ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags30j23 |
|---|---|
| Clone Library Name | barley_pub |
>SMC4_HUMAN (Q9NTJ3) Structural maintenance of chromosomes 4-like 1 protein| (Chromosome-associated polypeptide C) (hCAP-C) (XCAP-C homolog) Length = 1288 Score = 213 bits (541), Expect = 5e-55 Identities = 103/127 (81%), Positives = 115/127 (90%) Frame = -1 Query: 657 GDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLY 478 GDAELELVDSLDPFSEG++FSVRPPKKSWK I NLSGGEKTLSSLALVFALHHYKPTPLY Sbjct: 1157 GDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLY 1216 Query: 477 VMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSIT 298 MDEIDAALDFKNVSIV Y+ ++TK+AQFIIISLRNNMFE++DRL+GIYKT N TKS+ Sbjct: 1217 FMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISDRLIGIYKTYNITKSVA 1276 Query: 297 IDPGSFA 277 ++P A Sbjct: 1277 VNPKEIA 1283
>SMC4_MOUSE (Q8CG47) Structural maintenance of chromosomes 4-like 1 protein| (Chromosome-associated polypeptide C) (XCAP-C homolog) Length = 1286 Score = 213 bits (541), Expect = 5e-55 Identities = 103/127 (81%), Positives = 115/127 (90%) Frame = -1 Query: 657 GDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLY 478 GDAELELVDSLDPFSEG++FSVRPPKKSWK I NLSGGEKTLSSLALVFALHHYKPTPLY Sbjct: 1155 GDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLY 1214 Query: 477 VMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSIT 298 MDEIDAALDFKNVSIV Y+ ++TK+AQFIIISLRNNMFE++DRL+GIYKT N TKS+ Sbjct: 1215 FMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISDRLIGIYKTYNSTKSVA 1274 Query: 297 IDPGSFA 277 ++P A Sbjct: 1275 VNPKQIA 1281
>SMC4_MICAR (Q9ERA5) Structural maintenance of chromosomes 4-like 1 protein| (Chromosome-associated polypeptide C) (XCAP-C homolog) (Fragment) Length = 1243 Score = 213 bits (541), Expect = 5e-55 Identities = 103/127 (81%), Positives = 115/127 (90%) Frame = -1 Query: 657 GDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLY 478 GDAELELVDSLDPFSEG++FSVRPPKKSWK I NLSGGEKTLSSLALVFALHHYKPTPLY Sbjct: 1112 GDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLY 1171 Query: 477 VMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSIT 298 MDEIDAALDFKNVSIV Y+ ++TK+AQFIIISLRNNMFE++DRL+GIYKT N TKS+ Sbjct: 1172 FMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISDRLIGIYKTYNITKSVA 1231 Query: 297 IDPGSFA 277 ++P A Sbjct: 1232 VNPKEIA 1238
>SMC4_SCHPO (P41004) Structural maintenance of chromosome 4 (Chromosome| segregation protein cut3) (Cell untimely torn protein 3) Length = 1324 Score = 212 bits (540), Expect = 7e-55 Identities = 104/122 (85%), Positives = 117/122 (95%) Frame = -1 Query: 657 GDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLY 478 G+AELELVDSLDPFSEGV+FSV PPKKSWKNI+NLSGGEKTLSSLALVFALH+YKPTPLY Sbjct: 1196 GNAELELVDSLDPFSEGVLFSVMPPKKSWKNISNLSGGEKTLSSLALVFALHNYKPTPLY 1255 Query: 477 VMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSIT 298 VMDEIDAALDFKNVSIV +Y+K+RTK+AQFI+ISLR+NMFEL+ RLVGIYKT N TKS+T Sbjct: 1256 VMDEIDAALDFKNVSIVANYIKERTKNAQFIVISLRSNMFELSSRLVGIYKTANMTKSVT 1315 Query: 297 ID 292 I+ Sbjct: 1316 IN 1317
>SMC4_XENLA (P50532) Structural maintenance of chromosome 4| (Chromosome-associated protein C) (Chromosome assembly protein XCAP-C) Length = 1290 Score = 212 bits (540), Expect = 7e-55 Identities = 103/123 (83%), Positives = 113/123 (91%) Frame = -1 Query: 657 GDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLY 478 GDAELELVDSLDPFSEG++FSVRPPKKSWK I NLSGGEKTLSSLALVFALHHYKPTPLY Sbjct: 1151 GDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLY 1210 Query: 477 VMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSIT 298 MDEIDAALDFKNVSIV Y+ ++TK+AQFIIISLRNNMFE+ADRL+GIYKT N TKS+ Sbjct: 1211 FMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEIADRLIGIYKTHNTTKSVA 1270 Query: 297 IDP 289 +P Sbjct: 1271 TNP 1273
>SMC4_YEAST (Q12267) Structural maintenance of chromosome 4| Length = 1418 Score = 207 bits (528), Expect = 2e-53 Identities = 102/121 (84%), Positives = 112/121 (92%) Frame = -1 Query: 657 GDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLY 478 G+AELELVDSLDPFSEGV FSV PPKKSW+NI NLSGGEKTLSSLALVFALH YKPTPLY Sbjct: 1289 GNAELELVDSLDPFSEGVTFSVMPPKKSWRNITNLSGGEKTLSSLALVFALHKYKPTPLY 1348 Query: 477 VMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSIT 298 VMDEIDAALDF+NVSIV +Y+K+RTK+AQFI+ISLRNNMFELA +LVG+YK DN TKS T Sbjct: 1349 VMDEIDAALDFRNVSIVANYIKERTKNAQFIVISLRNNMFELAQQLVGVYKRDNRTKSTT 1408 Query: 297 I 295 I Sbjct: 1409 I 1409
>SMC4_CAEEL (Q20060) Structural maintenance of chromosome 4 (Protein smc-4)| Length = 1549 Score = 184 bits (468), Expect = 2e-46 Identities = 86/123 (69%), Positives = 105/123 (85%) Frame = -1 Query: 657 GDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLY 478 GDA+LE +D DPF +G+ F VRP KK+WK I LSGGEKTLSSLAL+FALH ++PTP Y Sbjct: 1244 GDAKLEYIDKDDPFRQGISFMVRPAKKAWKQIQFLSGGEKTLSSLALIFALHMFRPTPFY 1303 Query: 477 VMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSIT 298 VMDEIDAALD++NVSI+ YV+ +T++AQFIIISLRNNMFELA+RLVGIYK D CT+++ Sbjct: 1304 VMDEIDAALDYRNVSIIAQYVRQKTENAQFIIISLRNNMFELANRLVGIYKVDGCTRNVA 1363 Query: 297 IDP 289 IDP Sbjct: 1364 IDP 1366
>DPY27_CAEEL (P48996) Chromosome condensation protein dpy-27 (Protein dumpty-27)| Length = 1469 Score = 168 bits (426), Expect = 1e-41 Identities = 84/128 (65%), Positives = 102/128 (79%), Gaps = 5/128 (3%) Frame = -1 Query: 657 GDAELELVD---SLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPT 487 GDA L+ V+ S DPF G+ FSVRP KKSWK I NLSGGEKTL+SL VFA+HHY+PT Sbjct: 1208 GDASLKFVEEGKSTDPFDGGIKFSVRPAKKSWKLIENLSGGEKTLASLCFVFAMHHYRPT 1267 Query: 486 PLYVMDEIDAALDFKNVSIVGHYVK--DRTKDAQFIIISLRNNMFELADRLVGIYKTDNC 313 PLYVMDEIDAALD NVS++ +Y+K +RT++AQFIIISLRN MFE+ +RL+GIYK D Sbjct: 1268 PLYVMDEIDAALDLNNVSLIANYIKHSERTRNAQFIIISLRNQMFEVGNRLLGIYKIDGK 1327 Query: 312 TKSITIDP 289 T +I +DP Sbjct: 1328 TYNIMVDP 1335
>SMC1_YEAST (P32908) Structural maintenance of chromosome 1 (DA-box protein SMC1)| Length = 1225 Score = 126 bits (316), Expect = 7e-29 Identities = 61/131 (46%), Positives = 94/131 (71%), Gaps = 3/131 (2%) Frame = -1 Query: 657 GDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLY 478 G+A L + D +PF+ G+ + PP K +K++ LSGGEKT+++LAL+FA++ Y+P+P + Sbjct: 1095 GNASLTIEDEDEPFNAGIKYHATPPLKRFKDMEYLSGGEKTVAALALLFAINSYQPSPFF 1154 Query: 477 VMDEIDAALDFKNVSIVGHYV-KDRTKDAQFIIISLRNNMFELADRLVGIYK--TDNCTK 307 V+DE+DAALD NV + Y+ + R D QFI+ISL+N MFE +D LVG+Y+ +N +K Sbjct: 1155 VLDEVDAALDITNVQRIAAYIRRHRNPDLQFIVISLKNTMFEKSDALVGVYRQQQENSSK 1214 Query: 306 SITIDPGSFAE 274 IT+D ++AE Sbjct: 1215 IITLDLSNYAE 1225
>SMC1_SCHPO (O94383) Structural maintenance of chromosome 1 (Cohesin complex| subunit psm1) (Chromosome segregation protein smc1) Length = 1233 Score = 111 bits (277), Expect = 2e-24 Identities = 53/125 (42%), Positives = 88/125 (70%), Gaps = 3/125 (2%) Frame = -1 Query: 657 GDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLY 478 G A L L D +P+ G+ F PP K ++++ LSGGEKT+++LAL+FA+H Y+P+P + Sbjct: 1098 GTAYLTLDDLDEPYLGGIKFHAMPPMKRFRDMDQLSGGEKTMAALALLFAIHSYQPSPFF 1157 Query: 477 VMDEIDAALDFKNVSIVGHYVKDRTKDA-QFIIISLRNNMFELADRLVGIYK--TDNCTK 307 V+DEIDAALD NV+ + +Y++ QF++ISL+N +F ++ LVGIY+ +N ++ Sbjct: 1158 VLDEIDAALDQTNVTKIANYIRQHASSGFQFVVISLKNQLFSKSEALVGIYRDQQENSSR 1217 Query: 306 SITID 292 +++I+ Sbjct: 1218 TLSIN 1222
>SMC_METJA (Q59037) Chromosome partition protein smc homolog| Length = 1169 Score = 103 bits (256), Expect = 6e-22 Identities = 49/121 (40%), Positives = 77/121 (63%) Frame = -1 Query: 657 GDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLY 478 G +L L + +PF G++ P K ++ +SGGEK+L++LA +FA+ P+P Y Sbjct: 1047 GIGKLSLENEKNPFEGGILIDASPRGKKLLSLDAMSGGEKSLTALAFLFAIQRLNPSPFY 1106 Query: 477 VMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSIT 298 V+DE+DAALD KNVS++ +K+ +KD+QFI+IS R M AD + G+Y + +K + Sbjct: 1107 VLDEVDAALDVKNVSLIADMIKNASKDSQFIVISHREQMVSKADVVYGVYMENGLSKVVG 1166 Query: 297 I 295 I Sbjct: 1167 I 1167
>SM1L2_HUMAN (Q8NDV3) Structural maintenance of chromosome 1-like 2 protein| (SMC1beta protein) Length = 1235 Score = 102 bits (255), Expect = 8e-22 Identities = 50/126 (39%), Positives = 86/126 (68%), Gaps = 4/126 (3%) Frame = -1 Query: 624 DPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDF 445 +P+ EG+ ++ P K + + NLSGGEK +++LAL+FA+H ++P P +V+DE+DAALD Sbjct: 1101 EPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAVHSFRPAPFFVLDEVDAALDN 1160 Query: 444 KNVSIVGHYVKDRTKDA-QFIIISLRNNMFELADRLVGIY-KTDNC--TKSITIDPGSFA 277 N+ V Y+K++T+D Q I+ISL+ + AD L+GIY + D+C ++ +T+D + Sbjct: 1161 TNIGKVSSYIKEQTQDQFQMIVISLKEEFYSRADALIGIYPEYDDCMFSRVLTLDLSQYP 1220 Query: 276 ES*NQQ 259 ++ Q+ Sbjct: 1221 DTEGQE 1226
>SMC1A_RAT (Q9Z1M9) Structural maintenance of chromosome 1-like 1 protein| (SMC-protein) Length = 1233 Score = 98.2 bits (243), Expect = 2e-20 Identities = 49/115 (42%), Positives = 81/115 (70%), Gaps = 4/115 (3%) Frame = -1 Query: 624 DPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDF 445 +P+ +G+ ++ P K ++ + NLSGGEKT+++LAL+FA+H YKP P +V+DEIDAALD Sbjct: 1105 EPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDN 1164 Query: 444 KNVSIVGHYVKDR-TKDAQFIIISLRNNMFELADRLVGIY-KTDNC--TKSITID 292 N+ V +Y+K++ T + Q I+ISL+ + A+ L+G+Y + +C +K +T D Sbjct: 1165 TNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESLIGVYPEQGDCVISKVLTFD 1219
>SMC1A_MOUSE (Q9CU62) Structural maintenance of chromosome 1-like 1 protein| (SMC1alpha protein) (Chromosome segregation protein SmcB) (Sb1.8) Length = 1233 Score = 98.2 bits (243), Expect = 2e-20 Identities = 49/115 (42%), Positives = 81/115 (70%), Gaps = 4/115 (3%) Frame = -1 Query: 624 DPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDF 445 +P+ +G+ ++ P K ++ + NLSGGEKT+++LAL+FA+H YKP P +V+DEIDAALD Sbjct: 1105 EPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDN 1164 Query: 444 KNVSIVGHYVKDR-TKDAQFIIISLRNNMFELADRLVGIY-KTDNC--TKSITID 292 N+ V +Y+K++ T + Q I+ISL+ + A+ L+G+Y + +C +K +T D Sbjct: 1165 TNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESLIGVYPEQGDCVISKVLTFD 1219
