ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags30l06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_493874.1| Oryza sativa (japonica cultivar-group), predic... 248 1e-62
2dbj|AK104101.1| Oryza sativa (japonica cultivar-group) cDNA clon... 248 1e-62
3dbj|AK065749.1| Oryza sativa (japonica cultivar-group) cDNA clon... 248 1e-62
4dbj|AK061764.1| Oryza sativa (japonica cultivar-group) cDNA clon... 248 1e-62
5gb|AY108730.1| Zea mays PCO062079 mRNA sequence 180 2e-42
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 149 8e-33
7gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome... 149 8e-33
8gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome... 149 8e-33
9gb|BT019051.1| Zea mays clone Contig572.F mRNA sequence 113 5e-22
10gb|AY109125.1| Zea mays PCO100749 mRNA sequence 113 5e-22
11ref|XM_549823.1| Oryza sativa (japonica cultivar-group), mRNA 96 1e-16
12dbj|AK108287.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 1e-16
13gb|BT014454.1| Lycopersicon esculentum clone 133801F, mRNA sequence 84 4e-13
14ref|NM_120567.1| Arabidopsis thaliana unknown protein AT5G04850 ... 68 2e-08
15gb|AY142614.1| Arabidopsis thaliana unknown protein (At5g04850) ... 68 2e-08
16gb|AF370241.1| Arabidopsis thaliana unknown protein (At5g04850) ... 68 2e-08
17emb|BX832584.1|CNS0A12C Arabidopsis thaliana Full-length cDNA Co... 68 2e-08
18emb|BX832277.1|CNS0A11H Arabidopsis thaliana Full-length cDNA Co... 68 2e-08
19gb|AY088616.1| Arabidopsis thaliana clone 8440 mRNA, complete se... 68 2e-08
20dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
21dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
22dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
23dbj|AP002969.2| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
24ref|NM_111900.3| Arabidopsis thaliana unknown protein AT3G10640 ... 52 0.001
25ref|NM_202544.1| Arabidopsis thaliana unknown protein AT3G10640 ... 52 0.001
26emb|BX823662.1|CNS0A6IH Arabidopsis thaliana Full-length cDNA Co... 52 0.001
27gb|BT005859.1| Arabidopsis thaliana At3g10640 gene, complete cds 52 0.001
28dbj|AB008271.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 52 0.001
29ref|XM_690626.1| PREDICTED: Danio rerio similar to immunoglobuli... 42 1.4
30ref|XM_364506.1| Magnaporthe grisea 70-15 predicted protein (MG0... 40 5.6
31ref|XM_747329.1| Aspergillus fumigatus Af293 hypothetical protei... 40 5.6
32gb|AC091623.2| Sus scrofa clone RP44-183E24, complete sequence 40 5.6
33gb|DQ153192.1| Sus scrofa CKM gene, promoter region and complete... 40 5.6
34gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome 40 5.6
35gb|AC090983.13| Homo sapiens chromosome 15, clone RP11-385H1, co... 40 5.6
36emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 5.6
37gb|M24219.1|HSERPT Rabbit gammaherpesvirus gene repeat motifs, c... 40 5.6
38emb|AL714012.19| Mouse DNA sequence from clone RP23-238N3 on chr... 40 5.6 
>ref|XM_493874.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 798

 Score =  248 bits (125), Expect = 1e-62
 Identities = 221/253 (87%)
 Strand = Plus / Minus

                                                                       
Query: 163 ggcacagtaggcagtcccatttcatcctcctgctgccggttcgccgggactgctgcatga 222
           ||||| || |||| ||||| ||| ||||||||||||||||| |  ||| | | ||  |||
Sbjct: 776 ggcactgtcggcaatcccaattcgtcctcctgctgccggtttggtggggcgggtgtgtga 717

                                                                       
Query: 223 ccacttggtgcagcaggtaagttaagctcagaatcaagatcagtctccttgtctggttgg 282
           ||  ||||||||||||| ||||||||||||||||| ||||| |  ||||| |||||||| 
Sbjct: 716 cccgttggtgcagcaggcaagttaagctcagaatctagatctgattccttatctggttga 657

