcaatcgctgaaatcagctt 399
            |||||||||||| ||||||||||| || || || ||||||||||||||||||||||||||
Sbjct: 1486 tataaattttattggatgctctgtacagtgtctgtgccgatcaatcgctgaaatcagctt 1427

                                                                        
Query: 400  ctcatcataacgaaaaatcgacaggtcaaagtatggtgaaggactttgtgattggcaagt 459
            ||||||||| ||||| |  || |||||||||||||| ||||||||||||||||| |||||
Sbjct: 1426 ctcatcataccgaaacaatgataggtcaaagtatggcgaaggactttgtgattgacaagt 1367

                                                                        
Query: 460  gtaaggcaatgacgccatcatctttttcacaaactgtgatgagctgcttgctttattttt 519
            |||||| | |||||||||||||||||||||||||||||| | |||| |||||||||||||
Sbjct: 1366 gtaaggtagtgacgccatcatctttttcacaaactgtgaggtgctgtttgctttattttt 1307

                                                                        
Query: 520  aatggtgcggagttgatcaagagcatgaacactattggaatgtgatgagataaatttctc 579
            ||| || || |||||||| |||||||||||| ||||||||||||| |||||||| ||  |
Sbjct: 1306 aattgtccgaagttgatcgagagcatgaacattattggaatgtgacgagataaaatttcc 1247

                                                                        
Query: 580  atgcaaagaattttgaggatttgcatggaaatgatcataataatgttcaaacaatgaata 639
            |||| | |||||||| |||||||  || ||||| |||||| ||| |||||||||||||||
Sbjct: 1246 atgcgatgaattttgtggatttgtgtgaaaatggtcataaaaatattcaaacaatgaata 1187

                                     
Query: 640  tagctnctccgaagaattctgatag 664
             |||| |||||||||||||||||||
Sbjct: 1186 gagctcctccgaagaattctgatag 1162
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  190 bits (96), Expect = 4e-45
 Identities = 129/140 (92%)
 Strand = Plus / Minus

                                                                            
Query: 160      ctatctcctgaaatgtatattgacaacagttggctgcatatatgtctgctgaatcgacag 219
                ||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||
Sbjct: 16694669 ctatctcctgaaatgtaaattgacaacagttggctgcatatatgtctgctgaatagaaag 16694610

                                                                            
Query: 220      tgcaagcgggaaatatgggtgaaacaagaaggaagagattctttttgctcggctgtcgga 279
                ||| || |||||| |||||||||||||||||||||| ||||||||||| | |||||| ||
Sbjct: 16694609 tgcgagagggaaaaatgggtgaaacaagaaggaagaaattctttttgccctgctgtcaga 16694550

                                    
Query: 280      agcaccagaatctgaccctg 299
                ||||||||||||||| ||||
Sbjct: 16694549 agcaccagaatctgaacctg 16694530



 Score =  190 bits (96), Expect = 4e-45
 Identities = 129/140 (92%)
 Strand = Plus / Plus

                                                                          
Query: 160    ctatctcctgaaatgtatattgacaacagttggctgcatatatgtctgctgaatcgacag 219
              ||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||
Sbjct: 247971 ctatctcctgaaatgtaaattgacaacagttggctgcatatatgtctgctgaatagaaag 248030

                                                                          
Query: 220    tgcaagcgggaaatatgggtgaaacaagaaggaagagattctttttgctcggctgtcgga 279
              ||| || |||||| |||||||||||||||||||||| ||||||||||| | |||||| ||
Sbjct: 248031 tgcgagagggaaaaatgggtgaaacaagaaggaagatattctttttgccctgctgtcaga 248090

                                  
Query: 280    agcaccagaatctgaccctg 299
              ||||||||||||||| ||||
Sbjct: 248091 agcaccagaatctgaacctg 248110



 Score =  161 bits (81), Expect = 4e-36
 Identities = 146/168 (86%)
 Strand = Plus / Minus

                                                                            
Query: 493      ctgtgatgagctgcttgctttatttttaatggtgcggagttgatcaagagcatgaacact 552
                |||||| ||||||||||||||||||||||| || || |||||||| |||||||||||| |
Sbjct: 16693061 ctgtgaggagctgcttgctttatttttaattgtccgaagttgatcgagagcatgaacatt 16693002

