ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags30j12 |
|---|---|
| Clone Library Name | barley_pub |
>YHI0_YEAST (P38708) Putative prolyl-tRNA synthetase YHR020W (EC 6.1.1.15)| (Proline--tRNA ligase) (ProRS) Length = 688 Score = 144 bits (362), Expect = 3e-34 Identities = 74/183 (40%), Positives = 107/183 (58%), Gaps = 13/183 (7%) Frame = -1 Query: 630 LNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKVDIP 451 L + GIRA D +NY+PGWK+SQ+E+KG+P+RIE+GPKD+ QV +VRR++ K + Sbjct: 506 LKKVGIRAFGDYNDNYTPGWKFSQYELKGIPIRIELGPKDIEKNQVVVVRRNDSKKYVVS 565 Query: 450 STDLVEQVRVLLDGIQANLLETAKAKRDACIVIISTWDEFIAALNDKKLILAPWCDEEEV 271 +L ++ +L+ +Q +L + AK D VI++ W F+ ALN K +ILAPWC E Sbjct: 566 FDELEARIPEILEEMQGDLFKKAKELFDTHRVIVNEWSGFVPALNKKNVILAPWCGVMEC 625 Query: 270 EKDVKART-------------KGELGAAKTLCTPFDQPDLPSGTVCFASGKPAQKWSFWG 130 E+D+K + K AK+LC PFDQP L G C + A + +G Sbjct: 626 EEDIKESSAKKDDGEEFEEDDKAPSMGAKSLCIPFDQPVLNEGQKCIKCERIAVNYCMFG 685 Query: 129 RSY 121 RSY Sbjct: 686 RSY 688
>SYEP_DROME (P28668) Bifunctional aminoacyl-tRNA synthetase [Includes:| Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase); Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA ligase)] Length = 1714 Score = 129 bits (323), Expect = 1e-29 Identities = 70/178 (39%), Positives = 107/178 (60%), Gaps = 12/178 (6%) Frame = -1 Query: 618 GIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKVDIPSTDL 439 G+R + D R+NYSPGWK++ WE+KGVPLR+E+GPKDL +Q+ VRRD K+ IP D+ Sbjct: 1538 GVRCEGDYRDNYSPGWKFNHWELKGVPLRLEVGPKDLKAQQLVAVRRDTVEKITIPLADV 1597 Query: 438 VEQVRVLLDGIQANLLETAKAKRDACIVIISTWDEFIAALNDKKLILAPWCDEEEVEKDV 259 +++ LL+ I ++L A+ + ++ W +F L K ++LAP+C E E + Sbjct: 1598 EKKIPALLETIHESMLNKAQEDMTSHTKKVTNWTDFCGFLEQKNILLAPFCGEISCEDKI 1657 Query: 258 KART----KGELGA----AKTLCTPFDQP-DLPSGTVCF---ASGKPAQKWSFWGRSY 121 KA + + E GA AK+LC PFDQP + + C + KP + ++ +GRSY Sbjct: 1658 KADSARGEEAEPGAPAMGAKSLCIPFDQPAPIAASDKCINPSCTNKP-KFYTLFGRSY 1714
>SYEP_MOUSE (Q8CGC7) Bifunctional aminoacyl-tRNA synthetase [Includes:| Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase); Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA ligase)] Length = 1512 Score = 119 bits (298), Expect = 8e-27 Identities = 66/176 (37%), Positives = 101/176 (57%), Gaps = 9/176 (5%) Frame = -1 Query: 621 AGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKVDIPSTD 442 A IR +D R+NYSPGWK++ WE+KGVP+R+E+GP+D+ + Q VRRD G K+ I + Sbjct: 1337 ANIRVRVDLRDNYSPGWKFNHWELKGVPVRLEVGPRDMKSCQFVAVRRDTGEKLTIAEKE 1396 Query: 441 LVEQVRVLLDGIQANLLETAKAKRDACIVIISTWDEFIAALNDKKLILAPWCDEEEVEKD 262 ++ +L+ IQ NL A +V+ +T ++F L+ K+ P+C E + E Sbjct: 1397 AEAKLEKVLEDIQLNLFTRASEDLKTHMVVSNTLEDFQKVLDAGKVAQIPFCGEIDCEDW 1456 Query: 261 VKARTKG----ELGA----AKTLCTPFDQ-PDLPSGTVCFASGKPAQKWSFWGRSY 121 +K T E GA AK+LC PF+ +L G +C PA+ ++ +GRSY Sbjct: 1457 IKKMTARDQDVEPGAPSMGAKSLCIPFNPLCELQPGAMCVCGKNPAKFYTLFGRSY 1512