>SMC1A_HUMAN (Q14683) Structural maintenance of chromosome 1-like 1 protein| (SMC1alpha protein) (DXS423E protein) (Sb1.8) Length = 1233 Score = 98.2 bits (243), Expect = 2e-20 Identities = 49/115 (42%), Positives = 81/115 (70%), Gaps = 4/115 (3%) Frame = -1 Query: 624 DPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDF 445 +P+ +G+ ++ P K ++ + NLSGGEKT+++LAL+FA+H YKP P +V+DEIDAALD Sbjct: 1105 EPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDN 1164 Query: 444 KNVSIVGHYVKDR-TKDAQFIIISLRNNMFELADRLVGIY-KTDNC--TKSITID 292 N+ V +Y+K++ T + Q I+ISL+ + A+ L+G+Y + +C +K +T D Sbjct: 1165 TNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESLIGVYPEQGDCVISKVLTFD 1219
>SMC1A_BOVIN (O97593) Structural maintenance of chromosome 1-like 1 protein| (SMC-protein) Length = 1233 Score = 98.2 bits (243), Expect = 2e-20 Identities = 49/115 (42%), Positives = 81/115 (70%), Gaps = 4/115 (3%) Frame = -1 Query: 624 DPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDF 445 +P+ +G+ ++ P K ++ + NLSGGEKT+++LAL+FA+H YKP P +V+DEIDAALD Sbjct: 1105 EPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDN 1164 Query: 444 KNVSIVGHYVKDR-TKDAQFIIISLRNNMFELADRLVGIY-KTDNC--TKSITID 292 N+ V +Y+K++ T + Q I+ISL+ + A+ L+G+Y + +C +K +T D Sbjct: 1165 TNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESLIGVYPEQGDCVISKVLTFD 1219
>SMC1A_XENLA (O93308) Structural maintenance of chromosome 1 protein (xSMC1)| Length = 1232 Score = 98.2 bits (243), Expect = 2e-20 Identities = 48/115 (41%), Positives = 82/115 (71%), Gaps = 4/115 (3%) Frame = -1 Query: 624 DPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDF 445 +P+ +G+ ++ P K ++ + NLSGGEKT+++LAL+FA+H YKP+P +V+DEIDAALD Sbjct: 1105 EPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKPSPFFVLDEIDAALDN 1164 Query: 444 KNVSIVGHYVKDRT-KDAQFIIISLRNNMFELADRLVGIY-KTDNC--TKSITID 292 N+ V +Y+K+++ + Q I+ISL+ + A+ L+G+Y + +C +K +T D Sbjct: 1165 TNIGKVANYIKEQSMSNFQAIVISLKEEFYTKAESLIGVYPEQGDCVISKVLTFD 1219
>SM1L2_MOUSE (Q920F6) Structural maintenance of chromosomes 1-like 2 protein| (SMC1beta protein) Length = 1248 Score = 97.4 bits (241), Expect = 3e-20 Identities = 48/126 (38%), Positives = 84/126 (66%), Gaps = 4/126 (3%) Frame = -1 Query: 624 DPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDF 445 +P+ +G+ ++ P K + + NLSGGEK +++LAL+FA+H ++P P +V+DE+DAALD Sbjct: 1100 EPYLDGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAVHSFRPAPFFVLDEVDAALDN 1159 Query: 444 KNVSIVGHYVKDRTKDA-QFIIISLRNNMFELADRLVGIYKTDN-CTKS--ITIDPGSFA 277 N+ V Y+K+++++ Q IIISL+ + AD L+G+Y N C S +T+D + Sbjct: 1160 TNIGKVSSYIKEQSQEQFQMIIISLKEEFYSKADALIGVYPEHNECMFSHVLTLDLSKYP 1219 Query: 276 ES*NQQ 259 ++ +Q+ Sbjct: 1220 DTEDQE 1225
>SMC_BACSU (P51834) Chromosome partition protein smc| Length = 1186 Score = 87.4 bits (215), Expect = 3e-17 Identities = 46/109 (42%), Positives = 65/109 (59%) Frame = -1 Query: 657 GDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLY 478 G AEL L D D GV +PP K +N+ LSGGE+ L+++AL+F++ +P P Sbjct: 1055 GRAELRLTDPNDLLHSGVEIIAQPPGKKLQNLNLLSGGERALTAIALLFSILKVRPVPFC 1114 Query: 477 VMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGI 331 V+DE++AALD NV Y+K + D QFI+I+ R E AD L G+ Sbjct: 1115 VLDEVEAALDEANVFRFAQYLKKYSSDTQFIVITHRKGTMEEADVLYGV 1163
>SMC2_SCHPO (P41003) Structural maintenance of chromosome 2 (Chromosome| segregation protein cut14) (Cell untimely torn protein 14) Length = 1172 Score = 84.0 bits (206), Expect = 4e-16 Identities = 43/104 (41%), Positives = 70/104 (67%) Frame = -1 Query: 651 AELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVM 472 AEL+ ++ + F++G+ V+ ++A LSGG+++L +LAL+ +L YKP P+Y++ Sbjct: 1055 AELQPPENKE-FTDGLEIHVKIGSIWKDSLAELSGGQRSLVALALIMSLLKYKPAPMYIL 1113 Query: 471 DEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRL 340 DEIDAALD + +G +K + K +QFII+SL+ MF A+RL Sbjct: 1114 DEIDAALDLSHTQNIGRLIKTKFKGSQFIIVSLKEGMFTNANRL 1157
>P115_MYCHR (P41508) Protein P115| Length = 979 Score = 82.4 bits (202), Expect = 1e-15 Identities = 41/109 (37%), Positives = 67/109 (61%) Frame = -1 Query: 657 GDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLY 478 G AE+ D D + GV S +PP K+ KN+ SGGEK + +++L+FA+ +P PL Sbjct: 844 GKAEIHFTDKNDILNSGVEISAQPPGKTIKNLRLFSGGEKAIIAISLLFAILKARPIPLC 903 Query: 477 VMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGI 331 ++DE++AALD NV ++K ++ QF+II+ R+ D+L+G+ Sbjct: 904 ILDEVEAALDESNVIRYVEFLKLLKENTQFLIITHRSGTMSRVDQLLGV 952
>SMC2_YEAST (P38989) Structural maintenance of chromosome 2 (DA-box protein SMC2)| Length = 1170 Score = 81.6 bits (200), Expect = 2e-15 Identities = 35/79 (44%), Positives = 58/79 (73%), Gaps = 1/79 (1%) Frame = -1 Query: 573 WK-NIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKD 397 WK ++ LSGG+++L +L+L+ AL ++P P+Y++DE+DAALD + +GH +K R K Sbjct: 1077 WKESLIELSGGQRSLIALSLIMALLQFRPAPMYILDEVDAALDLSHTQNIGHLIKTRFKG 1136 Query: 396 AQFIIISLRNNMFELADRL 340 +QFI++SL+ MF A+R+ Sbjct: 1137 SQFIVVSLKEGMFANANRV 1155
>SMC_MYCTU (Q10970) Chromosome partition protein smc| Length = 1205 Score = 75.9 bits (185), Expect = 1e-13 Identities = 38/109 (34%), Positives = 64/109 (58%) Frame = -1 Query: 657 GDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLY 478 G+ L L + D + G+ RPP K ++ LSGGEK L+++A++ A+ +P+P Y Sbjct: 1069 GEGRLRLTEPDDMLTTGIEVEARPPGKKITRLSLLSGGEKALTAVAMLVAIFRARPSPFY 1128 Query: 477 VMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGI 331 +MDE++AALD N+ + + + +Q III+ + E+AD L G+ Sbjct: 1129 IMDEVEAALDDVNLRRLLSLFEQLREQSQIIIITHQKPTMEVADALYGV 1177
>MIX1_CAEEL (Q09591) Mitotic chromosome and X-chromosome-associated protein mix-1| (Structural maintenance of chromosome 2) (Lethal protein 29) Length = 1244 Score = 74.7 bits (182), Expect = 2e-13 Identities = 38/107 (35%), Positives = 63/107 (58%) Frame = -1 Query: 567 NIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQF 388 ++ LSGG+++L +L+L+ A+ +KP PLY++DE+DAALD + + +G +K QF Sbjct: 1096 SLHELSGGQRSLVALSLILAMLKFKPAPLYILDEVDAALDLSHTANIGMMIKTHFHHNQF 1155 Query: 387 IIISLRNNMFELADRLVGIYKTDNCTKSITIDPGSFAES*NQQLLEA 247 II+SL+ MF AD L D + ++ G A ++L+A Sbjct: 1156 IIVSLKQGMFSNADVLFQTRFADGHSTCTRLNGGDIAVLCQDKVLQA 1202
>SMC2_XENLA (P50533) Structural maintenance of chromosome 2| (Chromosome-associated protein E) (Chromosome assembly protein XCAP-E) Length = 1203 Score = 74.3 bits (181), Expect = 3e-13 Identities = 32/80 (40%), Positives = 57/80 (71%), Gaps = 1/80 (1%) Frame = -1 Query: 576 SWK-NIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTK 400 +WK N+ LSGG+++L +L+L+ A+ +KP P+Y++DE+DAALD + +G ++ + Sbjct: 1078 TWKENLTELSGGQRSLVALSLILAMLLFKPAPIYILDEVDAALDLSHTQNIGQMLRTHFR 1137 Query: 399 DAQFIIISLRNNMFELADRL 340 +QFI++SL++ MF A+ L Sbjct: 1138 HSQFIVVSLKDGMFNNANVL 1157
>SMC2_CHICK (Q90988) Structural maintenance of chromosome 2 (Chromosome scaffold| protein ScII) Length = 1189 Score = 74.3 bits (181), Expect = 3e-13 Identities = 32/79 (40%), Positives = 56/79 (70%), Gaps = 1/79 (1%) Frame = -1 Query: 573 WK-NIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKD 397 WK N+ LSGG+++L++L+L+ A+ +KP P+Y++DE+DAALD + +G + K Sbjct: 1078 WKENLTELSGGQRSLAALSLILAILLFKPAPIYILDEVDAALDLSHTQNIGQMLHAHFKQ 1137 Query: 396 AQFIIISLRNNMFELADRL 340 +QF+++SL++ MF A+ L Sbjct: 1138 SQFLVVSLKDGMFNNANVL 1156
>SMC_MYCLE (Q9CBT5) Chromosome partition protein smc| Length = 1203 Score = 72.0 bits (175), Expect = 1e-12 Identities = 38/109 (34%), Positives = 62/109 (56%) Frame = -1 Query: 657 GDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLY 478 G+ L L D D + G+ RP K ++ LSGGEK+L ++A++ A+ +P+P Y Sbjct: 1067 GEGRLRLTDPDDMLTTGIEVEARPSGKKVSRLSLLSGGEKSLIAVAMLVAIFKARPSPFY 1126 Query: 477 VMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGI 331 +MDE++AALD N+ + + +Q III+ + E+AD L G+ Sbjct: 1127 IMDEVEAALDDVNLCRLIGVFEQLRGQSQLIIITHQKPTMEVADTLYGV 1175
>SMC2_HUMAN (O95347) Structural maintenance of chromosome 2-like 1 protein| (Chromosome-associated protein E) (hCAP-E) (XCAP-E homolog) Length = 1197 Score = 71.6 bits (174), Expect = 2e-12 Identities = 31/80 (38%), Positives = 55/80 (68%), Gaps = 1/80 (1%) Frame = -1 Query: 576 SWK-NIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTK 400 +WK N+ LSGG+++L +L+L+ ++ +KP P+Y++DE+DAALD + +G ++ Sbjct: 1077 TWKENLTELSGGQRSLVALSLILSMLLFKPAPIYILDEVDAALDLSHTQNIGQMLRTHFT 1136 Query: 399 DAQFIIISLRNNMFELADRL 340 +QFI++SL+ MF A+ L Sbjct: 1137 HSQFIVVSLKEGMFNNANVL 1156
>SMC2_MOUSE (Q8CG48) Structural maintenance of chromosome 2-like 1 protein| (Chromosome-associated protein E) (XCAP-E homolog) (FGF-inducible protein 16) Length = 1191 Score = 71.6 bits (174), Expect = 2e-12 Identities = 31/80 (38%), Positives = 55/80 (68%), Gaps = 1/80 (1%) Frame = -1 Query: 576 SWK-NIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTK 400 +WK N+ LSGG+++L +L+L+ ++ +KP P+Y++DE+DAALD + +G ++ Sbjct: 1077 TWKENLTELSGGQRSLVALSLILSMLLFKPAPIYILDEVDAALDLSHTQNIGQMLRTHFT 1136 Query: 399 DAQFIIISLRNNMFELADRL 340 +QFI++SL+ MF A+ L Sbjct: 1137 HSQFIVVSLKEGMFNNANVL 1156
>P115_MYCGE (P47540) Protein P115 homolog| Length = 982 Score = 71.2 bits (173), Expect = 3e-12 Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 1/123 (0%) Frame = -1 Query: 657 GDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLY 478 G ++ D + G+ PP K+ N+ LSGGEKTL +L+++F++ PL Sbjct: 846 GSCQIRYTDPSNVLVSGIDVFANPPGKNIANLMLLSGGEKTLVALSVLFSILKVSAFPLV 905 Query: 477 VMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVG-IYKTDNCTKSI 301 ++DE ++ALD NV + +K +K+ QF+II+ R D L+G +T TK+ Sbjct: 906 ILDEAESALDPANVERFANIIKTASKNTQFLIITHRQGTMMKCDMLLGAAMQTKGVTKTF 965 Query: 300 TID 292 ++ Sbjct: 966 AVE 968
