>MAON_SOLTU (P37225) NAD-dependent malic enzyme 59 kDa isoform, mitochondrial|
           precursor (EC 1.1.1.39) (NAD-ME)
          Length = 601

 Score = 93.2 bits (230), Expect = 3e-19
 Identities = 44/86 (51%), Positives = 60/86 (69%)
 Frame = -1

Query: 493 AAAECLASYITDDAIRKGILFPSISSIRHITXXXXXXXXXXXVDEDLAEGCSDMDPRDLR 314
           AAAECLASY++DD I +GIL+PSI  IR IT           V EDLAEG  D+  ++L+
Sbjct: 516 AAAECLASYMSDDEINRGILYPSIDDIRDITAEVGAAVLRAAVAEDLAEGHGDVGVKELQ 575

Query: 313 SMSESDTVDYVARKMWYPVYSPLVND 236
            MS+ +T+++V + MWYPVY PLV++
Sbjct: 576 HMSKEETIEHVRQNMWYPVYGPLVHE 601

>MAOM_SOLTU (P37221) NAD-dependent malic enzyme 62 kDa isoform, mitochondrial|
           precursor (EC 1.1.1.39) (NAD-ME)
          Length = 626

 Score = 83.6 bits (205), Expect = 3e-16
 Identities = 41/87 (47%), Positives = 55/87 (63%)
 Frame = -1

Query: 493 AAAECLASYITDDAIRKGILFPSISSIRHITXXXXXXXXXXXVDEDLAEGCSDMDPRDLR 314
           AAAECLA+YIT++ + KGI++PSIS IR IT           ++EDLAEG  +MD R+LR
Sbjct: 539 AAAECLAAYITEEEVLKGIIYPSISRIRDITKEVAAAVVKEAIEEDLAEGYREMDSRELR 598

Query: 313 SMSESDTVDYVARKMWYPVYSPLVNDK 233
            + E+   ++V   MW P Y  LV  K
Sbjct: 599 KLDEAQISEFVENNMWSPDYPTLVYKK 625

>MAOM_AMAHP (P37224) NAD-dependent malic enzyme 65 kDa isoform, mitochondrial|
           precursor (EC 1.1.1.39) (NAD-ME)
          Length = 623

 Score = 79.7 bits (195), Expect = 4e-15
 Identities = 39/87 (44%), Positives = 54/87 (62%)
 Frame = -1

Query: 493 AAAECLASYITDDAIRKGILFPSISSIRHITXXXXXXXXXXXVDEDLAEGCSDMDPRDLR 314
           AAAE LA Y+TD+ +  G+++PSIS IR IT           V+EDLAEG  DMD R+L+
Sbjct: 536 AAAERLAGYMTDEEVINGVIYPSISRIRDITKEVAAAVIKEAVEEDLAEGYRDMDARELQ 595

Query: 313 SMSESDTVDYVARKMWYPVYSPLVNDK 233
            ++E   ++Y+ + MW P Y  LV  K
Sbjct: 596 KLNEEQILEYIEKNMWNPEYPTLVYKK 622

>MAOC_MAIZE (P16243) NADP-dependent malic enzyme, chloroplast precursor (EC|
           1.1.1.40) (NADP-ME)
          Length = 636

 Score = 35.8 bits (81), Expect = 0.064
 Identities = 25/80 (31%), Positives = 32/80 (40%)
 Frame = -1

Query: 493 AAAECLASYITDDAIRKGILFPSISSIRHITXXXXXXXXXXXVDEDLAEGCSDMDPRDLR 314
           AA++ LA   T D   KG +FP  +SIR I+            +  LA           R
Sbjct: 563 AASKALADQATQDNFEKGSIFPPFTSIRKISAHIAAAVAGKAYELGLA----------TR 612

Query: 313 SMSESDTVDYVARKMWYPVY 254
               SD V Y    M+ PVY
Sbjct: 613 LPPPSDLVKYAENCMYTPVY 632

>MAOX_PHAVU (P12628) NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME)|
          Length = 589

 Score = 33.5 bits (75), Expect = 0.32
 Identities = 19/65 (29%), Positives = 33/65 (50%)
 Frame = -1

Query: 493 AAAECLASYITDDAIRKGILFPSISSIRHITXXXXXXXXXXXVDEDLAEGCSDMDPRDLR 314
           AA+E LA+ ++++   KG+++P  ++IR I+            D  LA       P+DL 
Sbjct: 516 AASEALAAQVSEENYDKGLIYPPFTNIRKISANIAAKVAAKAYDLGLASHLK--RPKDLV 573