                                                                            
Query: 553      attggaatgtgatgagataaatttctcatgcaaagaattttgaggatttgcatggaaatg 612
                |||||||||||| |||||||| ||  ||||| | |||||||| |||||||  || |||||
Sbjct: 16693001 attggaatgtgacgagataaaatttccatgcgatgaattttgtggatttgtgtgaaaatg 16692942

                                                                
Query: 613      atcataataatgttcaaacaatgaatatagctnctccgaagaattctg 660
                 |||||| ||| ||||||||||||||| || | |||||||||||||||
Sbjct: 16692941 gtcataaaaatattcaaacaatgaatagagttcctccgaagaattctg 16692894



 Score =  153 bits (77), Expect = 9e-34
 Identities = 145/168 (86%)
 Strand = Plus / Plus

                                                                          
Query: 493    ctgtgatgagctgcttgctttatttttaatggtgcggagttgatcaagagcatgaacact 552
              |||||| | |||| |||||||||||||||| || || |||||||| |||||||||||| |
Sbjct: 249617 ctgtgaggtgctgtttgctttatttttaattgtccgaagttgatcgagagcatgaacatt 249676

                                                                          
Query: 553    attggaatgtgatgagataaatttctcatgcaaagaattttgaggatttgcatggaaatg 612
              |||||||||||| |||||||| ||  ||||| | |||||||| |||||||  || |||||
Sbjct: 249677 attggaatgtgacgagataaaatttccatgcgatgaattttgtggatttgtgtgaaaatg 249736

                                                              
Query: 613    atcataataatgttcaaacaatgaatatagctnctccgaagaattctg 660
               |||||| ||| ||||||||||||||| |||| |||||||||||||||
Sbjct: 249737 gtcataaaaatattcaaacaatgaatagagctcctccgaagaattctg 249784



 Score =  125 bits (63), Expect = 2e-25
 Identities = 90/99 (90%)
 Strand = Plus / Plus

                                                                          
Query: 397    cttctcatcataacgaaaaatcgacaggtcaaagtatggtgaaggactttgtgattggca 456
              |||||||||||| ||||| |  || |||||||||||||| ||||||||||||||||| ||
Sbjct: 248861 cttctcatcataccgaaacaatgataggtcaaagtatggcgaaggactttgtgattgaca 248920

                                                     
Query: 457    agtgtaaggcaatgacgccatcatctttttcacaaactg 495
              ||||||||| | |||||||||||||||||||||||||||
Sbjct: 248921 agtgtaaggtagtgacgccatcatctttttcacaaactg 248959



 Score =  125 bits (63), Expect = 2e-25
 Identities = 93/103 (90%)
 Strand = Plus / Plus

                                                                          
Query: 296    cctggttttatcttaaatttgacgacatttggttgcctcactgatataaattttatcgga 355
              |||||||||||||| |||||||| |||||||| ||  ||||||||||||||||||| |||
Sbjct: 248368 cctggttttatcttgaatttgacaacatttggctgtttcactgatataaattttattgga 248427

                                                         
Query: 356    tgctctgtgcaatgcctatgccgatcaatcgctgaaatcagct 398
              |||||||| || || || |||||||||||||||||||||||||
Sbjct: 248428 tgctctgtacagtgtctgtgccgatcaatcgctgaaatcagct 248470



 Score =  115 bits (58), Expect = 2e-22
 Identities = 70/74 (94%)
 Strand = Plus / Minus

                                                                            
Query: 422      aggtcaaagtatggtgaaggactttgtgattggcaagtgtaaggcaatgacgccatcatc 481
                |||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||
Sbjct: 16693769 aggtcaaagtatggtgaaggactttgtgattgacaagtgtaaggtagtgacgccatcatc 16693710

                              
Query: 482      tttttcacaaactg 495
                ||||| ||||||||
Sbjct: 16693709 tttttaacaaactg 16693696



 Score =  109 bits (55), Expect = 1e-20
 Identities = 91/103 (88%)
 Strand = Plus / Minus

                                                                            
Query: 296      cctggttttatcttaaatttgacgacatttggttgcctcactgatataaattttatcgga 355
                |||||||||||||| |||||||| |||||||| ||| |||||||||| |||||||| |||
Sbjct: 16694272 cctggttttatcttgaatttgacaacatttggctgcttcactgatatgaattttattgga 16694213

                                                           
Query: 356      tgctctgtgcaatgcctatgccgatcaatcgctgaaatcagct 398
                |||||||| || || |  |||| ||||||||||||||||||||
Sbjct: 16694212 tgctctgtacagtgtcagtgcctatcaatcgctgaaatcagct 16694170
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>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1109A06
          Length = 171438