>YAT3_RHORU (P15016) Hypothetical protein in ATPase CF(0) subunits 3'region| (URF3) (Fragment) Length = 173 Score = 68.9 bits (167), Expect = 1e-11 Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 4/123 (3%) Frame = -1 Query: 657 GDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLY 478 G A L L++S DP G+ PP K +++ LSGGE+ L++ AL+FA+ P P+ Sbjct: 31 GRAHLTLIESDDPLEAGLEIMASPPGKRLQSLGLLSGGEQALTATALLFAVFLTNPAPIC 90 Query: 477 VMDEIDAALDFKNV----SIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCT 310 V+DE+DA LD NV +++ H T +F++++ DRL G+ + Sbjct: 91 VLDEVDAPLDDANVDRFCAMLRHLTD--TTGTRFLVVTHHRMTMARMDRLFGVTMAERGV 148 Query: 309 KSI 301 S+ Sbjct: 149 SSL 151
>SMC3_PONPY (Q5R4K5) Structural maintenance of chromosome 3 (Chondroitin sulfate| proteoglycan 6) Length = 1217 Score = 68.2 bits (165), Expect = 2e-11 Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 1/110 (0%) Frame = -1 Query: 657 GDAELELVDSLDPFSE-GVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPL 481 G V S+D F+ G+ S + + + LSGG+K+L +LAL+FA+ P P Sbjct: 1080 GSGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPF 1139 Query: 480 YVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGI 331 Y+ DEID ALD ++ V + + AQFI + R + E AD+ G+ Sbjct: 1140 YLFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGV 1189
>SMC3_MOUSE (Q9CW03) Structural maintenance of chromosome 3 (Chondroitin sulfate| proteoglycan 6) (Chromosome segregation protein SmcD) (Bamacan) (Basement membrane-associated chondroitin proteoglycan) (Mad member-interacting protein 1) Length = 1217 Score = 68.2 bits (165), Expect = 2e-11 Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 1/110 (0%) Frame = -1 Query: 657 GDAELELVDSLDPFSE-GVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPL 481 G V S+D F+ G+ S + + + LSGG+K+L +LAL+FA+ P P Sbjct: 1080 GSGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPF 1139 Query: 480 YVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGI 331 Y+ DEID ALD ++ V + + AQFI + R + E AD+ G+ Sbjct: 1140 YLFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGV 1189
>SMC3_HUMAN (Q9UQE7) Structural maintenance of chromosome 3 (Chondroitin sulfate| proteoglycan 6) (Chromosome-associated polypeptide) (hCAP) (Bamacan) (Basement membrane-associated chondroitin proteoglycan) Length = 1217 Score = 68.2 bits (165), Expect = 2e-11 Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 1/110 (0%) Frame = -1 Query: 657 GDAELELVDSLDPFSE-GVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPL 481 G V S+D F+ G+ S + + + LSGG+K+L +LAL+FA+ P P Sbjct: 1080 GSGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPF 1139 Query: 480 YVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGI 331 Y+ DEID ALD ++ V + + AQFI + R + E AD+ G+ Sbjct: 1140 YLFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGV 1189
>SMC3_BOVIN (O97594) Structural maintenance of chromosome 3 (Chondroitin sulfate| proteoglycan 6) Length = 1218 Score = 67.8 bits (164), Expect = 3e-11 Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 1/110 (0%) Frame = -1 Query: 657 GDAELELVDSLDPFSE-GVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPL 481 G V S+D F+ G+ S + + + LSGG+K+L +LAL+FA+ P P Sbjct: 1081 GSGPQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPF 1140 Query: 480 YVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGI 331 Y+ DEID ALD ++ V + + AQFI + R + E AD+ G+ Sbjct: 1141 YLFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGV 1190
>P115_MYCPN (P75361) Protein P115 homolog| Length = 982 Score = 67.4 bits (163), Expect = 4e-11 Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 1/122 (0%) Frame = -1 Query: 657 GDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLY 478 G ++ D+ + G+ PP K+ N+ LSGGEKTL +L+++F++ PL Sbjct: 846 GSCQIRYTDTDNVLLSGIEVFANPPGKNVANLMLLSGGEKTLVALSVLFSILRVSAFPLV 905 Query: 477 VMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVG-IYKTDNCTKSI 301 ++DE ++ALD NV + + + + + QF+II+ R D L+G +T TK+ Sbjct: 906 ILDEAESALDPANVERFANIIGNSSNNTQFLIITHRQGTMMKCDMLLGAAMQTKGVTKTF 965 Query: 300 TI 295 + Sbjct: 966 AV 967
>SMC3_RAT (P97690) Structural maintenance of chromosome 3 (Chondroitin sulfate| proteoglycan 6) (Chromosome segregation protein SmcD) (Bamacan) (Basement membrane-associated chondroitin proteoglycan) Length = 1191 Score = 65.9 bits (159), Expect = 1e-10 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 1/109 (0%) Frame = -1 Query: 657 GDAELELVDSLDPFSE-GVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPL 481 G V S+D F+ G+ S + + + LSGG+K+L +LAL+FA+ P P Sbjct: 1080 GSGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPF 1139 Query: 480 YVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVG 334 Y+ DEID ALD ++ V + + AQFI + R + E AD+ G Sbjct: 1140 YLFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKSSG 1188
>SMC3_SCHPO (O42649) Structural maintenance of chromosome 3 (Cohesin complex Psm3| subunit) Length = 1194 Score = 65.9 bits (159), Expect = 1e-10 Identities = 32/79 (40%), Positives = 48/79 (60%) Frame = -1 Query: 567 NIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQF 388 NI LSGG+K+L +L L+FA+ P P ++DE DA LD + S + VK+ +K +QF Sbjct: 1093 NINQLSGGQKSLCALTLIFAIQRCDPAPFNILDECDANLDAQYRSAIAAMVKEMSKTSQF 1152 Query: 387 IIISLRNNMFELADRLVGI 331 I + R M ++AD G+ Sbjct: 1153 ICTTFRPEMVKVADNFYGV 1171
>SMC3_YEAST (P47037) Structural maintenance of chromosome 3 (DA-box protein SMC3)| Length = 1230 Score = 64.3 bits (155), Expect = 3e-10 Identities = 30/75 (40%), Positives = 50/75 (66%) Frame = -1 Query: 567 NIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQF 388 ++ LSGG+KT+ ++AL+ A+ P Y+ DEIDAALD + + V +K+ +K+AQF Sbjct: 1122 HVEQLSGGQKTVCAIALILAIQMVDPASFYLFDEIDAALDKQYRTAVATLLKELSKNAQF 1181 Query: 387 IIISLRNNMFELADR 343 I + R +M ++AD+ Sbjct: 1182 ICTTFRTDMLQVADK 1196
>SMC3_XENLA (O93309) Structural maintenance of chromosome 3 (Fragment)| Length = 234 Score = 63.2 bits (152), Expect = 7e-10 Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 1/103 (0%) Frame = -1 Query: 636 VDSLDPFSE-GVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEID 460 V S D F+ G+ S + + + LS G+K+L +L L+FA+ P P Y+ DEID Sbjct: 104 VPSFDQFTGVGIRVSFTGKQAEMREMQQLSRGQKSLVALRLIFAIQKCDPAPFYLFDEID 163 Query: 459 AALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGI 331 ALD ++ V + + AQFI + R + E AD+ G+ Sbjct: 164 QALDAQHRKAVSDMIMELASHAQFITTTFRPELLESADKFYGV 206
>SUDA_EMENI (Q00737) Chromosome segregation protein sudA (DA-box protein sudA)| Length = 1211 Score = 60.1 bits (144), Expect = 6e-09 Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 2/95 (2%) Frame = -1 Query: 609 GVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSI 430 G+ S + I LSGG+K+L +LALVFA+ P P Y+ DEIDA LD + + Sbjct: 1091 GISVSFNSKHDDQQRIQQLSGGQKSLCALALVFAIQACDPAPFYLFDEIDANLDAQYRTA 1150 Query: 429 VGHYVK--DRTKDAQFIIISLRNNMFELADRLVGI 331 V +K + + QFI + R M +A++ G+ Sbjct: 1151 VAQMLKTISDSTNGQFICTTFRPEMLHVAEKCYGV 1185
>MSBA_CHRVO (Q7NZU6) Lipid A export ATP-binding/permease protein msbA| Length = 584 Score = 40.8 bits (94), Expect = 0.004 Identities = 28/82 (34%), Positives = 49/82 (59%) Frame = -1 Query: 570 KNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQ 391 +N A LSGG++ LA+ AL K PL ++DE +ALD ++ +V +++ K+ Sbjct: 474 ENGARLSGGQR--QRLAIARAL--LKNAPLLILDEATSALDTQSERLVQAALENLMKNRT 529 Query: 390 FIIISLRNNMFELADRLVGIYK 325 I+I+ R + E ADR+V +++ Sbjct: 530 TIVIAHRLSTIENADRIVVMHQ 551
>RECN_STRCO (Q9S220) DNA repair protein recN (Recombination protein N)| Length = 572 Score = 39.7 bits (91), Expect = 0.008 Identities = 22/79 (27%), Positives = 39/79 (49%) Frame = -1 Query: 552 SGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISL 373 SGGE + LA+ P P Y+ DE+DA + K +G + + AQ ++++ Sbjct: 446 SGGELSRVMLAVEVVFAGTDPVPTYLFDEVDAGVGGKAAVEIGRRLARLARSAQVVVVTH 505 Query: 372 RNNMFELADRLVGIYKTDN 316 + ADR + + KT++ Sbjct: 506 LPQVAAFADRQLLVEKTND 524
>SMC6_SCHPO (P53692) Structural maintenance of chromosome 6 (DNA repair protein| rad18) Length = 1140 Score = 38.9 bits (89), Expect = 0.014 Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 3/72 (4%) Frame = -1 Query: 582 KKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRT 403 +KS ++ LSGGEK+ +++ ++ ++ PL +DE D +D N + + D Sbjct: 1035 EKSKVSVQGLSGGEKSFATICMLLSIWEAMSCPLRCLDEFDVFMDAVNRLVSIKMMVDSA 1094 Query: 402 KDA---QFIIIS 376 KD+ QFI I+ Sbjct: 1095 KDSSDKQFIFIT 1106
>MCJD_ECOLI (Q9X2W0) Microcin J25 export ATP-binding/permease protein mcjD| (Microcin J25 secretion ATP-binding protein mcjD) (Microcin J25 immunity protein) Length = 580 Score = 38.9 bits (89), Expect = 0.014 Identities = 27/71 (38%), Positives = 39/71 (54%) Frame = -1 Query: 558 NLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 379 N SGG+K SLA +F KP + ++DE +ALD+ N S + ++ DA I I Sbjct: 480 NYSGGQKQRISLARLFLR---KPA-IIIIDEATSALDYINESEILSSIRTHFPDALIINI 535 Query: 378 SLRNNMFELAD 346 S R N+ E +D Sbjct: 536 SHRINLLECSD 546
>RECN_RICPR (Q9ZDY2) DNA repair protein recN (Recombination protein N)| Length = 554 Score = 38.9 bits (89), Expect = 0.014 Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 5/114 (4%) Frame = -1 Query: 648 ELELVDSLDPFSEG---VVF--SVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTP 484 ++E+ ++DP + G +VF S P K+ + SGGE + LAL +L P Sbjct: 388 KIEIKTAIDPTASGNDDIVFKASTNPGMKAEEINKIASGGELSRFMLALKTSLFDKMIKP 447 Query: 483 LYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKT 322 + DEID + + VG +K + Q I+I+ + + AD + I KT Sbjct: 448 SIIFDEIDVGIGGEAADKVGDRLKKLSSVTQVIVITHQPQVAGKADLHIKIEKT 501
>MSBA_MANSM (Q65U21) Lipid A export ATP-binding/permease protein msbA| Length = 585 Score = 38.5 bits (88), Expect = 0.018 Identities = 25/88 (28%), Positives = 50/88 (56%) Frame = -1 Query: 570 KNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQ 391 +N A+LSGG++ LA+ AL + +P+ ++DE +ALD ++ + +++ KD Sbjct: 479 ENGASLSGGQR--QRLAIARAL--LRDSPVLILDEATSALDTESERAIQAALEELQKDRT 534 Query: 390 FIIISLRNNMFELADRLVGIYKTDNCTK 307 ++I+ R + E AD ++ I + C + Sbjct: 535 VLVIAHRLSTIEKADEILVIDHGEICER 562
