ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags30k22 |
|---|---|
| Clone Library Name | barley_pub |
>LPAT_MAIZE (Q41745) 1-acyl-sn-glycerol-3-phosphate acyltransferase PLS1 (EC| 2.3.1.51) (Phospholipid synthesis protein 1) Length = 374 Score = 166 bits (421), Expect = 3e-41 Identities = 78/104 (75%), Positives = 89/104 (85%) Frame = -2 Query: 581 IKRHSMSDMPNSDEDVSKWXKDIFVAKDALLDRHITTGTFXEEIIPIGRPVKSLMVVLSW 402 +KRH+MS+MP SDEDVSKW KDIFVAKDALLD+H+ TGTF EEI PIGRPVKSL+V L W Sbjct: 252 MKRHAMSEMPKSDEDVSKWCKDIFVAKDALLDKHLATGTFDEEIRPIGRPVKSLLVTLFW 311 Query: 401 SCLLLYGAHXFLQWTQLLSTWKGVILFATGLAMVTAVMHVFIMF 270 SCLLL+GA F +WTQLLSTW+GV A G+A+VT VMHVFIMF Sbjct: 312 SCLLLFGAIEFFKWTQLLSTWRGVAFTAAGMALVTGVMHVFIMF 355
>LPAT2_ARATH (Q8LG50) 1-acyl-sn-glycerol-3-phosphate acyltransferase 2 (EC| 2.3.1.51) (Lysophosphatidyl acyltransferase 2) Length = 389 Score = 116 bits (291), Expect = 4e-26 Identities = 55/103 (53%), Positives = 73/103 (70%), Gaps = 1/103 (0%) Frame = -2 Query: 581 IKRHSMSDMPNSDEDVSKWXKDIFVAKDALLDRHITTGTF-XEEIIPIGRPVKSLMVVLS 405 IK HSM D+P SD+ +++W +D FVAKDALLD+HI TF ++ IGRP+KSL VVLS Sbjct: 251 IKCHSMKDLPESDDAIAQWCRDQFVAKDALLDKHIAADTFPGQQEQNIGRPIKSLAVVLS 310 Query: 404 WSCLLLYGAHXFLQWTQLLSTWKGVILFATGLAMVTAVMHVFI 276 W+C+L GA FL W QL S+WKG+ + A GL ++T M + I Sbjct: 311 WACVLTLGAIKFLHWAQLFSSWKGITISALGLGIITLCMQILI 353
>LPAT2_BRANA (Q9XFW4) 1-acyl-sn-glycerol-3-phosphate acyltransferase 2 (EC| 2.3.1.51) (Lysophosphatidyl acyltransferase 2) Length = 390 Score = 113 bits (283), Expect = 3e-25 Identities = 53/103 (51%), Positives = 73/103 (70%), Gaps = 1/103 (0%) Frame = -2 Query: 581 IKRHSMSDMPNSDEDVSKWXKDIFVAKDALLDRHITTGTF-XEEIIPIGRPVKSLMVVLS 405 IK HSM D+P ++++++W +D FVAKDALLD+HI TF ++ IGRP+KSL VV+S Sbjct: 251 IKCHSMKDLPEPEDEIAQWCRDQFVAKDALLDKHIAADTFPGQKEQNIGRPIKSLAVVVS 310 Query: 404 WSCLLLYGAHXFLQWTQLLSTWKGVILFATGLAMVTAVMHVFI 276 W+CLL GA FL W+ L S+WKG+ L A GL ++T M + I Sbjct: 311 WACLLTLGAMKFLHWSNLFSSWKGIALSAFGLGIITLCMQILI 353
>LPAT2_BRAOL (Q6IWY1) 1-acyl-sn-glycerol-3-phosphate acyltransferase 2 (EC| 2.3.1.51) (Lysophosphatidyl acyltransferase 2) Length = 391 Score = 108 bits (269), Expect = 1e-23 Identities = 52/103 (50%), Positives = 72/103 (69%), Gaps = 1/103 (0%) Frame = -2 Query: 581 IKRHSMSDMPNSDEDVSKWXKDIFVAKDALLDRHITTGTF-XEEIIPIGRPVKSLMVVLS 405 IK HSM D+P S++++++W +D FVAKDALLD+HI TF ++ I RP+KSL VV+S Sbjct: 252 IKCHSMKDLPESEDEIAQWCRDQFVAKDALLDKHIAADTFPGQKEQNIDRPIKSLAVVVS 311 Query: 404 WSCLLLYGAHXFLQWTQLLSTWKGVILFATGLAMVTAVMHVFI 276 W+CLL GA FL W+ L S+ KG+ L A GL ++T M + I Sbjct: 312 WACLLTLGAMKFLHWSNLFSSLKGIALSALGLGIITLCMQILI 354