>SYEP_HUMAN (P07814) Bifunctional aminoacyl-tRNA synthetase [Includes:| Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase); Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA ligase)] Length = 1440 Score = 119 bits (297), Expect = 1e-26 Identities = 64/179 (35%), Positives = 99/179 (55%), Gaps = 9/179 (5%) Frame = -1 Query: 630 LNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKVDIP 451 L IR D R+NYSPGWK++ WE+KGVP+R+E+GP+D+ + Q VRRD G K+ + Sbjct: 1262 LLSVNIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSCQFVAVRRDTGEKLTVA 1321 Query: 450 STDLVEQVRVLLDGIQANLLETAKAKRDACIVIISTWDEFIAALNDKKLILAPWCDEEEV 271 + +++ +L+ IQ L A +V+ +T ++F L+ K++ P+C E + Sbjct: 1322 ENEAETKLQAILEDIQVTLFTRASEDLKTHMVVANTMEDFQKILDSGKIVQIPFCGEIDC 1381 Query: 270 EKDVKARTKG----ELGA----AKTLCTPFDQ-PDLPSGTVCFASGKPAQKWSFWGRSY 121 E +K T E GA AK+LC PF +L G C PA+ ++ +GRSY Sbjct: 1382 EDWIKKTTARDQDLEPGAPSMGAKSLCIPFKPLCELQPGAKCVCGKNPAKYYTLFGRSY 1440
>SYP_CLOST (Q9L4Q8) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA| ligase) (ProRS) Length = 481 Score = 115 bits (289), Expect = 8e-26 Identities = 68/176 (38%), Positives = 94/176 (53%), Gaps = 6/176 (3%) Frame = -1 Query: 630 LNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKVDIP 451 L GIR LD NYSPGWK++Q+EMKGVPLR+EIGP+D+ N I RRD +K Sbjct: 318 LEAKGIRVTLDDDTNYSPGWKFNQYEMKGVPLRLEIGPRDIENNVAMIARRDTLSKDSYS 377 Query: 450 STDLVEQVRVLLDGIQANLLETAKAKRDACIVIISTWDEFIAALNDKKLILAP------W 289 ++ + V+ LLD + ++LE A+A RD+ ++EF +K+I P W Sbjct: 378 LDNIGDTVKNLLDTVHTDMLERARAHRDSKTFTFKDYEEF-----KRKMIETPGFAKGMW 432 Query: 288 CDEEEVEKDVKARTKGELGAAKTLCTPFDQPDLPSGTVCFASGKPAQKWSFWGRSY 121 C EEE E +K T C PF Q +L G C GKPA+ + ++Y Sbjct: 433 CGEEECEAKIKEDT-----GVTIRCIPFVQENL--GETCQFCGKPAKHMVYLAKAY 481
>SYP_MYCLE (Q9Z5I7) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA| ligase) (ProRS) Length = 480 Score = 90.5 bits (223), Expect = 4e-18 Identities = 54/142 (38%), Positives = 74/142 (52%), Gaps = 1/142 (0%) Frame = -1 Query: 630 LNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDL-ANKQVRIVRRDNGAKVDI 454 L AG+R +DAR +PGWKY++WE++GVP+R+E+GP+DL A V + R AK I Sbjct: 316 LQAAGVRTHVDARPQLTPGWKYNEWELRGVPIRLELGPRDLEAGTTVMVRRIGEKAKQPI 375 Query: 453 PSTDLVEQVRVLLDGIQANLLETAKAKRDACIVIISTWDEFIAALNDKKLILAPWCDEEE 274 ++ +L+ Q LLE A RD ++ WD F A LA C E Sbjct: 376 AIAAAPTELPGILEEFQRTLLERATQFRDDHTTLVDNWDAF-ATTVATGWALAIHCGNPE 434 Query: 273 VEKDVKARTKGELGAAKTLCTP 208 E+D+KA T AA C P Sbjct: 435 CEEDIKAET-----AATPRCVP 451