 Score =  190 bits (96), Expect = 4e-45
 Identities = 129/140 (92%)
 Strand = Plus / Minus

                                                                          
Query: 160    ctatctcctgaaatgtatattgacaacagttggctgcatatatgtctgctgaatcgacag 219
              ||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||
Sbjct: 124618 ctatctcctgaaatgtaaattgacaacagttggctgcatatatgtctgctgaatagaaag 124559

                                                                          
Query: 220    tgcaagcgggaaatatgggtgaaacaagaaggaagagattctttttgctcggctgtcgga 279
              ||| || |||||| |||||||||||||||||||||| ||||||||||| | |||||| ||
Sbjct: 124558 tgcgagagggaaaaatgggtgaaacaagaaggaagaaattctttttgccctgctgtcaga 124499

                                  
Query: 280    agcaccagaatctgaccctg 299
              ||||||||||||||| ||||
Sbjct: 124498 agcaccagaatctgaacctg 124479



 Score =  161 bits (81), Expect = 4e-36
 Identities = 146/168 (86%)
 Strand = Plus / Minus

                                                                          
Query: 493    ctgtgatgagctgcttgctttatttttaatggtgcggagttgatcaagagcatgaacact 552
              |||||| ||||||||||||||||||||||| || || |||||||| |||||||||||| |
Sbjct: 123010 ctgtgaggagctgcttgctttatttttaattgtccgaagttgatcgagagcatgaacatt 122951

                                                                          
Query: 553    attggaatgtgatgagataaatttctcatgcaaagaattttgaggatttgcatggaaatg 612
              |||||||||||| |||||||| ||  ||||| | |||||||| |||||||  || |||||
Sbjct: 122950 attggaatgtgacgagataaaatttccatgcgatgaattttgtggatttgtgtgaaaatg 122891

                                                              
Query: 613    atcataataatgttcaaacaatgaatatagctnctccgaagaattctg 660
               |||||| ||| ||||||||||||||| || | |||||||||||||||
Sbjct: 122890 gtcataaaaatattcaaacaatgaatagagttcctccgaagaattctg 122843



 Score =  115 bits (58), Expect = 2e-22
 Identities = 70/74 (94%)
 Strand = Plus / Minus

                                                                          
Query: 422    aggtcaaagtatggtgaaggactttgtgattggcaagtgtaaggcaatgacgccatcatc 481
              |||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||
Sbjct: 123718 aggtcaaagtatggtgaaggactttgtgattgacaagtgtaaggtagtgacgccatcatc 123659

                            
Query: 482    tttttcacaaactg 495
              ||||| ||||||||
Sbjct: 123658 tttttaacaaactg 123645



 Score =  109 bits (55), Expect = 1e-20
 Identities = 91/103 (88%)
 Strand = Plus / Minus

                                                                          
Query: 296    cctggttttatcttaaatttgacgacatttggttgcctcactgatataaattttatcgga 355
              |||||||||||||| |||||||| |||||||| ||| |||||||||| |||||||| |||
Sbjct: 124221 cctggttttatcttgaatttgacaacatttggctgcttcactgatatgaattttattgga 124162

                                                         
Query: 356    tgctctgtgcaatgcctatgccgatcaatcgctgaaatcagct 398
              |||||||| || || |  |||| ||||||||||||||||||||
Sbjct: 124161 tgctctgtacagtgtcagtgcctatcaatcgctgaaatcagct 124119
to top
>dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0436E04
          Length = 144644

 Score =  190 bits (96), Expect = 4e-45
 Identities = 129/140 (92%)
 Strand = Plus / Plus

                                                                         
Query: 160   ctatctcctgaaatgtatattgacaacagttggctgcatatatgtctgctgaatcgacag 219
             ||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||
Sbjct: 89641 ctatctcctgaaatgtaaattgacaacagttggctgcatatatgtctgctgaatagaaag 89700

                                                                         
Query: 220   tgcaagcgggaaatatgggtgaaacaagaaggaagagattctttttgctcggctgtcgga 279
             ||| || |||||| |||||||||||||||||||||| ||||||||||| | |||||| ||
Sbjct: 89701 tgcgagagggaaaaatgggtgaaacaagaaggaagatattctttttgccctgctgtcaga 89760

                                 
Query: 280   agcaccagaatctgaccctg 299
             ||||||||||||||| ||||
Sbjct: 89761 agcaccagaatctgaacctg 89780



