Clone Name	rbags30j23
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|XM_475481.1| Oryza sativa (japonica cultivar-group), predic...	484	e-133
2	emb|AJ488495.1|OSA488495 Oryza sativa mRNA for SMC4 protein	484	e-133
3	dbj|AK064293.1| Oryza sativa (japonica cultivar-group) cDNA clon...	484	e-133
4	gb|AY108717.1| Zea mays PCO100446 mRNA sequence	333	4e-88
5	ref|NM_124236.3| Arabidopsis thaliana ATSMC3; ATP binding AT5G48...	163	9e-37
6	gb|AC108523.2| Oryza sativa (japonica cultivar-group) chromosome...	161	4e-36
7	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	161	4e-36
8	dbj|AB015468.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	101	3e-18
9	emb|AJ532587.1|GGA532587 Gallus gallus mRNA for condensin comple...	90	1e-14
10	ref|NM_204518.1| Gallus gallus SMC4 structural maintenance of ch...	90	1e-14
11	gb|AC122544.1| Genomic sequence for Lycopersicon esculentum, clo...	88	4e-14
12	ref|XM_449298.1| Candida glabrata CBS138, CAGL0L12188g partial mRNA	84	7e-13
13	emb|CR380958.1| Candida glabrata strain CBS138 chromosome L comp...	84	7e-13
14	emb|AJ719507.1| Gallus gallus mRNA for hypothetical protein, clo...	82	3e-12
15	emb|CT033428.1| Platynereis dumerilii EST IB0AAA20BH09FM1	76	2e-10
16	ref|NM_001032755.1| Takifugu rubripes SMC4 protein (smc4), mRNA	72	3e-09
17	emb|AJ534466.1|TRU534466 Takifugu rubripes mRNA for SMC4 protein	72	3e-09
18	ref|XM_535848.2| PREDICTED: Canis familiaris similar to Structur...	70	1e-08
19	ref|XM_856494.1| PREDICTED: Canis familiaris similar to Structur...	70	1e-08
20	ref|XM_856465.1| PREDICTED: Canis familiaris similar to Structur...	70	1e-08
21	ref|XM_856436.1| PREDICTED: Canis familiaris similar to Structur...	70	1e-08
22	ref|XM_657109.1| Aspergillus nidulans FGSC A4 hypothetical prote...	68	4e-08
23	emb|AJ299717.1|MAR299717 Microtus arvalis smc4 gene for SMC4 pro...	66	2e-07
24	emb|AJ299713.1|MAR299713 Microtus arvalis partial mRNA for putat...	66	2e-07
25	emb|AM236222.1| Microtus arvalis mRNA for structural maintenance...	66	2e-07
26	gb|AY915495.1| Schistosoma japonicum SJCHGC07135 protein mRNA, p...	64	6e-07
27	ref|XM_871863.1| PREDICTED: Bos taurus SMC4 structural maintenan...	62	2e-06
28	ref|XM_871771.1| PREDICTED: Bos taurus SMC4 structural maintenan...	62	2e-06
29	ref|XM_871674.1| PREDICTED: Bos taurus SMC4 structural maintenan...	62	2e-06
30	ref|XM_586752.2| PREDICTED: Bos taurus SMC4 structural maintenan...	62	2e-06
31	ref|XM_863831.1| PREDICTED: Bos taurus SMC4 structural maintenan...	62	2e-06
32	emb|CR478286.10| Zebrafish DNA sequence from clone CH211-196B13 ...	62	2e-06
33	gb|U13673.1|XLU13673 Xenopus laevis (XCAP-C) mRNA, complete cds	62	2e-06
34	emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS...	60	1e-05
35	ref|XM_391120.1| Gibberella zeae PH-1 chromosome 3 hypothetical ...	58	4e-05
36	emb|AL929352.1|PFA929352 Plasmodium falciparum strain 3D7, chrom...	58	4e-05
37	ref|XM_665940.1| Plasmodium berghei strain ANKA hypothetical pro...	56	2e-04
38	ref|XM_396862.2| PREDICTED: Apis mellifera similar to SMC4 prote...	56	2e-04
39	ref|XM_516851.1| PREDICTED: Pan troglodytes SMC4 structural main...	54	6e-04
40	ref|XM_360835.1| Magnaporthe grisea 70-15 hypothetical protein (...	54	6e-04
41	ref|NM_005496.3| Homo sapiens SMC4 structural maintenance of chr...	54	6e-04
42	ref|NM_001002800.1| Homo sapiens SMC4 structural maintenance of ...	54	6e-04
43	ref|NM_001002799.1| Homo sapiens SMC4 structural maintenance of ...	54	6e-04
44	emb|BX537987.1|HSM806120 Homo sapiens mRNA; cDNA DKFZp686N1030 (...	54	6e-04
45	emb|AL833949.1|HSM805132 Homo sapiens mRNA; cDNA DKFZp434N2050 (...	54	6e-04
46	emb|AL136877.1|HSM801845 Homo sapiens mRNA; cDNA DKFZp434F205 (f...	54	6e-04
47	gb|AC024221.23| Homo sapiens 3 BAC RP11-227J5 (Roswell Park Canc...	54	6e-04
48	gb|AY099521.1| Danio rerio structural maintenance of chromosomes...	54	6e-04
49	dbj|AK128143.1| Homo sapiens cDNA FLJ46264 fis, clone TESTI40260...	54	6e-04
50	dbj|AK122939.1| Homo sapiens cDNA FLJ16648 fis, clone TESTI40355...	54	6e-04
51	emb|CR600091.1| full-length cDNA clone CS0DJ006YF03 of T cells (...	54	6e-04
52	dbj|AB179361.1| Macaca fascicularis testis cDNA clone: QtsA-1830...	54	6e-04
53	gb|AF092564.1|AF092564 Homo sapiens chromosome-associated protei...	54	6e-04
54	ref|NM_173253.1| Danio rerio MC4 structural maintenance of chrom...	54	6e-04
55	dbj|AB019987.1| Homo sapiens mRNA for chromosome-associated poly...	54	6e-04
56	ref|XM_632638.1| Dictyostelium discoideum structural maintenance...	52	0.002
57	ref|XM_953474.1| Neurospora crassa OR74A hypothetical protein (N...	50	0.009
58	ref|XM_331454.1| Neurospora crassa OR74A hypothetical protein (N...	50	0.009
59	ref|NM_133786.3| Mus musculus SMC4 structural maintenance of chr...	50	0.009
60	ref|XM_904099.2| PREDICTED: Mus musculus similar to SMC4 structu...	50	0.009
61	gb|BC005507.1| Mus musculus SMC4 structural maintenance of chrom...	50	0.009
62	gb|BC061481.1| Mus musculus SMC4 structural maintenance of chrom...	50	0.009
63	gb|AC122876.4| Mus musculus BAC clone RP23-113K14 from 3, comple...	50	0.009
64	ref|XM_947501.1| Theileria annulata strain Ankara hypothetical p...	50	0.009
65	gb|AC119847.12| Mus musculus chromosome 3, clone RP23-46L5, comp...	50	0.009
66	emb|AJ534940.2|MMU534940 Mus musculus mRNA for SMC4 protein	50	0.009
67	dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011	50	0.009
68	dbj|AK049487.1| Mus musculus 7 days embryo whole body cDNA, RIKE...	50	0.009
69	gb|BC025542.1| Mus musculus SMC4 structural maintenance of chrom...	50	0.009
70	gb|BC062939.1| Mus musculus SMC4 structural maintenance of chrom...	50	0.009
71	ref|XM_726157.1| Plasmodium yoelii yoelii str. 17XNL chromosome ...	48	0.037
72	emb|AL096797.1|SPBC146 S.pombe chromosome II cosmid c146	48	0.037
73	ref|NM_001021299.1| Schizosaccharomyces pombe 972h- condensin pr...	48	0.037
74	dbj|D30788.1|YSPCUT3B Schizosaccharomyces pombe gene for cut3 pr...	48	0.037
75	ref|XM_759593.1| Theileria parva strain Muguga hypothetical prot...	46	0.15
76	ref|XM_962918.1| PREDICTED: Tribolium castaneum similar to CG113...	46	0.15
77	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	46	0.15
78	dbj|AP003977.3| Oryza sativa (japonica cultivar-group) genomic D...	46	0.15
79	dbj|AP003974.3| Oryza sativa (japonica cultivar-group) genomic D...	46	0.15
80	dbj|AB086076.1| Oryza sativa (indica cultivar-group) DNA, retrop...	46	0.15
81	ref|XM_744259.1| Aspergillus fumigatus Af293 nuclear condensin c...	44	0.58
82	ref|XM_649656.1| Entamoeba histolytica HM-1:IMSS SMC4 protein (4...	44	0.58
83	gb|AC115622.2| Homo sapiens BAC clone RP11-404I7 from 4, complet...	44	0.58
84	gb|AC060765.5|AC060765 Homo sapiens chromosome 8, clone RP11-653...	44	0.58
85	gb|AC110751.5| Homo sapiens BAC clone RP13-511C16 from 4, comple...	44	0.58
86	gb|AC024558.21| Homo sapiens 3 BAC RP11-390G14 (Roswell Park Can...	44	0.58
87	gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chr...	42	2.3
88	gb|AC183678.2| Pan troglodytes BAC clone CH251-485O9 from chromo...	42	2.3
89	gb|AC147648.4| Homo sapiens BAC clone RP11-1413M17 from UL, comp...	42	2.3
90	ref|XM_711769.1| Candida albicans SC5314 putative nuclear conden...	42	2.3
91	ref|XM_711709.1| Candida albicans SC5314 putative nuclear conden...	42	2.3
92	gb|AC145613.2| Homo sapiens BAC clone RP11-1266H24 from UL, comp...	42	2.3
93	gb|AC145616.2| Homo sapiens BAC clone RP11-1172A19 from UL, comp...	42	2.3
94	gb|AC142384.2| Homo sapiens chromosome 16 clone RP11-293B20, com...	42	2.3
95	gb|AC145547.3| Homo sapiens BAC clone RP11-1437O6 from UL, compl...	42	2.3
96	emb|CR932234.1|CNS0KYIP Structural maintenance of chromosomes 3,...	42	2.3
97	ref|XM_571168.1| Cryptococcus neoformans var. neoformans JEC21 h...	42	2.3
98	gb|AC144916.3| Homo sapiens BAC clone RP11-15L7 from UL, complet...	42	2.3
99	gb|AC087386.7| Homo sapiens chromosome 15, clone RP11-173D3, com...	42	2.3
100	emb|CR381572.5| Human DNA sequence from clone bP-2168N6 on chrom...	42	2.3
101	gb|AC123980.19| Pan troglodytes clone rp43-118j16, complete sequ...	42	2.3
102	gb|AC104248.3| Homo sapiens chromosome 8, clone RP11-1084E5, com...	42	2.3
103	gb|AC104945.4| Homo sapiens chromosome 8, clone RP11-384L9, comp...	42	2.3
104	gb|AC087435.5| Homo sapiens chromosome 8, clone RP11-79O20, comp...	42	2.3
105	gb|AC126335.16| Homo sapiens chromosome 15, clone RP11-854K16, c...	42	2.3
106	gb|AC139476.3| Homo sapiens chromosome 16 clone RP11-341P6, comp...	42	2.3
107	gb|AC133548.2| Homo sapiens chromosome 16 clone RP11-17M15, comp...	42	2.3
108	gb|AC009091.9| Homo sapiens chromosome 16 clone RP11-408D2, comp...	42	2.3
109	gb|AC126603.9| Homo sapiens chromosome 15, clone RP11-492D6, com...	42	2.3
110	gb|AC145217.2| Homo sapiens BAC clone RP11-527C10 from 2, comple...	42	2.3
111	gb|AC018696.4| Homo sapiens BAC clone RP11-575H3 from 2, complet...	42	2.3
112	gb|AC116050.3| Homo sapiens BAC clone RP11-427F2 from 2, complet...	42	2.3
113	gb|AC113612.3| Homo sapiens BAC clone RP11-433C18 from 2, comple...	42	2.3
114	gb|AC136944.3| Homo sapiens chromosome 16 clone RP11-23E10, comp...	42	2.3
115	gb|AC068279.6| Homo sapiens BAC clone RP11-153P14 from 2, comple...	42	2.3
116	gb|AC133920.2| Homo sapiens chromosome 16 clone RP11-413O9, comp...	42	2.3
117	gb|AC145614.3| Homo sapiens chromosome UNKNOWN clone RP11-1210E1...	42	2.3
118	gb|AC144898.3| Homo sapiens chromosome UNKNOWN clone RP11-247L13...	42	2.3
119	emb|BX546448.4| Human DNA sequence from clone RP11-509J10 on chr...	42	2.3
120	ref|NG_000002.1| Homo sapiens immunoglobulin lambda locus (IGL@)...	42	2.3
121	dbj|AP001095.5| Homo sapiens genomic DNA, chromosome 18 clone:RP...	42	2.3
122	dbj|AP000547.1| Homo sapiens genomic DNA, chromosome 22q11.2, Ca...	42	2.3
123	dbj|AP004284.2| Homo sapiens genomic DNA, chromosome 8q23, clone...	42	2.3
124	dbj|AP004580.2| Homo sapiens genomic DNA, chromosome 8q23, clone...	42	2.3
125	dbj|D87003.1| Homo sapiens immunoglobulin lambda gene locus DNA,...	42	2.3
126	dbj|AB051438.1| Homo sapiens mRNA for KIAA1651 protein, partial cds	42	2.3
127	gb|AC145545.2| Homo sapiens chromosome UNKNOWN clone RP11-1365M9...	40	9.0
128	gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome	40	9.0
129	gb|AC142146.3| Mus musculus BAC clone RP24-74D8 from chromosome ...	40	9.0
130	gb|AY579200.1| Tetrahymena thermophila condensin subunit (SMC4) ...	40	9.0
131	gb|AC129778.5| Homo sapiens BAC clone RP11-1221G12 from UL, comp...	40	9.0
132	gb|AC123924.4| Mus musculus BAC clone RP24-292A3 from chromosome...	40	9.0
133	gb|AC144508.3| Mus musculus BAC clone RP24-152C23 from chromosom...	40	9.0
134	gb|AC118240.8| Mus musculus chromosome 16, clone RP23-186J5, com...	40	9.0
135	ref|XM_663413.1| Cryptosporidium hominis TU502 stable maintenanc...	40	9.0
136	emb|BX284632.11| Human DNA sequence from clone RP11-460E7 on chr...	40	9.0
137	emb|AL845321.4| Human DNA sequence from clone RP11-236F9 on chro...	40	9.0
138	emb|AL591379.18| Human DNA sequence from clone RP11-381O7 on chr...	40	9.0
139	emb|AL512605.13| Human DNA sequence from clone RP11-15J10 on chr...	40	9.0
140	emb|AL445665.20| Human DNA sequence from clone RP11-574E24 on ch...	40	9.0
141	emb|AL359955.25| Human DNA sequence from clone RP11-460N11 on ch...	40	9.0
142	emb|AL356499.16| Human DNA sequence from clone RP1-315J21 on chr...	40	9.0
143	emb|AL161423.9| Human DNA sequence from clone RP11-168J5 on chro...	40	9.0
144	gb|AC131886.5| Rattus norvegicus 4 BAC CH230-53A1 (Children's Ho...	40	9.0
145	emb|BX571714.7| Zebrafish DNA sequence from clone DKEY-16L2 in l...	40	9.0
146	gb|AC090675.10| Homo sapiens 12 BAC RP11-681A17 (Roswell Park Ca...	40	9.0
147	gb|AC079919.5| Homo sapiens BAC clone RP11-291N5 from 4, complet...	40	9.0
148	gb|AC026273.7| Homo sapiens BAC clone CTD-2314M3 from 2, complet...	40	9.0
149	ref|XM_628360.1| Cryptosporidium parvum Iowa II SMC4'SMC4, (cgd7...	40	9.0
150	gb|AC161372.2| Mus musculus BAC clone RP23-326G14 from chromosom...	40	9.0
151	gb|AC158635.6| Mus musculus 10 BAC RP23-396A23 (Roswell Park Can...	40	9.0
152	gb|AC068339.6| Homo sapiens chromosome 11, clone RP11-328E22, co...	40	9.0
153	gb|AC019067.9| Homo sapiens BAC clone RP11-171B14 from 2, comple...	40	9.0
154	gb|AC034151.6| Homo sapiens BAC clone RP11-168J1 from 2, complet...	40	9.0
155	gb|AC128677.4| Homo sapiens BAC clone RP11-271A22 from 2, comple...	40	9.0
156	emb|BX914207.15| Zebrafish DNA sequence from clone DKEY-158P11 i...	40	9.0
157	gb|AY870621.1| Natrix natrix voucher MNCN 13796 NADH dehydrogena...	40	9.0
158	gb|AY870620.1| Natrix natrix voucher MVZ 200534 NADH dehydrogena...	40	9.0
159	emb|AL928885.9| Zebrafish DNA sequence from clone CH211-195G24 i...	40	9.0
160	emb|CT025655.16| Mouse DNA sequence from clone RP23-429H3 on chr...	40	9.0
161	dbj|AP001214.3| Homo sapiens genomic DNA, chromosome 2p11.2, clo...	40	9.0