>LPAT3_ARATH (Q9SYC8) 1-acyl-sn-glycerol-3-phosphate acyltransferase 3 (EC| 2.3.1.51) (Lysophosphatidyl acyltransferase 3) Length = 376 Score = 90.5 bits (223), Expect = 3e-18 Identities = 37/103 (35%), Positives = 67/103 (65%), Gaps = 1/103 (0%) Frame = -2 Query: 581 IKRHSMSDMPNSDEDVSKWXKDIFVAKDALLDRHITTGTFXE-EIIPIGRPVKSLMVVLS 405 ++RH MS++P +D+ +++W +D+F+ KDA L+++ T F + E+ I RP+K L+VV+ Sbjct: 252 MRRHKMSELPETDDGIAQWCQDLFITKDAQLEKYFTKDVFSDLEVHQINRPIKPLIVVII 311 Query: 404 WSCLLLYGAHXFLQWTQLLSTWKGVILFATGLAMVTAVMHVFI 276 W L++G LQW ++++WK ++LF L + T M + I Sbjct: 312 WLGFLVFGGFKLLQWLSIVASWKIILLFVFFLVIATITMQILI 354
>PLCD_HUMAN (Q9NRZ5) 1-acyl-sn-glycerol-3-phosphate acyltransferase delta (EC| 2.3.1.51) (1-AGP acyltransferase 4) (1-AGPAT 4) (Lysophosphatidic acid acyltransferase-delta) (LPAAT-delta) (1-acylglycerol-3-phosphate O-acyltransferase 4) Length = 378 Score = 45.8 bits (107), Expect = 9e-05 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%) Frame = -2 Query: 581 IKRHSMSDMPNSDEDVSKWXKDIFVAKDALLDRHITTGTFXE-EIIPIGRPVKSLMVVLS 405 ++R + D+P D++ S W ++ KDA + + TGTF E ++P RP +L+ L Sbjct: 255 VRRIPLEDIPEDDDECSAWLHKLYQEKDAFQEEYYRTGTFPETPMVPPRRP-WTLVNWLF 313 Query: 404 WSCLLLYGAHXFL 366 W+ L+LY FL Sbjct: 314 WASLVLYPFFQFL 326
>PLCD_RAT (Q924S1) 1-acyl-sn-glycerol-3-phosphate acyltransferase delta (EC| 2.3.1.51) (1-AGP acyltransferase 4) (1-AGPAT 4) (Lysophosphatidic acid acyltransferase-delta) (LPAAT-delta) (1-acylglycerol-3-phosphate O-acyltransferase 4) Length = 378 Score = 45.1 bits (105), Expect = 2e-04 Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 1/101 (0%) Frame = -2 Query: 581 IKRHSMSDMPNSDEDVSKWXKDIFVAKDALLDRHITTGTFXE-EIIPIGRPVKSLMVVLS 405 ++R M D+P ++ S W ++ KDA + + TG F E +P RP SL+ L Sbjct: 255 VRRIPMEDIPEDEDKCSAWLHKLYQEKDAFQEEYYRTGVFPETPWVPPRRP-WSLVNWLF 313 Query: 404 WSCLLLYGAHXFLQWTQLLSTWKGVILFATGLAMVTAVMHV 282 W+ LLLY FL ++S+ V L + L A M V Sbjct: 314 WASLLLYPFFQFL--VSMVSSGSSVTLASLVLIFCMASMGV 352
>PLCD_MOUSE (Q8K4X7) 1-acyl-sn-glycerol-3-phosphate acyltransferase delta (EC| 2.3.1.51) (1-AGP acyltransferase 4) (1-AGPAT 4) (Lysophosphatidic acid acyltransferase-delta) (LPAAT-delta) (1-acylglycerol-3-phosphate O-acyltransferase 4) Length = 378 Score = 45.1 bits (105), Expect = 2e-04 Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 1/101 (0%) Frame = -2 Query: 581 IKRHSMSDMPNSDEDVSKWXKDIFVAKDALLDRHITTGTFXE-EIIPIGRPVKSLMVVLS 405 ++R M D+P ++ S W ++ KDA + + TG F E +P RP SL+ L Sbjct: 255 VRRIPMEDIPEDEDKCSAWLHKLYQEKDAFQEEYYRTGVFPETPWVPPRRP-WSLVNWLF 313 Query: 404 WSCLLLYGAHXFLQWTQLLSTWKGVILFATGLAMVTAVMHV 282 W+ LLLY FL ++S+ V L + L A M V Sbjct: 314 WASLLLYPFFQFL--VSMVSSGSSVTLASLVLIFCMASMGV 352
>PLCC_PONPY (Q5RA57) 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma (EC| 2.3.1.51) (1-AGP acyltransferase 3) (1-AGPAT 3) (Lysophosphatidic acid acyltransferase-gamma) (LPAAT-gamma) (1-acylglycerol-3-phosphate O-acyltransferase 3) Length = 376 Score = 38.1 bits (87), Expect = 0.019 Identities = 19/72 (26%), Positives = 37/72 (51%) Frame = -2 Query: 581 IKRHSMSDMPNSDEDVSKWXKDIFVAKDALLDRHITTGTFXEEIIPIGRPVKSLMVVLSW 402 ++R + D+P +++ ++W ++ KDAL + + G F E R +L+ LSW Sbjct: 255 VRRFPLEDIPLDEKEAAQWLHKLYQEKDALQEIYNQKGMFPGEQFKPARRPWTLLNFLSW 314 Query: 401 SCLLLYGAHXFL 366 + +LL F+ Sbjct: 315 ATILLSPLFSFV 326