 Score =  153 bits (77), Expect = 9e-34
 Identities = 145/168 (86%)
 Strand = Plus / Plus

                                                                         
Query: 493   ctgtgatgagctgcttgctttatttttaatggtgcggagttgatcaagagcatgaacact 552
             |||||| | |||| |||||||||||||||| || || |||||||| |||||||||||| |
Sbjct: 91287 ctgtgaggtgctgtttgctttatttttaattgtccgaagttgatcgagagcatgaacatt 91346

                                                                         
Query: 553   attggaatgtgatgagataaatttctcatgcaaagaattttgaggatttgcatggaaatg 612
             |||||||||||| |||||||| ||  ||||| | |||||||| |||||||  || |||||
Sbjct: 91347 attggaatgtgacgagataaaatttccatgcgatgaattttgtggatttgtgtgaaaatg 91406

                                                             
Query: 613   atcataataatgttcaaacaatgaatatagctnctccgaagaattctg 660
              |||||| ||| ||||||||||||||| |||| |||||||||||||||
Sbjct: 91407 gtcataaaaatattcaaacaatgaatagagctcctccgaagaattctg 91454



 Score =  125 bits (63), Expect = 2e-25
 Identities = 90/99 (90%)
 Strand = Plus / Plus

                                                                         
Query: 397   cttctcatcataacgaaaaatcgacaggtcaaagtatggtgaaggactttgtgattggca 456
             |||||||||||| ||||| |  || |||||||||||||| ||||||||||||||||| ||
Sbjct: 90531 cttctcatcataccgaaacaatgataggtcaaagtatggcgaaggactttgtgattgaca 90590

                                                    
Query: 457   agtgtaaggcaatgacgccatcatctttttcacaaactg 495
             ||||||||| | |||||||||||||||||||||||||||
Sbjct: 90591 agtgtaaggtagtgacgccatcatctttttcacaaactg 90629



 Score =  125 bits (63), Expect = 2e-25
 Identities = 93/103 (90%)
 Strand = Plus / Plus

                                                                         
Query: 296   cctggttttatcttaaatttgacgacatttggttgcctcactgatataaattttatcgga 355
             |||||||||||||| |||||||| |||||||| ||  ||||||||||||||||||| |||
Sbjct: 90038 cctggttttatcttgaatttgacaacatttggctgtttcactgatataaattttattgga 90097

                                                        
Query: 356   tgctctgtgcaatgcctatgccgatcaatcgctgaaatcagct 398
             |||||||| || || || |||||||||||||||||||||||||
Sbjct: 90098 tgctctgtacagtgtctgtgccgatcaatcgctgaaatcagct 90140
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>dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0005A05
          Length = 190834

 Score =  153 bits (77), Expect = 9e-34
 Identities = 145/168 (86%)
 Strand = Plus / Plus

                                                                        
Query: 493  ctgtgatgagctgcttgctttatttttaatggtgcggagttgatcaagagcatgaacact 552
            |||||| | |||| |||||||||||||||| || || |||||||| |||||||||||| |
Sbjct: 1455 ctgtgaggtgctgtttgctttatttttaattgtccgaagttgatcgagagcatgaacatt 1514

                                                                        
Query: 553  attggaatgtgatgagataaatttctcatgcaaagaattttgaggatttgcatggaaatg 612
            |||||||||||| |||||||| ||  ||||| | |||||||| |||||||  || |||||
Sbjct: 1515 attggaatgtgacgagataaaatttccatgcgatgaattttgtggatttgtgtgaaaatg 1574

                                                            
Query: 613  atcataataatgttcaaacaatgaatatagctnctccgaagaattctg 660
             |||||| ||| ||||||||||||||| |||| |||||||||||||||
Sbjct: 1575 gtcataaaaatattcaaacaatgaatagagctcctccgaagaattctg 1622



 Score =  125 bits (63), Expect = 2e-25
 Identities = 90/99 (90%)
 Strand = Plus / Plus

                                                                       
Query: 397 cttctcatcataacgaaaaatcgacaggtcaaagtatggtgaaggactttgtgattggca 456
           |||||||||||| ||||| |  || |||||||||||||| ||||||||||||||||| ||
Sbjct: 699 cttctcatcataccgaaacaatgataggtcaaagtatggcgaaggactttgtgattgaca 758

                                                  
Query: 457 agtgtaaggcaatgacgccatcatctttttcacaaactg 495
           ||||||||| | |||||||||||||||||||||||||||
Sbjct: 759 agtgtaaggtagtgacgccatcatctttttcacaaactg 797