---

>ref|XM_475481.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3726

 Score =  484 bits (244), Expect = e-133
 Identities = 352/388 (90%)
 Strand = Plus / Minus

                                                                        
Query: 271  gctctcggcaaagcttccggggtcgatggttatactctttgtgcaattatcagtcttgta 330
            |||||| |||||||||||||| | ||||||||||||||| ||||||||||| ||||||||
Sbjct: 3711 gctctccgcaaagcttccgggattgatggttatactcttggtgcaattatccgtcttgta 3652

                                                                        
Query: 331  gatgccaaccagcctatcagctaattcaaacatgttgtttctcagactaataattatgaa 390
            ||||||||||||||||||||||| |||||||||||||||||| ||||| ||||| |||||
Sbjct: 3651 gatgccaaccagcctatcagctagttcaaacatgttgtttctgagactgataataatgaa 3592

                                                                        
Query: 391  ctgagcatccttggtacgatctttcacataatgtccaacaatggatacatttttaaaatc 450
            ||||||||| ||||| || |||||||| ||||||||||| ||||| ||||| ||||| ||
Sbjct: 3591 ctgagcatctttggtccggtctttcacgtaatgtccaacgatggagacattcttaaagtc 3532

                                                                        
Query: 451  caatgctgcatctatctcgtccataacatacaatggagttggtttataatggtgaagagc 510
            ||| || ||||||||||| ||||||||||| || ||||||||||||||||||||||||||
Sbjct: 3531 caacgcagcatctatctcatccataacatataaaggagttggtttataatggtgaagagc 3472

                                                                        
Query: 511  aaacactagagccagggagctgagcgtcttctcgccaccagataggttggcaatgttctt 570
            |||||| ||||| || ||||| |||||||| |||||||||||||  ||||||||||| ||
Sbjct: 3471 aaacaccagagctagtgagctaagcgtcttttcgccaccagataaattggcaatgttttt 3412

                                                                        
Query: 571  ccagcttttcttgggaggtcttacactgaaaacaacaccttctgaaaatggatctaacga 630
            ||||||||||||||||||||| |||||||||||||||||||||||||| || || || ||
Sbjct: 3411 ccagcttttcttgggaggtctaacactgaaaacaacaccttctgaaaacgggtccaagga 3352

                                        
Query: 631  atcaacaagttccagctctgcatcacct 658
            |||||||||||||||||| |||||||||
Sbjct: 3351 atcaacaagttccagctcagcatcacct 3324

---

>emb|AJ488495.1|OSA488495 Oryza sativa mRNA for SMC4 protein
          Length = 3711

 Score =  484 bits (244), Expect = e-133
 Identities = 352/388 (90%)
 Strand = Plus / Minus

                                                                        
Query: 271  gctctcggcaaagcttccggggtcgatggttatactctttgtgcaattatcagtcttgta 330
            |||||| |||||||||||||| | ||||||||||||||| ||||||||||| ||||||||
Sbjct: 3696 gctctccgcaaagcttccgggattgatggttatactcttggtgcaattatccgtcttgta 3637

                                                                        
Query: 331  gatgccaaccagcctatcagctaattcaaacatgttgtttctcagactaataattatgaa 390
            ||||||||||||||||||||||| |||||||||||||||||| ||||| ||||| |||||
Sbjct: 3636 gatgccaaccagcctatcagctagttcaaacatgttgtttctgagactgataataatgaa 3577

                                                                        
Query: 391  ctgagcatccttggtacgatctttcacataatgtccaacaatggatacatttttaaaatc 450
            ||||||||| ||||| || |||||||| ||||||||||| ||||| ||||| ||||| ||
Sbjct: 3576 ctgagcatctttggtccggtctttcacgtaatgtccaacgatggagacattcttaaagtc 3517

                                                                        
Query: 451  caatgctgcatctatctcgtccataacatacaatggagttggtttataatggtgaagagc 510
            ||| || ||||||||||| ||||||||||| || ||||||||||||||||||||||||||
Sbjct: 3516 caacgcagcatctatctcatccataacatataaaggagttggtttataatggtgaagagc 3457

                                                                        
Query: 511  aaacactagagccagggagctgagcgtcttctcgccaccagataggttggcaatgttctt 570
            |||||| ||||| || ||||| |||||||| |||||||||||||  ||||||||||| ||
Sbjct: 3456 aaacaccagagctagtgagctaagcgtcttttcgccaccagataaattggcaatgttttt 3397

                                                                        
Query: 571  ccagcttttcttgggaggtcttacactgaaaacaacaccttctgaaaatggatctaacga 630
            ||||||||||||||||||||| |||||||||||||||||||||||||| || || || ||
Sbjct: 3396 ccagcttttcttgggaggtctaacactgaaaacaacaccttctgaaaacgggtccaagga 3337

                                        
Query: 631  atcaacaagttccagctctgcatcacct 658
            |||||||||||||||||| |||||||||
Sbjct: 3336 atcaacaagttccagctcagcatcacct 3309

---

>dbj|AK064293.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-H08, full
            insert sequence
          Length = 1708

 Score =  484 bits (244), Expect = e-133
 Identities = 352/388 (90%)
 Strand = Plus / Minus

                                                                        
Query: 271  gctctcggcaaagcttccggggtcgatggttatactctttgtgcaattatcagtcttgta 330
            |||||| |||||||||||||| | ||||||||||||||| ||||||||||| ||||||||
Sbjct: 1491 gctctccgcaaagcttccgggattgatggttatactcttggtgcaattatccgtcttgta 1432

                                                                        
Query: 331  gatgccaaccagcctatcagctaattcaaacatgttgtttctcagactaataattatgaa 390
            ||||||||||||||||||||||| |||||||||||||||||| ||||| ||||| |||||
Sbjct: 1431 gatgccaaccagcctatcagctagttcaaacatgttgtttctgagactgataataatgaa 1372

                                                                        
Query: 391  ctgagcatccttggtacgatctttcacataatgtccaacaatggatacatttttaaaatc 450
            ||||||||| ||||| || |||||||| ||||||||||| ||||| ||||| ||||| ||
Sbjct: 1371 ctgagcatctttggtccggtctttcacgtaatgtccaacgatggagacattcttaaagtc 1312

                                                                        
Query: 451  caatgctgcatctatctcgtccataacatacaatggagttggtttataatggtgaagagc 510
            ||| || ||||||||||| ||||||||||| || ||||||||||||||||||||||||||
Sbjct: 1311 caacgcagcatctatctcatccataacatataaaggagttggtttataatggtgaagagc 1252

                                                                        
Query: 511  aaacactagagccagggagctgagcgtcttctcgccaccagataggttggcaatgttctt 570
            |||||| ||||| || ||||| |||||||| |||||||||||||  ||||||||||| ||
Sbjct: 1251 aaacaccagagctagtgagctaagcgtcttttcgccaccagataaattggcaatgttttt 1192

                                                                        
Query: 571  ccagcttttcttgggaggtcttacactgaaaacaacaccttctgaaaatggatctaacga 630
            ||||||||||||||||||||| |||||||||||||||||||||||||| || || || ||
Sbjct: 1191 ccagcttttcttgggaggtctaacactgaaaacaacaccttctgaaaacgggtccaagga 1132

                                        
Query: 631  atcaacaagttccagctctgcatcacct 658
            |||||||||||||||||| |||||||||
Sbjct: 1131 atcaacaagttccagctcagcatcacct 1104



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 139  aagctcgatgccaaaggaacctcggttccatgatggcac 177
            ||||| ||| || ||||||||||||||||||| ||||||
Sbjct: 1593 aagcttgataccgaaggaacctcggttccatgctggcac 1555

---

>gb|AY108717.1| Zea mays PCO100446 mRNA sequence
          Length = 757

 Score =  333 bits (168), Expect = 4e-88
 Identities = 333/388 (85%)
 Strand = Plus / Minus

                                                                       
Query: 271 gctctcggcaaagcttccggggtcgatggttatactctttgtgcaattatcagtcttgta 330
           |||||||||||||||||| |||| ||| ||||| ||||| |||||||| || ||||||||
Sbjct: 521 gctctcggcaaagcttcctgggttgatcgttatgctcttggtgcaattgtccgtcttgta 462

                                                                       
Query: 331 gatgccaaccagcctatcagctaattcaaacatgttgtttctcagactaataattatgaa 390
            || ||||||| ||| || |||| ||||||||||||||| |||||||| ||||| |||||
Sbjct: 461 aataccaaccaacctgtcggctagttcaaacatgttgttcctcagacttataatgatgaa 402

                                                                       
Query: 391 ctgagcatccttggtacgatctttcacataatgtccaacaatggatacatttttaaaatc 450
            || ||||| ||||| | |||||||||||| ||||| ||||| ||||| || ||||| ||
Sbjct: 401 ttgcgcatctttggtcctatctttcacatagtgtcccacaattgatacgttcttaaagtc 342

                                                                       
Query: 451 caatgctgcatctatctcgtccataacatacaatggagttggtttataatggtgaagagc 510
           ||| || ||||| ||||| ||||||||||| || ||||| |||||||| |||||||||||
Sbjct: 341 caacgcagcatcaatctcatccataacatataaaggagtaggtttatagtggtgaagagc 282

                                                                       
Query: 511 aaacactagagccagggagctgagcgtcttctcgccaccagataggttggcaatgttctt 570
           |||||| | |||||| || || || |||||||| ||||||||||  |||||||| || ||
Sbjct: 281 aaacaccaaagccagtgaactaagtgtcttctcaccaccagataaattggcaatattttt 222

                                                                       
Query: 571 ccagcttttcttgggaggtcttacactgaaaacaacaccttctgaaaatggatctaacga 630
           |||||||||||| || || || ||||||||||||||||||||||||||||| || || ||
Sbjct: 221 ccagcttttctttgggggcctcacactgaaaacaacaccttctgaaaatgggtccaagga 162

                                       
Query: 631 atcaacaagttccagctctgcatcacct 658
           ||||||||||||||| || |||||||||
Sbjct: 161 atcaacaagttccagttcagcatcacct 134

---

>ref|NM_124236.3| Arabidopsis thaliana ATSMC3; ATP binding AT5G48600 (ATSMC3) mRNA,
            complete cds
          Length = 3796

 Score =  163 bits (82), Expect = 9e-37
 Identities = 277/342 (80%)
 Strand = Plus / Minus

                                                                        
Query: 317  ttatcagtcttgtagatgccaaccagcctatcagctaattcaaacatgttgtttctcaga 376
            ||||| || |||||||| || ||||  ||||| ||||  |||||||||||||| |||| |
Sbjct: 3693 ttatctgttttgtagattcccaccaatctatctgctagctcaaacatgttgttcctcaaa 3634

                                                                        
Query: 377  ctaataattatgaactgagcatccttggtacgatctttcacataatgtccaacaatggat 436
            || || || |||||||||||||| || || || |||||||| ||||||||||| || |||
Sbjct: 3633 ctgatgataatgaactgagcatctttagtccggtctttcacgtaatgtccaacgattgat 3574

