ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags30k08 |
|---|---|
| Clone Library Name | barley_pub |
>FACE1_HUMAN (O75844) CAAX prenyl protease 1 homolog (EC 3.4.24.84) (Prenyl| protein-specific endoprotease 1) (Farnesylated proteins-converting enzyme 1) (FACE-1) (Zinc metalloproteinase Ste24 homolog) Length = 475 Score = 119 bits (299), Expect = 6e-27 Identities = 64/132 (48%), Positives = 88/132 (66%), Gaps = 2/132 (1%) Frame = -2 Query: 660 KLNHTAYSFVAVQLLTFMQFGGYTLVRNSKDLFESFGFED-QPVIIGL-IIFMHTIIPIQ 487 KL HT + + Q+ +F+ F + ++ K+LF +FGF D QP +IGL IIF P Sbjct: 341 KLGHTVKNIIISQMNSFLCFFLFAVLIGRKELFAAFGFYDSQPTLIGLLIIFQFIFSPYN 400 Query: 486 HLLSFCLNLVSRAFEFQADAFAKNLGYAPELRGALVKLQEENLSAMNTDPWYSAYHYSHP 307 +LSFCL ++SR FEFQADAFAK LG A +L AL+KL ++NL +D +S +HYSHP Sbjct: 401 EVLSFCLTVLSRRFEFQADAFAKKLGKAKDLYSALIKLNKDNLGFPVSDWLFSMWHYSHP 460 Query: 306 PLVERLSALEDL 271 PL+ERL AL+ + Sbjct: 461 PLLERLQALKTM 472
>FACE1_MOUSE (Q80W54) CAAX prenyl protease 1 homolog (EC 3.4.24.84) (Prenyl| protein-specific endoprotease 1) (Farnesylated proteins-converting enzyme 1) (FACE-1) (Zinc metalloproteinase Ste24 homolog) Length = 475 Score = 119 bits (297), Expect = 1e-26 Identities = 63/131 (48%), Positives = 88/131 (67%), Gaps = 2/131 (1%) Frame = -2 Query: 660 KLNHTAYSFVAVQLLTFMQFGGYTLVRNSKDLFESFGFED-QPVIIGL-IIFMHTIIPIQ 487 KL HT + + Q+ +F+ F + ++ ++LF +FGF D QP +IGL IIF P Sbjct: 341 KLGHTVKNIIISQMNSFLCFFLFAVLIGRRELFAAFGFYDSQPTLIGLLIIFQFIFSPYN 400 Query: 486 HLLSFCLNLVSRAFEFQADAFAKNLGYAPELRGALVKLQEENLSAMNTDPWYSAYHYSHP 307 +LSFCL ++SR FEFQADAFAK LG A +L AL+KL ++NL +D +S +HYSHP Sbjct: 401 EVLSFCLTVLSRRFEFQADAFAKKLGKAKDLYSALIKLNKDNLGFPVSDWLFSTWHYSHP 460 Query: 306 PLVERLSALED 274 PL+ERL AL++ Sbjct: 461 PLLERLQALKN 471
>STE24_YEAST (P47154) CAAX prenyl protease 1 (EC 3.4.24.84) (Prenyl| protein-specific endoprotease 1) (PPSEP 1) (A-factor-converting enzyme) Length = 453 Score = 115 bits (288), Expect = 1e-25 Identities = 59/149 (39%), Positives = 88/149 (59%), Gaps = 15/149 (10%) Frame = -2 Query: 654 NHTAYSFVAVQLLTFMQFGGYTLVRNSKDLFESFGF---------------EDQPVIIGL 520 NH + QL TF+ F +T + + + +FGF ++ P+IIG Sbjct: 305 NHIVNMVIFSQLHTFLIFSLFTSIYRNTSFYNTFGFFLEKSTGSFVDPVITKEFPIIIGF 364 Query: 519 IIFMHTIIPIQHLLSFCLNLVSRAFEFQADAFAKNLGYAPELRGALVKLQEENLSAMNTD 340 ++F + P++ + F ++L+SR E+QADA+AK LGY L AL+ LQ +NLS MN D Sbjct: 365 MLFNDLLTPLECAMQFVMSLISRTHEYQADAYAKKLGYKQNLCRALIDLQIKNLSTMNVD 424 Query: 339 PWYSAYHYSHPPLVERLSALEDLDSKKED 253 P YS+YHYSHP L ERL+AL+ + KK++ Sbjct: 425 PLYSSYHYSHPTLAERLTALDYVSEKKKN 453