 Score =  125 bits (63), Expect = 2e-25
 Identities = 93/103 (90%)
 Strand = Plus / Plus

                                                                       
Query: 296 cctggttttatcttaaatttgacgacatttggttgcctcactgatataaattttatcgga 355
           |||||||||||||| |||||||| |||||||| ||  ||||||||||||||||||| |||
Sbjct: 206 cctggttttatcttgaatttgacaacatttggctgtttcactgatataaattttattgga 265

                                                      
Query: 356 tgctctgtgcaatgcctatgccgatcaatcgctgaaatcagct 398
           |||||||| || || || |||||||||||||||||||||||||
Sbjct: 266 tgctctgtacagtgtctgtgccgatcaatcgctgaaatcagct 308
to top
>gb|AY111781.1| Zea mays CL39869_1 mRNA sequence
          Length = 628

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 52/55 (94%)
 Strand = Plus / Plus

                                                                  
Query: 160 ctatctcctgaaatgtatattgacaacagttggctgcatatatgtctgctgaatc 214
           ||||||||||||||| || ||||||||||||||||||||||| ||||||||||||
Sbjct: 574 ctatctcctgaaatggatgttgacaacagttggctgcatataagtctgctgaatc 628
to top
>gb|AC147234.3| Mus musculus BAC clone RP24-500F11 from chromosome 18, complete sequence
          Length = 189846

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                        
Query: 288    aatctgaccctggttttatcttaaat 313
              ||||||||||||||||||||||||||
Sbjct: 137240 aatctgaccctggttttatcttaaat 137215
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>emb|AL672074.19| Mouse DNA sequence from clone RP23-404I18 on chromosome X, complete
             sequence
          Length = 171593

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 60    cttctttttctcctatatagtaa 82
             |||||||||||||||||||||||
Sbjct: 26403 cttctttttctcctatatagtaa 26425
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>gb|AY241132.1| Capsicum annuum deetiolated 1-like protein mRNA, partial cds
          Length = 1424

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 97/122 (79%)
 Strand = Plus / Minus

                                                                        
Query: 371  ctatgccgatcaatcgctgaaatcagcttctcatcataacgaaaaatcgacaggtcaaag 430
            ||||| || ||||| |||||||| |||||||||||| | |  || |  ||  ||||||| 
Sbjct: 1112 ctatggcggtcaatagctgaaataagcttctcatcaaacctgaagagagattggtcaaaa 1053

                                                                        
Query: 431  tatggtgaaggactttgtgattggcaagtgtaaggcaatgacgccatcatctttttcaca 490
            ||||| ||||||||||| || || ||| |  ||||||| || ||||||||||| || |||
Sbjct: 1052 tatggggaaggactttgagactgacaactaaaaggcaaggaagccatcatcttcttaaca 993

              
Query: 491  aa 492
            ||
Sbjct: 992  aa 991
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>gb|AC105459.1| Homo sapiens BAC clone RP11-115D14 from 7, complete sequence
          Length = 146098

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 598   atttgcatggaaatgatcataataa 622
             ||||||||||||||||| |||||||
Sbjct: 24621 atttgcatggaaatgataataataa 24645
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>emb|BX511008.19| Zebrafish DNA sequence from clone DKEY-109I21 in linkage group 10,
             complete sequence
          Length = 83904

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 549   cactattggaatgtgatgaga 569
             |||||||||||||||||||||
Sbjct: 68229 cactattggaatgtgatgaga 68249
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>emb|BX890572.9| Zebrafish DNA sequence from clone CH211-234F20 in linkage group 4
             Contains the gene for a novel protein containing two notch
             (DSL) domains and an EF hand domain, the gene for a novel
             protein similar to vertebrate myosin binding protein H
             (MYBPH), the gene for a novel protein sinilar to human and
             mouse CWF19-like 1, cell cycle control (S. pombe)
             (CWF19L1), the gene for a novel protein (zgc:55718), the
             gene for a novel protein containing Kelch motifs and a
             BTB/POZ domain, the sycp3 gene for synaptonemal complex
             protein 3, a novel gene and a CpG island, complete
             sequence
          Length = 166208

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 435   gtgaaggactttgtgattggc 455
             |||||||||||||||||||||
Sbjct: 54718 gtgaaggactttgtgattggc 54698
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>emb|CR388147.13| Zebrafish DNA sequence from clone DKEYP-72E1 in linkage group 3,
             complete sequence
          Length = 194517