                                                                        
Query: 437  acatttttaaaatccaatgctgcatctatctcgtccataacatacaatggagttggttta 496
            || ||||| || || |  || || || || |||||||| || || | |||||| || || 
Sbjct: 3573 acgtttttgaagtcgagagcagcgtcgatttcgtccatgacgtaaagtggagtaggcttg 3514

                                                                        
Query: 497  taatggtgaagagcaaacactagagccagggagctgagcgtcttctcgccaccagatagg 556
            || || || || ||||| ||||| || || |||||||| ||||| || ||||| || | |
Sbjct: 3513 tagtgatggagtgcaaagactagtgcgagtgagctgagtgtcttttcaccacccgacaag 3454

                                                                        
Query: 557  ttggcaatgttcttccagcttttcttgggaggtcttacactgaaaacaacaccttctgaa 616
            || ||||||||||||||||| ||||||||||||||||||||||| || ||||||||||| 
Sbjct: 3453 tttgcaatgttcttccagctcttcttgggaggtcttacactgaataccacaccttctgag 3394

                                                      
Query: 617  aatggatctaacgaatcaacaagttccagctctgcatcacct 658
            || || || | ||| || || || ||||||||||||||||||
Sbjct: 3393 aaagggtccagcgagtctaccagctccagctctgcatcacct 3352

---

>gb|AC108523.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1118_C04,
             complete sequence
          Length = 96328

 Score =  161 bits (81), Expect = 4e-36
 Identities = 108/117 (92%)
 Strand = Plus / Minus

                                                                         
Query: 542   tcgccaccagataggttggcaatgttcttccagcttttcttgggaggtcttacactgaaa 601
             |||||||||||||  ||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 45870 tcgccaccagataaattggcaatgtttttccagcttttcttgggaggtctaacactgaaa 45811

                                                                      
Query: 602   acaacaccttctgaaaatggatctaacgaatcaacaagttccagctctgcatcacct 658
             ||||||||||||||||| || || || |||||||||||||||||||| |||||||||
Sbjct: 45810 acaacaccttctgaaaacgggtccaaggaatcaacaagttccagctcagcatcacct 45754



 Score =  159 bits (80), Expect = 1e-35
 Identities = 101/108 (93%)
 Strand = Plus / Minus

                                                                         
Query: 271   gctctcggcaaagcttccggggtcgatggttatactctttgtgcaattatcagtcttgta 330
             |||||| |||||||||||||| | ||||||||||||||| ||||||||||| ||||||||
Sbjct: 46724 gctctccgcaaagcttccgggattgatggttatactcttggtgcaattatccgtcttgta 46665

                                                             
Query: 331   gatgccaaccagcctatcagctaattcaaacatgttgtttctcagact 378
             ||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 46664 gatgccaaccagcctatcagctagttcaaacatgttgtttctgagact 46617



 Score =  107 bits (54), Expect = 5e-20
 Identities = 75/82 (91%)
 Strand = Plus / Minus

                                                                         
Query: 458   gcatctatctcgtccataacatacaatggagttggtttataatggtgaagagcaaacact 517
             ||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||| 
Sbjct: 46199 gcatctatctcatccataacatataaaggagttggtttataatggtgaagagcaaacacc 46140

                                   
Query: 518   agagccagggagctgagcgtct 539
             ||||| || ||||| |||||||
Sbjct: 46139 agagctagtgagctaagcgtct 46118



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                         
Query: 380   ataattatgaactgagcatccttggtacgatctttcacataatgtccaacaatggataca 439
             ||||| |||||||||||||| ||||| || |||||||| ||||||||||| ||||| |||
Sbjct: 46353 ataataatgaactgagcatctttggtccggtctttcacgtaatgtccaacgatggagaca 46294

                     
Query: 440   tttttaaa 447
             || |||||
Sbjct: 46293 ttcttaaa 46286



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 139   aagctcgatgccaaaggaacctcggttccatgatggcac 177
             ||||| ||| || ||||||||||||||||||| ||||||
Sbjct: 46826 aagcttgataccgaaggaacctcggttccatgctggcac 46788

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  161 bits (81), Expect = 4e-36
 Identities = 108/117 (92%)
 Strand = Plus / Minus

                                                                            
Query: 542      tcgccaccagataggttggcaatgttcttccagcttttcttgggaggtcttacactgaaa 601
                |||||||||||||  ||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 24280134 tcgccaccagataaattggcaatgtttttccagcttttcttgggaggtctaacactgaaa 24280075

                                                                         
Query: 602      acaacaccttctgaaaatggatctaacgaatcaacaagttccagctctgcatcacct 658
                ||||||||||||||||| || || || |||||||||||||||||||| |||||||||
Sbjct: 24280074 acaacaccttctgaaaacgggtccaaggaatcaacaagttccagctcagcatcacct 24280018



 Score =  159 bits (80), Expect = 1e-35
 Identities = 101/108 (93%)
 Strand = Plus / Minus

                                                                            
Query: 271      gctctcggcaaagcttccggggtcgatggttatactctttgtgcaattatcagtcttgta 330
                |||||| |||||||||||||| | ||||||||||||||| ||||||||||| ||||||||
Sbjct: 24280988 gctctccgcaaagcttccgggattgatggttatactcttggtgcaattatccgtcttgta 24280929

                                                                
Query: 331      gatgccaaccagcctatcagctaattcaaacatgttgtttctcagact 378
                ||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 24280928 gatgccaaccagcctatcagctagttcaaacatgttgtttctgagact 24280881



 Score =  107 bits (54), Expect = 5e-20
 Identities = 75/82 (91%)
 Strand = Plus / Minus

                                                                            
Query: 458      gcatctatctcgtccataacatacaatggagttggtttataatggtgaagagcaaacact 517
                ||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||| 
Sbjct: 24280463 gcatctatctcatccataacatataaaggagttggtttataatggtgaagagcaaacacc 24280404

                                      
Query: 518      agagccagggagctgagcgtct 539
                ||||| || ||||| |||||||
Sbjct: 24280403 agagctagtgagctaagcgtct 24280382



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                            
Query: 380      ataattatgaactgagcatccttggtacgatctttcacataatgtccaacaatggataca 439
                ||||| |||||||||||||| ||||| || |||||||| ||||||||||| ||||| |||
Sbjct: 24280617 ataataatgaactgagcatctttggtccggtctttcacgtaatgtccaacgatggagaca 24280558

                        
Query: 440      tttttaaa 447
                || |||||
Sbjct: 24280557 ttcttaaa 24280550



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                       
Query: 139      aagctcgatgccaaaggaacctcggttccatgatggcac 177
                ||||| ||| || ||||||||||||||||||| ||||||
Sbjct: 24281090 aagcttgataccgaaggaacctcggttccatgctggcac 24281052

---

>dbj|AB015468.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K15N18
          Length = 66084

 Score =  101 bits (51), Expect = 3e-18
 Identities = 87/99 (87%)
 Strand = Plus / Minus

                                                                         
Query: 560   gcaatgttcttccagcttttcttgggaggtcttacactgaaaacaacaccttctgaaaat 619
             ||||||||||||||||| ||||||||||||||||||||||| || ||||||||||| || 
Sbjct: 29661 gcaatgttcttccagctcttcttgggaggtcttacactgaataccacaccttctgagaaa 29602

                                                    
Query: 620   ggatctaacgaatcaacaagttccagctctgcatcacct 658
             || || | ||| || || || ||||||||||||||||||
Sbjct: 29601 gggtccagcgagtctaccagctccagctctgcatcacct 29563



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                        
Query: 386   atgaactgagcatccttggtacgatctttcacataatgtccaacaatggatacattttt 444
             |||||||||||||| || || || |||||||| ||||||||||| || ||||| |||||
Sbjct: 29991 atgaactgagcatctttagtccggtctttcacgtaatgtccaacgattgatacgttttt 29933

---

>emb|AJ532587.1|GGA532587 Gallus gallus mRNA for condensin complex subunit (SMC4 gene)
          Length = 3825

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 132/161 (81%)
 Strand = Plus / Minus

                                                                        
Query: 428  acaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatgga 487
            ||||||||||||||||| || || | ||||||||| ||||| ||||||| ||||| ||| 
Sbjct: 3611 acaatggatacatttttgaagtcaagtgctgcatcaatctcatccataaaatacagtggt 3552

                                                                        
Query: 488  gttggtttataatggtgaagagcaaacactagagccagggagctgagcgtcttctcgcca 547
            ||||| || ||||| ||||| ||||| |||| |||||| || || || |||||||| || 
Sbjct: 3551 gttggcttgtaatgatgaagtgcaaaaactaaagccagtgaactaagagtcttctctcct 3492

                                                     
Query: 548  ccagataggttggcaatgttcttccagcttttcttgggagg 588
            || |||| |||    || ||||||||||||||||| |||||
Sbjct: 3491 cctgataagttaaatatcttcttccagcttttctttggagg 3451

---

>ref|NM_204518.1| Gallus gallus SMC4 structural maintenance of chromosomes 4-like 1
            (yeast) (SMC4L1), mRNA
          Length = 3825

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 132/161 (81%)
 Strand = Plus / Minus

                                                                        
Query: 428  acaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatgga 487
            ||||||||||||||||| || || | ||||||||| ||||| ||||||| ||||| ||| 
Sbjct: 3611 acaatggatacatttttgaagtcaagtgctgcatcaatctcatccataaaatacagtggt 3552

                                                                        
Query: 488  gttggtttataatggtgaagagcaaacactagagccagggagctgagcgtcttctcgcca 547
            ||||| || ||||| ||||| ||||| |||| |||||| || || || |||||||| || 
Sbjct: 3551 gttggcttgtaatgatgaagtgcaaaaactaaagccagtgaactaagagtcttctctcct 3492

                                                     
Query: 548  ccagataggttggcaatgttcttccagcttttcttgggagg 588
            || |||| |||    || ||||||||||||||||| |||||
Sbjct: 3491 cctgataagttaaatatcttcttccagcttttctttggagg 3451

---

>gb|AC122544.1| Genomic sequence for Lycopersicon esculentum, clone L136C6, complete
              sequence
          Length = 121637

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                          
Query: 545    ccaccagataggttggcaatgttcttccagcttttcttgggaggtcttacactgaaaaca 604
              ||||| |||| ||| ||||| ||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 107989 ccacctgataagttagcaatattcttccagctcttctttggaggtctaacactgaaaaca 107930

                                  
Query: 605    acaccttctgaaaatggatc 624
              |||||||| ||||| |||||
Sbjct: 107929 acaccttcagaaaacggatc 107910



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                          
Query: 383    attatgaactgagcatccttggtacgatctttcacataatgtccaacaatggatacattt 442
              ||||||||||| ||||| || || |  || ||||||||||| ||||| || || ||||| 
Sbjct: 108330 attatgaactgtgcatctttagttctgtccttcacataatgcccaacgatcgagacattc 108271

                      
Query: 443    ttaaaatc 450
              ||||||||
Sbjct: 108270 ttaaaatc 108263

---

>ref|XM_449298.1| Candida glabrata CBS138, CAGL0L12188g partial mRNA
          Length = 4197

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                        
Query: 449  tccaatgctgcatctatctcgtccataacatacaatggagttggtttataatggtgaaga 508
            |||||||| ||||| ||||| ||||||||||||| ||||||||||||||| | |||||| 
Sbjct: 4013 tccaatgcagcatcaatctcatccataacatacagtggagttggtttatacttgtgaagg 3954

                          
Query: 509  gcaaacactagagc 522
            |||||||| |||||
Sbjct: 3953 gcaaacacaagagc 3940

---

>emb|CR380958.1| Candida glabrata strain CBS138 chromosome L complete sequence
          Length = 1440588

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                           
Query: 449     tccaatgctgcatctatctcgtccataacatacaatggagttggtttataatggtgaaga 508
               |||||||| ||||| ||||| ||||||||||||| ||||||||||||||| | |||||| 
Sbjct: 1312684 tccaatgcagcatcaatctcatccataacatacagtggagttggtttatacttgtgaagg 1312625

                             
Query: 509     gcaaacactagagc 522
               |||||||| |||||
Sbjct: 1312624 gcaaacacaagagc 1312611

---

>emb|AJ719507.1| Gallus gallus mRNA for hypothetical protein, clone 2o19
          Length = 2441

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 131/161 (81%)
 Strand = Plus / Minus

                                                                        
Query: 428  acaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatgga 487
            ||||||||||||||||| || || | ||||||||| ||| | ||||||| ||||| ||| 
Sbjct: 2055 acaatggatacatttttgaagtcaagtgctgcatcaatcccatccataaaatacagtggt 1996

                                                                        
Query: 488  gttggtttataatggtgaagagcaaacactagagccagggagctgagcgtcttctcgcca 547
            ||||| || ||||| ||||| ||||| |||| |||||| || || || |||||||| || 
Sbjct: 1995 gttggcttgtaatgatgaagtgcaaaaactaaagccagtgaactaagagtcttctctcct 1936

                                                     
Query: 548  ccagataggttggcaatgttcttccagcttttcttgggagg 588
            || |||| |||    || ||||||||||||||||| |||||
Sbjct: 1935 cctgataagttaaatatcttcttccagcttttctttggagg 1895

---

>emb|CT033428.1| Platynereis dumerilii EST IB0AAA20BH09FM1
          Length = 845

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 98/118 (83%)
 Strand = Plus / Plus

                                                                       
Query: 426 caacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatg 485
           |||||||||| ||||| || |||||||  || ||||| ||||||||||| ||||| | ||
Sbjct: 616 caacaatggagacattcttgaaatccagggcggcatcaatctcgtccatgacatagagtg 675

                                                                     
Query: 486 gagttggtttataatggtgaagagcaaacactagagccagggagctgagcgtcttctc 543
           | |||||||| |||||||| |  |||||||| |  ||||| |||||||| ||||||||
Sbjct: 676 gggttggtttgtaatggtgcaaggcaaacaccaacgccagcgagctgagggtcttctc 733