>STE24_SCHPO (Q10071) Probable CAAX prenyl protease 1 (EC 3.4.24.84) (Prenyl| protein-specific endoprotease 1) (PPSEP 1) Length = 474 Score = 99.4 bits (246), Expect = 9e-21 Identities = 49/112 (43%), Positives = 78/112 (69%), Gaps = 1/112 (0%) Frame = -2 Query: 585 VRNSKDLFESFGF-EDQPVIIGLIIFMHTIIPIQHLLSFCLNLVSRAFEFQADAFAKNLG 409 +RN+ L+ SF F ++PVI+GL++F + P+ +L+F N VSR E+QADAFAK LG Sbjct: 364 IRNNS-LYTSFNFITEKPVIVGLLLFSDALGPLSSILTFASNKVSRLCEYQADAFAKQLG 422 Query: 408 YAPELRGALVKLQEENLSAMNTDPWYSAYHYSHPPLVERLSALEDLDSKKED 253 YA +L L+++ ++NLS + D Y++Y++SHP LV+RL+A++ KK + Sbjct: 423 YAKDLGDGLIRIHDDNLSPLEFDSLYTSYYHSHPILVDRLNAIDYTTLKKNN 474
>HTPX_PASMU (P57846) Probable protease htpX homolog (EC 3.4.24.-)| Length = 286 Score = 34.3 bits (77), Expect = 0.34 Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 15/101 (14%) Frame = -2 Query: 516 IFMHTIIPIQHLLSFCLNLV----SRAFEFQADAFAKNLGYAPELRGALVKLQ------- 370 I+ + ++ L F +++ SR EF+ADA + L ++ AL +LQ Sbjct: 186 IYFLVSMVLEILFGFLASMIAMWFSRYREFRADAGSAKLVGKHKMIAALQRLQRLHEPQE 245 Query: 369 -EENLSAMNTDP---WYSAYHYSHPPLVERLSALEDLDSKK 259 E L+A + +A SHPPL +R++AL+ LDS K Sbjct: 246 LEGQLAAFAINGKRGGLAALFMSHPPLEKRIAALQQLDSFK 286
>HTPX_STRR6 (Q8DPH5) Probable protease htpX homolog (EC 3.4.24.-)| Length = 299 Score = 31.6 bits (70), Expect = 2.2 Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 15/119 (12%) Frame = -2 Query: 582 RNSKDLFESFGFEDQPVIIGLIIFMHTIIPIQHLLSFCLNLVSRAFEFQADAFAKNLGYA 403 R S D + G E II L++ + I+ + +SR EF ADA + L Sbjct: 185 RRSDDDRDGNGLE----IIMLVVSLLAIVLAPLAATLVQLAISRQREFLADASSVELTRN 240 Query: 402 PE-LRGALVKLQEENLSAMNTDPWYSAYH--------------YSHPPLVERLSALEDL 271 P+ + AL KL + + D SA + Y+HPP+ ER+ L+ + Sbjct: 241 PQGMINALDKLDNSKPMSRHVDDASSALYINDPKKGGGFQKLFYTHPPISERIERLKQM 299
>HTPX_STRPN (Q97QD6) Probable protease htpX homolog (EC 3.4.24.-)| Length = 299 Score = 31.6 bits (70), Expect = 2.2 Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 15/119 (12%) Frame = -2 Query: 582 RNSKDLFESFGFEDQPVIIGLIIFMHTIIPIQHLLSFCLNLVSRAFEFQADAFAKNLGYA 403 R S D + G E II L++ + I+ + +SR EF ADA + L Sbjct: 185 RRSDDDRDGNGLE----IIMLVVSLLAIVLAPLAATLVQLAISRQREFLADASSVELTRN 240 Query: 402 PE-LRGALVKLQEENLSAMNTDPWYSAYH--------------YSHPPLVERLSALEDL 271 P+ + AL KL + + D SA + Y+HPP+ ER+ L+ + Sbjct: 241 PQGMINALDKLDNSKPMSRHVDDASSALYINDPKKGGGFQKLFYTHPPISERIERLKQM 299