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 333   tcactgatataaattttatcg 353
             |||||||||||||||||||||
Sbjct: 31773 tcactgatataaattttatcg 31793
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>emb|BX511155.25| Zebrafish DNA sequence from clone DKEY-56D18 in linkage group 19,
              complete sequence
          Length = 205235

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 167    ctgaaatgtatattgacaacagttg 191
              ||||||| |||||||||||||||||
Sbjct: 151208 ctgaaatatatattgacaacagttg 151232
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>gb|AC166286.14| Medicago truncatula clone mth2-173c1, complete sequence
          Length = 114609

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 563   gatgagataaatttctcatgcaaag 587
             |||||||||||| ||||||||||||
Sbjct: 39467 gatgagataaatatctcatgcaaag 39491
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>gb|AC146058.2| Pan troglodytes BAC clone RP43-92A10 from chromosome 7, complete sequence
          Length = 165469

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 598    atttgcatggaaatgatcataataa 622
              ||||||||||||||||| |||||||
Sbjct: 114083 atttgcatggaaatgataataataa 114059
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>gb|AF292105.1|AF292105 Sus scrofa uteroferrin (ACP5) gene, complete cds
          Length = 7939

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 46   ggcagcaaaaaccacttcttt 66
            |||||||||||||||||||||
Sbjct: 6719 ggcagcaaaaaccacttcttt 6699
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>gb|AC148867.3| Monodelphis domestica clone VMRC6-379O2, complete sequence
          Length = 162030

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 56    accacttctttttctcctata 76
             |||||||||||||||||||||
Sbjct: 23923 accacttctttttctcctata 23943
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>gb|AC147975.3| Pan troglodytes BAC clone CH251-510J15 from chromosome 7, complete
              sequence
          Length = 258316

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 598    atttgcatggaaatgatcataataa 622
              ||||||||||||||||| |||||||
Sbjct: 130103 atttgcatggaaatgataataataa 130127
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>emb|CR545478.6| Zebrafish DNA sequence from clone DKEY-124A17 in linkage group 10,
             complete sequence
          Length = 67405

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 549   cactattggaatgtgatgaga 569
             |||||||||||||||||||||
Sbjct: 53911 cactattggaatgtgatgaga 53931
to top
>gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold
          Length = 1833844

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 56     accacttctttttctcctata 76
              |||||||||||||||||||||
Sbjct: 479884 accacttctttttctcctata 479904
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>ref|XM_631773.1| Dictyostelium discoideum PFAS (DDB0230086), partial mRNA
          Length = 4068

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 584 aaagaattttgaggatttgc 603
           ||||||||||||||||||||
Sbjct: 809 aaagaattttgaggatttgc 790
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>gb|AC114003.4| Mus musculus chromosome 18 clone RP23-174C24, complete sequence
          Length = 223724

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 494    tgtgatgagctgcttgcttt 513
              ||||||||||||||||||||
Sbjct: 191813 tgtgatgagctgcttgcttt 191832
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>ref|XM_456894.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0A13431g)
           partial mRNA
          Length = 1926

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 555 tggaatgtgatgagataaat 574
           ||||||||||||||||||||
Sbjct: 325 tggaatgtgatgagataaat 306
to top
>gb|AC101652.8| Mus musculus chromosome 1, clone RP23-58D20, complete sequence
          Length = 168183

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 246   agaaggaagagattcttttt 265
             ||||||||||||||||||||
Sbjct: 40142 agaaggaagagattcttttt 40161
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>gb|AC108401.19| Mus musculus chromosome 12, clone RP24-98A23, complete sequence
          Length = 213381

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 189   ttggctgcatatatgtctgc 208
             ||||||||||||||||||||
Sbjct: 77738 ttggctgcatatatgtctgc 77757
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>emb|BX950181.11| Zebrafish DNA sequence from clone DKEY-28O19 in linkage group 10,
             complete sequence
          Length = 118366

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 550   actattggaatgtgatgaga 569
             ||||||||||||||||||||
Sbjct: 68308 actattggaatgtgatgaga 68327
to top
>emb|AL929325.7| Human DNA sequence from clone CTD-2194M22 on chromosome X, complete
             sequence
          Length = 176541