                                                                       
Query: 283 aggtacgatgggactgaattcgattcaaagtccatatcggcttccaaagcatcaagctcg 342
           |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| 
Sbjct: 656 aggtacgaggggactgaatttgattcaaagtccatgtcggcttccaaagcatcaagctcc 597

                                                                       
Query: 343 cccataagttcctcctcgtcgatgtcatctgggacattgtagcttctaccaagagtttct 402
           ||||||||||| |||||||| |||||||| ||||||||||||||||| || |||||||| 
Sbjct: 596 cccataagttcttcctcgtcaatgtcatcagggacattgtagcttcttccgagagtttcc 537

                        
Query: 403 tgtatttcattgc 415
           |||||||||||||
Sbjct: 536 tgtatttcattgc 524
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>dbj|AK104101.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-H05, full
           insert sequence
          Length = 1005

 Score =  248 bits (125), Expect = 1e-62
 Identities = 221/253 (87%)
 Strand = Plus / Minus

                                                                       
Query: 163 ggcacagtaggcagtcccatttcatcctcctgctgccggttcgccgggactgctgcatga 222
           ||||| || |||| ||||| ||| ||||||||||||||||| |  ||| | | ||  |||
Sbjct: 766 ggcactgtcggcaatcccaattcgtcctcctgctgccggtttggtggggcgggtgtgtga 707

                                                                       
Query: 223 ccacttggtgcagcaggtaagttaagctcagaatcaagatcagtctccttgtctggttgg 282
           ||  ||||||||||||| ||||||||||||||||| ||||| |  ||||| |||||||| 
Sbjct: 706 cccgttggtgcagcaggcaagttaagctcagaatctagatctgattccttatctggttga 647

                                                                       
Query: 283 aggtacgatgggactgaattcgattcaaagtccatatcggcttccaaagcatcaagctcg 342
           |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| 
Sbjct: 646 aggtacgaggggactgaatttgattcaaagtccatgtcggcttccaaagcatcaagctcc 587

                                                                       
Query: 343 cccataagttcctcctcgtcgatgtcatctgggacattgtagcttctaccaagagtttct 402
           ||||||||||| |||||||| |||||||| ||||||||||||||||| || |||||||| 
Sbjct: 586 cccataagttcttcctcgtcaatgtcatcagggacattgtagcttcttccgagagtttcc 527

                        
Query: 403 tgtatttcattgc 415
           |||||||||||||
Sbjct: 526 tgtatttcattgc 514
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>dbj|AK065749.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013042C01, full
           insert sequence
          Length = 1112

 Score =  248 bits (125), Expect = 1e-62
 Identities = 221/253 (87%)
 Strand = Plus / Minus

                                                                       
Query: 163 ggcacagtaggcagtcccatttcatcctcctgctgccggttcgccgggactgctgcatga 222
           ||||| || |||| ||||| ||| ||||||||||||||||| |  ||| | | ||  |||
Sbjct: 858 ggcactgtcggcaatcccaattcgtcctcctgctgccggtttggtggggcgggtgtgtga 799

                                                                       
Query: 223 ccacttggtgcagcaggtaagttaagctcagaatcaagatcagtctccttgtctggttgg 282
           ||  ||||||||||||| ||||||||||||||||| ||||| |  ||||| |||||||| 
Sbjct: 798 cccgttggtgcagcaggcaagttaagctcagaatctagatctgattccttatctggttga 739

                                                                       
Query: 283 aggtacgatgggactgaattcgattcaaagtccatatcggcttccaaagcatcaagctcg 342
           |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| 
Sbjct: 738 aggtacgaggggactgaatttgattcaaagtccatgtcggcttccaaagcatcaagctcc 679

                                                                       
Query: 343 cccataagttcctcctcgtcgatgtcatctgggacattgtagcttctaccaagagtttct 402
           ||||||||||| |||||||| |||||||| ||||||||||||||||| || |||||||| 
Sbjct: 678 cccataagttcttcctcgtcaatgtcatcagggacattgtagcttcttccgagagtttcc 619

                        
Query: 403 tgtatttcattgc 415
           |||||||||||||
Sbjct: 618 tgtatttcattgc 606
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>dbj|AK061764.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-B05, full
           insert sequence
          Length = 1005