>HTPX2_STRCO (Q9F2V2) Probable protease htpX homolog 2 (EC 3.4.24.-)| Length = 287 Score = 31.2 bits (69), Expect = 2.9 Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 21/118 (17%) Frame = -2 Query: 546 EDQPVIIGLIIFMHTIIPIQHLLSFCLNL-VSRAFEFQADAFAKNLGYAP-ELRGALVKL 373 +D P ++G+++ M + L + + L +SR+ E++ADA L P L GAL KL Sbjct: 174 DDGPGLLGMLLIML----LGPLAATVIQLAISRSREYEADASGAQLTGDPLALAGALRKL 229 Query: 372 Q--------------EENLSAMNTDPW-----YSAYHYSHPPLVERLSALEDLDSKKE 256 + E M +P+ S +HPP+ ER++ LE + +++ Sbjct: 230 ELGTKQLPLPPEPRLETASHMMIANPFRPGQGISKMFSTHPPMAERIARLEKMAGRQQ 287
>HTPX_STRMU (Q93D93) Probable protease htpX homolog (EC 3.4.24.-)| Length = 299 Score = 30.8 bits (68), Expect = 3.7 Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 16/100 (16%) Frame = -2 Query: 522 LIIFMHTIIPIQHLLSFCLNL-VSRAFEFQADAFAKNLGYAPE-LRGALVKLQEENLSAM 349 L+IF I + L + + L +SR E+ ADA + L P+ + AL KL++ A Sbjct: 200 LLIFSLLAIILAPLAASLVQLAISRQREYLADASSVELTRNPQGMIRALQKLEQSQPMAH 259 Query: 348 NTDPWYSAYH--------------YSHPPLVERLSALEDL 271 + D +A + Y+HPP+ +R+ LE + Sbjct: 260 SVDNASAALYINDPKKKSGLKHLFYTHPPIADRIRRLEQV 299
>TRI16_HUMAN (O95361) Tripartite motif protein 16 (Estrogen-responsive B box| protein) Length = 564 Score = 30.0 bits (66), Expect = 6.4 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = -2 Query: 426 FAKNLGYAPELRGALVKLQEENLSAMNTDPWYSAY 322 +A ++ + P+ ++LQEEN NT PW Y Sbjct: 371 YAYDITFDPDTAHKYLRLQEENRKVTNTTPWEHPY 405
>HTPX_PSESM (Q885Q3) Probable protease htpX homolog (EC 3.4.24.-)| Length = 295 Score = 30.0 bits (66), Expect = 6.4 Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 16/98 (16%) Frame = -2 Query: 525 GLIIFMHTI---IPIQHLLSFCLNLVSRAFEFQADAFAKNLGYAPELRGALVKLQEENLS 355 G+ ++ TI + + L S + SR EF+AD L + GAL +L+ E Sbjct: 194 GIAYYITTIFAELVLGFLASAIVMWFSRKREFRADDAGARLAGTDAMIGALQRLRSEQGV 253 Query: 354 AMNTDPWYSAY-------------HYSHPPLVERLSAL 280 +N +A+ SHPPL +R+ AL Sbjct: 254 PVNMPDSLTAFGINAGLKKGLAGLFMSHPPLEQRIEAL 291
>PQQE_ACICA (P07782) Coenzyme PQQ synthesis protein E (Pyrroloquinoline quinone| biosynthesis protein E) (Coenzyme PQQ synthesis protein III) Length = 384 Score = 29.6 bits (65), Expect = 8.3 Identities = 17/60 (28%), Positives = 29/60 (48%) Frame = -2 Query: 543 DQPVIIGLIIFMHTIIPIQHLLSFCLNLVSRAFEFQADAFAKNLGYAPELRGALVKLQEE 364 D P+++ +I H I I+ ++ CL L + E A + G+A R L+ QE+ Sbjct: 147 DYPMVLNFVIHRHNIDQIEQIIELCLELNADTVEL---AICQFYGWAFLNRQGLLPTQEQ 203 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 90,501,586 Number of Sequences: 219361 Number of extensions: 1885824 Number of successful extensions: 4430 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 4322 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4416 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6314008338 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