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 322 agtcttgtagatgccaaccagcctatcagctaattcaaacatgttgtttctca 374
           ||||||||| || |||| || || |||||| | ||||||||||||||| ||||
Sbjct: 512 agtcttgtaaataccaatcaaccgatcagccagttcaaacatgttgttcctca 564

---

>ref|NM_001032755.1| Takifugu rubripes SMC4 protein (smc4), mRNA
          Length = 3981

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 96/116 (82%)
 Strand = Plus / Minus

                                                                        
Query: 428  acaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatgga 487
            |||||||| |||||||| || || | ||| ||||| ||||||||||| |  || |  || 
Sbjct: 3683 acaatggagacatttttgaagtctagtgcagcatcgatctcgtccatgaagtagagcggc 3624

                                                                    
Query: 488  gttggtttataatggtgaagagcaaacactagagccagggagctgagcgtcttctc 543
            || ||||| || ||||| ||||||||||| ||||||||||||||||| ||||||||
Sbjct: 3623 gtgggtttgtagtggtgcagagcaaacaccagagccagggagctgagggtcttctc 3568

---

>emb|AJ534466.1|TRU534466 Takifugu rubripes mRNA for SMC4 protein
          Length = 3981

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 96/116 (82%)
 Strand = Plus / Minus

                                                                        
Query: 428  acaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatgga 487
            |||||||| |||||||| || || | ||| ||||| ||||||||||| |  || |  || 
Sbjct: 3683 acaatggagacatttttgaagtctagtgcagcatcgatctcgtccatgaagtagagcggc 3624

                                                                    
Query: 488  gttggtttataatggtgaagagcaaacactagagccagggagctgagcgtcttctc 543
            || ||||| || ||||| ||||||||||| ||||||||||||||||| ||||||||
Sbjct: 3623 gtgggtttgtagtggtgcagagcaaacaccagagccagggagctgagggtcttctc 3568

---

>ref|XM_535848.2| PREDICTED: Canis familiaris similar to Structural maintenance of
            chromosomes 4-like 1 protein (Chromosome-associated
            polypeptide C) (hCAP-C) (XCAP-C homolog), transcript
            variant 1 (LOC478679), mRNA
          Length = 4331

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 83/99 (83%)
 Strand = Plus / Minus

                                                                        
Query: 426  caacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatg 485
            |||||||||| |||||||||||||| |  |||||||| ||||| ||||| |  ||||  |
Sbjct: 3735 caacaatggacacatttttaaaatcaagggctgcatcgatctcatccatgaagtacagag 3676

                                                   
Query: 486  gagttggtttataatggtgaagagcaaacactagagcca 524
            |||| ||||| || |||||||||||||| |||| |||||
Sbjct: 3675 gagtgggtttgtagtggtgaagagcaaatactaaagcca 3637

---

>ref|XM_856494.1| PREDICTED: Canis familiaris similar to Structural maintenance of
            chromosomes 4-like 1 protein (Chromosome-associated
            polypeptide C) (hCAP-C) (XCAP-C homolog), transcript
            variant 4 (LOC478679), mRNA
          Length = 4157

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 83/99 (83%)
 Strand = Plus / Minus

                                                                        
Query: 426  caacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatg 485
            |||||||||| |||||||||||||| |  |||||||| ||||| ||||| |  ||||  |
Sbjct: 3561 caacaatggacacatttttaaaatcaagggctgcatcgatctcatccatgaagtacagag 3502

                                                   
Query: 486  gagttggtttataatggtgaagagcaaacactagagcca 524
            |||| ||||| || |||||||||||||| |||| |||||
Sbjct: 3501 gagtgggtttgtagtggtgaagagcaaatactaaagcca 3463

---

>ref|XM_856465.1| PREDICTED: Canis familiaris similar to Structural maintenance of
            chromosomes 4-like 1 protein (Chromosome-associated
            polypeptide C) (hCAP-C) (XCAP-C homolog), transcript
            variant 3 (LOC478679), mRNA
          Length = 4081

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 83/99 (83%)
 Strand = Plus / Minus

                                                                        
Query: 426  caacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatg 485
            |||||||||| |||||||||||||| |  |||||||| ||||| ||||| |  ||||  |
Sbjct: 3485 caacaatggacacatttttaaaatcaagggctgcatcgatctcatccatgaagtacagag 3426

                                                   
Query: 486  gagttggtttataatggtgaagagcaaacactagagcca 524
            |||| ||||| || |||||||||||||| |||| |||||
Sbjct: 3425 gagtgggtttgtagtggtgaagagcaaatactaaagcca 3387

---

>ref|XM_856436.1| PREDICTED: Canis familiaris similar to Structural maintenance of
            chromosomes 4-like 1 protein (Chromosome-associated
            polypeptide C) (hCAP-C) (XCAP-C homolog), transcript
            variant 2 (LOC478679), mRNA
          Length = 3498

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 83/99 (83%)
 Strand = Plus / Minus

                                                                        
Query: 426  caacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatg 485
            |||||||||| |||||||||||||| |  |||||||| ||||| ||||| |  ||||  |
Sbjct: 2902 caacaatggacacatttttaaaatcaagggctgcatcgatctcatccatgaagtacagag 2843

                                                   
Query: 486  gagttggtttataatggtgaagagcaaacactagagcca 524
            |||| ||||| || |||||||||||||| |||| |||||
Sbjct: 2842 gagtgggtttgtagtggtgaagagcaaatactaaagcca 2804

---

>ref|XM_657109.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4597.2), mRNA
          Length = 4431

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                              
Query: 536  gtcttctcgccaccagataggttggcaatgttcttccagcttttcttggg 585
            ||||||||||||||||| |||||  |||||||||||||||| ||||||||
Sbjct: 4079 gtcttctcgccaccagacaggttaccaatgttcttccagctcttcttggg 4030

---

>emb|AJ299717.1|MAR299717 Microtus arvalis smc4 gene for SMC4 protein, exons 1-19
          Length = 23225

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 78/93 (83%)
 Strand = Plus / Minus

                                                                         
Query: 426   caacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatg 485
             ||||||| || ||||||||||||||||  |||||||| ||||| ||||| |  || |  |
Sbjct: 21023 caacaatcgacacatttttaaaatccagggctgcatcaatctcatccatgaagtagaggg 20964

                                              
Query: 486   gagttggtttataatggtgaagagcaaacacta 518
             |||| ||||| || |||||||||||||||||||
Sbjct: 20963 gagtgggtttgtagtggtgaagagcaaacacta 20931

---

>emb|AJ299713.1|MAR299713 Microtus arvalis partial mRNA for putative SMC4 protein (smc4 gene)
          Length = 3968

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 78/93 (83%)
 Strand = Plus / Minus

                                                                        
Query: 426  caacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatg 485
            ||||||| || ||||||||||||||||  |||||||| ||||| ||||| |  || |  |
Sbjct: 3565 caacaatcgacacatttttaaaatccagggctgcatcaatctcatccatgaagtagaggg 3506

                                             
Query: 486  gagttggtttataatggtgaagagcaaacacta 518
            |||| ||||| || |||||||||||||||||||
Sbjct: 3505 gagtgggtttgtagtggtgaagagcaaacacta 3473

---

>emb|AM236222.1| Microtus arvalis mRNA for structural maintenance of chromosome 4
            protein (smc4 gene)
          Length = 4218

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 78/93 (83%)
 Strand = Plus / Minus

                                                                        
Query: 426  caacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatg 485
            ||||||| || ||||||||||||||||  |||||||| ||||| ||||| |  || |  |
Sbjct: 3815 caacaatcgacacatttttaaaatccagggctgcatcaatctcatccatgaagtagaggg 3756

                                             
Query: 486  gagttggtttataatggtgaagagcaaacacta 518
            |||| ||||| || |||||||||||||||||||
Sbjct: 3755 gagtgggtttgtagtggtgaagagcaaacacta 3723

---

>gb|AY915495.1| Schistosoma japonicum SJCHGC07135 protein mRNA, partial cds
          Length = 429

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                       
Query: 425 ccaacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaat 484
           ||||||||||| ||||||||||| || | ||||||||| ||||| ||||| ||||| |||
Sbjct: 190 ccaacaatggagacatttttaaactctagtgctgcatcaatctcatccatgacatataat 131

                               
Query: 485 ggagttggtttataatggtg 504
           || || || || ||||||||
Sbjct: 130 ggtgtcggcttgtaatggtg 111

---

>ref|XM_871863.1| PREDICTED: Bos taurus SMC4 structural maintenance of chromosomes
            4-like 1 (yeast), transcript variant 5 (SMC4L1), mRNA
          Length = 6435

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Minus

                                                                        
Query: 426  caacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatg 485
            ||||||| || |||||||| ||||| |  |||||||| ||||| ||||| |  ||||  |
Sbjct: 3709 caacaatagaaacatttttgaaatcaagggctgcatcaatctcatccatgaagtacaggg 3650

                                                   
Query: 486  gagttggtttataatggtgaagagcaaacactagagcca 524
            |||| |||||||| || |||||||||||||||| |||||
Sbjct: 3649 gagtgggtttatagtgatgaagagcaaacactaaagcca 3611

---

>ref|XM_871771.1| PREDICTED: Bos taurus SMC4 structural maintenance of chromosomes
            4-like 1 (yeast), transcript variant 4 (SMC4L1), mRNA
          Length = 6349

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Minus

                                                                        
Query: 426  caacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatg 485
            ||||||| || |||||||| ||||| |  |||||||| ||||| ||||| |  ||||  |
Sbjct: 3623 caacaatagaaacatttttgaaatcaagggctgcatcaatctcatccatgaagtacaggg 3564

                                                   
Query: 486  gagttggtttataatggtgaagagcaaacactagagcca 524
            |||| |||||||| || |||||||||||||||| |||||
Sbjct: 3563 gagtgggtttatagtgatgaagagcaaacactaaagcca 3525

---

>ref|XM_871674.1| PREDICTED: Bos taurus SMC4 structural maintenance of chromosomes
            4-like 1 (yeast), transcript variant 3 (SMC4L1), mRNA
          Length = 6177

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Minus

                                                                        
Query: 426  caacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatg 485
            ||||||| || |||||||| ||||| |  |||||||| ||||| ||||| |  ||||  |
Sbjct: 3451 caacaatagaaacatttttgaaatcaagggctgcatcaatctcatccatgaagtacaggg 3392

                                                   
Query: 486  gagttggtttataatggtgaagagcaaacactagagcca 524
            |||| |||||||| || |||||||||||||||| |||||
Sbjct: 3391 gagtgggtttatagtgatgaagagcaaacactaaagcca 3353

---

>ref|XM_586752.2| PREDICTED: Bos taurus SMC4 structural maintenance of chromosomes
           4-like 1 (yeast), transcript variant 1 (SMC4L1), mRNA
          Length = 3560

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Minus

                                                                       
Query: 426 caacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatg 485
           ||||||| || |||||||| ||||| |  |||||||| ||||| ||||| |  ||||  |
Sbjct: 834 caacaatagaaacatttttgaaatcaagggctgcatcaatctcatccatgaagtacaggg 775

                                                  
Query: 486 gagttggtttataatggtgaagagcaaacactagagcca 524
           |||| |||||||| || |||||||||||||||| |||||
Sbjct: 774 gagtgggtttatagtgatgaagagcaaacactaaagcca 736

---

>ref|XM_863831.1| PREDICTED: Bos taurus SMC4 structural maintenance of chromosomes
            4-like 1 (yeast), transcript variant 2 (SMC4L1), mRNA
          Length = 6493

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Minus

                                                                        
Query: 426  caacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatg 485
            ||||||| || |||||||| ||||| |  |||||||| ||||| ||||| |  ||||  |
Sbjct: 3767 caacaatagaaacatttttgaaatcaagggctgcatcaatctcatccatgaagtacaggg 3708

                                                   
Query: 486  gagttggtttataatggtgaagagcaaacactagagcca 524
            |||| |||||||| || |||||||||||||||| |||||
Sbjct: 3707 gagtgggtttatagtgatgaagagcaaacactaaagcca 3669

---

>emb|CR478286.10| Zebrafish DNA sequence from clone CH211-196B13 in linkage group 15,
             complete sequence
          Length = 188644

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Plus

                                                                         
Query: 506   agagcaaacactagagccagggagctgagcgtcttctcgccaccagataggttggcaatg 565
             ||||||||||| || ||||| ||||||||||||||||| || ||||| || ||    || 
Sbjct: 81633 agagcaaacaccagcgccagagagctgagcgtcttctctcctccagacagattatagatc 81692

                                                    
Query: 566   ttcttccagcttttcttgggaggtcttacactgaaaaca 604
             ||||||||||| ||||| || || | |||||||||||||
Sbjct: 81693 ttcttccagctcttctttgggggacgtacactgaaaaca 81731

---

>gb|U13673.1|XLU13673 Xenopus laevis (XCAP-C) mRNA, complete cds
          Length = 4505

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 124/155 (80%)
 Strand = Plus / Minus

                                                                        
Query: 428  acaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatgga 487
            ||||||||||||||||| || ||||| ||||| || || || ||||| |  || | ||| 
Sbjct: 4003 acaatggatacatttttgaagtccaaagctgcgtcgatttcatccatgaagtaaagtggt 3944

                                                                        
Query: 488  gttggtttataatggtgaagagcaaacactagagccagggagctgagcgtcttctcgcca 547
            |||||||| ||||||||||||||||| || || ||||  || || || || ||||| |||
Sbjct: 3943 gttggtttgtaatggtgaagagcaaataccagcgccaaagaactcagtgttttctcacca 3884

                                               
Query: 548  ccagataggttggcaatgttcttccagcttttctt 582
            || || ||||||   || ||||||||||| |||||
Sbjct: 3883 cctgacaggttgaatattttcttccagctcttctt 3849



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                       
Query: 356  tcaaacatgttgtttctcagactaataattatgaactgagcat 398
            ||||||||||||||||| |||   |||||||||||||| ||||
Sbjct: 4075 tcaaacatgttgtttcttagagatataattatgaactgggcat 4033