 Score =  248 bits (125), Expect = 1e-62
 Identities = 221/253 (87%)
 Strand = Plus / Minus

                                                                       
Query: 163 ggcacagtaggcagtcccatttcatcctcctgctgccggttcgccgggactgctgcatga 222
           ||||| || |||| ||||| ||| ||||||||||||||||| |  ||| | | ||  |||
Sbjct: 766 ggcactgtcggcaatcccaattcgtcctcctgctgccggtttggtggggcgggtgtgtga 707

                                                                       
Query: 223 ccacttggtgcagcaggtaagttaagctcagaatcaagatcagtctccttgtctggttgg 282
           ||  ||||||||||||| ||||||||||||||||| ||||| |  ||||| |||||||| 
Sbjct: 706 cccgttggtgcagcaggcaagttaagctcagaatctagatctgattccttatctggttga 647

                                                                       
Query: 283 aggtacgatgggactgaattcgattcaaagtccatatcggcttccaaagcatcaagctcg 342
           |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| 
Sbjct: 646 aggtacgaggggactgaatttgattcaaagtccatgtcggcttccaaagcatcaagctcc 587

                                                                       
Query: 343 cccataagttcctcctcgtcgatgtcatctgggacattgtagcttctaccaagagtttct 402
           ||||||||||| |||||||| |||||||| ||||||||||||||||| || |||||||| 
Sbjct: 586 cccataagttcttcctcgtcaatgtcatcagggacattgtagcttcttccgagagtttcc 527

                        
Query: 403 tgtatttcattgc 415
           |||||||||||||
Sbjct: 526 tgtatttcattgc 514
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>gb|AY108730.1| Zea mays PCO062079 mRNA sequence
          Length = 1178

 Score =  180 bits (91), Expect = 2e-42
 Identities = 127/139 (91%)
 Strand = Plus / Minus

                                                                       
Query: 273 gtctggttggaggtacgatgggactgaattcgattcaaagtccatatcggcttccaaagc 332
           ||||||||||||||| ||||||||||| |  ||||| |||||||| ||||||||||||||
Sbjct: 764 gtctggttggaggtaagatgggactgactctgattcgaagtccatgtcggcttccaaagc 705

                                                                       
Query: 333 atcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagcttctacc 392
           ||| ||||| ||||||||||| ||||| ||||||||||||||||| ||||||||||| ||
Sbjct: 704 atcgagctcccccataagttcttcctcatcgatgtcatctgggacgttgtagcttctgcc 645

                              
Query: 393 aagagtttcttgtatttca 411
           |||||||||||||||||||
Sbjct: 644 aagagtttcttgtatttca 626



 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 86/99 (86%)
 Strand = Plus / Minus

                                                                       
Query: 145 gtacgaattgacgcgtgcggcacagtaggcagtcccatttcatcctcctgctgccggttc 204
           |||||||| || || || ||||| ||||||| ||| |  ||||||||||||||| |||| 
Sbjct: 880 gtacgaatggatgcttgtggcactgtaggcaatcctagctcatcctcctgctgctggttt 821

                                                  
Query: 205 gccgggactgctgcatgaccacttggtgcagcaggtaag 243
           ||||||||||||||||| ||| |||||||||||||||||
Sbjct: 820 gccgggactgctgcatggccagttggtgcagcaggtaag 782
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score =  149 bits (75), Expect = 8e-33
 Identities = 105/115 (91%)
 Strand = Plus / Minus

                                                                          
Query: 227    ttggtgcagcaggtaagttaagctcagaatcaagatcagtctccttgtctggttggaggt 286
              ||||||||||||| ||||||||||||||||| ||||| |  ||||| |||||||| ||||
Sbjct: 145292 ttggtgcagcaggcaagttaagctcagaatctagatctgattccttatctggttgaaggt 145233

                                                                     
Query: 287    acgatgggactgaattcgattcaaagtccatatcggcttccaaagcatcaagctc 341
              |||| ||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 145232 acgaggggactgaatttgattcaaagtccatgtcggcttccaaagcatcaagctc 145178