>SYPC_METJA (Q58635) Bifunctional aminoacyl-tRNA synthetase (ProCysRS)| (AATS-CysPro) [Includes: Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA ligase); Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA ligase)] Length = 455 Score = 85.1 bits (209), Expect = 2e-16 Identities = 53/140 (37%), Positives = 80/140 (57%), Gaps = 6/140 (4%) Frame = -1 Query: 639 VYTLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKV 460 +Y + R +D R+ PG K++ WE+KGVPLRIE+GPKD+ NK++ + RRD K Sbjct: 302 IYEKLKGKFRVHIDDRD-IRPGRKFNDWEIKGVPLRIEVGPKDIENKKITLFRRDTMEKF 360 Query: 459 DIPSTDLVEQVRVLLDGIQANLLETAKAKRDACIVIIS--TWDEFIAALNDKK-LILAPW 289 + T L+E V L+ I N+ A K + I I+ DE L++K+ +IL P+ Sbjct: 361 QVDETQLMEVVEKTLNNIMENIKNRAWEKFENFITILEDINPDEIKNILSEKRGVILVPF 420 Query: 288 CDE---EEVEKDVKARTKGE 238 +E EE+E+ V+A GE Sbjct: 421 KEEIYNEELEEKVEATILGE 440
>SYP_METTH (O26708) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA| ligase) (ProRS) Length = 482 Score = 82.0 bits (201), Expect = 1e-15 Identities = 50/133 (37%), Positives = 73/133 (54%), Gaps = 1/133 (0%) Frame = -1 Query: 630 LNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKVDIP 451 L AG R LD R+ G KY +WEM+GVPLR+EIGP+DL I RRD G KV Sbjct: 322 LEAAGFRVHLDDRD-IRAGRKYYEWEMRGVPLRVEIGPRDLEKGAAVISRRDTGEKVTAD 380 Query: 450 STDLVEQVRVLLDGIQANLLETAKAKRDACIVIISTWDEFIAALNDKKLILA-PWCDEEE 274 + E +R L+ I NL A + ++ I T +E +++K+ I++ WC EEE Sbjct: 381 LQGIEETLRELMKDILENLRTRAWERMESEIREAETLEEASRIVDEKRGIISFMWCGEEE 440 Query: 273 VEKDVKARTKGEL 235 DV+ + + ++ Sbjct: 441 CGMDVEEKVRVDI 453
>SYP_BORBU (O51363) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA| ligase) (ProRS) Length = 488 Score = 68.9 bits (167), Expect = 1e-11 Identities = 56/183 (30%), Positives = 85/183 (46%), Gaps = 10/183 (5%) Frame = -1 Query: 639 VYTLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGA-- 466 V L +A R ++D SPG+++S E KG+P+R+E+G D+ V I RRD Sbjct: 312 VDALKKAEFRVEIDKDVRSSPGFRFSSAEFKGIPIRLEVGINDVLLNSVTISRRDKDRKF 371 Query: 465 KVDIPSTDLVEQVRVLLDGIQANLLETAKAKRDACIVII-----STWDEFIAALND-KKL 304 K I L+ +V+V LD +Q +L + A R I +++ F A +ND Sbjct: 372 KYQISLDSLISKVKVELDLMQKDLFQRALNFRILNTKEIFRSSKDSYETFKAYVNDYSGF 431 Query: 303 ILAPWCDEEEVEKDVKARTKGELGAAKTLCTP--FDQPDLPSGTVCFASGKPAQKWSFWG 130 +L+ WC E +K TK A C P F DL +G C A+ + + Sbjct: 432 VLSCWCGSLNCENIIKNETK-----ATIRCIPDDFKARDL-TGMTCIYCSSKAKYFVLFA 485 Query: 129 RSY 121 +SY Sbjct: 486 KSY 488
>SYP_ARCFU (O28664) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA| ligase) (ProRS) Length = 575 Score = 51.2 bits (121), Expect = 3e-06 Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 1/66 (1%) Frame = -1 Query: 612 RADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVR-RDNGAKVDIPSTDLV 436 R LD E+ PG KY +WE+KGVP+R EIGP+D A K V +V RD K ++P D V Sbjct: 419 RVVLDEGED-RPGAKYYKWELKGVPIRFEIGPRD-AEKGVAVVSFRDEKRKFEVP-LDEV 475 Query: 435 EQVRVL 418 ++ +VL Sbjct: 476 DEGKVL 481
>SYT_CLOPE (Q8XI02) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 643 Score = 37.7 bits (86), Expect = 0.029 Identities = 20/71 (28%), Positives = 36/71 (50%) Frame = -1 Query: 639 VYTLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKV 460 V L + G+R + D R G+K + ++ P + +G K+ NK+V + R NG + Sbjct: 565 VEELRRRGVRVEADHRAE-KIGYKIREARLERTPYILVVGEKEAENKEVSVRSRKNGEEG 623 Query: 459 DIPSTDLVEQV 427 +P D V ++ Sbjct: 624 AMPLADFVNRI 634