---

>emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces
              hansenii
          Length = 1349926

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                          
Query: 426    caacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatg 485
              ||||||| || |||||| ||||||| ||||| ||||| || || ||||| ||||| ||||
Sbjct: 627869 caacaatcgaaacatttctaaaatctaatgcagcatcaatttcatccatgacatataatg 627810

                        
Query: 486    gagttggttt 495
              ||||||||||
Sbjct: 627809 gagttggttt 627800



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                          
Query: 426    caacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatg 485
              ||||||| || |||||| ||| ||| ||||| ||||| || || ||||| ||||| ||||
Sbjct: 629980 caacaatcgagacatttctaagatctaatgcagcatcaatttcatccatgacatataatg 629921

                        
Query: 486    gagttggttt 495
              ||||||||||
Sbjct: 629920 gagttggttt 629911

---

>ref|XM_391120.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG10944.1)
            partial mRNA
          Length = 4482

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 125/157 (79%)
 Strand = Plus / Minus

                                                                        
Query: 446  aaatccaatgctgcatctatctcgtccataacatacaatggagttggtttataatggtga 505
            |||||||| || ||||| ||||||||||| |||||||  |||||||| || || ||||| 
Sbjct: 4235 aaatccaacgcggcatcgatctcgtccatgacatacagaggagttggcttgtagtggtgc 4176

                                                                        
Query: 506  agagcaaacactagagccagggagctgagcgtcttctcgccaccagataggttggcaatg 565
            || || || || ||||||||   ||| || ||||| || ||||| || ||||||   |||
Sbjct: 4175 agggcgaaaacaagagccagactgctcagtgtcttttcaccacctgaaaggttgctgatg 4116

                                                 
Query: 566  ttcttccagcttttcttgggaggtcttacactgaaaa 602
            |||||||| || |||||||| ||  | ||||||||||
Sbjct: 4115 ttcttccaactcttcttgggcggcatgacactgaaaa 4079

---

>emb|AL929352.1|PFA929352 Plasmodium falciparum strain 3D7, chromosome 5, segment 2/4
          Length = 313050

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                         
Query: 434   gatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatggagttggt 493
             ||||||||||||||||| | ||||||||| || || ||||||| ||| | |||| |||||
Sbjct: 38932 gatacatttttaaaatcaagtgctgcatcaatttcatccataaaataaattggatttggt 38873

                                      
Query: 494   ttataatggtgaagagcaaacacta 518
             ||| |||  || |||||||| ||||
Sbjct: 38872 ttaaaataatgtagagcaaatacta 38848

---

>ref|XM_665940.1| Plasmodium berghei strain ANKA hypothetical protein (PB000786.03.0)
           partial mRNA
          Length = 261

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 437 acatttttaaaatccaatgctgcatctatctcgtccataa 476
           |||||||||||||| || ||||||||||| ||||||||||
Sbjct: 62  acatttttaaaatctaaagctgcatctatttcgtccataa 23

---

>ref|XM_396862.2| PREDICTED: Apis mellifera similar to SMC4 protein (LOC413418), mRNA
          Length = 3939

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 70/84 (83%)
 Strand = Plus / Minus

                                                                        
Query: 418  ataatgtccaacaatggatacatttttaaaatccaatgctgcatctatctcgtccataac 477
            ||||| |||||| || || |||||||||||||| || || ||||||||||| ||||||| 
Sbjct: 3612 ataatttccaactattgaaacatttttaaaatctaaggcagcatctatctcatccataaa 3553

                                    
Query: 478  atacaatggagttggtttataatg 501
             || || || || |||||||||||
Sbjct: 3552 gtataaaggggtcggtttataatg 3529

---

>ref|XM_516851.1| PREDICTED: Pan troglodytes SMC4 structural maintenance of chromosomes
            4-like 1 (LOC460821), mRNA
          Length = 2954

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 81/99 (81%)
 Strand = Plus / Minus

                                                                        
Query: 426  caacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatg 485
            |||||||||| |||||||||||||| |  |||||||| ||||| ||||| |  || |  |
Sbjct: 2787 caacaatggacacatttttaaaatcaagggctgcatcaatctcatccatgaagtaaaggg 2728

                                                   
Query: 486  gagttggtttataatggtgaagagcaaacactagagcca 524
            |||| || || || |||||||||||||| |||| |||||
Sbjct: 2727 gagtgggcttgtagtggtgaagagcaaatactaaagcca 2689

---

>ref|XM_360835.1| Magnaporthe grisea 70-15 hypothetical protein (MG03378.4) partial
            mRNA
          Length = 4491

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 105/131 (80%)
 Strand = Plus / Minus

                                                                        
Query: 458  gcatctatctcgtccataacatacaatggagttggtttataatggtgaagagcaaacact 517
            ||||| || |||||||| |||||||  || ||||| || || || || |||||||| || 
Sbjct: 4259 gcatcgatttcgtccatgacatacagcggcgttggcttgtagtgatgcagagcaaaaacc 4200

                                                                        
Query: 518  agagccagggagctgagcgtcttctcgccaccagataggttggcaatgttcttccagctt 577
            || |||||   ||| ||||||||||| |||||||| | ||||  ||||||||||||   |
Sbjct: 4199 agcgccagactgctcagcgtcttctcaccaccagacaagttgctaatgttcttccacgat 4140

                       
Query: 578  ttcttgggagg 588
            |||||||||||
Sbjct: 4139 ttcttgggagg 4129

---

>ref|NM_005496.3| Homo sapiens SMC4 structural maintenance of chromosomes 4-like 1
            (yeast) (SMC4L1), transcript variant 1, mRNA
          Length = 5297

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 81/99 (81%)
 Strand = Plus / Minus

                                                                        
Query: 426  caacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatg 485
            |||||||||| |||||||||||||| |  |||||||| ||||| ||||| |  || |  |
Sbjct: 3968 caacaatggacacatttttaaaatcaagggctgcatcaatctcatccatgaagtaaaggg 3909

                                                   
Query: 486  gagttggtttataatggtgaagagcaaacactagagcca 524
            |||| || || || |||||||||||||| |||| |||||
Sbjct: 3908 gagtgggcttgtagtggtgaagagcaaatactaaagcca 3870

---

>ref|NM_001002800.1| Homo sapiens SMC4 structural maintenance of chromosomes 4-like 1
            (yeast) (SMC4L1), transcript variant 2, mRNA
          Length = 5142

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 81/99 (81%)
 Strand = Plus / Minus

                                                                        
Query: 426  caacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatg 485
            |||||||||| |||||||||||||| |  |||||||| ||||| ||||| |  || |  |
Sbjct: 3813 caacaatggacacatttttaaaatcaagggctgcatcaatctcatccatgaagtaaaggg 3754

                                                   
Query: 486  gagttggtttataatggtgaagagcaaacactagagcca 524
            |||| || || || |||||||||||||| |||| |||||
Sbjct: 3753 gagtgggcttgtagtggtgaagagcaaatactaaagcca 3715

---

>ref|NM_001002799.1| Homo sapiens SMC4 structural maintenance of chromosomes 4-like 1
            (yeast) (SMC4L1), transcript variant 3, mRNA
          Length = 5071

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 81/99 (81%)
 Strand = Plus / Minus

                                                                        
Query: 426  caacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatg 485
            |||||||||| |||||||||||||| |  |||||||| ||||| ||||| |  || |  |
Sbjct: 3742 caacaatggacacatttttaaaatcaagggctgcatcaatctcatccatgaagtaaaggg 3683

                                                   
Query: 486  gagttggtttataatggtgaagagcaaacactagagcca 524
            |||| || || || |||||||||||||| |||| |||||
Sbjct: 3682 gagtgggcttgtagtggtgaagagcaaatactaaagcca 3644

---

>emb|BX537987.1|HSM806120 Homo sapiens mRNA; cDNA DKFZp686N1030 (from clone DKFZp686N1030)
          Length = 5041

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 81/99 (81%)
 Strand = Plus / Plus

                                                                        
Query: 426  caacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatg 485
            |||||||||| |||||||||||||| |  |||||||| ||||| ||||| |  || |  |
Sbjct: 3864 caacaatggacacatttttaaaatcaagggctgcatcaatctcatccatgaagtaaaggg 3923

                                                   
Query: 486  gagttggtttataatggtgaagagcaaacactagagcca 524
            |||| || || || |||||||||||||| |||| |||||
Sbjct: 3924 gagtgggcttgtagtggtgaagagcaaatactaaagcca 3962

---

>emb|AL833949.1|HSM805132 Homo sapiens mRNA; cDNA DKFZp434N2050 (from clone DKFZp434N2050)
          Length = 5042

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 81/99 (81%)
 Strand = Plus / Minus

                                                                        
Query: 426  caacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatg 485
            |||||||||| |||||||||||||| |  |||||||| ||||| ||||| |  || |  |
Sbjct: 4685 caacaatggacacatttttaaaatcaagggctgcatcaatctcatccatgaagtaaaggg 4626

                                                   
Query: 486  gagttggtttataatggtgaagagcaaacactagagcca 524
            |||| || || || |||||||||||||| |||| |||||
Sbjct: 4625 gagtgggcttgtagtggtgaagagcaaatactaaagcca 4587

---

>emb|AL136877.1|HSM801845 Homo sapiens mRNA; cDNA DKFZp434F205 (from clone DKFZp434F205)
          Length = 5261

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 81/99 (81%)
 Strand = Plus / Minus

                                                                        
Query: 426  caacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatg 485
            |||||||||| |||||||||||||| |  |||||||| ||||| ||||| |  || |  |
Sbjct: 3932 caacaatggacacatttttaaaatcaagggctgcatcaatctcatccatgaagtaaaggg 3873

                                                   
Query: 486  gagttggtttataatggtgaagagcaaacactagagcca 524
            |||| || || || |||||||||||||| |||| |||||
Sbjct: 3872 gagtgggcttgtagtggtgaagagcaaatactaaagcca 3834

---

>gb|AC024221.23| Homo sapiens 3 BAC RP11-227J5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 132953

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 81/99 (81%)
 Strand = Plus / Minus

                                                                         
Query: 426   caacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatg 485
             |||||||||| |||||||||||||| |  |||||||| ||||| ||||| |  || |  |
Sbjct: 77977 caacaatggacacatttttaaaatcaagggctgcatcaatctcatccatgaagtaaaggg 77918

                                                    
Query: 486   gagttggtttataatggtgaagagcaaacactagagcca 524
             |||| || || || |||||||||||||| |||| |||||
Sbjct: 77917 gagtgggcttgtagtggtgaagagcaaatactaaagcca 77879

---

>gb|AY099521.1| Danio rerio structural maintenance of chromosomes family member
            SMC4-like protein 1 (smc4l1) mRNA, complete cds
          Length = 4223

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 78/95 (82%)
 Strand = Plus / Minus

                                                                        
Query: 506  agagcaaacactagagccagggagctgagcgtcttctcgccaccagataggttggcaatg 565
            ||||||||||| || ||||| ||||||||||||||||| || ||||| || ||    || 
Sbjct: 3808 agagcaaacaccagcgccagagagctgagcgtcttctctcctccagacagattatagatc 3749

                                               
Query: 566  ttcttccagcttttcttgggaggtcttacactgaa 600
            ||||||||||| ||||| || || | |||||||||
Sbjct: 3748 ttcttccagctcttctttggggggcgtacactgaa 3714

---

>dbj|AK128143.1| Homo sapiens cDNA FLJ46264 fis, clone TESTI4026080, highly  similar
            to Homo sapiens SMC4 structural maintenance of
            chromosomes 4-like 1 (yeast) (SMC4L1)
          Length = 3998

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 81/99 (81%)
 Strand = Plus / Minus

                                                                        
Query: 426  caacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatg 485
            |||||||||| |||||||||||||| |  |||||||| ||||| ||||| |  || |  |
Sbjct: 3730 caacaatggacacatttttaaaatcaagggctgcatcaatctcatccatgaagtaaaggg 3671

                                                   
Query: 486  gagttggtttataatggtgaagagcaaacactagagcca 524
            |||| || || || |||||||||||||| |||| |||||
Sbjct: 3670 gagtgggcttgtagtggtgaagagcaaatactaaagcca 3632

---

>dbj|AK122939.1| Homo sapiens cDNA FLJ16648 fis, clone TESTI4035508, highly  similar
            to Homo sapiens SMC4 structural maintenance of
            chromosomes 4-like 1 (yeast) (SMC4L1)
          Length = 4236

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 81/99 (81%)
 Strand = Plus / Minus

                                                                        
Query: 426  caacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatg 485
            |||||||||| |||||||||||||| |  |||||||| ||||| ||||| |  || |  |
Sbjct: 2924 caacaatggacacatttttaaaatcaagggctgcatcaatctcatccatgaagtaaaggg 2865

                                                   
Query: 486  gagttggtttataatggtgaagagcaaacactagagcca 524
            |||| || || || |||||||||||||| |||| |||||
Sbjct: 2864 gagtgggcttgtagtggtgaagagcaaatactaaagcca 2826

---

>emb|CR600091.1| full-length cDNA clone CS0DJ006YF03 of T cells (Jurkat cell line)
           Cot 10-normalized of Homo sapiens (human)
          Length = 1804

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 81/99 (81%)
 Strand = Plus / Minus

                                                                       
Query: 426 caacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatg 485
           |||||||||| |||||||||||||| |  |||||||| ||||| ||||| |  || |  |
Sbjct: 525 caacaatggacacatttttaaaatcaagggctgcatcaatctcatccatgaagtaaaggg 466

                                                  
Query: 486 gagttggtttataatggtgaagagcaaacactagagcca 524
           |||| || || || |||||||||||||| |||| |||||
Sbjct: 465 gagtgggcttgtagtggtgaagagcaaatactaaagcca 427

---

>dbj|AB179361.1| Macaca fascicularis testis cDNA clone: QtsA-18303, similar to human
            SMC4 structural maintenance of chromosomes 4-like
            1(yeast) (SMC4L1), mRNA, RefSeq: NM_005496.2
          Length = 2295