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 67/73 (91%)
 Strand = Plus / Minus

                                                                          
Query: 343    cccataagttcctcctcgtcgatgtcatctgggacattgtagcttctaccaagagtttct 402
              ||||||||||| |||||||| |||||||| ||||||||||||||||| || |||||||| 
Sbjct: 144784 cccataagttcttcctcgtcaatgtcatcagggacattgtagcttcttccgagagtttcc 144725

                           
Query: 403    tgtatttcattgc 415
              |||||||||||||
Sbjct: 144724 tgtatttcattgc 144712
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>gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668H12,
             complete sequence
          Length = 160603

 Score =  149 bits (75), Expect = 8e-33
 Identities = 105/115 (91%)
 Strand = Plus / Minus

                                                                         
Query: 227   ttggtgcagcaggtaagttaagctcagaatcaagatcagtctccttgtctggttggaggt 286
             ||||||||||||| ||||||||||||||||| ||||| |  ||||| |||||||| ||||
Sbjct: 27476 ttggtgcagcaggcaagttaagctcagaatctagatctgattccttatctggttgaaggt 27417

                                                                    
Query: 287   acgatgggactgaattcgattcaaagtccatatcggcttccaaagcatcaagctc 341
             |||| ||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 27416 acgaggggactgaatttgattcaaagtccatgtcggcttccaaagcatcaagctc 27362



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 67/73 (91%)
 Strand = Plus / Minus

                                                                         
Query: 343   cccataagttcctcctcgtcgatgtcatctgggacattgtagcttctaccaagagtttct 402
             ||||||||||| |||||||| |||||||| ||||||||||||||||| || |||||||| 
Sbjct: 26968 cccataagttcttcctcgtcaatgtcatcagggacattgtagcttcttccgagagtttcc 26909

                          
Query: 403   tgtatttcattgc 415
             |||||||||||||
Sbjct: 26908 tgtatttcattgc 26896
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>gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0036D10,
              complete sequence
          Length = 156772

 Score =  149 bits (75), Expect = 8e-33
 Identities = 105/115 (91%)
 Strand = Plus / Minus

                                                                          
Query: 227    ttggtgcagcaggtaagttaagctcagaatcaagatcagtctccttgtctggttggaggt 286
              ||||||||||||| ||||||||||||||||| ||||| |  ||||| |||||||| ||||
Sbjct: 145292 ttggtgcagcaggcaagttaagctcagaatctagatctgattccttatctggttgaaggt 145233

                                                                     
Query: 287    acgatgggactgaattcgattcaaagtccatatcggcttccaaagcatcaagctc 341
              |||| ||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 145232 acgaggggactgaatttgattcaaagtccatgtcggcttccaaagcatcaagctc 145178



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 67/73 (91%)
 Strand = Plus / Minus

                                                                          
Query: 343    cccataagttcctcctcgtcgatgtcatctgggacattgtagcttctaccaagagtttct 402
              ||||||||||| |||||||| |||||||| ||||||||||||||||| || |||||||| 
Sbjct: 144784 cccataagttcttcctcgtcaatgtcatcagggacattgtagcttcttccgagagtttcc 144725

                           
Query: 403    tgtatttcattgc 415
              |||||||||||||
Sbjct: 144724 tgtatttcattgc 144712
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>gb|BT019051.1| Zea mays clone Contig572.F mRNA sequence
          Length = 910

 Score =  113 bits (57), Expect = 5e-22
 Identities = 96/109 (88%)
 Strand = Plus / Minus

                                                                       
Query: 307 tcaaagtccatatcggcttccaaagcatcaagctcgcccataagttcctcctcgtcgatg 366
           ||||| |||||||| |  ||||||||||| ||||||||||| ||||| |||||||| | |
Sbjct: 619 tcaaattccatatcagactccaaagcatctagctcgcccatcagttcttcctcgtcaacg 560

                                                            
Query: 367 tcatctgggacattgtagcttctaccaagagtttcttgtatttcattgc 415
           ||||| ||||  ||||||||||||||||||||||||||||| |||||||
Sbjct: 559 tcatcagggatgttgtagcttctaccaagagtttcttgtatctcattgc 511