>MSBA_FRANO (Q47908) Lipid A export ATP-binding/permease protein msbA| Length = 593 Score = 37.0 bits (84), Expect = 0.052 Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 1/107 (0%) Frame = -1 Query: 567 NIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQF 388 N + LSGG++ S+A K P+ + DE +ALD ++ +V ++ T+ Sbjct: 484 NGSKLSGGQRQRISIARALL----KNAPVLIFDEATSALDNESERVVQQALESLTESCTT 539 Query: 387 IIISLRNNMFELADRLVGIYKTDNCTKSITIDPGSFAES-*NQQLLE 250 I+I+ R + E AD++V +D G ES +Q+LLE Sbjct: 540 IVIAHRLSTVENADKIV------------VMDGGKVVESGKHQELLE 574
>SMC6_YEAST (Q12749) Structural maintenance of chromosome 6 (DNA repair protein| RHC18) (Rad18 homolog) Length = 1114 Score = 36.2 bits (82), Expect = 0.089 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 3/68 (4%) Frame = -1 Query: 570 KNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKD-- 397 +N+ LSGGEK+ S +AL+ A + + +DE D +D N I + + KD Sbjct: 1014 RNVDTLSGGEKSFSQMALLLATWKPMRSRIIALDEFDVFMDQVNRKIGTTLIVKKLKDIA 1073 Query: 396 -AQFIIIS 376 Q III+ Sbjct: 1074 RTQTIIIT 1081
>SMC5_YEAST (Q08204) Structural maintenance of chromosome 5| Length = 1093 Score = 36.2 bits (82), Expect = 0.089 Identities = 16/42 (38%), Positives = 26/42 (61%) Frame = -1 Query: 552 SGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIV 427 SGGE+ +S++ + AL + P V+DEI+ +D +N IV Sbjct: 987 SGGERAVSTVLYMIALQEFTSAPFRVVDEINQGMDSRNERIV 1028
>MSBA_HAEIN (P44407) Lipid A export ATP-binding/permease protein msbA| Length = 587 Score = 35.8 bits (81), Expect = 0.12 Identities = 23/80 (28%), Positives = 46/80 (57%) Frame = -1 Query: 570 KNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQ 391 +N +LSGG++ LA+ AL + +P+ ++DE +ALD ++ + +++ KD Sbjct: 481 ENGTSLSGGQR--QRLAIARAL--LRNSPVLILDEATSALDTESERAIQSALEELKKDRT 536 Query: 390 FIIISLRNNMFELADRLVGI 331 ++I+ R + E AD ++ I Sbjct: 537 VVVIAHRLSTIENADEILVI 556
>MSBA_RALSO (Q8XXB6) Lipid A export ATP-binding/permease protein msbA| Length = 592 Score = 35.4 bits (80), Expect = 0.15 Identities = 29/101 (28%), Positives = 52/101 (51%) Frame = -1 Query: 639 LVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEID 460 L D +D +GV ++ N + LSGG++ LA+ A+ YK P+ ++DE Sbjct: 468 LTDVVDNLPDGVDTNIGD------NGSKLSGGQR--QRLAIARAV--YKDAPILILDEAT 517 Query: 459 AALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLV 337 +ALD ++ V ++ + ++I+ R + E ADR+V Sbjct: 518 SALDSESERQVQAALEALMQGRTTLVIAHRLSTIENADRIV 558
>CBIO2_TREDE (Q73P93) Putative cobalt import ATP-binding protein cbiO 2| Length = 491 Score = 35.0 bits (79), Expect = 0.20 Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 2/80 (2%) Frame = -1 Query: 570 KNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKD-RTKDA 394 + ++ LSGGEK ++A V L T + +MDE + LD+++V ++ + ++K Sbjct: 137 RKLSELSGGEKQKIAIASVLML----DTRVVLMDEPSSNLDYQSVELLTQILAQLKSKGY 192 Query: 393 QFIIISLR-NNMFELADRLV 337 +II R + + EL DRL+ Sbjct: 193 TLLIIEHRLHYLAELCDRLI 212
>Y339_CHLMU (Q9PKX1) Probable metal transport system ATP-binding protein TC0339| Length = 259 Score = 35.0 bits (79), Expect = 0.20 Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 2/92 (2%) Frame = -1 Query: 570 KNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQ 391 + I LSGG++ + LA + LY+MDE+ +A+D + +V ++D K+ + Sbjct: 137 RQIGKLSGGQQQRAFLARSLM----QKADLYLMDELFSAIDMASYRMVVDVLQDLKKEGK 192 Query: 390 FIIISLR--NNMFELADRLVGIYKTDNCTKSI 301 I++ +N+ +L D ++ + K C+ S+ Sbjct: 193 TIVVIHHDLSNVRQLFDHVILLNKHLVCSGSV 224
>MSBA_BURPS (Q63VX7) Lipid A export ATP-binding/permease protein msbA| Length = 596 Score = 35.0 bits (79), Expect = 0.20 Identities = 24/77 (31%), Positives = 42/77 (54%) Frame = -1 Query: 567 NIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQF 388 N LSGG++ LA+ A+ YK P+ ++DE +ALD ++ V ++ K Sbjct: 488 NGMRLSGGQR--QRLAIARAI--YKDAPILILDEATSALDSESERHVQAALETLMKGRTT 543 Query: 387 IIISLRNNMFELADRLV 337 ++I+ R + E ADR++ Sbjct: 544 LVIAHRLSTIERADRIL 560
>MSBA_BURMA (Q62IG3) Lipid A export ATP-binding/permease protein msbA| Length = 596 Score = 35.0 bits (79), Expect = 0.20 Identities = 24/77 (31%), Positives = 42/77 (54%) Frame = -1 Query: 567 NIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQF 388 N LSGG++ LA+ A+ YK P+ ++DE +ALD ++ V ++ K Sbjct: 488 NGMRLSGGQR--QRLAIARAI--YKDAPILILDEATSALDSESERHVQAALETLMKGRTT 543 Query: 387 IIISLRNNMFELADRLV 337 ++I+ R + E ADR++ Sbjct: 544 LVIAHRLSTIERADRIL 560
>RECN_RICCN (Q92J40) DNA repair protein recN (Recombination protein N)| Length = 545 Score = 35.0 bits (79), Expect = 0.20 Identities = 25/77 (32%), Positives = 36/77 (46%) Frame = -1 Query: 552 SGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISL 373 SGGE + LAL AL P + DEID + + VG +K + Q I+I+ Sbjct: 424 SGGELSRFMLALKTALFDKMVKPSIIFDEIDVGISGEVADKVGERLKKLSSVTQVIVITH 483 Query: 372 RNNMFELADRLVGIYKT 322 + + AD + I KT Sbjct: 484 QPQVAGKADLHIKIEKT 500
>MSBA_NEIMB (Q9JXR3) Lipid A export ATP-binding/permease protein msbA| Length = 621 Score = 35.0 bits (79), Expect = 0.20 Identities = 22/77 (28%), Positives = 42/77 (54%) Frame = -1 Query: 567 NIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQF 388 N +NLSGG++ ++A K P+ ++DE +ALD ++ +V ++ ++ Sbjct: 510 NGSNLSGGQRQRVAIARAIL----KDAPILLLDEATSALDNESERLVQQALERLMENRTG 565 Query: 387 IIISLRNNMFELADRLV 337 II++ R E ADR++ Sbjct: 566 IIVAHRLTTIEGADRII 582
>MSBA_NEIMA (Q9JW59) Lipid A export ATP-binding/permease protein msbA| Length = 621 Score = 35.0 bits (79), Expect = 0.20 Identities = 22/77 (28%), Positives = 42/77 (54%) Frame = -1 Query: 567 NIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQF 388 N +NLSGG++ ++A K P+ ++DE +ALD ++ +V ++ ++ Sbjct: 510 NGSNLSGGQRQRVAIARAIL----KDAPILLLDEATSALDNESERLVQQALERLMENRTG 565 Query: 387 IIISLRNNMFELADRLV 337 II++ R E ADR++ Sbjct: 566 IIVAHRLTTIEGADRII 582
>MSBA_VIBPA (Q87R16) Lipid A export ATP-binding/permease protein msbA| Length = 582 Score = 34.7 bits (78), Expect = 0.26 Identities = 20/78 (25%), Positives = 42/78 (53%) Frame = -1 Query: 570 KNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQ 391 +N A+LSGG++ ++A + P+ ++DE +ALD ++ + + + KD Sbjct: 476 ENGASLSGGQRQRVAIARALL----RDAPVLILDEATSALDTESERAIQAALDELQKDKT 531 Query: 390 FIIISLRNNMFELADRLV 337 ++I+ R + E AD ++ Sbjct: 532 VLVIAHRLSTIEKADEIL 549
>MSBA_ACIAD (Q6F9X0) Lipid A export ATP-binding/permease protein msbA| Length = 574 Score = 34.7 bits (78), Expect = 0.26 Identities = 21/74 (28%), Positives = 39/74 (52%) Frame = -1 Query: 558 NLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 379 NLSGG++ ++A K P+ ++DE +ALD ++ + + ++ I+I Sbjct: 472 NLSGGQRQRIAIARAIL----KNAPILILDEATSALDNESEHFIQKAFDEAMQNRTTIVI 527 Query: 378 SLRNNMFELADRLV 337 + R + E ADR+V Sbjct: 528 AHRLSTIENADRIV 541
>CYAB_BORPE (P18770) Cyclolysin secretion/processing ATP-binding protein cyaB| (EC 3.4.22.-) Length = 712 Score = 34.7 bits (78), Expect = 0.26 Identities = 25/78 (32%), Positives = 43/78 (55%) Frame = -1 Query: 570 KNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQ 391 +N LSGG++ + + AL H +P L ++DE +ALD+++ I+ ++D Sbjct: 604 ENGVGLSGGQR--QRIGIARALIH-RPRVL-ILDEATSALDYESEHIIQRNMRDICDGRT 659 Query: 390 FIIISLRNNMFELADRLV 337 III+ R + ADR+V Sbjct: 660 VIIIAHRLSAVRCADRIV 677
>Y888_HELPY (O05732) Probable iron chelatin transport ATP-binding protein| HP0888 Length = 255 Score = 34.7 bits (78), Expect = 0.26 Identities = 20/64 (31%), Positives = 35/64 (54%) Frame = -1 Query: 570 KNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQ 391 + I +LSGG++ + LA + TPL ++DE +ALD KN ++ +KD K + Sbjct: 135 QGINDLSGGQRQMVLLARSLL----QRTPLLLLDEPTSALDLKNQALFFDAIKDEMKKRE 190 Query: 390 FIII 379 ++ Sbjct: 191 LSVL 194
>Y888_HELPJ (Q9ZKW3) Probable iron chelatin transport ATP-binding protein| jhp_0821 Length = 255 Score = 34.7 bits (78), Expect = 0.26 Identities = 20/64 (31%), Positives = 35/64 (54%) Frame = -1 Query: 570 KNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQ 391 + I +LSGG++ + LA + TPL ++DE +ALD KN ++ +KD K + Sbjct: 135 QGINDLSGGQRQMVLLARSLL----QRTPLLLLDEPTSALDLKNQALFFDAIKDEMKKRE 190 Query: 390 FIII 379 ++ Sbjct: 191 LSVL 194
>MSBA_PASMU (Q9CMG7) Lipid A export ATP-binding/permease protein msbA| Length = 582 Score = 34.3 bits (77), Expect = 0.34 Identities = 24/80 (30%), Positives = 45/80 (56%) Frame = -1 Query: 570 KNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQ 391 +N NLSGG++ LA+ AL + +P+ ++DE +ALD ++ + ++ K+ Sbjct: 476 ENGVNLSGGQR--QRLAIARAL--LRNSPVLILDEATSALDTESERSIQLALEKLQKERT 531 Query: 390 FIIISLRNNMFELADRLVGI 331 I+I+ R + E AD ++ I Sbjct: 532 VIVIAHRLSTIENADEILVI 551
>RAD50_HALVO (P62133) DNA double-strand break repair rad50 ATPase| Length = 893 Score = 34.3 bits (77), Expect = 0.34 Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 10/94 (10%) Frame = -1 Query: 555 LSGGEKTLSSLALVFALHHY--------KPTPLYVMDEIDAALDFKNVSIVGHYVKDRTK 400 LSGGE+ L +L+L A++ P P ++DE LD +VS + V+D Sbjct: 783 LSGGERALFNLSLRCAIYRLLAEGIDGAAPLPPLILDEPTVFLDGGHVSRLVDLVEDMQS 842 Query: 399 DA--QFIIISLRNNMFELADRLVGIYKTDNCTKS 304 Q +I+S ++ AD LV + K +S Sbjct: 843 RGVKQILIVSHDEDLVGAADDLVRVEKNPTTNRS 876
>RECN_HAEIN (P44496) DNA repair protein recN (Recombination protein N)| Length = 558 Score = 34.3 bits (77), Expect = 0.34 Identities = 16/59 (27%), Positives = 29/59 (49%) Frame = -1 Query: 552 SGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIIS 376 SGGE + SLA+ P + DE+D + K S+VG ++ ++ Q + ++ Sbjct: 435 SGGELSRISLAIQVLTSDQSAIPTLIFDEVDVGISGKTASVVGKLLRQLSERCQVLCVT 493
>RAD50_THEVO (P58302) DNA double-strand break repair rad50 ATPase| Length = 895 Score = 34.3 bits (77), Expect = 0.34 Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 6/88 (6%) Frame = -1 Query: 570 KNIANLSGGEKTLSSLALVFALHHY--KPTPLYVMDEIDAALDFKN----VSIVGHYVKD 409 + I +LSGGE+ + AL A+ + K L VMDE A LD +I+ + +KD Sbjct: 797 EGIDSLSGGERMAVAFALRVAIAQFLNKDVSLLVMDEPTAFLDEDRRSDLANIIEYSLKD 856 Query: 408 RTKDAQFIIISLRNNMFELADRLVGIYK 325 + Q I+IS + +D + + K Sbjct: 857 SSGIPQVIMISHHRELLSASDLALEVKK 884