>SYP_ECOLI (P16659) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA| ligase) (ProRS) (Global RNA synthesis factor) Length = 572 Score = 37.7 bits (86), Expect = 0.029 Identities = 23/66 (34%), Positives = 34/66 (51%) Frame = -1 Query: 630 LNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKVDIP 451 L GI LD R+ PG ++ E+ G+P I +G ++L N + R NG K I Sbjct: 500 LRAQGIEVLLDDRKE-RPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIK 558 Query: 450 STDLVE 433 + D+VE Sbjct: 559 TGDIVE 564
>SYP_RICPR (Q9ZDE7) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA| ligase) (ProRS) Length = 432 Score = 37.4 bits (85), Expect = 0.038 Identities = 21/61 (34%), Positives = 32/61 (52%) Frame = -1 Query: 606 DLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKVDIPSTDLVEQV 427 D DAR PG K++ ++ G P +I IGPK AN V + R G DI +++ + Sbjct: 371 DTDAR----PGSKFATHDLIGSPYQIIIGPKKAANNIVELKDRKTGVLEDIEVENIINYI 426 Query: 426 R 424 + Sbjct: 427 K 427
>SYT_IDILO (Q5QYN4) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 638 Score = 36.6 bits (83), Expect = 0.065 Identities = 23/71 (32%), Positives = 35/71 (49%) Frame = -1 Query: 639 VYTLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKV 460 V TLN+ GIRA D R N G+K + +K VP + +G K++ +V + R Sbjct: 559 VKTLNEKGIRASADLR-NEKIGFKIREHTLKRVPYLLVVGDKEVEAGEVAVRTRGGEDLG 617 Query: 459 DIPSTDLVEQV 427 P D + +V Sbjct: 618 KFPLEDFITRV 628
>SYT_STAEQ (Q5HNM1) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 645 Score = 35.0 bits (79), Expect = 0.19 Identities = 15/48 (31%), Positives = 30/48 (62%) Frame = -1 Query: 630 LNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRI 487 L G+R ++D R N G+K + +MK +P +I +G +++ N++V + Sbjct: 569 LKSQGVRVEIDDR-NEKMGYKIREAQMKKIPYQIVVGDQEVENQEVNV 615
>SYP_MYCPN (P75382) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA| ligase) (ProRS) Length = 483 Score = 34.7 bits (78), Expect = 0.25 Identities = 41/170 (24%), Positives = 69/170 (40%) Frame = -1 Query: 630 LNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKVDIP 451 L Q IR EN G + Q E+ G+P ++ + N R+ R + Sbjct: 327 LEQLAIRFQFIKVENQL-GKQLGQGEVNGIPFQLIVDNPQTVNIFNRLTRVKTAYSFEQL 385 Query: 450 STDLVEQVRVLLDGIQANLLETAKAKRDACIVIISTWDEFIAALNDKKLILAPWCDEEEV 271 ++ VE L+ + + AKA +V +T + A NDKK +L + + Sbjct: 386 ASRFVE----LVQQYHQAMYDKAKAVVQQKVVQATTLKQIEQAFNDKKAVLCAVRLTDTL 441 Query: 270 EKDVKARTKGELGAAKTLCTPFDQPDLPSGTVCFASGKPAQKWSFWGRSY 121 E+ +K R + T+ +Q P +C SG+ AQ + R+Y Sbjct: 442 EQQLKERYQ------VTVRCCLEQLQKPQ--ICPFSGESAQDYVLIARAY 483
>SYH_PYRAB (Q9UY31) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 431 Score = 34.7 bits (78), Expect = 0.25 Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%) Frame = -1 Query: 639 VYTLNQAGIRADLD-ARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAK 463 V L +AGIR+D++ + Y+ GV L I +G +DL V I ++G + Sbjct: 356 VTRLRKAGIRSDIELSGRKLRKALDYAN--RIGVRLSIIVGKRDLERGVVTIRDLESGNQ 413 Query: 462 VDIPSTDLVEQVRVLLD 412 V++P ++V +VR LL+ Sbjct: 414 VEVPVDNVVTKVRELLN 430