 Score = 46.1 bits (23), Expect = 0.090
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 225 acttggtgcagcaggtaagttaagctcagaatcaa 259
           ||||||||||||||||||||| || |||| |||||
Sbjct: 695 acttggtgcagcaggtaagttgaggtcagcatcaa 661
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>gb|AY109125.1| Zea mays PCO100749 mRNA sequence
          Length = 978

 Score =  113 bits (57), Expect = 5e-22
 Identities = 96/109 (88%)
 Strand = Plus / Minus

                                                                       
Query: 307 tcaaagtccatatcggcttccaaagcatcaagctcgcccataagttcctcctcgtcgatg 366
           ||||| |||||||| |  ||||||||||| ||||||||||| ||||| |||||||| | |
Sbjct: 638 tcaaattccatatcagactccaaagcatctagctcgcccatcagttcttcctcgtcaacg 579

                                                            
Query: 367 tcatctgggacattgtagcttctaccaagagtttcttgtatttcattgc 415
           ||||| ||||  ||||||||||||||||||||||||||||| |||||||
Sbjct: 578 tcatcagggatgttgtagcttctaccaagagtttcttgtatctcattgc 530



 Score = 46.1 bits (23), Expect = 0.090
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 225 acttggtgcagcaggtaagttaagctcagaatcaa 259
           ||||||||||||||||||||| || |||| |||||
Sbjct: 714 acttggtgcagcaggtaagttgaggtcagcatcaa 680
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>ref|XM_549823.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1018

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 123/148 (83%)
 Strand = Plus / Minus

                                                                       
Query: 268 tccttgtctggttggaggtacgatgggactgaattcgattcaaagtccatatcggcttcc 327
           |||||||||||||| || ||||||||||||| | | || ||||| |||||||| || |||
Sbjct: 644 tccttgtctggttgaagatacgatgggactgcacttgactcaaactccatatcagcctcc 585

                                                                       
Query: 328 aaagcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagctt 387
           |||||||| || || ||||| ||||| ||||| || |  || || ||||  |||||||||
Sbjct: 584 aaagcatccagttctcccattagttcttcctcatcaacatcgtcagggatgttgtagctt 525

                                       
Query: 388 ctaccaagagtttcttgtatttcattgc 415
           |||||||| | |||||||||||| ||||
Sbjct: 524 ctaccaagggattcttgtatttcgttgc 497
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>dbj|AK108287.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-D09, full
           insert sequence
          Length = 1018

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 123/148 (83%)
 Strand = Plus / Minus

                                                                       
Query: 268 tccttgtctggttggaggtacgatgggactgaattcgattcaaagtccatatcggcttcc 327
           |||||||||||||| || ||||||||||||| | | || ||||| |||||||| || |||
Sbjct: 644 tccttgtctggttgaagatacgatgggactgcacttgactcaaactccatatcagcctcc 585

                                                                       
Query: 328 aaagcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagctt 387
           |||||||| || || ||||| ||||| ||||| || |  || || ||||  |||||||||
Sbjct: 584 aaagcatccagttctcccattagttcttcctcatcaacatcgtcagggatgttgtagctt 525

                                       
Query: 388 ctaccaagagtttcttgtatttcattgc 415
           |||||||| | |||||||||||| ||||
Sbjct: 524 ctaccaagggattcttgtatttcgttgc 497
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>gb|BT014454.1| Lycopersicon esculentum clone 133801F, mRNA sequence
          Length = 1008

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 93/110 (84%)
 Strand = Plus / Minus

                                                                       
Query: 306 ttcaaagtccatatcggcttccaaagcatcaagctcgcccataagttcctcctcgtcgat 365
           |||||| ||||| || ||||||| |||||||||||||||||| || || || || || | 
Sbjct: 633 ttcaaactccatgtccgcttccagagcatcaagctcgcccatgagctcttcttcatcaac 574

                                                             
Query: 366 gtcatctgggacattgtagcttctaccaagagtttcttgtatttcattgc 415
           |||||| || |||  |||||||||||||||||| ||||| ||||||||||
Sbjct: 573 gtcatcaggcacaccgtagcttctaccaagagtctcttgaatttcattgc 524
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>ref|NM_120567.1| Arabidopsis thaliana unknown protein AT5G04850 mRNA, complete cds
          Length = 978