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 81/99 (81%)
 Strand = Plus / Minus

                                                                        
Query: 426  caacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatg 485
            |||||||||| |||||||||||||| |  |||||||| ||||| ||||| |  || |  |
Sbjct: 1006 caacaatggacacatttttaaaatcaagggctgcatcaatctcatccatgaagtaaaggg 947

                                                   
Query: 486  gagttggtttataatggtgaagagcaaacactagagcca 524
            |||| || || || |||||||||||||| |||| |||||
Sbjct: 946  gagtgggcttgtagtggtgaagagcaaatactaaagcca 908

---

>gb|AF092564.1|AF092564 Homo sapiens chromosome-associated protein-C (hCAP-C) mRNA, partial
            cds
          Length = 3799

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 81/99 (81%)
 Strand = Plus / Minus

                                                                        
Query: 426  caacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatg 485
            |||||||||| |||||||||||||| |  |||||||| ||||| ||||| |  || |  |
Sbjct: 3442 caacaatggacacatttttaaaatcaagggctgcatcaatctcatccatgaagtaaaggg 3383

                                                   
Query: 486  gagttggtttataatggtgaagagcaaacactagagcca 524
            |||| || || || |||||||||||||| |||| |||||
Sbjct: 3382 gagtgggcttgtagtggtgaagagcaaatactaaagcca 3344

---

>ref|NM_173253.1| Danio rerio MC4 structural maintenance of chromosomes 4-like 1
            (yeast) (smc4l1), mRNA
          Length = 4223

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 78/95 (82%)
 Strand = Plus / Minus

                                                                        
Query: 506  agagcaaacactagagccagggagctgagcgtcttctcgccaccagataggttggcaatg 565
            ||||||||||| || ||||| ||||||||||||||||| || ||||| || ||    || 
Sbjct: 3808 agagcaaacaccagcgccagagagctgagcgtcttctctcctccagacagattatagatc 3749

                                               
Query: 566  ttcttccagcttttcttgggaggtcttacactgaa 600
            ||||||||||| ||||| || || | |||||||||
Sbjct: 3748 ttcttccagctcttctttggggggcgtacactgaa 3714

---

>dbj|AB019987.1| Homo sapiens mRNA for chromosome-associated polypeptide-C, complete
            cds
          Length = 4086

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 81/99 (81%)
 Strand = Plus / Minus

                                                                        
Query: 426  caacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatg 485
            |||||||||| |||||||||||||| |  |||||||| ||||| ||||| |  || |  |
Sbjct: 3812 caacaatggacacatttttaaaatcaagggctgcatcaatctcatccatgaagtaaaggg 3753

                                                   
Query: 486  gagttggtttataatggtgaagagcaaacactagagcca 524
            |||| || || || |||||||||||||| |||| |||||
Sbjct: 3752 gagtgggcttgtagtggtgaagagcaaatactaaagcca 3714

---

>ref|XM_632638.1| Dictyostelium discoideum structural maintenance of chromosome protein
            (DDB0219935), partial mRNA
          Length = 4248

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                        
Query: 437  acatttttaaaatccaatgctgcatctatctcgtccataacatacaatggagttggttta 496
            |||||||||||||| || |||||||| || || ||||| ||||| |  | | ||||||||
Sbjct: 3986 acatttttaaaatctaaagctgcatcaatttcatccattacatagagagcatttggttta 3927

                                  
Query: 497  taatggtgaagagcaaacacta 518
            ||||| ||||| ||||| ||||
Sbjct: 3926 taatgatgaagtgcaaatacta 3905

---

>ref|XM_953474.1| Neurospora crassa OR74A hypothetical protein (NCU09063.1) partial
            mRNA
          Length = 4935

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                        
Query: 509  gcaaacactagagccagggagctgagcgtcttctcgccaccagataggttggcaatgttc 568
            |||||||| || ||||| || || | ||||||||||||||||  ||| || | ||| |||
Sbjct: 4541 gcaaacaccagcgccagagaactcaacgtcttctcgccaccacttagattagaaatattc 4482

                             
Query: 569  ttccagcttttcttggg 585
            |||||||| ||||||||
Sbjct: 4481 ttccagctcttcttggg 4465

---

>ref|XM_331454.1| Neurospora crassa OR74A hypothetical protein (NCU09063.1) partial
            mRNA
          Length = 4935

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 64/77 (83%)
 Strand = Plus / Minus

                                                                        
Query: 509  gcaaacactagagccagggagctgagcgtcttctcgccaccagataggttggcaatgttc 568
            |||||||| || ||||| || || | ||||||||||||||||  ||| || | ||| |||
Sbjct: 4541 gcaaacaccagcgccagagaactcaacgtcttctcgccaccacttagattagaaatattc 4482

                             
Query: 569  ttccagcttttcttggg 585
            |||||||| ||||||||
Sbjct: 4481 ttccagctcttcttggg 4465

---

>ref|NM_133786.3| Mus musculus SMC4 structural maintenance of chromosomes 4-like 1
            (yeast) (Smc4l1), mRNA
          Length = 4101

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 426  caacaatggatacatttttaaaatccaatgctgcatctatctcgtccat 474
            ||||||| || ||||||||||||||||  |||||||| ||||| |||||
Sbjct: 3818 caacaatagacacatttttaaaatccagagctgcatcaatctcatccat 3770

---

>ref|XM_904099.2| PREDICTED: Mus musculus similar to SMC4 structural maintenance of
           chromosomes 4-like 1 (LOC630556), mRNA
          Length = 850

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 426 caacaatggatacatttttaaaatccaatgctgcatctatctcgtccat 474
           ||||||| || ||||||||||||||||  |||||||| ||||| |||||
Sbjct: 580 caacaatagacacatttttaaaatccagagctgcatcaatctcatccat 532

---

>gb|BC005507.1| Mus musculus SMC4 structural maintenance of chromosomes 4-like 1
           (yeast), mRNA (cDNA clone IMAGE:3491533), partial cds
          Length = 665

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 426 caacaatggatacatttttaaaatccaatgctgcatctatctcgtccat 474
           ||||||| || ||||||||||||||||  |||||||| ||||| |||||
Sbjct: 388 caacaatagacacatttttaaaatccagagctgcatcaatctcatccat 340

---

>gb|BC061481.1| Mus musculus SMC4 structural maintenance of chromosomes 4-like 1
            (yeast), mRNA (cDNA clone MGC:70057 IMAGE:6512832),
            complete cds
          Length = 4097

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 426  caacaatggatacatttttaaaatccaatgctgcatctatctcgtccat 474
            ||||||| || ||||||||||||||||  |||||||| ||||| |||||
Sbjct: 3793 caacaatagacacatttttaaaatccagagctgcatcaatctcatccat 3745

---

>gb|AC122876.4| Mus musculus BAC clone RP23-113K14 from 3, complete sequence
          Length = 190123

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                               
Query: 426    caacaatggatacatttttaaaatccaatgctgcatctatctcgtccat 474
              ||||||| || ||||||||||||||||  |||||||| ||||| |||||
Sbjct: 168743 caacaatagacacatttttaaaatccagagctgcatcaatctcatccat 168695

---

>ref|XM_947501.1| Theileria annulata strain Ankara hypothetical protein (TA11440)
            partial mRNA
          Length = 4047

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                        
Query: 455  gctgcatctatctcgtccataacatacaatggagttggtttataatggtgaagagcaaac 514
            ||||| || ||||||||||||| |||||  ||  ||||||| || |||||||| ||||| 
Sbjct: 3836 gctgcgtcgatctcgtccataaaatacacagggtttggtttgtagtggtgaagcgcaaat 3777

                                         
Query: 515  actagagccagggagctgagcgtcttctc 543
            |||||||| || || || ||||| |||||
Sbjct: 3776 actagagcaagtgaacttagcgttttctc 3748

---

>gb|AC119847.12| Mus musculus chromosome 3, clone RP23-46L5, complete sequence
          Length = 227081

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                              
Query: 426   caacaatggatacatttttaaaatccaatgctgcatctatctcgtccat 474
             ||||||| || ||||||||||||||||  |||||||| ||||| |||||
Sbjct: 43750 caacaatagacacatttttaaaatccagagctgcatcaatctcatccat 43702

---

>emb|AJ534940.2|MMU534940 Mus musculus mRNA for SMC4 protein
          Length = 3861

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 426  caacaatggatacatttttaaaatccaatgctgcatctatctcgtccat 474
            ||||||| || ||||||||||||||||  |||||||| ||||| |||||
Sbjct: 3694 caacaatagacacatttttaaaatccagagctgcatcaatctcatccat 3646

---

>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011
          Length = 2505489

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                    
Query: 536     gtcttctcgccaccagataggttggcaatgttcttccagcttttcttgggagg 588
               |||||||| ||||| || | |||| |||||||||||||||| ||||| |||||
Sbjct: 1231409 gtcttctcaccaccggacaagttgccaatgttcttccagctcttcttcggagg 1231357

---

>dbj|AK049487.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:C430016J18 product:XCAP-C/SMC4
           HOMOLOG GLUON homolog [Drosophila melanogaster], full
           insert sequence
          Length = 1363

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 426 caacaatggatacatttttaaaatccaatgctgcatctatctcgtccat 474
           ||||||| || ||||||||||||||||  |||||||| ||||| |||||
Sbjct: 849 caacaatagacacatttttaaaatccagagctgcatcaatctcatccat 801

---

>gb|BC025542.1| Mus musculus SMC4 structural maintenance of chromosomes 4-like 1
           (yeast), mRNA (cDNA clone IMAGE:5253686), with apparent
           retained intron
          Length = 767

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 426 caacaatggatacatttttaaaatccaatgctgcatctatctcgtccat 474
           ||||||| || ||||||||||||||||  |||||||| ||||| |||||
Sbjct: 490 caacaatagacacatttttaaaatccagagctgcatcaatctcatccat 442

---

>gb|BC062939.1| Mus musculus SMC4 structural maintenance of chromosomes 4-like 1
            (yeast), mRNA (cDNA clone MGC:86128 IMAGE:6841276),
            complete cds
          Length = 4101

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 426  caacaatggatacatttttaaaatccaatgctgcatctatctcgtccat 474
            ||||||| || ||||||||||||||||  |||||||| ||||| |||||
Sbjct: 3818 caacaatagacacatttttaaaatccagagctgcatcaatctcatccat 3770

---

>ref|XM_726157.1| Plasmodium yoelii yoelii str. 17XNL chromosome assembly protein
            (PY03258) partial mRNA
          Length = 4392

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 437  acatttttaaaatccaatgctgcatctatctcgtccataa 476
            |||||||||||||| || ||||||||||| || |||||||
Sbjct: 4193 acatttttaaaatctaaagctgcatctatttcatccataa 4154

---

>emb|AL096797.1|SPBC146 S.pombe chromosome II cosmid c146
          Length = 33601

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 117/148 (79%)
 Strand = Plus / Plus

                                                                        
Query: 426  caacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatg 485
            ||||||| || || |||||||| || ||||| ||||| || ||||||||||| || || |
Sbjct: 3905 caacaatcgaaacgtttttaaagtctaatgcagcatcgatttcgtccataacgtataaag 3964

                                                                        
Query: 486  gagttggtttataatggtgaagagcaaacactagagccagggagctgagcgtcttctcgc 545
            |||| ||||| ||||  || |||||||| || || || || || || | ||||||||| |
Sbjct: 3965 gagtcggtttgtaattatgtagagcaaagacaagggctagagaacttaacgtcttctctc 4024

                                        
Query: 546  caccagataggttggcaatgttcttcca 573
            | || || ||||| |  |||||||||||
Sbjct: 4025 ctcccgaaaggttagatatgttcttcca 4052

---

>ref|NM_001021299.1| Schizosaccharomyces pombe 972h- condensin protein (SPBC146.03c),
            partial mRNA
          Length = 3975

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 117/148 (79%)
 Strand = Plus / Minus

                                                                        
Query: 426  caacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatg 485
            ||||||| || || |||||||| || ||||| ||||| || ||||||||||| || || |
Sbjct: 3817 caacaatcgaaacgtttttaaagtctaatgcagcatcgatttcgtccataacgtataaag 3758

                                                                        
Query: 486  gagttggtttataatggtgaagagcaaacactagagccagggagctgagcgtcttctcgc 545
            |||| ||||| ||||  || |||||||| || || || || || || | ||||||||| |
Sbjct: 3757 gagtcggtttgtaattatgtagagcaaagacaagggctagagaacttaacgtcttctctc 3698

                                        
Query: 546  caccagataggttggcaatgttcttcca 573
            | || || ||||| |  |||||||||||
Sbjct: 3697 ctcccgaaaggttagatatgttcttcca 3670

---

>dbj|D30788.1|YSPCUT3B Schizosaccharomyces pombe gene for cut3 protein, complete cds
          Length = 4350

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 117/148 (79%)
 Strand = Plus / Minus

                                                                        
Query: 426  caacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatg 485
            ||||||| || || |||||||| || ||||| ||||| || ||||||||||| || || |
Sbjct: 4042 caacaatcgaaacgtttttaaagtctaatgcagcatcgatttcgtccataacgtataaag 3983

                                                                        
Query: 486  gagttggtttataatggtgaagagcaaacactagagccagggagctgagcgtcttctcgc 545
            |||| ||||| ||||  || |||||||| || || || || || || | ||||||||| |
Sbjct: 3982 gagtcggtttgtaattatgtagagcaaagacaagggctagagaacttaacgtcttctctc 3923

                                        
Query: 546  caccagataggttggcaatgttcttcca 573
            | || || ||||| |  |||||||||||
Sbjct: 3922 ctcccgaaaggttagatatgttcttcca 3895

---

>ref|XM_759593.1| Theileria parva strain Muguga hypothetical protein (TP02_0117)
            partial mRNA
          Length = 4197

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                        
Query: 455  gctgcatctatctcgtccataacatacaatggagttggtttataatggtgaagagcaaac 514
            |||||||||||||| ||||||| |||||  ||  | ||||| || || ||||| ||||||
Sbjct: 3986 gctgcatctatctcatccataaaatacaccgggttcggtttgtagtgatgaagcgcaaac 3927