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 188   gttggctgcatatatgtctg 207
             ||||||||||||||||||||
Sbjct: 74216 gttggctgcatatatgtctg 74235
to top
>emb|AL513205.8| Human DNA sequence from clone RP11-432E18 on chromosome 1 Contains the
              OR6K1P olfactory receptor, family 6, subfamily K, member 1
              pseudogene, the OR6K2 gene for olfactory receptor, family
              6, subfamily K, member 2, the OR6K3 gene for olfactory
              receptor, family 6, subfamily K, member 3, the OR6K4P
              olfactory receptor, family 6, subfamily K, member 4
              pseudogene, the OR6K5P olfactory receptor, family 6,
              subfamily K, member 5 pseudogene, the OR6K6 gene for
              olfactory receptor, family 6, subfamily K, member 6, the
              OR6N1 gene for olfactory receptor, family 6, subfamily N,
              member 1, the OR6N2 gene for olfactory receptor, family 6,
              subfamily N, member 2, the OR2AQ1P olfactory receptor,
              family 2, subfamily AQ, member 1 pseudogene, the OR10AA1P
              olfactory receptor, family 10, subfamily AA, member 1
              pseudogene and the MNDA gene for myeloid cell nuclear
              differentiation antigen, complete sequence
          Length = 180999

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 586    agaattttgaggatttgcat 605
              ||||||||||||||||||||
Sbjct: 163955 agaattttgaggatttgcat 163974
to top
>emb|AL359894.9| Human DNA sequence from clone RP11-379C1 on chromosome 1 Contains the
             5' end of gene KIAA1365 and a CpG island, complete
             sequence
          Length = 161040

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    ttctttttctcctatatagt 80
             ||||||||||||||||||||
Sbjct: 55622 ttctttttctcctatatagt 55641
to top
>emb|AL356737.9| Human DNA sequence from clone RP11-118A1 on chromosome 13 Contains 2
             novel genes, complete sequence
          Length = 120269

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 187   agttggctgcatatatgtct 206
             ||||||||||||||||||||
Sbjct: 71250 agttggctgcatatatgtct 71269
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>emb|AL354775.12| Human DNA sequence from clone RP11-223F20 on chromosome 13 Contains a
             novel heterogeneous nuclear ribonucleoprotein family A
             protein and a novel gene, complete sequence
          Length = 168897

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 507   ttgctttatttttaatggtg 526
             ||||||||||||||||||||
Sbjct: 77581 ttgctttatttttaatggtg 77600
to top
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 571    aaatttctcatgcaaagaattttg 594
              |||||||| |||||||||||||||
Sbjct: 238185 aaatttcttatgcaaagaattttg 238162
to top
>gb|AC079944.17| Homo sapiens 3 BAC RP11-435F17 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 126295

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 501   agctgcttgctttattttta 520
             ||||||||||||||||||||
Sbjct: 90297 agctgcttgctttattttta 90316
to top
>emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS767 of Debaryomyces
               hansenii
          Length = 1249565

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 555     tggaatgtgatgagataaat 574
               ||||||||||||||||||||
Sbjct: 1088876 tggaatgtgatgagataaat 1088857
to top
>emb|CR318584.8| Zebrafish DNA sequence from clone CH211-123F21 in linkage group 13,
             complete sequence
          Length = 138029

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   atctcctgaaatgtatattg 181
             ||||||||||||||||||||
Sbjct: 23968 atctcctgaaatgtatattg 23949
to top
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 571    aaatttctcatgcaaagaattttg 594
              |||||||| |||||||||||||||
Sbjct: 238185 aaatttcttatgcaaagaattttg 238162
to top
>gb|AC012602.4| Homo sapiens chromosome 5 clone CTC-328N13, complete sequence
          Length = 90963

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    aaaaaccacttctttttctc 71
             ||||||||||||||||||||
Sbjct: 44492 aaaaaccacttctttttctc 44511
to top
>emb|BX255965.12| Zebrafish DNA sequence from clone CH211-270C19, complete sequence
          Length = 148298

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 618   aataatgttcaaacaatgaa 637
             ||||||||||||||||||||
Sbjct: 82198 aataatgttcaaacaatgaa 82179
to top
>gb|AC090021.21| Homo sapiens 12 BAC RP11-569H7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 55295

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 605   tggaaatgatcataataatg 624
             ||||||||||||||||||||
Sbjct: 30213 tggaaatgatcataataatg 30194
to top
>gb|AC007365.3| Homo sapiens BAC clone RP11-451M22 from 2, complete sequence
          Length = 184285