>PLCC_HUMAN (Q9NRZ7) 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma (EC| 2.3.1.51) (1-AGP acyltransferase 3) (1-AGPAT 3) (Lysophosphatidic acid acyltransferase-gamma) (LPAAT-gamma) (1-acylglycerol-3-phosphate O-acyltransferase 3) Length = 376 Score = 38.1 bits (87), Expect = 0.019 Identities = 19/72 (26%), Positives = 37/72 (51%) Frame = -2 Query: 581 IKRHSMSDMPNSDEDVSKWXKDIFVAKDALLDRHITTGTFXEEIIPIGRPVKSLMVVLSW 402 ++R + D+P +++ ++W ++ KDAL + + G F E R +L+ LSW Sbjct: 255 VRRFPLEDIPLDEKEAAQWLHKLYQEKDALQEIYNQKGMFPGEQFKPARRPWTLLNFLSW 314 Query: 401 SCLLLYGAHXFL 366 + +LL F+ Sbjct: 315 ATILLSPLFSFV 326
>PLCC_MOUSE (Q9D517) 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma (EC| 2.3.1.51) (1-AGP acyltransferase 3) (1-AGPAT 3) (Lysophosphatidic acid acyltransferase-gamma) (LPAAT-gamma) (1-acylglycerol-3-phosphate O-acyltransferase 3) Length = 376 Score = 36.2 bits (82), Expect = 0.070 Identities = 18/72 (25%), Positives = 34/72 (47%) Frame = -2 Query: 581 IKRHSMSDMPNSDEDVSKWXKDIFVAKDALLDRHITTGTFXEEIIPIGRPVKSLMVVLSW 402 ++R + D+P + ++W ++ KDAL + + G F E R +L+ L W Sbjct: 255 VRRFPLEDIPADETSAAQWLHKLYQEKDALQEMYKQKGVFPGEQFKPARRPWTLLNFLCW 314 Query: 401 SCLLLYGAHXFL 366 + +LL F+ Sbjct: 315 ATILLSPLFSFV 326
>YB42_YEAST (P38226) Hypothetical 45.5 kDa protein in FAT1-TCM62 intergenic| region Length = 397 Score = 35.0 bits (79), Expect = 0.16 Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Frame = -2 Query: 581 IKRHSMSDMPNSDE-DVSKWXKDIFVAKDALLDRHITTGTFXEE 453 I+ + D+P DE + S+W I+ KDAL++R+ +TG+F + Sbjct: 313 IRAFDVKDIPLEDENEFSEWLYKIWSEKDALMERYYSTGSFVSD 356
>PALI1_KLULA (Q6CXZ7) pH-response regulator palI/RIM9 homolog 1| Length = 220 Score = 33.5 bits (75), Expect = 0.46 Identities = 18/42 (42%), Positives = 27/42 (64%) Frame = -2 Query: 422 LMVVLSWSCLLLYGAHXFLQWTQLLSTWKGVILFATGLAMVT 297 L+ VLS+ C+L++ L + L+T K V+LFA G +MVT Sbjct: 91 LVHVLSFVCVLVFWLFAILICIKWLNTSKSVLLFAVGWSMVT 132
>LGAT1_MOUSE (Q91YX5) Acyl-CoA:lysophosphatidylglycerol acyltransferase 1 (EC| 2.3.1.-) Length = 370 Score = 29.3 bits (64), Expect = 8.6 Identities = 12/35 (34%), Positives = 18/35 (51%) Frame = -2 Query: 566 MSDMPNSDEDVSKWXKDIFVAKDALLDRHITTGTF 462 + D+P ED++ W F+ K+ LL TG F Sbjct: 289 IGDVPLETEDLTSWLYQRFIEKEDLLSHFYKTGAF 323 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 79,512,294 Number of Sequences: 219361 Number of extensions: 1523914 Number of successful extensions: 2965 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 2897 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2961 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4986986160 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