Query: 313 SMSES 299
             +ES
Sbjct: 574 KYAES 578

>MAOX_VITVI (P51615) NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME)|
          Length = 591

 Score = 33.1 bits (74), Expect = 0.42
 Identities = 22/80 (27%), Positives = 33/80 (41%)
 Frame = -1

Query: 493 AAAECLASYITDDAIRKGILFPSISSIRHITXXXXXXXXXXXVDEDLAEGCSDMDPRDLR 314
           AA+E LA  +T +   KG+++P  S+IR I+            +  LA           R
Sbjct: 518 AASEALARQVTQENFDKGLIYPPFSNIRKISAHIAANVAAKAYELGLA----------TR 567

Query: 313 SMSESDTVDYVARKMWYPVY 254
                + V Y    M+ PVY
Sbjct: 568 LPQPENLVKYAESCMYSPVY 587

>MAOX_POPTR (P34105) NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME)|
          Length = 591

 Score = 33.1 bits (74), Expect = 0.42
 Identities = 14/31 (45%), Positives = 23/31 (74%)
 Frame = -1

Query: 493 AAAECLASYITDDAIRKGILFPSISSIRHIT 401
           AAAE LA  I ++ + KG+++P +S+IR I+
Sbjct: 518 AAAEALAGQIKEEYLAKGLIYPPLSNIRKIS 548

>MAOX_MESCR (P37223) NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME)|
          Length = 585

 Score = 32.3 bits (72), Expect = 0.71
 Identities = 20/65 (30%), Positives = 29/65 (44%)
 Frame = -1

Query: 493 AAAECLASYITDDAIRKGILFPSISSIRHITXXXXXXXXXXXVDEDLAEGCSDMDPRDLR 314
           AA+E LAS +T +   KG+++P    IR I+            +  LA       P DL 
Sbjct: 512 AASEALASQVTGEHFIKGLIYPPFKDIRKISAHIAAGVAAKAYELGLASRLP--QPADLV 569

Query: 313 SMSES 299
             +ES
Sbjct: 570 KFAES 574

>DNBI_SHV21 (P24910) Major DNA-binding protein|
          Length = 1128

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -3

Query: 170 NTLLFRFSCSTWEHFSRYCCHVYWLCCCLICL 75
           N + FR +  T  H   YCC+V+W   C + L
Sbjct: 584 NNINFRETIKTVHHVLHYCCNVFWQAPCAMFL 615

>POU1_DUGJA (P31370) POU domain protein 1 (DjPOU1)|
          Length = 559

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +2

Query: 320 VPRIHVRASLGQIFINSSTGDCSADTCGDVPDT*N*RKEDSFSNC 454
           V R+ +R    QI IN     C A++ G VPDT   ++ D+ S C
Sbjct: 468 VKRLKIRKEPDQISINDENTSCRAESSGIVPDTHYRQECDNHSIC 512

>MAOM_HUMAN (P23368) NAD-dependent malic enzyme, mitochondrial precursor (EC|
           1.1.1.38) (NAD-ME) (Malic enzyme 2)
          Length = 584

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 19/85 (22%), Positives = 34/85 (40%)
 Frame = -1

Query: 490 AAECLASYITDDAIRKGILFPSISSIRHITXXXXXXXXXXXVDEDLAEGCSDMDPRDLRS 311
           AA+ L S +TD+ + +G L+P +++I+ ++               +A           R 
Sbjct: 494 AAKALTSQLTDEELAQGRLYPPLANIQEVSINIAIKVTEYLYANKMA----------FRY 543

Query: 310 MSESDTVDYVARKMWYPVYSPLVND 236
               D   YV  + W   Y  L+ D
Sbjct: 544 PEPEDKAKYVKERTWRSEYDSLLPD 568

>MAOC_FLATR (P22178) NADP-dependent malic enzyme, chloroplast precursor (EC|
           1.1.1.40) (NADP-ME)
          Length = 648

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 19/65 (29%), Positives = 30/65 (46%)
 Frame = -1