>SYP_HAEIN (P43830) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA| ligase) (ProRS) Length = 572 Score = 33.9 bits (76), Expect = 0.42 Identities = 21/66 (31%), Positives = 31/66 (46%) Frame = -1 Query: 633 TLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKVDI 454 TL G+ D R+ PG ++ E+ GVP + IG K+L N ++ R G K I Sbjct: 498 TLQSQGVDVIFDDRKE-RPGVMFADMELIGVPHMVVIGEKNLDNGEIEYKNRRTGEKEMI 556 Query: 453 PSTDLV 436 L+ Sbjct: 557 SKDKLL 562
>SYT_SHEON (Q8EER9) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 642 Score = 33.9 bits (76), Expect = 0.42 Identities = 17/50 (34%), Positives = 29/50 (58%) Frame = -1 Query: 624 QAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRD 475 + GIRA D R N G+K + ++ VP + +G +++ NK+V + RD Sbjct: 564 EQGIRASFDLR-NEKIGFKIREHTLRRVPYLLVVGDQEMENKEVAVRTRD 612
>SYH_MOUSE (Q61035) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 509 Score = 33.9 bits (76), Expect = 0.42 Identities = 22/72 (30%), Positives = 39/72 (54%) Frame = -1 Query: 639 VYTLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKV 460 V L AGI+A+L ++N + E G+PL IG ++L + +++ + +V Sbjct: 428 VSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVASREEV 487 Query: 459 DIPSTDLVEQVR 424 D+ DLVE++R Sbjct: 488 DVQREDLVEEIR 499
>SYT_FUSNN (Q8RFS6) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 620 Score = 33.5 bits (75), Expect = 0.55 Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 1/89 (1%) Frame = -1 Query: 630 LNQAGIRADLDARENYSPGWKYSQWEMK-GVPLRIEIGPKDLANKQVRIVRRDNGAKVDI 454 L + GIRA+LD R N + G+K + K +P+++ IG ++ NK+V I R G+K Sbjct: 543 LEELGIRAELDDR-NETIGYKIREANGKYKIPMQLIIGKNEVENKEVNI--RRFGSK--- 596 Query: 453 PSTDLVEQVRVLLDGIQANLLETAKAKRD 367 +Q LLD +++ A K D Sbjct: 597 ------DQFSKLLDEFYTYVVDEATIKFD 619
>SYT_STAES (Q8CS74) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 645 Score = 33.1 bits (74), Expect = 0.72 Identities = 14/48 (29%), Positives = 30/48 (62%) Frame = -1 Query: 630 LNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRI 487 L G+R ++D R N G+K + +MK +P +I +G +++ +++V + Sbjct: 569 LKSQGVRVEIDDR-NEKMGYKIREAQMKKIPYQIVVGDQEVEHQEVNV 615
>SYT_STRP1 (Q9A115) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 647 Score = 33.1 bits (74), Expect = 0.72 Identities = 26/90 (28%), Positives = 45/90 (50%) Frame = -1 Query: 633 TLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKVDI 454 TL G+RAD+D R N +K + +P ++ +G K++ +K V + R G+K Sbjct: 566 TLRDRGVRADVDDR-NEKMQYKIRASQTSKIPYQLIVGDKEMEDKSVNV--RRYGSK--- 619 Query: 453 PSTDLVEQVRVLLDGIQANLLETAKAKRDA 364 T E V ++ I A++ K++ DA Sbjct: 620 --TTHTESVEEFVENILADI--ARKSRPDA 645