>CBIO2_CLOAB (Q97EK8) Cobalt import ATP-binding protein cbiO 2| Length = 281 Score = 33.9 bits (76), Expect = 0.44 Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 2/75 (2%) Frame = -1 Query: 555 LSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIIS 376 LSGG+K ++A V A+H V DE A LD K V + + D K++ II Sbjct: 146 LSGGQKQRVAIAGVLAMH----PKCIVFDESTAMLDPKGREEVVNTIMDLNKNSHITIIL 201 Query: 375 LRNNMFEL--ADRLV 337 + + M E ADR+V Sbjct: 202 ITHYMEEAINADRIV 216
>MSBA_VIBVY (Q7MJ07) Lipid A export ATP-binding/permease protein msbA| Length = 583 Score = 33.9 bits (76), Expect = 0.44 Identities = 20/80 (25%), Positives = 44/80 (55%) Frame = -1 Query: 570 KNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQ 391 +N A+LSGG++ ++A + P+ ++DE +ALD ++ + + + K+ Sbjct: 476 ENGASLSGGQRQRVAIARALL----RDAPVLILDEATSALDTESERAIQSALDELQKNKT 531 Query: 390 FIIISLRNNMFELADRLVGI 331 ++I+ R + E AD+++ I Sbjct: 532 VLVIAHRLSTIEKADQILVI 551
>MSBA_VIBVU (Q8DAV2) Lipid A export ATP-binding/permease protein msbA| Length = 583 Score = 33.9 bits (76), Expect = 0.44 Identities = 20/80 (25%), Positives = 44/80 (55%) Frame = -1 Query: 570 KNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQ 391 +N A+LSGG++ ++A + P+ ++DE +ALD ++ + + + K+ Sbjct: 476 ENGASLSGGQRQRVAIARALL----RDAPVLILDEATSALDTESERAIQSALDELQKNKT 531 Query: 390 FIIISLRNNMFELADRLVGI 331 ++I+ R + E AD+++ I Sbjct: 532 VLVIAHRLSTIEKADQILVI 551
>RAD50_HALSA (Q9HRW3) DNA double-strand break repair rad50 ATPase| Length = 883 Score = 33.5 bits (75), Expect = 0.58 Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 10/101 (9%) Frame = -1 Query: 561 ANLSGGEKTLSSLALVFALHHY--------KPTPLYVMDEIDAALDFKNVSIVGHYVKD- 409 A LSGGE+ L +L+L A++ P P ++DE LD +VS + V+ Sbjct: 780 AQLSGGERALFNLSLRTAVYRLLAEGIEGDAPLPPLILDEPTVFLDSGHVSQLVELVESM 839 Query: 408 -RTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITIDP 289 R Q +++S + + AD +V + K +S P Sbjct: 840 RRLGVEQIVVVSHDDELVAAADDVVRVAKDATSNRSRVSTP 880
>MSBA_BORPE (Q7VWD8) Lipid A export ATP-binding/permease protein msbA| Length = 623 Score = 33.5 bits (75), Expect = 0.58 Identities = 26/94 (27%), Positives = 49/94 (52%) Frame = -1 Query: 618 FSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKN 439 F +G+ + P +N A LSGG++ LA+ AL K P+ ++DE +ALD ++ Sbjct: 502 FVDGLPLGIHTPVG--QNAARLSGGQR--QRLAIARAL--IKNAPVLILDEATSALDNES 555 Query: 438 VSIVGHYVKDRTKDAQFIIISLRNNMFELADRLV 337 V ++ + ++I+ R + + ADR++ Sbjct: 556 ERQVQASLERLMRGRTTLVIAHRLSTVQNADRII 589
>MSBA_BORPA (Q7W9N7) Lipid A export ATP-binding/permease protein msbA| Length = 623 Score = 33.5 bits (75), Expect = 0.58 Identities = 26/94 (27%), Positives = 49/94 (52%) Frame = -1 Query: 618 FSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKN 439 F +G+ + P +N A LSGG++ LA+ AL K P+ ++DE +ALD ++ Sbjct: 502 FVDGLPLGIHTPVG--QNAARLSGGQR--QRLAIARAL--IKNAPVLILDEATSALDNES 555 Query: 438 VSIVGHYVKDRTKDAQFIIISLRNNMFELADRLV 337 V ++ + ++I+ R + + ADR++ Sbjct: 556 ERQVQASLERLMRGRTTLVIAHRLSTVQNADRII 589
>MSBA_BORBR (Q7WH20) Lipid A export ATP-binding/permease protein msbA| Length = 623 Score = 33.5 bits (75), Expect = 0.58 Identities = 26/94 (27%), Positives = 49/94 (52%) Frame = -1 Query: 618 FSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKN 439 F +G+ + P +N A LSGG++ LA+ AL K P+ ++DE +ALD ++ Sbjct: 502 FVDGLPLGIHTPVG--QNAARLSGGQR--QRLAIARAL--IKNAPVLILDEATSALDNES 555 Query: 438 VSIVGHYVKDRTKDAQFIIISLRNNMFELADRLV 337 V ++ + ++I+ R + + ADR++ Sbjct: 556 ERQVQASLERLMRGRTTLVIAHRLSTVQNADRII 589
>CBIO1_PYRFU (Q8U4L3) Putative cobalt import ATP-binding protein cbiO 1| Length = 260 Score = 33.5 bits (75), Expect = 0.58 Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 3/81 (3%) Frame = -1 Query: 570 KNIANLSGGEKTLSSLALVFALHHYKPTPLY-VMDEIDAALDFKNVSIVGHYVKDRTKDA 394 KN LSGGEK ++A + A++ P Y V+DE LD + V + + +++ K+ Sbjct: 130 KNPFKLSGGEKQRLAIACILAMN-----PKYLVLDEPTTGLDERGVGALKNIIEELRKEG 184 Query: 393 QFIIISLRNN--MFELADRLV 337 + +I + + E+AD+++ Sbjct: 185 KSFVIVTHDMDLVLEVADKVL 205
>CBIO1_TREDE (Q73R11) Putative cobalt import ATP-binding protein cbiO 1| Length = 489 Score = 33.1 bits (74), Expect = 0.76 Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 2/80 (2%) Frame = -1 Query: 570 KNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQ 391 ++I LSGGEK + A V+A ++V+DE + +D+ ++ + +K + Sbjct: 137 RSIFELSGGEKQKIAFASVYAA----APDIFVLDEPSSNMDYHSIKELSELIKKIKLQGK 192 Query: 390 FIIISLRN--NMFELADRLV 337 III+ + ++ADR++ Sbjct: 193 TIIIAEHRIWYLMDIADRVI 212
>SMC5_SCHPO (O13710) Structural maintenance of chromosome 5 (DNA repair protein| spr18) (SMC partner of rad18) Length = 1065 Score = 33.1 bits (74), Expect = 0.76 Identities = 15/62 (24%), Positives = 36/62 (58%), Gaps = 3/62 (4%) Frame = -1 Query: 552 SGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKD---AQFII 382 SGGE+++S++ + +L P ++DEI+ +D +N +V ++ + D +Q+ + Sbjct: 956 SGGERSVSTIMYLLSLQGLAIAPFRIVDEINQGMDPRNERVVHRHIVNSVCDNAVSQYFL 1015 Query: 381 IS 376 ++ Sbjct: 1016 VT 1017
>Y1272_HAEIN (Q57243) Hypothetical ABC transporter ATP-binding protein HI1272| Length = 263 Score = 33.1 bits (74), Expect = 0.76 Identities = 24/63 (38%), Positives = 31/63 (49%) Frame = -1 Query: 555 LSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIIS 376 LSGGEK L +A A + L +MDE ++LDF N V +K K +IIS Sbjct: 148 LSGGEKQLVLIARAIA----QQAKLLIMDEPTSSLDFGNQIRVLEKIKQLQKQNIALIIS 203 Query: 375 LRN 367 N Sbjct: 204 THN 206
>MSBA_ERWCT (Q6D437) Lipid A export ATP-binding/permease protein msbA| Length = 582 Score = 32.7 bits (73), Expect = 0.99 Identities = 21/78 (26%), Positives = 43/78 (55%) Frame = -1 Query: 570 KNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQ 391 +N LSGG++ +A+ AL + +P+ ++DE +ALD ++ + + + KD Sbjct: 476 ENGVMLSGGQR--QRIAIARAL--LRDSPILILDEATSALDTESERAIQAALDELQKDRT 531 Query: 390 FIIISLRNNMFELADRLV 337 ++I+ R + E AD ++ Sbjct: 532 ALVIAHRLSTIEKADEIL 549
>CBIO3_BACSU (O34362) Putative cobalt import ATP-binding protein cbiO 3| Length = 490 Score = 32.7 bits (73), Expect = 0.99 Identities = 21/74 (28%), Positives = 38/74 (51%) Frame = -1 Query: 570 KNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQ 391 K I+ LSGG+K +LA + A+ L ++DE + LD + H +KD ++ Sbjct: 144 KMISTLSGGQKQKVALACILAME----PELIILDEPTSLLDPFSAREFVHLMKDLQREKG 199 Query: 390 FIIISLRNNMFELA 349 F ++ + + + E A Sbjct: 200 FSLLVIEHQLDEWA 213
>MSBA_HAEDU (Q7VL52) Lipid A export ATP-binding/permease protein msbA| Length = 582 Score = 32.3 bits (72), Expect = 1.3 Identities = 23/78 (29%), Positives = 43/78 (55%) Frame = -1 Query: 570 KNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQ 391 +N A+LSGG++ LA+ AL + P+ V+DE +ALD ++ + + K+ Sbjct: 476 ENGASLSGGQR--QRLAIARAL--LRNAPVLVLDEATSALDTESELAIQSALAALQKNKT 531 Query: 390 FIIISLRNNMFELADRLV 337 ++I+ R + E AD ++ Sbjct: 532 VLVIAHRLSTIEKADEIL 549
>YBBL_ECOLI (P77279) Hypothetical ABC transporter ATP-binding protein ybbL| Length = 225 Score = 32.3 bits (72), Expect = 1.3 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 2/80 (2%) Frame = -1 Query: 570 KNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQ 391 KNIA LSGGEK SL + P L ++DEI +ALD N V + ++ Sbjct: 133 KNIAELSGGEKQRISLIRNL---QFMPKVL-LLDEITSALDESNKHNVNEMIHRYVREQN 188 Query: 390 FIIISLRNNMFEL--ADRLV 337 ++ + ++ E+ AD+++ Sbjct: 189 IAVLWVTHDKDEINHADKVI 208
>LKTB_ACTAC (P23702) Leukotoxin translocation ATP-binding protein lktB (EC| 3.6.3.43) Length = 707 Score = 32.0 bits (71), Expect = 1.7 Identities = 19/75 (25%), Positives = 41/75 (54%) Frame = -1 Query: 561 ANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFII 382 A LSGG++ ++A + + + DE +ALD+++ +I+ H + ++ +I Sbjct: 604 AGLSGGQRQRIAIARALVNN----PRILIFDEATSALDYESENIIMHNMHKICQNRTVLI 659 Query: 381 ISLRNNMFELADRLV 337 I+ R + + ADR++ Sbjct: 660 IAHRLSTVKNADRII 674
>MSBA_XANCP (Q8P8W4) Lipid A export ATP-binding/permease protein msbA| Length = 589 Score = 32.0 bits (71), Expect = 1.7 Identities = 22/73 (30%), Positives = 40/73 (54%) Frame = -1 Query: 555 LSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIIS 376 LSGG++ LA+ A+ K P+ ++DE AALD ++ +V + D ++I+ Sbjct: 485 LSGGQR--QRLAIARAM--LKDAPILILDEATAALDNESERLVQDALHKLMPDRTTLVIA 540 Query: 375 LRNNMFELADRLV 337 R + E AD+++ Sbjct: 541 HRLSTIEHADQVL 553
>RAD50_THEAC (Q9HLR8) DNA double-strand break repair rad50 ATPase| Length = 896 Score = 32.0 bits (71), Expect = 1.7 Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 6/88 (6%) Frame = -1 Query: 570 KNIANLSGGEKTLSSLALVFALHHY--KPTPLYVMDEIDAALDFKN----VSIVGHYVKD 409 + I +LSGGEKT + A+ A+ + L ++DE A LD + I+ + +KD Sbjct: 798 EGIDSLSGGEKTAVAFAIRVAVAQFLNADLSLLILDEPTAFLDEERRNSLSDIIEYTLKD 857 Query: 408 RTKDAQFIIISLRNNMFELADRLVGIYK 325 + Q IIIS + A+ + + K Sbjct: 858 SSVIPQVIIISHHRELLASANVAIEVKK 885
>MSBA_SHIFL (Q83LP0) Lipid A export ATP-binding/permease protein msbA| Length = 582 Score = 31.6 bits (70), Expect = 2.2 Identities = 20/73 (27%), Positives = 41/73 (56%) Frame = -1 Query: 555 LSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIIS 376 LSGG++ +A+ AL + +P+ ++DE +ALD ++ + + + K+ ++I+ Sbjct: 481 LSGGQR--QRIAIARAL--LRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIA 536 Query: 375 LRNNMFELADRLV 337 R + E AD +V Sbjct: 537 HRLSTIEKADEIV 549
>MSBA_SALTY (P63359) Lipid A export ATP-binding/permease protein msbA| Length = 582 Score = 31.6 bits (70), Expect = 2.2 Identities = 20/73 (27%), Positives = 41/73 (56%) Frame = -1 Query: 555 LSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIIS 376 LSGG++ +A+ AL + +P+ ++DE +ALD ++ + + + K+ ++I+ Sbjct: 481 LSGGQR--QRIAIARAL--LRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIA 536 Query: 375 LRNNMFELADRLV 337 R + E AD +V Sbjct: 537 HRLSTIEQADEIV 549
>MSBA_SALTI (P63360) Lipid A export ATP-binding/permease protein msbA| Length = 582 Score = 31.6 bits (70), Expect = 2.2 Identities = 20/73 (27%), Positives = 41/73 (56%) Frame = -1 Query: 555 LSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIIS 376 LSGG++ +A+ AL + +P+ ++DE +ALD ++ + + + K+ ++I+ Sbjct: 481 LSGGQR--QRIAIARAL--LRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIA 536 Query: 375 LRNNMFELADRLV 337 R + E AD +V Sbjct: 537 HRLSTIEQADEIV 549