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 70/82 (85%)
 Strand = Plus / Minus

                                                                       
Query: 330 agcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagcttct 389
           |||||||||||||||||  || || || ||||| |||||||| || ||||||||||| ||
Sbjct: 596 agcatcaagctcgcccaggaggtcatcttcgtcaatgtcatcaggaacattgtagctcct 537

                                 
Query: 390 accaagagtttcttgtatttca 411
           |||||| || ||||| ||||||
Sbjct: 536 accaagtgtctcttgaatttca 515
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>gb|AY142614.1| Arabidopsis thaliana unknown protein (At5g04850) mRNA, complete cds
          Length = 739

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 70/82 (85%)
 Strand = Plus / Minus

                                                                       
Query: 330 agcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagcttct 389
           |||||||||||||||||  || || || ||||| |||||||| || ||||||||||| ||
Sbjct: 510 agcatcaagctcgcccaggaggtcatcttcgtcaatgtcatcaggaacattgtagctcct 451

                                 
Query: 390 accaagagtttcttgtatttca 411
           |||||| || ||||| ||||||
Sbjct: 450 accaagtgtctcttgaatttca 429
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>gb|AF370241.1| Arabidopsis thaliana unknown protein (At5g04850) mRNA, complete cds
          Length = 963

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 70/82 (85%)
 Strand = Plus / Minus

                                                                       
Query: 330 agcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagcttct 389
           |||||||||||||||||  || || || ||||| |||||||| || ||||||||||| ||
Sbjct: 573 agcatcaagctcgcccaggaggtcatcttcgtcaatgtcatcaggaacattgtagctcct 514

                                 
Query: 390 accaagagtttcttgtatttca 411
           |||||| || ||||| ||||||
Sbjct: 513 accaagtgtctcttgaatttca 492
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>emb|BX832584.1|CNS0A12C Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH82ZC12 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 933

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 70/82 (85%)
 Strand = Plus / Minus

                                                                       
Query: 330 agcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagcttct 389
           |||||||||||||||||  || || || ||||| |||||||| || ||||||||||| ||
Sbjct: 569 agcatcaagctcgcccaggaggtcatcttcgtcaatgtcatcaggaacattgtagctcct 510

                                 
Query: 390 accaagagtttcttgtatttca 411
           |||||| || ||||| ||||||
Sbjct: 509 accaagtgtctcttgaatttca 488
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>emb|BX832277.1|CNS0A11H Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH62ZF10 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 922

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 70/82 (85%)
 Strand = Plus / Minus

                                                                       
Query: 330 agcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagcttct 389
           |||||||||||||||||  || || || ||||| |||||||| || ||||||||||| ||
Sbjct: 581 agcatcaagctcgcccaggaggtcatcttcgtcaatgtcatcaggaacattgtagctcct 522

                                 
Query: 390 accaagagtttcttgtatttca 411
           |||||| || ||||| ||||||
Sbjct: 521 accaagtgtctcttgaatttca 500
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>gb|AY088616.1| Arabidopsis thaliana clone 8440 mRNA, complete sequence
          Length = 978

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 70/82 (85%)
 Strand = Plus / Minus

                                                                       
Query: 330 agcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagcttct 389
           |||||||||||||||||  || || || ||||| |||||||| || ||||||||||| ||
Sbjct: 596 agcatcaagctcgcccaggaggtcatcttcgtcaatgtcatcaggaacattgtagctcct 537

                                 
Query: 390 accaagagtttcttgtatttca 411
           |||||| || ||||| ||||||
Sbjct: 536 accaagtgtctcttgaatttca 515
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              complete sequence
          Length = 43261740

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                          
Query: 268    tccttgtctggttggaggtacgatgggactgaattcgattcaaagtccatatcggcttcc 327
              |||||||||||||| || ||||||||||||| | | || ||||| |||||||| || |||
Sbjct: 170482 tccttgtctggttgaagatacgatgggactgcacttgactcaaactccatatcagcctcc 170541