                       
Query: 515  actagagccag 525
            || ||||||||
Sbjct: 3926 accagagccag 3916

---

>ref|XM_962918.1| PREDICTED: Tribolium castaneum similar to CG11397-PA (LOC656381),
            mRNA
          Length = 3834

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 62/75 (82%)
 Strand = Plus / Minus

                                                                        
Query: 426  caacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatg 485
            |||||||||| ||||| |||||||| |  |||||||| ||||| ||||| ||||| |  |
Sbjct: 3607 caacaatggaaacattcttaaaatcgagagctgcatcaatctcatccatgacataaagag 3548

                           
Query: 486  gagttggtttataat 500
            | | |||||||||||
Sbjct: 3547 gtgatggtttataat 3533

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 594     cactgaaaacaacaccttctgaaaatg 620
               |||||||||||||| ||||||||||||
Sbjct: 6079709 cactgaaaacaacatcttctgaaaatg 6079683

---

>dbj|AP003977.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1006_A02
          Length = 175153

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 594   cactgaaaacaacaccttctgaaaatg 620
             |||||||||||||| ||||||||||||
Sbjct: 45191 cactgaaaacaacatcttctgaaaatg 45165

---

>dbj|AP003974.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1003_F05
          Length = 147472

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 594    cactgaaaacaacaccttctgaaaatg 620
              |||||||||||||| ||||||||||||
Sbjct: 100548 cactgaaaacaacatcttctgaaaatg 100522

---

>dbj|AB086076.1| Oryza sativa (indica cultivar-group) DNA, retroposon p-SINE1-r55
          Length = 700

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 594 cactgaaaacaacaccttctgaaaatg 620
           |||||||||||||| ||||||||||||
Sbjct: 300 cactgaaaacaacatcttctgaaaatg 274

---

>ref|XM_744259.1| Aspergillus fumigatus Af293 nuclear condensin complex subunit Smc4
            (Afu2g02170) partial mRNA
          Length = 4275

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 70/86 (81%)
 Strand = Plus / Minus

                                                                        
Query: 428  acaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaatgga 487
            |||||||| || ||| | || ||||| || ||||| ||||||||||| || ||||  |||
Sbjct: 4163 acaatggagacgtttctgaagtccaaagccgcatcaatctcgtccatcacgtacagagga 4104

                                      
Query: 488  gttggtttataatggtgaagagcaaa 513
            || || || ||||||||||| |||||
Sbjct: 4103 gtgggcttgtaatggtgaagcgcaaa 4078



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                     
Query: 532  gagcgtcttctcgccaccagataggttggcaatgttcttccagcttttcttgggagg 588
            |||||| ||||||||||| || | |||  |||| ||||||||||| ||||| |||||
Sbjct: 4059 gagcgttttctcgccaccggacaagttaccaatattcttccagctcttcttcggagg 4003

---

>ref|XM_649656.1| Entamoeba histolytica HM-1:IMSS SMC4 protein (45.t00015) partial mRNA
          Length = 3681

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                      
Query: 444  taaaatccaatgctgcatctatctcgtccataacatacaatggagttggtttataatg 501
            ||||||| || || |||||||| || ||||||||||| | ||| |||||||| |||||
Sbjct: 3499 taaaatctaacgcagcatctatttcatccataacataaattggtgttggtttgtaatg 3442

---

>gb|AC115622.2| Homo sapiens BAC clone RP11-404I7 from 4, complete sequence
          Length = 164545

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 422   tgtccaacaatggatacatttttaaa 447
             |||||| |||||||||||||||||||
Sbjct: 77106 tgtccatcaatggatacatttttaaa 77131

---

>gb|AC060765.5|AC060765 Homo sapiens chromosome 8, clone RP11-653B10, complete sequence
          Length = 170392

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 436   tacatttttaaaatccaatgctgcat 461
             ||||||||||| ||||||||||||||
Sbjct: 36249 tacatttttaatatccaatgctgcat 36224

---

>gb|AC110751.5| Homo sapiens BAC clone RP13-511C16 from 4, complete sequence
          Length = 138824

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 422  tgtccaacaatggatacatttttaaa 447
            |||||| |||||||||||||||||||
Sbjct: 1236 tgtccatcaatggatacatttttaaa 1261

---

>gb|AC024558.21| Homo sapiens 3 BAC RP11-390G14 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 216161

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 12     gggaactagaaaatattagtga 33
              ||||||||||||||||||||||
Sbjct: 155205 gggaactagaaaatattagtga 155226

---

>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete
              sequence
          Length = 1507550

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 533    agcgtcttctcgccaccagataggttggcaatg 565
              |||||||| || |||||||| ||||||||||||
Sbjct: 272065 agcgtcttttcaccaccagacaggttggcaatg 272033

---

>gb|AC183678.2| Pan troglodytes BAC clone CH251-485O9 from chromosome 22, complete
             sequence
          Length = 209755

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 101   attcttacatgacaaaaaacc 121
             |||||||||||||||||||||
Sbjct: 84263 attcttacatgacaaaaaacc 84243

---

>gb|AC147648.4| Homo sapiens BAC clone RP11-1413M17 from UL, complete sequence
          Length = 188992

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 101    attcttacatgacaaaaaacc 121
              |||||||||||||||||||||
Sbjct: 164078 attcttacatgacaaaaaacc 164098

---

>ref|XM_711769.1| Candida albicans SC5314 putative nuclear condensin complex SMC ATPase
            (CaO19_8579), mRNA
          Length = 4107

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 607  accttctgaaaatggatctaa 627
            |||||||||||||||||||||
Sbjct: 3774 accttctgaaaatggatctaa 3754

---

>ref|XM_711709.1| Candida albicans SC5314 putative nuclear condensin complex SMC ATPase
            (CaO19_964), mRNA
          Length = 4107

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 607  accttctgaaaatggatctaa 627
            |||||||||||||||||||||
Sbjct: 3774 accttctgaaaatggatctaa 3754

---

>gb|AC145613.2| Homo sapiens BAC clone RP11-1266H24 from UL, complete sequence
          Length = 178925

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 101    attcttacatgacaaaaaacc 121
              |||||||||||||||||||||
Sbjct: 141212 attcttacatgacaaaaaacc 141232

---

>gb|AC145616.2| Homo sapiens BAC clone RP11-1172A19 from UL, complete sequence
          Length = 172810

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 101   attcttacatgacaaaaaacc 121
             |||||||||||||||||||||
Sbjct: 38151 attcttacatgacaaaaaacc 38131

---

>gb|AC142384.2| Homo sapiens chromosome 16 clone RP11-293B20, complete sequence
          Length = 182907

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 101    attcttacatgacaaaaaacc 121
              |||||||||||||||||||||
Sbjct: 168256 attcttacatgacaaaaaacc 168236

---

>gb|AC145547.3| Homo sapiens BAC clone RP11-1437O6 from UL, complete sequence
          Length = 185637

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 101    attcttacatgacaaaaaacc 121
              |||||||||||||||||||||
Sbjct: 110701 attcttacatgacaaaaaacc 110681

---

>emb|CR932234.1|CNS0KYIP Structural maintenance of chromosomes 3, Paramecium tetraurelia
            macronuclear gene
          Length = 4086

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 349  agctaattcaaacatgttgtt 369
            |||||||||||||||||||||
Sbjct: 3884 agctaattcaaacatgttgtt 3864

---

>ref|XM_571168.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
            (CNE00970) partial mRNA
          Length = 4745

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 533  agcgtcttctcgccaccagataggttggcaatg 565
            |||||||| || |||||||| ||||||||||||
Sbjct: 4220 agcgtcttttcaccaccagacaggttggcaatg 4188

---

>gb|AC144916.3| Homo sapiens BAC clone RP11-15L7 from UL, complete sequence
          Length = 158759

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 101    attcttacatgacaaaaaacc 121
              |||||||||||||||||||||
Sbjct: 145500 attcttacatgacaaaaaacc 145480

---

>gb|AC087386.7| Homo sapiens chromosome 15, clone RP11-173D3, complete sequence
          Length = 155343

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 101    attcttacatgacaaaaaacc 121
              |||||||||||||||||||||
Sbjct: 137397 attcttacatgacaaaaaacc 137417

---

>emb|CR381572.5| Human DNA sequence from clone bP-2168N6 on chromosome 21, complete
              sequence
          Length = 184355

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 101    attcttacatgacaaaaaacc 121
              |||||||||||||||||||||
Sbjct: 143944 attcttacatgacaaaaaacc 143924

---

>gb|AC123980.19| Pan troglodytes clone rp43-118j16, complete sequence
          Length = 145016

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 101   attcttacatgacaaaaaacc 121
             |||||||||||||||||||||
Sbjct: 10612 attcttacatgacaaaaaacc 10632

---

>gb|AC104248.3| Homo sapiens chromosome 8, clone RP11-1084E5, complete sequence
          Length = 200318

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 566    ttcttccagcttttcttggga 586
              |||||||||||||||||||||
Sbjct: 189371 ttcttccagcttttcttggga 189391

---

>gb|AC104945.4| Homo sapiens chromosome 8, clone RP11-384L9, complete sequence
          Length = 181328

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 566    ttcttccagcttttcttggga 586
              |||||||||||||||||||||
Sbjct: 166240 ttcttccagcttttcttggga 166220

---

>gb|AC087435.5| Homo sapiens chromosome 8, clone RP11-79O20, complete sequence
          Length = 158447

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 566   ttcttccagcttttcttggga 586
             |||||||||||||||||||||
Sbjct: 68446 ttcttccagcttttcttggga 68426

---

>gb|AC126335.16| Homo sapiens chromosome 15, clone RP11-854K16, complete sequence
          Length = 178738

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 101    attcttacatgacaaaaaacc 121
              |||||||||||||||||||||
Sbjct: 125759 attcttacatgacaaaaaacc 125779

---

>gb|AC139476.3| Homo sapiens chromosome 16 clone RP11-341P6, complete sequence
          Length = 189057

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 101   attcttacatgacaaaaaacc 121
             |||||||||||||||||||||
Sbjct: 62192 attcttacatgacaaaaaacc 62212

---

>gb|AC133548.2| Homo sapiens chromosome 16 clone RP11-17M15, complete sequence
          Length = 106288

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 101   attcttacatgacaaaaaacc 121
             |||||||||||||||||||||
Sbjct: 47465 attcttacatgacaaaaaacc 47445

---

>gb|AC009091.9| Homo sapiens chromosome 16 clone RP11-408D2, complete sequence
          Length = 156273

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 101   attcttacatgacaaaaaacc 121
             |||||||||||||||||||||
Sbjct: 96729 attcttacatgacaaaaaacc 96709

---

>gb|AC126603.9| Homo sapiens chromosome 15, clone RP11-492D6, complete sequence
          Length = 189363

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 101  attcttacatgacaaaaaacc 121
            |||||||||||||||||||||
Sbjct: 8723 attcttacatgacaaaaaacc 8743

---

>gb|AC145217.2| Homo sapiens BAC clone RP11-527C10 from 2, complete sequence
          Length = 138179

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 101   attcttacatgacaaaaaacc 121
             |||||||||||||||||||||
Sbjct: 91558 attcttacatgacaaaaaacc 91578

---

>gb|AC018696.4| Homo sapiens BAC clone RP11-575H3 from 2, complete sequence
          Length = 194995

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 101   attcttacatgacaaaaaacc 121
             |||||||||||||||||||||
Sbjct: 54332 attcttacatgacaaaaaacc 54312

---

>gb|AC116050.3| Homo sapiens BAC clone RP11-427F2 from 2, complete sequence
          Length = 165225

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 101   attcttacatgacaaaaaacc 121
             |||||||||||||||||||||
Sbjct: 20298 attcttacatgacaaaaaacc 20318

---

>gb|AC113612.3| Homo sapiens BAC clone RP11-433C18 from 2, complete sequence
          Length = 56549

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 101   attcttacatgacaaaaaacc 121
             |||||||||||||||||||||
Sbjct: 33834 attcttacatgacaaaaaacc 33814

---

>gb|AC136944.3| Homo sapiens chromosome 16 clone RP11-23E10, complete sequence
          Length = 142696

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 101   attcttacatgacaaaaaacc 121
             |||||||||||||||||||||
Sbjct: 93762 attcttacatgacaaaaaacc 93782

---

>gb|AC068279.6| Homo sapiens BAC clone RP11-153P14 from 2, complete sequence
          Length = 135351

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 101   attcttacatgacaaaaaacc 121
             |||||||||||||||||||||
Sbjct: 62184 attcttacatgacaaaaaacc 62164

---

>gb|AC133920.2| Homo sapiens chromosome 16 clone RP11-413O9, complete sequence
          Length = 197357

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 101    attcttacatgacaaaaaacc 121
              |||||||||||||||||||||
Sbjct: 161064 attcttacatgacaaaaaacc 161084



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 101   attcttacatgacaaaaaacc 121
             |||||||||||||||||||||
Sbjct: 48606 attcttacatgacaaaaaacc 48586

---

>gb|AC145614.3| Homo sapiens chromosome UNKNOWN clone RP11-1210E1, complete sequence
          Length = 188052

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 101   attcttacatgacaaaaaacc 121
             |||||||||||||||||||||
Sbjct: 44519 attcttacatgacaaaaaacc 44539

---

>gb|AC144898.3| Homo sapiens chromosome UNKNOWN clone RP11-247L13, complete sequence
          Length = 155112

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 101  attcttacatgacaaaaaacc 121
            |||||||||||||||||||||
Sbjct: 7539 attcttacatgacaaaaaacc 7559

---

>emb|BX546448.4| Human DNA sequence from clone RP11-509J10 on chromosome 22, complete
             sequence
          Length = 172149

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 101   attcttacatgacaaaaaacc 121
             |||||||||||||||||||||
Sbjct: 38718 attcttacatgacaaaaaacc 38738

---

>ref|NG_000002.1| Homo sapiens immunoglobulin lambda locus (IGL@) on chromosome 22
          Length = 909203