>MSBA_ECOLI (P60752) Lipid A export ATP-binding/permease protein msbA| Length = 582 Score = 31.6 bits (70), Expect = 2.2 Identities = 20/73 (27%), Positives = 41/73 (56%) Frame = -1 Query: 555 LSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIIS 376 LSGG++ +A+ AL + +P+ ++DE +ALD ++ + + + K+ ++I+ Sbjct: 481 LSGGQR--QRIAIARAL--LRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIA 536 Query: 375 LRNNMFELADRLV 337 R + E AD +V Sbjct: 537 HRLSTIEKADEIV 549
>MSBA_ECOL6 (Q8FJB1) Lipid A export ATP-binding/permease protein msbA| Length = 582 Score = 31.6 bits (70), Expect = 2.2 Identities = 20/73 (27%), Positives = 41/73 (56%) Frame = -1 Query: 555 LSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIIS 376 LSGG++ +A+ AL + +P+ ++DE +ALD ++ + + + K+ ++I+ Sbjct: 481 LSGGQR--QRIAIARAL--LRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIA 536 Query: 375 LRNNMFELADRLV 337 R + E AD +V Sbjct: 537 HRLSTIEKADEIV 549
>MSBA_ECO57 (P60753) Lipid A export ATP-binding/permease protein msbA| Length = 582 Score = 31.6 bits (70), Expect = 2.2 Identities = 20/73 (27%), Positives = 41/73 (56%) Frame = -1 Query: 555 LSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIIS 376 LSGG++ +A+ AL + +P+ ++DE +ALD ++ + + + K+ ++I+ Sbjct: 481 LSGGQR--QRIAIARAL--LRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIA 536 Query: 375 LRNNMFELADRLV 337 R + E AD +V Sbjct: 537 HRLSTIEKADEIV 549
>CBIO2_PYRHO (O59479) Putative cobalt import ATP-binding protein cbiO 2| Length = 284 Score = 31.6 bits (70), Expect = 2.2 Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 3/77 (3%) Frame = -1 Query: 558 NLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 379 NLSGGEK ++A V + KP L V+DE + LD V +K K+ + II Sbjct: 143 NLSGGEKQRLAIASVLVM---KPKVL-VLDEPTSQLDPLGREEVLGLIKLLNKEEKITII 198 Query: 378 SLRNN---MFELADRLV 337 + +N + E ADR+V Sbjct: 199 LVEHNTDFLLEHADRIV 215
>TARA_MOUSE (Q99KW3) TRIO and F-actin-binding protein (Protein Tara)| (Trio-associated repeat on actin) Length = 2014 Score = 31.6 bits (70), Expect = 2.2 Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 17/113 (15%) Frame = -1 Query: 582 KKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDR- 406 KK W +I + G K + +L +Y+ + DE+D +D ++ + V Y R Sbjct: 1443 KKGWMSILDEPGEWKKHWFVLTDSSLKYYRDSTAEEADELDGEIDLRSCTDVTEYAVQRN 1502 Query: 405 ------TKDAQFIIIS----LRNNMFELADRLV------GIYKTDNCTKSITI 295 TKDA + + + +R N E + V + K +C K T+ Sbjct: 1503 YGFQIHTKDAVYTLSAMTSGIRRNWIEALRKTVRPTSAPDVTKLSDCNKENTL 1555
>MSBA_XANAC (Q8PKS5) Lipid A export ATP-binding/permease protein msbA| Length = 589 Score = 31.6 bits (70), Expect = 2.2 Identities = 22/73 (30%), Positives = 40/73 (54%) Frame = -1 Query: 555 LSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIIS 376 LSGG++ LA+ A+ K P+ ++DE AALD ++ +V + D ++I+ Sbjct: 485 LSGGQR--QRLAIARAM--LKDAPVLILDEATAALDNESERLVQDALHKLMPDRTTLVIA 540 Query: 375 LRNNMFELADRLV 337 R + E AD+++ Sbjct: 541 HRLSTIEHADQVL 553
>Y068_CHLTR (O84071) Probable metal transport system ATP-binding protein CT_068| Length = 259 Score = 31.6 bits (70), Expect = 2.2 Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 2/92 (2%) Frame = -1 Query: 570 KNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQ 391 + I LSGG++ + LA + LY+MDE+ +A+D + +V +++ + + Sbjct: 137 RQIGKLSGGQQQRAFLARSLM----QKADLYLMDELFSAIDMASYQMVVDVLQELKSEGK 192 Query: 390 FIIISLR--NNMFELADRLVGIYKTDNCTKSI 301 I++ +N+ +L D ++ + K C+ S+ Sbjct: 193 TIVVIHHDLSNVRKLFDHVILLNKHLVCSGSV 224
>Y433_MYCPN (P75355) Hypothetical ABC transporter ATP-binding protein MG304| homolog (A05_orf270L) Length = 270 Score = 31.6 bits (70), Expect = 2.2 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 3/88 (3%) Frame = -1 Query: 579 KSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTK 400 K + ++ LS GEK + A + A+ KP LY++DE + LD K S + ++ K Sbjct: 125 KQFTPLSKLSFGEKQRAVFACLLAV---KPE-LYLLDEAFSMLDGKLASKLKRFIFKVIK 180 Query: 399 DAQFIIISLR---NNMFELADRLVGIYK 325 + Q +I++ N++F LAD ++ + K Sbjct: 181 EQQKTVINVTHDFNDLF-LADEIIFLSK 207
>PSTB1_THETN (Q8RCU0) Phosphate import ATP-binding protein pstB 1 (EC 3.6.3.27)| (Phosphate-transporting ATPase 1) (ABC phosphate transporter 1) Length = 239 Score = 31.6 bits (70), Expect = 2.2 Identities = 19/69 (27%), Positives = 35/69 (50%) Frame = -1 Query: 573 WKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDA 394 +K++ NLSGGE S+A A + ++DE ++LD + SI+ +K ++ Sbjct: 125 FKDVNNLSGGEAQRVSIARALA----NSPEVLLLDEPTSSLDPTSTSIIEELIKRLNREG 180 Query: 393 QFIIISLRN 367 +I+ N Sbjct: 181 IMVILVTHN 189
>YWJA_BACSU (P45861) Hypothetical ABC transporter ATP-binding protein ywjA| Length = 575 Score = 31.6 bits (70), Expect = 2.2 Identities = 20/73 (27%), Positives = 40/73 (54%) Frame = -1 Query: 555 LSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIIS 376 LSGG+K S+A +F K + ++DE +ALD + + + +++ ++ ++I+ Sbjct: 470 LSGGQKQRLSIARMFL----KNPSILILDEATSALDTETEAAIQKALQELSEGRTTLVIA 525 Query: 375 LRNNMFELADRLV 337 R + ADR+V Sbjct: 526 HRLATIKDADRIV 538
>CCA_SALTY (Q8ZLY4) Multifunctional CCA protein [Includes: CCA-adding enzyme| (EC 2.7.7.25) (EC 2.7.7.21) (tRNA nucleotidyltransferase) (tRNA adenylyl-/cytidylyl-transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT); 2'-nucleotidase (EC 3.1.3.-); 2',3'-cycli Length = 413 Score = 31.2 bits (69), Expect = 2.9 Identities = 15/54 (27%), Positives = 26/54 (48%) Frame = +3 Query: 198 WMKFHRADQVTFMLSAKLRGVVGFSSRQSFRGRWLYSLCNYQSCRCQPAYQLIQ 359 W K R +Q+ A +RG GF + +GRWL +Q + P ++++ Sbjct: 329 WRKPQRVEQIALTSEADVRGRTGFEASDYPQGRWLREA--WQVAQAVPTKEVVE 380
>CCA_SALTI (Q8Z3M9) Multifunctional CCA protein [Includes: CCA-adding enzyme| (EC 2.7.7.25) (EC 2.7.7.21) (tRNA nucleotidyltransferase) (tRNA adenylyl-/cytidylyl-transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT); 2'-nucleotidase (EC 3.1.3.-); 2',3'-cycli Length = 413 Score = 31.2 bits (69), Expect = 2.9 Identities = 15/54 (27%), Positives = 26/54 (48%) Frame = +3 Query: 198 WMKFHRADQVTFMLSAKLRGVVGFSSRQSFRGRWLYSLCNYQSCRCQPAYQLIQ 359 W K R +Q+ A +RG GF + +GRWL +Q + P ++++ Sbjct: 329 WRKPQRVEQIALTSEADVRGRTGFEASDYPQGRWLREA--WQVAQAVPTKEVVE 380
>CCA_SALPA (Q5PC82) Multifunctional CCA protein [Includes: CCA-adding enzyme| (EC 2.7.7.25) (EC 2.7.7.21) (tRNA nucleotidyltransferase) (tRNA adenylyl-/cytidylyl-transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT); 2'-nucleotidase (EC 3.1.3.-); 2',3'-cycli Length = 413 Score = 31.2 bits (69), Expect = 2.9 Identities = 15/54 (27%), Positives = 26/54 (48%) Frame = +3 Query: 198 WMKFHRADQVTFMLSAKLRGVVGFSSRQSFRGRWLYSLCNYQSCRCQPAYQLIQ 359 W K R +Q+ A +RG GF + +GRWL +Q + P ++++ Sbjct: 329 WRKPQRVEQIALTSEADVRGRTGFEASDYPQGRWLREA--WQVAQAVPTKEVVE 380
>CCA_SALCH (Q57JQ5) Multifunctional CCA protein [Includes: CCA-adding enzyme| (EC 2.7.7.25) (EC 2.7.7.21) (tRNA nucleotidyltransferase) (tRNA adenylyl-/cytidylyl-transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT); 2'-nucleotidase (EC 3.1.3.-); 2',3'-cycli Length = 413 Score = 31.2 bits (69), Expect = 2.9 Identities = 15/54 (27%), Positives = 26/54 (48%) Frame = +3 Query: 198 WMKFHRADQVTFMLSAKLRGVVGFSSRQSFRGRWLYSLCNYQSCRCQPAYQLIQ 359 W K R +Q+ A +RG GF + +GRWL +Q + P ++++ Sbjct: 329 WRKPQRVEQIALTSEADVRGRTGFEASDYPQGRWLREA--WQVAQAVPTKEVVE 380
>CBIO_ENTFC (Q8VNL9) Cobalt import ATP-binding protein cbiO| Length = 279 Score = 31.2 bits (69), Expect = 2.9 Identities = 23/83 (27%), Positives = 44/83 (53%) Frame = -1 Query: 594 VRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYV 415 VR + + + A LSGG+K ++A V AL + ++DE + LD + V + Sbjct: 128 VRMAEFASREPARLSGGQKQRVAIAGVVALR----PDIIILDEATSMLDPEGREEVISTI 183 Query: 414 KDRTKDAQFIIISLRNNMFELAD 346 K +++Q +IS+ +++ E A+ Sbjct: 184 KKIKEESQLTVISITHDIDEAAN 206
>MSBA_VIBCH (Q9KQW9) Lipid A export ATP-binding/permease protein msbA| Length = 582 Score = 31.2 bits (69), Expect = 2.9 Identities = 18/78 (23%), Positives = 41/78 (52%) Frame = -1 Query: 570 KNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQ 391 +N +LSGG++ ++A + P+ ++DE +ALD ++ + + + K+ Sbjct: 476 ENGTSLSGGQRQRVAIARALL----RDAPVLILDEATSALDTESERAIQAALDELQKNKT 531 Query: 390 FIIISLRNNMFELADRLV 337 ++I+ R + E AD ++ Sbjct: 532 VLVIAHRLSTIEQADEIL 549
>RAD50_METJA (Q58718) DNA double-strand break repair rad50 ATPase| Length = 1005 Score = 31.2 bits (69), Expect = 2.9 Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 3/89 (3%) Frame = -1 Query: 564 IANLSGGEKTLSSLALVFALHHY---KPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDA 394 I NLSGGE+ +L+L A+ + ++DE LD + + + Sbjct: 912 IDNLSGGEQIAVALSLRLAIANALIGNRVECIILDEPTVYLDENRRAKLAEIFRKVKSIP 971 Query: 393 QFIIISLRNNMFELADRLVGIYKTDNCTK 307 Q III+ + ++AD ++ + K N +K Sbjct: 972 QMIIITHHRELEDVADVIINVKKDGNVSK 1000
>CBIO2_PYRAB (Q9V1Q4) Putative cobalt import ATP-binding protein cbiO 2| Length = 280 Score = 31.2 bits (69), Expect = 2.9 Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 3/77 (3%) Frame = -1 Query: 558 NLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 379 NLSGGEK ++A V + KP L V+DE + LD V V+ K+ + II Sbjct: 143 NLSGGEKQRLAIASVLVM---KPKVL-VLDEPTSQLDPLGREEVLSLVRLLNKEEKITII 198 Query: 378 SLRNN---MFELADRLV 337 + +N + E ADR+V Sbjct: 199 LVEHNTDFLLEHADRIV 215
>CCA_SHIFL (Q821A6) Multifunctional CCA protein [Includes: CCA-adding enzyme| (EC 2.7.7.25) (EC 2.7.7.21) (tRNA nucleotidyltransferase) (tRNA adenylyl-/cytidylyl-transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT); 2'-nucleotidase (EC 3.1.3.-); 2',3'-cycli Length = 412 Score = 31.2 bits (69), Expect = 2.9 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +3 Query: 198 WMKFHRADQVTFMLSAKLRGVVGFSSRQSFRGRWL 302 W K R +Q+ A +RG GF S +GRWL Sbjct: 329 WRKPQRVEQLALTSEADVRGRTGFESADYPQGRWL 363
>CCA_ECOLI (P06961) Multifunctional CCA protein [Includes: CCA-adding enzyme| (EC 2.7.7.25) (EC 2.7.7.21) (tRNA nucleotidyltransferase) (tRNA adenylyl-/cytidylyl-transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT); 2'-nucleotidase (EC 3.1.3.-); 2',3'-cycli Length = 412 Score = 31.2 bits (69), Expect = 2.9 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +3 Query: 198 WMKFHRADQVTFMLSAKLRGVVGFSSRQSFRGRWL 302 W K R +Q+ A +RG GF S +GRWL Sbjct: 329 WRKPQRVEQLALTSEADVRGRTGFESADYPQGRWL 363