                      
Query: 328    aaagcatc 335
              ||||||||
Sbjct: 170542 aaagcatc 170549



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                   
Query: 379    ttgtagcttctaccaagagtttcttgtatttcattgc 415
              ||||||||||||||||| | |||||||||||| ||||
Sbjct: 170802 ttgtagcttctaccaagggattcttgtatttcgttgc 170838
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>dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0672D08
          Length = 173729

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                          
Query: 268    tccttgtctggttggaggtacgatgggactgaattcgattcaaagtccatatcggcttcc 327
              |||||||||||||| || ||||||||||||| | | || ||||| |||||||| || |||
Sbjct: 168284 tccttgtctggttgaagatacgatgggactgcacttgactcaaactccatatcagcctcc 168343

                      
Query: 328    aaagcatc 335
              ||||||||
Sbjct: 168344 aaagcatc 168351



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                   
Query: 379    ttgtagcttctaccaagagtttcttgtatttcattgc 415
              ||||||||||||||||| | |||||||||||| ||||
Sbjct: 168604 ttgtagcttctaccaagggattcttgtatttcgttgc 168640
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>dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0436E04
          Length = 144644

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                         
Query: 268   tccttgtctggttggaggtacgatgggactgaattcgattcaaagtccatatcggcttcc 327
             |||||||||||||| || ||||||||||||| | | || ||||| |||||||| || |||
Sbjct: 12152 tccttgtctggttgaagatacgatgggactgcacttgactcaaactccatatcagcctcc 12211

                     
Query: 328   aaagcatc 335
             ||||||||
Sbjct: 12212 aaagcatc 12219



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 379   ttgtagcttctaccaagagtttcttgtatttcattgc 415
             ||||||||||||||||| | |||||||||||| ||||
Sbjct: 12472 ttgtagcttctaccaagggattcttgtatttcgttgc 12508
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>dbj|AP002969.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0455C04
          Length = 147940

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                          
Query: 268    tccttgtctggttggaggtacgatgggactgaattcgattcaaagtccatatcggcttcc 327
              |||||||||||||| || ||||||||||||| | | || ||||| |||||||| || |||
Sbjct: 119028 tccttgtctggttgaagatacgatgggactgcacttgactcaaactccatatcagcctcc 119087

                      
Query: 328    aaagcatc 335
              ||||||||
Sbjct: 119088 aaagcatc 119095



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                   
Query: 379    ttgtagcttctaccaagagtttcttgtatttcattgc 415
              ||||||||||||||||| | |||||||||||| ||||
Sbjct: 119348 ttgtagcttctaccaagggattcttgtatttcgttgc 119384
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>ref|NM_111900.3| Arabidopsis thaliana unknown protein AT3G10640 transcript variant
           AT3G10640.1 mRNA, complete cds
          Length = 1013

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                       
Query: 330 agcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagcttct 389
           |||||||||||| ||||| || || |||||||| | | |||| || | ||||||||| ||
Sbjct: 624 agcatcaagctctcccatgaggtcatcctcgtcaaggccatcaggaatattgtagctcct 565

                                 
Query: 390 accaagagtttcttgtatttca 411
           |||||| | |||||| ||||||
Sbjct: 564 accaagtgattcttgaatttca 543
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>ref|NM_202544.1| Arabidopsis thaliana unknown protein AT3G10640 transcript variant
           AT3G10640.2 mRNA, complete cds
          Length = 1266

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                       
Query: 330 agcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagcttct 389
           |||||||||||| ||||| || || |||||||| | | |||| || | ||||||||| ||
Sbjct: 877 agcatcaagctctcccatgaggtcatcctcgtcaaggccatcaggaatattgtagctcct 818

                                 
Query: 390 accaagagtttcttgtatttca 411
           |||||| | |||||| ||||||
Sbjct: 817 accaagtgattcttgaatttca 796
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>emb|BX823662.1|CNS0A6IH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS63ZE07 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1206

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                       
Query: 330 agcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagcttct 389
           |||||||||||| ||||| || || |||||||| | | |||| || | ||||||||| ||
Sbjct: 876 agcatcaagctctcccatgaggtcatcctcgtcaaggccatcaggaatattgtagctcct 817