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 499    tgagctgcttgctttatttt 518
              ||||||||||||||||||||
Sbjct: 118213 tgagctgcttgctttatttt 118232
to top
>gb|AY092414.2| Solanum tuberosum deetiolated 1-like protein mRNA, complete cds
          Length = 1855

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 371  ctatgccgatcaatcgctgaaatcagcttctcatca 406
            ||||| || ||||| |||||||| ||||||||||||
Sbjct: 1361 ctatgtcggtcaatagctgaaataagcttctcatca 1326
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>gb|AC109182.14| Mus musculus chromosome 7, clone RP23-223O9, complete sequence
          Length = 191479

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 319    gacatttggttgcctcactg 338
              ||||||||||||||||||||
Sbjct: 148953 gacatttggttgcctcactg 148934
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>gb|AC008970.4|AC008970 Homo sapiens chromosome 5 clone CTD-2374C24, complete sequence
          Length = 119119

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    aaaaaccacttctttttctc 71
             ||||||||||||||||||||
Sbjct: 32550 aaaaaccacttctttttctc 32569
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>gb|AC006160.9|AC006160 Homo sapiens chromosome 4 clone C0481P14 map 4p16, complete sequence
          Length = 179310

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 481    ctttttcacaaactgtgatgagct 504
              |||||||||| |||||||||||||
Sbjct: 119182 ctttttcacacactgtgatgagct 119159
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>dbj|AP001822.4| Homo sapiens genomic DNA, chromosome 11q clone:CTD-2336M4, complete
             sequence
          Length = 134278

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 229   gaaatatgggtgaaacaagaaggaagag 256
             ||||||| ||||||||||||||| ||||
Sbjct: 92962 gaaatataggtgaaacaagaaggcagag 92989
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>gb|AC134445.3| Mus musculus BAC clone RP24-170M15 from 6, complete sequence
          Length = 165568

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 103   actacatatgaccaaaatttctat 126
             ||||||||||||||||||| ||||
Sbjct: 16383 actacatatgaccaaaattactat 16406
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>gb|AC133599.3| Mus musculus BAC clone RP24-390N10 from 6, complete sequence
          Length = 185830

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 103   actacatatgaccaaaatttctat 126
             ||||||||||||||||||| ||||
Sbjct: 15289 actacatatgaccaaaattactat 15266
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>gb|AC132082.3| Mus musculus BAC clone RP24-511K23 from 1, complete sequence
          Length = 165033

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 246    agaaggaagagattcttttt 265
              ||||||||||||||||||||
Sbjct: 146894 agaaggaagagattcttttt 146875
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>gb|U70214.1|ECU70214 Escherichia coli chromosome minutes 4-6
          Length = 123171

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 571   aaatttctcatgcaaagaattttg 594
             |||||||| |||||||||||||||
Sbjct: 69260 aaatttcttatgcaaagaattttg 69237
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>emb|AL591373.8| Mouse DNA sequence from clone RP23-268M6 on chromosome 18, complete
             sequence
          Length = 174264

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 494   tgtgatgagctgcttgcttt 513
             ||||||||||||||||||||
Sbjct: 89908 tgtgatgagctgcttgcttt 89889
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>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 571    aaatttctcatgcaaagaattttg 594
              |||||||| |||||||||||||||
Sbjct: 254625 aaatttcttatgcaaagaattttg 254602
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>gb|AC166354.3| Mus musculus BAC clone RP24-283P23 from chromosome 1, complete sequence
          Length = 158355

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 246   agaaggaagagattcttttt 265
             ||||||||||||||||||||
Sbjct: 65742 agaaggaagagattcttttt 65723
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>dbj|AP002534.1| Homo sapiens genomic DNA, chromosome 1q22-q23, CD1 region, section 3/4
          Length = 300000

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 586   agaattttgaggatttgcat 605
             ||||||||||||||||||||
Sbjct: 83061 agaattttgaggatttgcat 83080
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>dbj|AB045361.1| Homo sapiens genomic DNA, chromosome 1q22-q23, clone:713i11, complete
              sequence
          Length = 148081

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 586    agaattttgaggatttgcat 605
              ||||||||||||||||||||
Sbjct: 130164 agaattttgaggatttgcat 130183


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,408,657
Number of Sequences: 3902068
Number of extensions: 7408657
Number of successful extensions: 172335
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 171947
Number of HSP's gapped (non-prelim): 388
length of query: 664
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 641
effective length of database: 17,143,297,704
effective search space: 10988853828264
effective search space used: 10988853828264
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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