>CCA_ECOL6 (Q8CXX6) Multifunctional CCA protein [Includes: CCA-adding enzyme| (EC 2.7.7.25) (EC 2.7.7.21) (tRNA nucleotidyltransferase) (tRNA adenylyl-/cytidylyl-transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT); 2'-nucleotidase (EC 3.1.3.-); 2',3'-cycli Length = 412 Score = 31.2 bits (69), Expect = 2.9 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +3 Query: 198 WMKFHRADQVTFMLSAKLRGVVGFSSRQSFRGRWL 302 W K R +Q+ A +RG GF S +GRWL Sbjct: 329 WRKPQRVEQLALTSEADVRGRTGFESADYPQGRWL 363
>CCA_ECO57 (Q8XBL4) Multifunctional CCA protein [Includes: CCA-adding enzyme| (EC 2.7.7.25) (EC 2.7.7.21) (tRNA nucleotidyltransferase) (tRNA adenylyl-/cytidylyl-transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT); 2'-nucleotidase (EC 3.1.3.-); 2',3'-cycli Length = 412 Score = 31.2 bits (69), Expect = 2.9 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +3 Query: 198 WMKFHRADQVTFMLSAKLRGVVGFSSRQSFRGRWL 302 W K R +Q+ A +RG GF S +GRWL Sbjct: 329 WRKPQRVEQLALTSEADVRGRTGFESADYPQGRWL 363
>CBIO1_PYRHO (O57872) Putative cobalt import ATP-binding protein cbiO 1| Length = 260 Score = 31.2 bits (69), Expect = 2.9 Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 2/80 (2%) Frame = -1 Query: 570 KNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQ 391 +N LSGGEK ++A + A+ KP L V+DE + LD + + + + +K+ ++ Sbjct: 130 RNPFELSGGEKQRLAIACILAM---KPKYL-VLDEPNTGLDERGLQDLINVIKNLRREGS 185 Query: 390 FIIISLRN--NMFELADRLV 337 II+ + + E+AD+++ Sbjct: 186 SIILVTHDIELVLEVADKVL 205
>RECN_VIBCH (P52118) DNA repair protein recN (Recombination protein N)| Length = 554 Score = 31.2 bits (69), Expect = 2.9 Identities = 15/59 (25%), Positives = 28/59 (47%) Frame = -1 Query: 552 SGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIIS 376 SGGE + SLA+ TP + DE+D + ++VG ++ + Q + ++ Sbjct: 432 SGGELSRMSLAIQVITAQKVDTPSLIFDEVDVGISGPTAAVVGKLLRKLGESTQVLCVT 490
>UUP1_HAEIN (Q57242) ABC transporter ATP-binding protein uup-1| Length = 647 Score = 30.8 bits (68), Expect = 3.7 Identities = 18/60 (30%), Positives = 30/60 (50%) Frame = -1 Query: 588 PPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKD 409 PPK++ + LSGGE+ LA + KP L ++DE LD + + ++ + D Sbjct: 430 PPKRAMTPVKALSGGERNRLLLAKLL----LKPNNLLILDEPTNDLDVETLELLEEILTD 485
>Y1383_MYCBO (P63392) Hypothetical ABC transporter ATP-binding protein Mb1383| Length = 859 Score = 30.8 bits (68), Expect = 3.7 Identities = 20/75 (26%), Positives = 38/75 (50%) Frame = -1 Query: 561 ANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFII 382 + LSGGE+ ++A TP+ ++DE A D ++ +V + T+D ++ Sbjct: 744 SGLSGGERQRLTIARAIL----GDTPVLILDEATAFADPESEYLVQQALNRLTRDRTVLV 799 Query: 381 ISLRNNMFELADRLV 337 I+ R + AD++V Sbjct: 800 IAHRLHTITRADQIV 814
>Y1348_MYCTU (P63391) Hypothetical ABC transporter ATP-binding protein| Rv1348/MT1390 Length = 859 Score = 30.8 bits (68), Expect = 3.7 Identities = 20/75 (26%), Positives = 38/75 (50%) Frame = -1 Query: 561 ANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFII 382 + LSGGE+ ++A TP+ ++DE A D ++ +V + T+D ++ Sbjct: 744 SGLSGGERQRLTIARAIL----GDTPVLILDEATAFADPESEYLVQQALNRLTRDRTVLV 799 Query: 381 ISLRNNMFELADRLV 337 I+ R + AD++V Sbjct: 800 IAHRLHTITRADQIV 814
>MSBA_YERPS (Q66CI3) Lipid A export ATP-binding/permease protein msbA| Length = 582 Score = 30.8 bits (68), Expect = 3.7 Identities = 21/75 (28%), Positives = 41/75 (54%) Frame = -1 Query: 555 LSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIIS 376 LSGG++ +A+ AL + P+ ++DE +ALD ++ + + + K+ ++I+ Sbjct: 481 LSGGQR--QRIAIARAL--LRNCPILILDEATSALDTESERAIQAALDELQKNRTSLVIA 536 Query: 375 LRNNMFELADRLVGI 331 R + E AD +V I Sbjct: 537 HRLSTIEKADEIVVI 551
>MSBA_YERPE (Q8ZGA9) Lipid A export ATP-binding/permease protein msbA| Length = 582 Score = 30.8 bits (68), Expect = 3.7 Identities = 21/75 (28%), Positives = 41/75 (54%) Frame = -1 Query: 555 LSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIIS 376 LSGG++ +A+ AL + P+ ++DE +ALD ++ + + + K+ ++I+ Sbjct: 481 LSGGQR--QRIAIARAL--LRNCPILILDEATSALDTESERAIQAALDELQKNRTSLVIA 536 Query: 375 LRNNMFELADRLVGI 331 R + E AD +V I Sbjct: 537 HRLSTIEKADEIVVI 551
>RTX1B_ACTPL (P26760) Toxin RTX-I translocation ATP-binding protein (RTX-I toxin| determinant B) (APX-IB) (HLY-IB) (Cytolysin IB) (CLY-IB) Length = 707 Score = 30.8 bits (68), Expect = 3.7 Identities = 21/79 (26%), Positives = 40/79 (50%) Frame = -1 Query: 561 ANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFII 382 A LSGG++ ++A + + + DE +ALD+++ I+ + K II Sbjct: 604 AGLSGGQRQRIAIARALVNN----PKILIFDEATSALDYESEHIIMRNMHQICKGRTVII 659 Query: 381 ISLRNNMFELADRLVGIYK 325 I+ R + + ADR++ + K Sbjct: 660 IAHRLSTVKNADRIIVMEK 678
>ABCB9_HUMAN (Q9NP78) ATP-binding cassette sub-family B member 9 precursor| (ATP-binding cassette transporter 9) (ABC transporter 9 protein) (TAP-like protein) (TAPL) (hABCB9) Length = 766 Score = 30.8 bits (68), Expect = 3.7 Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 4/113 (3%) Frame = -1 Query: 561 ANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFII 382 A LSGG+K ++A + P+ ++DE +ALD ++ ++ + + +I Sbjct: 641 AQLSGGQKQRVAMARALV----RNPPVLILDEATSALDAESEYLIQQAIHGNLQKHTVLI 696 Query: 381 ISLRNNMFELADRLVGIYK----TDNCTKSITIDPGSFAES*NQQLLEASPRA 235 I+ R + E A +V + K + + G +A+ +Q+L P A Sbjct: 697 IAHRLSTVEHAHLIVVLDKGRVVQQGTHQQLLAQGGLYAKLVQRQMLGLQPAA 749
>UUP2_HAEIN (P45167) ABC transporter ATP-binding protein uup-2| Length = 459 Score = 30.8 bits (68), Expect = 3.7 Identities = 18/60 (30%), Positives = 30/60 (50%) Frame = -1 Query: 588 PPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKD 409 PPK++ + LSGGE+ LA + KP L ++DE LD + + ++ + D Sbjct: 242 PPKRAMTPVKALSGGERNRLLLAKLL----LKPNNLLILDEPTNDLDVETLELLEEILTD 297
>BPS2_ACIAM (P32985) Protein bps2| Length = 582 Score = 30.4 bits (67), Expect = 4.9 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%) Frame = -1 Query: 564 IANLSGGEKTLSSLALVF-ALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQF 388 + LS E+T +L LV AL Y TP +++DE D + + Y+ T + Sbjct: 503 LRKLSSSERTTLALILVLTALKSYFKTPFFIVDESFMTFDQRRFDKIVKYLNSIT---DY 559 Query: 387 IIISLRNNMFEL 352 +II+ + EL Sbjct: 560 VIITKSDENIEL 571
>Y1384_MYCBO (P63394) Hypothetical ABC transporter ATP-binding protein Mb1384| Length = 579 Score = 30.4 bits (67), Expect = 4.9 Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 4/103 (3%) Frame = -1 Query: 555 LSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIIS 376 LSGGE+ S+A K P+ ++DE +ALD +N + V + + +I++ Sbjct: 470 LSGGERQRVSIARALL----KAAPVLLVDEATSALDAENEAAVVDALAADPRSRTRVIVA 525 Query: 375 LRNNMFELADRLV----GIYKTDNCTKSITIDPGSFAES*NQQ 259 R ADR++ G D + G F++ QQ Sbjct: 526 HRLASIRHADRVLFVDDGRVVEDGSISELLTAGGRFSQFWRQQ 568
>Y1349_MYCTU (P63393) Hypothetical ABC transporter ATP-binding protein| Rv1349/MT1392 Length = 579 Score = 30.4 bits (67), Expect = 4.9 Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 4/103 (3%) Frame = -1 Query: 555 LSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIIS 376 LSGGE+ S+A K P+ ++DE +ALD +N + V + + +I++ Sbjct: 470 LSGGERQRVSIARALL----KAAPVLLVDEATSALDAENEAAVVDALAADPRSRTRVIVA 525 Query: 375 LRNNMFELADRLV----GIYKTDNCTKSITIDPGSFAES*NQQ 259 R ADR++ G D + G F++ QQ Sbjct: 526 HRLASIRHADRVLFVDDGRVVEDGSISELLTAGGRFSQFWRQQ 568
>HLYB_ECOL6 (Q8FDZ8) Alpha-hemolysin translocation ATP-binding protein hlyB| Length = 707 Score = 30.4 bits (67), Expect = 4.9 Identities = 21/79 (26%), Positives = 40/79 (50%) Frame = -1 Query: 561 ANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFII 382 A LSGG++ ++A + + + DE +ALD+++ I+ + K II Sbjct: 604 AGLSGGQRQRIAIARALVNN----PKILIFDEATSALDYESEHIIMRNMHKICKGRTVII 659 Query: 381 ISLRNNMFELADRLVGIYK 325 I+ R + + ADR++ + K Sbjct: 660 IAHRLSTVKNADRIIVMEK 678
>HLYB3_ECOLI (Q47258) Alpha-hemolysin translocation ATP-binding protein hlyB| Length = 707 Score = 30.4 bits (67), Expect = 4.9 Identities = 21/79 (26%), Positives = 40/79 (50%) Frame = -1 Query: 561 ANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFII 382 A LSGG++ ++A + + + DE +ALD+++ I+ + K II Sbjct: 604 AGLSGGQRQRIAIARALVNN----PKILIFDEATSALDYESEHIIMRNMHKICKGRTVII 659 Query: 381 ISLRNNMFELADRLVGIYK 325 I+ R + + ADR++ + K Sbjct: 660 IAHRLSTVKNADRIIVMEK 678
>RECN_ECOLI (P05824) DNA repair protein recN (Recombination protein N)| Length = 553 Score = 30.4 bits (67), Expect = 4.9 Identities = 14/59 (23%), Positives = 28/59 (47%) Frame = -1 Query: 552 SGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIIS 376 SGGE + +LA+ TP + DE+D + ++VG ++ + Q + ++ Sbjct: 432 SGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQLGESTQVMCVT 490
>RECN_XYLFT (Q87BS5) DNA repair protein recN (Recombination protein N)| Length = 557 Score = 30.4 bits (67), Expect = 4.9 Identities = 20/70 (28%), Positives = 33/70 (47%) Frame = -1 Query: 585 PKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDR 406 P + + IA SGGE + SLA++ A P V DE+D + IVG ++ Sbjct: 423 PPRPLRKIA--SGGELSRVSLAIMVAALGLDTVPTMVFDEVDTGIGGAIADIVGQKLRAL 480 Query: 405 TKDAQFIIIS 376 + Q + ++ Sbjct: 481 GEQHQVLCVT 490
>RECN_XYLFA (Q9PB02) DNA repair protein recN (Recombination protein N)| Length = 557 Score = 30.4 bits (67), Expect = 4.9 Identities = 20/70 (28%), Positives = 33/70 (47%) Frame = -1 Query: 585 PKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDR 406 P + + IA SGGE + SLA++ A P V DE+D + IVG ++ Sbjct: 423 PPRPLRKIA--SGGELSRVSLAIMVAALGLDTVPTMVFDEVDTGIGGAIADIVGQKLRAL 480 Query: 405 TKDAQFIIIS 376 + Q + ++ Sbjct: 481 GEQHQVLCVT 490
>NDVA_RHIME (P18767) Beta-(1-->2)glucan export ATP-binding protein ndvA| Length = 616 Score = 30.4 bits (67), Expect = 4.9 Identities = 22/73 (30%), Positives = 35/73 (47%) Frame = -1 Query: 555 LSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIIS 376 LSGGE+ ++A K P+ V+DE +ALD + + V + KD II+ Sbjct: 503 LSGGERQRVAIARAIL----KNAPILVLDEATSALDVETEARVKDAIDALRKDRTTFIIA 558 Query: 375 LRNNMFELADRLV 337 R + AD ++ Sbjct: 559 HRLSTVREADLVI 571