Query: 493 AAAECLASYITDDAIRKGILFPSISSIRHITXXXXXXXXXXXVDEDLAEGCSDMDPRDLR 314
           AA+E  A  +T +   KG++FP  +SIR I+            +  LA       P +L 
Sbjct: 575 AASEAPAEQVTQEHFDKGLIFPPFTSIRKISAHIAAKVAAKAYELGLASRLP--QPENLV 632

Query: 313 SMSES 299
           + +ES
Sbjct: 633 AYAES 637

>MAOM_MOUSE (Q99KE1) NAD-dependent malic enzyme, mitochondrial precursor (EC|
           1.1.1.38) (NAD-ME) (Malic enzyme 2)
          Length = 589

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 19/85 (22%), Positives = 35/85 (41%)
 Frame = -1

Query: 490 AAECLASYITDDAIRKGILFPSISSIRHITXXXXXXXXXXXVDEDLAEGCSDMDPRDLRS 311
           AA+ L + +TD  + +G L+PS+++I+ ++               +A           R 
Sbjct: 494 AAKALTTQLTDAELAQGRLYPSLANIQEVSANIAIKLAEYLYANKMA----------FRY 543

Query: 310 MSESDTVDYVARKMWYPVYSPLVND 236
               D   YV  ++W   Y  L+ D
Sbjct: 544 PEPEDKARYVRERIWRSNYVSLLPD 568

>ALG8_ARATH (O80505) Probable dolichyl pyrophosphate Glc1Man9GlcNAc2|
           alpha-1,3-glucosyltransferase (EC 2.4.1.-)
           (Dolichyl-P-Glc:Glc1Man9GlcNAc2-PP-dolichyl
           glucosyltransferase)
          Length = 383

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 20/84 (23%), Positives = 35/84 (41%)
 Frame = -2

Query: 402 PHVSALQSPVLLLMKIWPRDALTWILGTSGACQSRIRWITWLGRCGTLFTAHL*MTSSVR 223
           P ++ L +  ++L+ I P     W    SG      RW+ +   CG LF  H+   +S+ 
Sbjct: 275 PQITPLTTFAMVLLAISPCLIKAWKKPHSGLVA---RWVAYAYTCGFLFGWHVHEKASLH 331

Query: 222 RSTPEETYQAHTFVLISEYFAISV 151
            + P       +      YF +S+
Sbjct: 332 FTIPLAIVAVQSLEDAKHYFLVSI 355

>MATK_CARAN (Q9GF55) Maturase K (Intron maturase)|
          Length = 504

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -3

Query: 191 IHLF*LVNTLLFRFSCSTWEHFSRYCCHVYWLC 93
           IHL  LV TL +R   ++  HF R+C + Y+ C
Sbjct: 159 IHLEILVQTLRYRVKDASSLHFLRFCVYEYFNC 191

>K0406_MOUSE (Q91V83) Protein KIAA0406 homolog|
          Length = 1085

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -1

Query: 361 EDLAEGCSDMDPRDLRSMSESDTVDYVARKMWY 263
           ED+   C  M P +LR + +S   +Y +++ WY
Sbjct: 539 EDIHNKCPSMGPEELREIVKSILEEYTSQENWY 571

>MAVS_RAT (Q66HG9) Mitochondrial antiviral signaling protein (Interferon-beta|
           promoter stimulator protein 1) (IPS-1) (Virus-induced
           signaling adapter)
          Length = 507

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 22/68 (32%), Positives = 26/68 (38%)
 Frame = -2

Query: 447 EKESSFLQFQVSGTSPHVSALQSPVLLLMKIWPRDALTWILGTSGACQSRIRWITWLGRC 268
           E E S  + QV   SP V  L SP  L  +  P +           C S + W  WLG  
Sbjct: 437 ENEYSSFRIQVD-KSPSVDLLGSPEPLATQQSPEE--------EEPCASSVSWAKWLGAT 487

Query: 267 GTLFTAHL 244
             L  A L
Sbjct: 488 SALLAAFL 495

>MATK_CAPHA (Q5VH41) Maturase K (Intron maturase)|
          Length = 504

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -3

Query: 191 IHLF*LVNTLLFRFSCSTWEHFSRYCCHVYW 99
           IHL  LV TL +R   ++  H  R+C + YW
Sbjct: 159 IHLEILVQTLRYRVKDASSLHLLRFCLYEYW 189


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,403,807
Number of Sequences: 219361
Number of extensions: 1312306
Number of successful extensions: 3474
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3474
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3478785780
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)