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 101    attcttacatgacaaaaaacc 121
              |||||||||||||||||||||
Sbjct: 261911 attcttacatgacaaaaaacc 261931

---

>dbj|AP001095.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-802O4, complete
             sequence
          Length = 187824

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 106   tacatgacaaaaaaccatctt 126
             |||||||||||||||||||||
Sbjct: 96130 tacatgacaaaaaaccatctt 96150

---

>dbj|AP000547.1| Homo sapiens genomic DNA, chromosome 22q11.2, Cat Eye Syndrome region,
             clone:KB67B5
          Length = 123288

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 101   attcttacatgacaaaaaacc 121
             |||||||||||||||||||||
Sbjct: 48668 attcttacatgacaaaaaacc 48648

---

>dbj|AP004284.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1268B10
          Length = 145226

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 566   ttcttccagcttttcttggga 586
             |||||||||||||||||||||
Sbjct: 39256 ttcttccagcttttcttggga 39276

---

>dbj|AP004580.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1461G7
          Length = 168155

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 566    ttcttccagcttttcttggga 586
              |||||||||||||||||||||
Sbjct: 167572 ttcttccagcttttcttggga 167592

---

>dbj|D87003.1| Homo sapiens immunoglobulin lambda gene locus DNA, clone:2H8
          Length = 43742

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 101   attcttacatgacaaaaaacc 121
             |||||||||||||||||||||
Sbjct: 22278 attcttacatgacaaaaaacc 22298

---

>dbj|AB051438.1| Homo sapiens mRNA for KIAA1651 protein, partial cds
          Length = 4852

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 101  attcttacatgacaaaaaacc 121
            |||||||||||||||||||||
Sbjct: 2035 attcttacatgacaaaaaacc 2015

---

>gb|AC145545.2| Homo sapiens chromosome UNKNOWN clone RP11-1365M9, complete sequence
          Length = 184813

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   attcttacatgacaaaaaac 120
             ||||||||||||||||||||
Sbjct: 93424 attcttacatgacaaaaaac 93405

---

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 265     gtttcagctctcggcaaagc 284
               ||||||||||||||||||||
Sbjct: 2956892 gtttcagctctcggcaaagc 2956873

---

>gb|AC142146.3| Mus musculus BAC clone RP24-74D8 from chromosome 9, complete sequence
          Length = 170429

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 591   ttacactgaaaacaacacct 610
             ||||||||||||||||||||
Sbjct: 64473 ttacactgaaaacaacacct 64492

---

>gb|AY579200.1| Tetrahymena thermophila condensin subunit (SMC4) mRNA, complete cds
          Length = 4473

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                        
Query: 425  ccaacaatggatacatttttaaaatccaatgctgcatctatctcgtccataacatacaat 484
            |||||||| |||||||| || ||||| || || ||||| || || |||||||  || |||
Sbjct: 4121 ccaacaattgatacattcttgaaatctaaggcagcatcgatttcatccataaagtataat 4062

                    
Query: 485  ggagttgg 492
            ||||||||
Sbjct: 4061 ggagttgg 4054

---

>gb|AC129778.5| Homo sapiens BAC clone RP11-1221G12 from UL, complete sequence
          Length = 236177

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    attcttacatgacaaaaaac 120
              ||||||||||||||||||||
Sbjct: 110126 attcttacatgacaaaaaac 110107

---

>gb|AC123924.4| Mus musculus BAC clone RP24-292A3 from chromosome 16, complete sequence
          Length = 159639

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 429   caatggatacatttttaaaa 448
             ||||||||||||||||||||
Sbjct: 18373 caatggatacatttttaaaa 18354

---

>gb|AC144508.3| Mus musculus BAC clone RP24-152C23 from chromosome 15, complete
             sequence
          Length = 155524

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 599   aaaacaacaccttctgaaaa 618
             ||||||||||||||||||||
Sbjct: 36523 aaaacaacaccttctgaaaa 36542

---

>gb|AC118240.8| Mus musculus chromosome 16, clone RP23-186J5, complete sequence
          Length = 222869

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 435   atacatttttaaaatccaat 454
             ||||||||||||||||||||
Sbjct: 47170 atacatttttaaaatccaat 47151

---

>ref|XM_663413.1| Cryptosporidium hominis TU502 stable maintenance of chromosomes;
            Smc4p (Chro.70215) partial mRNA
          Length = 3951

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 437  acatttttaaaatccaatgctgcatctatctcgtccataa 476
            |||||| |||| ||||  |||||||||| |||||||||||
Sbjct: 3701 acatttctaaagtccagggctgcatctacctcgtccataa 3662

---

>emb|BX284632.11| Human DNA sequence from clone RP11-460E7 on chromosome 9 Contains a
             gene similar to COBW-like protein (LOC55871), the FOXD4L4
             gene for forkhead box D4 like 4, an immunoglobulin kappa
             variable 1-5 (IGKV1-5) pseudogene, three novel
             pseudogenes, a pseudogene similar to part of tripartite
             motif-containing protein family, a pseudogene similar to
             part of BMS1-like, ribosome assembly protein (yeast)
             (BMS1L) and three CpG islands, complete sequence
          Length = 187806

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   attcttacatgacaaaaaac 120
             ||||||||||||||||||||
Sbjct: 37896 attcttacatgacaaaaaac 37877

---

>emb|AL845321.4| Human DNA sequence from clone RP11-236F9 on chromosome 9 Contains an
              aquaporin 7(AQP7) pseudogene, a novel gene, three novel
              pseudogenes, a pseudogene similar to part of BMS1-like,
              ribosome assembly protein (yeast)(BMS1L) and a CpG island,
              complete sequence
          Length = 158462

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    attcttacatgacaaaaaac 120
              ||||||||||||||||||||
Sbjct: 150231 attcttacatgacaaaaaac 150212

---

>emb|AL591379.18| Human DNA sequence from clone RP11-381O7 on chromosome 9 Contains an
             aquaporin 7 (AQP7) pseudogene, a novel gene, three novel
             pseudogenes, a pseudogene similar to part of BMS1-like,
             ribosome assembly protein (yeast) (BMS1L), a pseudogene
             similar to part of tripartite motif-containing family
             protein and a CpG island, complete sequence
          Length = 194491

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   attcttacatgacaaaaaac 120
             ||||||||||||||||||||
Sbjct: 27879 attcttacatgacaaaaaac 27898

---

>emb|AL512605.13| Human DNA sequence from clone RP11-15J10 on chromosome 9 Contains a
             pseudogene similar to part of COBW doamin family protein,
             the FOXD4L2 gene for forkhead box D4 like 2, an
             immunoglobulin kappa variable 1-5 (IGKV1-5) pseudogene,
             three novel pseudogenes, a pseudogene similar to part of
             cytochrome P450 family protein, a pseudogene similar to
             part of BMS1-like, ribosome assembly protein (yeast)
             (BMS1L) and four CpG islands, complete sequence
          Length = 158187

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   attcttacatgacaaaaaac 120
             ||||||||||||||||||||
Sbjct: 45660 attcttacatgacaaaaaac 45641

---

>emb|AL445665.20| Human DNA sequence from clone RP11-574E24 on chromosome 9 Contains an
            aquaporin 7 (AQP7) pseudogene and a CpG island, complete
            sequence
          Length = 179371

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 101  attcttacatgacaaaaaac 120
            ||||||||||||||||||||
Sbjct: 9044 attcttacatgacaaaaaac 9063

---

>emb|AL359955.25| Human DNA sequence from clone RP11-460N11 on chromosome 9 Contains a
             pseudogene similar to part of BMS1-like, ribosome assembly
             protein (yeast) (BMS1L) a immunoglobulin kappa variable
             1-5 (IGKV1-5) pseudogene, three novel pseudogenes, a zinc
             finger pseudogene, a pseudogene similar to tripartite
             motif-containing protein and two CpG islands, complete
             sequence
          Length = 165474

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   attcttacatgacaaaaaac 120
             ||||||||||||||||||||
Sbjct: 38104 attcttacatgacaaaaaac 38085

---

>emb|AL356499.16| Human DNA sequence from clone RP1-315J21 on chromosome X Contains the
             3' end of a novel gene, complete sequence
          Length = 142557

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 255   ggagttgttggtttcagctc 274
             ||||||||||||||||||||
Sbjct: 27473 ggagttgttggtttcagctc 27492

---

>emb|AL161423.9| Human DNA sequence from clone RP11-168J5 on chromosome 13 Contains a CpG
              island, complete sequence
          Length = 164786

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 427    aacaatggatacatttttaa 446
              ||||||||||||||||||||
Sbjct: 160761 aacaatggatacatttttaa 160742

---

>gb|AC131886.5| Rattus norvegicus 4 BAC CH230-53A1 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 222634

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 430    aatggatacatttttaaaat 449
              ||||||||||||||||||||
Sbjct: 146545 aatggatacatttttaaaat 146526

---

>emb|BX571714.7| Zebrafish DNA sequence from clone DKEY-16L2 in linkage group 3, complete
              sequence
          Length = 240105

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 355    ttcaaacatgttgtttctca 374
              ||||||||||||||||||||
Sbjct: 163055 ttcaaacatgttgtttctca 163074

---

>gb|AC090675.10| Homo sapiens 12 BAC RP11-681A17 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 174044

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 353   aattcaaacatgttgtttct 372
             ||||||||||||||||||||
Sbjct: 67865 aattcaaacatgttgtttct 67884

---

>gb|AC079919.5| Homo sapiens BAC clone RP11-291N5 from 4, complete sequence
          Length = 168311

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 474    taacatacaatggagttggt 493
              ||||||||||||||||||||
Sbjct: 102137 taacatacaatggagttggt 102118

---

>gb|AC026273.7| Homo sapiens BAC clone CTD-2314M3 from 2, complete sequence
          Length = 144645

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   attcttacatgacaaaaaac 120
             ||||||||||||||||||||
Sbjct: 82658 attcttacatgacaaaaaac 82639

---

>ref|XM_628360.1| Cryptosporidium parvum Iowa II SMC4'SMC4, (cgd7_1850), partial mRNA
          Length = 4101

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 437  acatttttaaaatccaatgctgcatctatctcgtccataa 476
            |||||| |||| ||||  |||||||||| |||||||||||
Sbjct: 3851 acatttctaaagtccagggctgcatctacctcgtccataa 3812

---

>gb|AC161372.2| Mus musculus BAC clone RP23-326G14 from chromosome 16, complete
             sequence
          Length = 208994

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 429   caatggatacatttttaaaa 448
             ||||||||||||||||||||
Sbjct: 66680 caatggatacatttttaaaa 66699

---

>gb|AC158635.6| Mus musculus 10 BAC RP23-396A23 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 183931

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 429    caatggatacatttttaaaa 448
              ||||||||||||||||||||
Sbjct: 170653 caatggatacatttttaaaa 170634

---

>gb|AC068339.6| Homo sapiens chromosome 11, clone RP11-328E22, complete sequence
          Length = 155491

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   ttcttacatgacaaaaaacc 121
             ||||||||||||||||||||
Sbjct: 69281 ttcttacatgacaaaaaacc 69262

---

>gb|AC019067.9| Homo sapiens BAC clone RP11-171B14 from 2, complete sequence
          Length = 169928

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     aggtgaccaaatgttctagc 88
              ||||||||||||||||||||
Sbjct: 111653 aggtgaccaaatgttctagc 111672

---

>gb|AC034151.6| Homo sapiens BAC clone RP11-168J1 from 2, complete sequence
          Length = 157666

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   attcttacatgacaaaaaac 120
             ||||||||||||||||||||
Sbjct: 62772 attcttacatgacaaaaaac 62753

---

>gb|AC128677.4| Homo sapiens BAC clone RP11-271A22 from 2, complete sequence
          Length = 158087

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   attcttacatgacaaaaaac 120
             ||||||||||||||||||||
Sbjct: 83365 attcttacatgacaaaaaac 83346

---

>emb|BX914207.15| Zebrafish DNA sequence from clone DKEY-158P11 in linkage group 4,
             complete sequence
          Length = 92140

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 436   tacatttttaaaatccaatg 455
             ||||||||||||||||||||
Sbjct: 83368 tacatttttaaaatccaatg 83387

---

>gb|AY870621.1| Natrix natrix voucher MNCN 13796 NADH dehydrogenase subunit 2 (ND2)
           gene, complete cds; mitochondrial
          Length = 1029

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 100 cattcttacatgacaaaaaa 119
           ||||||||||||||||||||
Sbjct: 384 cattcttacatgacaaaaaa 403

---

>gb|AY870620.1| Natrix natrix voucher MVZ 200534 NADH dehydrogenase subunit 2 (ND2)
           gene, complete cds; mitochondrial
          Length = 1029

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 100 cattcttacatgacaaaaaa 119
           ||||||||||||||||||||
Sbjct: 384 cattcttacatgacaaaaaa 403

---

>emb|AL928885.9| Zebrafish DNA sequence from clone CH211-195G24 in linkage group 3,
             complete sequence
          Length = 196857

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 355   ttcaaacatgttgtttctca 374
             ||||||||||||||||||||
Sbjct: 44834 ttcaaacatgttgtttctca 44853

---

>emb|CT025655.16| Mouse DNA sequence from clone RP23-429H3 on chromosome 9, complete
             sequence
          Length = 122239

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 591   ttacactgaaaacaacacct 610
             ||||||||||||||||||||
Sbjct: 76130 ttacactgaaaacaacacct 76149

---

>dbj|AP001214.3| Homo sapiens genomic DNA, chromosome 2p11.2, clone:cos138
          Length = 41157

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   attcttacatgacaaaaaac 120
             ||||||||||||||||||||
Sbjct: 26672 attcttacatgacaaaaaac 26653


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,439,106
Number of Sequences: 3902068
Number of extensions: 6439106
Number of successful extensions: 157208
Number of sequences better than 10.0: 161
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 156610
Number of HSP's gapped (non-prelim): 574
length of query: 660
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 637
effective length of database: 17,143,297,704
effective search space: 10920280637448
effective search space used: 10920280637448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---