>CBIO2_METJA (Q58967) Putative cobalt import ATP-binding protein cbiO 2| Length = 278 Score = 30.0 bits (66), Expect = 6.4 Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 1/73 (1%) Frame = -1 Query: 558 NLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 379 NLSGGEK S++ + ++ + +MDE +ALD K+ + + + +K + + +++ Sbjct: 143 NLSGGEKKKVSISCILSVE----PEVILMDEPTSALDPKSRAEIMNLIKSFKECGKTVVL 198 Query: 378 SLRN-NMFELADR 343 + N+ LADR Sbjct: 199 VTHDLNLACLADR 211
>CCMA_XYLFT (Q87BH8) Cytochrome c biogenesis ATP-binding export protein ccmA| (EC 3.6.3.41) (Heme exporter protein A) Length = 215 Score = 30.0 bits (66), Expect = 6.4 Identities = 16/48 (33%), Positives = 28/48 (58%) Frame = -1 Query: 564 IANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGH 421 + LS G+K SLA ++ P PL+++DE A LD + ++++ H Sbjct: 136 VRQLSAGQKKRLSLARLWL----SPAPLWLLDEPYANLDPEGITLLNH 179
>CBIO1_MYCGE (P47425) Cobalt import ATP-binding protein cbiO 1| Length = 274 Score = 30.0 bits (66), Expect = 6.4 Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 2/76 (2%) Frame = -1 Query: 558 NLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII 379 NLSGG+K ++A V AL+ + + DE A LD K + ++ K + +I Sbjct: 141 NLSGGQKQRVAIASVLALN----PAIIIFDESTAMLDPKAKKTIKQFMVKLAKQGK-CVI 195 Query: 378 SLRNNMFEL--ADRLV 337 S+ ++M E+ AD+++ Sbjct: 196 SITHDMEEVTKADKVL 211
>CCMA_VIBCH (Q9KQE3) Cytochrome c biogenesis ATP-binding export protein ccmA| (EC 3.6.3.41) (Heme exporter protein A) Length = 207 Score = 30.0 bits (66), Expect = 6.4 Identities = 17/69 (24%), Positives = 35/69 (50%) Frame = -1 Query: 564 IANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFI 385 +A LS G++ +LA ++ PL+++DE A+D + VS++ + + Sbjct: 128 VAQLSAGQQRRVALARLWL----SKKPLWILDEPLTAIDKQGVSVLEALFLSHAQQGGIV 183 Query: 384 IISLRNNMF 358 I++ +MF Sbjct: 184 ILTTHQDMF 192
>MSBA_PSESM (Q87VF3) Lipid A export ATP-binding/permease protein msbA| Length = 600 Score = 30.0 bits (66), Expect = 6.4 Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 4/77 (5%) Frame = -1 Query: 555 LSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKN----VSIVGHYVKDRTKDAQF 388 LSGG++ LA+ AL K PL ++DE +ALD ++ + + H +K RT Sbjct: 492 LSGGQR--QRLAIARAL--LKNAPLLILDEATSALDTESERHIQAALDHVMKGRTT---- 543 Query: 387 IIISLRNNMFELADRLV 337 ++I+ R + E AD ++ Sbjct: 544 LVIAHRLSTIEKADMIL 560
>HLYBP_ECOLI (P08716) Alpha-hemolysin translocation ATP-binding protein hlyB| Length = 707 Score = 30.0 bits (66), Expect = 6.4 Identities = 20/79 (25%), Positives = 40/79 (50%) Frame = -1 Query: 561 ANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFII 382 A LSGG++ ++A + + + DE +ALD+++ ++ + K II Sbjct: 604 AGLSGGQRQRIAIARALVNN----PKILIFDEATSALDYESEHVIMRNMHKICKGRTVII 659 Query: 381 ISLRNNMFELADRLVGIYK 325 I+ R + + ADR++ + K Sbjct: 660 IAHRLSTVKNADRIIVMEK 678
>HLYBC_ECOLI (P10089) Alpha-hemolysin translocation ATP-binding protein hlyB| Length = 707 Score = 30.0 bits (66), Expect = 6.4 Identities = 20/79 (25%), Positives = 40/79 (50%) Frame = -1 Query: 561 ANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFII 382 A LSGG++ ++A + + + DE +ALD+++ ++ + K II Sbjct: 604 AGLSGGQRQRIAIARALVNN----PKILIFDEATSALDYESEHVIMRNMHKICKGRTVII 659 Query: 381 ISLRNNMFELADRLVGIYK 325 I+ R + + ADR++ + K Sbjct: 660 IAHRLSTVKNADRIIVMEK 678
>CCMA_XYLFA (Q9PAP0) Cytochrome c biogenesis ATP-binding export protein ccmA| (EC 3.6.3.41) (Heme exporter protein A) Length = 223 Score = 30.0 bits (66), Expect = 6.4 Identities = 16/48 (33%), Positives = 28/48 (58%) Frame = -1 Query: 564 IANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGH 421 + LS G+K SLA ++ P PL+++DE A LD + ++++ H Sbjct: 144 VRQLSAGQKKRLSLAQLWL----SPAPLWLLDEPYANLDPEGITLLNH 187
>MSBA_PSEAE (Q9HUG8) Lipid A export ATP-binding/permease protein msbA| Length = 603 Score = 30.0 bits (66), Expect = 6.4 Identities = 22/73 (30%), Positives = 39/73 (53%) Frame = -1 Query: 555 LSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIIS 376 LSGG++ LA+ AL K PL ++DE +ALD ++ + + + K ++I+ Sbjct: 495 LSGGQR--QRLAIARAL--LKDAPLLILDEATSALDTESERHIQAALDEVMKGRTTLVIA 550 Query: 375 LRNNMFELADRLV 337 R + E AD ++ Sbjct: 551 HRLSTIEKADLIL 563
>CCMA_VIBVY (Q7MIR0) Cytochrome c biogenesis ATP-binding export protein ccmA| (EC 3.6.3.41) (Heme exporter protein A) Length = 205 Score = 30.0 bits (66), Expect = 6.4 Identities = 17/75 (22%), Positives = 38/75 (50%) Frame = -1 Query: 564 IANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFI 385 +A LS G++ +LA ++ H L+++DE A+D + V ++ + + + Sbjct: 128 VAQLSAGQQRRVALARLWLSHQI----LWILDEPLTAIDKQGVKVLESLFSNHVDNGGIV 183 Query: 384 IISLRNNMFELADRL 340 I++ +MF + +L Sbjct: 184 ILTTHQDMFADSPKL 198
>CCMA_VIBVU (Q8DB62) Cytochrome c biogenesis ATP-binding export protein ccmA| (EC 3.6.3.41) (Heme exporter protein A) Length = 205 Score = 30.0 bits (66), Expect = 6.4 Identities = 17/75 (22%), Positives = 38/75 (50%) Frame = -1 Query: 564 IANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFI 385 +A LS G++ +LA ++ H L+++DE A+D + V ++ + + + Sbjct: 128 VAQLSAGQQRRVALARLWLSHQI----LWILDEPLTAIDKQGVKVLESLFSNHVDNGGIV 183 Query: 384 IISLRNNMFELADRL 340 I++ +MF + +L Sbjct: 184 ILTTHQDMFTDSPKL 198
>RAD50_SULSO (Q97WH0) DNA double-strand break repair rad50 ATPase| Length = 864 Score = 29.6 bits (65), Expect = 8.3 Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 3/86 (3%) Frame = -1 Query: 564 IANLSGGEKTLSSLALVFALHH--YKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDA- 394 I +LSGGE+ S+AL A+ T +++DE LD + + + ++ + Sbjct: 771 IVSLSGGERIALSIALRLAIAKALMSNTNFFILDEPTIHLDDQRKAYLIEIIRAAKESVP 830 Query: 393 QFIIISLRNNMFELADRLVGIYKTDN 316 Q I+++ + + AD ++ + K N Sbjct: 831 QIIVVTHDEEVVQAADYVIRVEKRGN 856
>EF3_PNECA (P29551) Elongation factor 3 (EF-3)| Length = 1042 Score = 29.6 bits (65), Expect = 8.3 Identities = 21/61 (34%), Positives = 34/61 (55%) Frame = -1 Query: 564 IANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFI 385 I+NLSGG K LALV A+ + + ++DE LD KNV+ + +++ +T I Sbjct: 541 ISNLSGGWKM--KLALVRAM--LRQVDILLLDEPTNHLDVKNVAWLENFLTSQTHITSII 596 Query: 384 I 382 + Sbjct: 597 V 597
>CBIO2_LISMO (Q8Y454) Cobalt import ATP-binding protein cbiO 2| Length = 279 Score = 29.6 bits (65), Expect = 8.3 Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 2/81 (2%) Frame = -1 Query: 561 ANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFII 382 A LSGG+K ++A V AL + ++DE + LD + + V ++ + + Sbjct: 139 ARLSGGQKQRVAIAGVLALQ----PDVIILDEATSMLDPRGRAEVMETIRIMREQEDITV 194 Query: 381 ISLRNNMFEL--ADRLVGIYK 325 IS+ +++ E+ ADR++ + K Sbjct: 195 ISITHDLDEVLFADRVIVMNK 215
>Y1163_NITEU (Q82VD1) UPF0343 protein NE1163| Length = 268 Score = 29.6 bits (65), Expect = 8.3 Identities = 20/75 (26%), Positives = 37/75 (49%) Frame = +1 Query: 238 SRRSFEELLVSALGKASGVDGYTLCAIISLVDANQPIS*FKHVVSQTNNYELSILGTIFH 417 S SFEE+L S + + G+ A ++ + P+S K ++ +YE++ +G I H Sbjct: 81 SVESFEEILRSMVSRLESDSGHIEMAFPYFINKSAPVSGVKSLL----DYEVTFIGEIKH 136 Query: 418 IMSNNGYIFKIQCCI 462 N Y F ++ + Sbjct: 137 ---GNQYSFTMKVIV 148
>LRP1_HUMAN (Q07954) Low-density lipoprotein receptor-related protein 1 precursor| (LRP) (Alpha-2-macroglobulin receptor) (A2MR) (Apolipoprotein E receptor) (APOER) (CD91 antigen) Length = 4544 Score = 29.6 bits (65), Expect = 8.3 Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 20/85 (23%) Frame = -3 Query: 652 CRAGTC*FVRSIFRRCCFQCKTSQEKLE-EHCQPIWWREDAQ------------------ 530 C T ++ S R C C SQ + + C P WW+ D + Sbjct: 3315 CACPTNFYLGSDGRTCVSNCTASQFVCKNDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKC 3374 Query: 529 LPGSSVCSSPL*TN-SIVCYGRDRC 458 PG CS+ + TN + +C G + C Sbjct: 3375 RPGQFQCSTGICTNPAFICDGDNDC 3399
>MSBA_PHOLL (Q7N6C6) Lipid A export ATP-binding/permease protein msbA| Length = 581 Score = 29.6 bits (65), Expect = 8.3 Identities = 19/73 (26%), Positives = 41/73 (56%) Frame = -1 Query: 555 LSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIIS 376 LSGG++ +A+ AL + +P+ ++DE +ALD ++ + + + K+ ++I+ Sbjct: 480 LSGGQR--QRIAIARAL--LRDSPVLILDEATSALDTESERAIQAALDELQKNRTSLVIA 535 Query: 375 LRNNMFELADRLV 337 R + E AD ++ Sbjct: 536 HRLSTIENADEIL 548
>CLPC_BACSU (P37571) Negative regulator of genetic competence clpC/mecB| Length = 810 Score = 29.6 bits (65), Expect = 8.3 Identities = 19/71 (26%), Positives = 28/71 (39%) Frame = -1 Query: 648 ELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMD 469 E E SL + + V KKSWK E T+ +A+V + P Sbjct: 435 EFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVVSSWTGVPVSKIAQT 494 Query: 468 EIDAALDFKNV 436 E D L+ +N+ Sbjct: 495 ETDKLLNMENI 505
>CBIO1_CLOTE (Q890R3) Cobalt import ATP-binding protein cbiO 1| Length = 288 Score = 29.6 bits (65), Expect = 8.3 Identities = 22/74 (29%), Positives = 38/74 (51%) Frame = -1 Query: 570 KNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQ 391 K+ LSGG+K ++A V A+ + ++DE A LD K + +KD K+ Sbjct: 140 KSPFELSGGQKRRVAIAGVVAME----PEVLILDEPTAGLDPKGRDEILGEIKDLHKEYN 195 Query: 390 FIIISLRNNMFELA 349 II + ++M ++A Sbjct: 196 MTIILVSHSMEDVA 209
>UUP_ECOLI (P43672) ABC transporter ATP-binding protein uup| Length = 635 Score = 29.6 bits (65), Expect = 8.3 Identities = 17/53 (32%), Positives = 29/53 (54%) Frame = -1 Query: 585 PKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIV 427 PK++ + LSGGE+ LA +F KP+ L ++DE LD + + ++ Sbjct: 431 PKRAMTPVRALSGGERNRLLLARLF----LKPSNLLILDEPTNDLDVETLELL 479 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,150,058 Number of Sequences: 219361 Number of extensions: 2010608 Number of successful extensions: 5524 Number of sequences better than 10.0: 150 Number of HSP's better than 10.0 without gapping: 5334 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5511 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6314008338 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