                                 
Query: 390 accaagagtttcttgtatttca 411
           |||||| | |||||| ||||||
Sbjct: 816 accaagtgattcttgaatttca 795
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>gb|BT005859.1| Arabidopsis thaliana At3g10640 gene, complete cds
          Length = 708

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                       
Query: 330 agcatcaagctcgcccataagttcctcctcgtcgatgtcatctgggacattgtagcttct 389
           |||||||||||| ||||| || || |||||||| | | |||| || | ||||||||| ||
Sbjct: 510 agcatcaagctctcccatgaggtcatcctcgtcaaggccatcaggaatattgtagctcct 451

                                 
Query: 390 accaagagtttcttgtatttca 411
           |||||| | |||||| ||||||
Sbjct: 450 accaagtgattcttgaatttca 429
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>dbj|AB008271.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUK11
          Length = 79073

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                   
Query: 358   tcgtcgatgtcatctgggacattgtagcttctaccaagagtttcttgtatttca 411
             ||||| |||||||| || ||||||||||| |||||||| || ||||| ||||||
Sbjct: 56364 tcgtcaatgtcatcaggaacattgtagctcctaccaagtgtctcttgaatttca 56417
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>ref|XM_690626.1| PREDICTED: Danio rerio similar to immunoglobulin superfamily, member
            9 (LOC567334), mRNA
          Length = 3618

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 210  gactgctgcatgaccacttggtgca 234
            |||||||||||||||||||| ||||
Sbjct: 2708 gactgctgcatgaccacttgctgca 2684
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>ref|XM_364506.1| Magnaporthe grisea 70-15 predicted protein (MG09420.4) partial mRNA
          Length = 903

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 390 accaagagtttcttgtattt 409
           ||||||||||||||||||||
Sbjct: 262 accaagagtttcttgtattt 243
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>ref|XM_747329.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g10560)
           partial mRNA
          Length = 1389

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 250 tcagaatcaagatcagtctc 269
           ||||||||||||||||||||
Sbjct: 487 tcagaatcaagatcagtctc 468
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>gb|AC091623.2| Sus scrofa clone RP44-183E24, complete sequence
          Length = 200062

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 108   gatcaaacctacaccatagc 127
             ||||||||||||||||||||
Sbjct: 34462 gatcaaacctacaccatagc 34443
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>gb|DQ153192.1| Sus scrofa CKM gene, promoter region and complete cds
          Length = 12338

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 180  catttcatcctcctgctgcc 199
            ||||||||||||||||||||
Sbjct: 3018 catttcatcctcctgctgcc 3037
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>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome
          Length = 3665893

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   tttcatcctcctgctgccgg 201
             ||||||||||||||||||||
Sbjct: 18006 tttcatcctcctgctgccgg 17987
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>gb|AC090983.13| Homo sapiens chromosome 15, clone RP11-385H1, complete sequence
          Length = 203244

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 363    gatgtcatctgggacattgt 382
              ||||||||||||||||||||
Sbjct: 136131 gatgtcatctgggacattgt 136150
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 211     actgctgcatgaccacttggtgca 234
               |||||||||||||| |||||||||
Sbjct: 2675456 actgctgcatgaccccttggtgca 2675479
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>gb|M24219.1|HSERPT Rabbit gammaherpesvirus gene repeat motifs, complete cds
          Length = 925

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 200 ggttcgccgggactgctgca 219
           ||||||||||||||||||||
Sbjct: 675 ggttcgccgggactgctgca 694
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>emb|AL714012.19| Mouse DNA sequence from clone RP23-238N3 on chromosome X, complete
             sequence
          Length = 120361

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 174   cagtcccatttcatcctcct 193
             ||||||||||||||||||||
Sbjct: 44067 cagtcccatttcatcctcct 44048


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,424,800
Number of Sequences: 3902068
Number of extensions: 3424800
Number of successful extensions: 60982
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60851
Number of HSP's gapped (non-prelim): 129
length of query: 415
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 393
effective length of database: 17,147,199,772
effective search space: 6738849510396
effective search space used: 6738849510396
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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