>SYH_MESAU (P07178) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 508 Score = 33.1 bits (74), Expect = 0.72 Identities = 20/66 (30%), Positives = 37/66 (56%) Frame = -1 Query: 621 AGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKVDIPSTD 442 AGI+A+L ++N + E G+PL IG ++L + +++ + +VD+ D Sbjct: 433 AGIKAELLYKKNPKLLNQLQYCEETGIPLVAIIGEQELKDGVIKLRSVASREEVDVRRED 492 Query: 441 LVEQVR 424 LVE++R Sbjct: 493 LVEEIR 498
>SYH_PONPY (Q5R4R2) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 509 Score = 32.7 bits (73), Expect = 0.94 Identities = 21/72 (29%), Positives = 39/72 (54%) Frame = -1 Query: 639 VYTLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKV 460 V L AGI+A+L ++N + E G+PL IG ++L + +++ + +V Sbjct: 428 VSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELEDGVIKLRSVTSREEV 487 Query: 459 DIPSTDLVEQVR 424 D+ DLVE+++ Sbjct: 488 DVRREDLVEEIK 499
>SYH_HUMAN (P12081) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 509 Score = 32.7 bits (73), Expect = 0.94 Identities = 21/72 (29%), Positives = 39/72 (54%) Frame = -1 Query: 639 VYTLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKV 460 V L AGI+A+L ++N + E G+PL IG ++L + +++ + +V Sbjct: 428 VSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVTSREEV 487 Query: 459 DIPSTDLVEQVR 424 D+ DLVE+++ Sbjct: 488 DVRREDLVEEIK 499
>SYT_STRP8 (Q8P234) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 647 Score = 32.3 bits (72), Expect = 1.2 Identities = 19/69 (27%), Positives = 34/69 (49%) Frame = -1 Query: 633 TLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKVDI 454 TL G+RAD+D R N +K + +P ++ +G K++ +K V + R + A Sbjct: 566 TLRDRGVRADVDDR-NEKMQYKIRASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTE 624 Query: 453 PSTDLVEQV 427 + VE + Sbjct: 625 SVEEFVENI 633
>SYT_STRP6 (Q5XDC4) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 647 Score = 32.3 bits (72), Expect = 1.2 Identities = 19/69 (27%), Positives = 34/69 (49%) Frame = -1 Query: 633 TLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKVDI 454 TL G+RAD+D R N +K + +P ++ +G K++ +K V + R + A Sbjct: 566 TLRDRGVRADVDDR-NEKMQYKIRTSQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTE 624 Query: 453 PSTDLVEQV 427 + VE + Sbjct: 625 SVEEFVENI 633
>SYP_ZYMMO (P75000) Putative prolyl-tRNA synthetase (EC 6.1.1.15)| (Proline--tRNA ligase) (ProRS) Length = 443 Score = 32.3 bits (72), Expect = 1.2 Identities = 21/59 (35%), Positives = 29/59 (49%) Frame = -1 Query: 630 LNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKVDI 454 L AGI D R N G K++ ++ G+P ++ IGPK V + R NG K I Sbjct: 370 LEAAGIDTLYDDR-NERGGAKFATMDLIGLPWQVVIGPKGAEKGVVELKNRANGEKQTI 427
>SYT_STRP3 (Q8K8C0) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 647 Score = 32.0 bits (71), Expect = 1.6 Identities = 19/69 (27%), Positives = 33/69 (47%) Frame = -1 Query: 633 TLNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKVDI 454 TL G+RAD+D R N +K + +P ++ +G K++ K V + R + A Sbjct: 566 TLRDRGVRADVDDR-NEKMQYKIRASQTSKIPYQLIVGDKEMEEKSVNVRRYGSKATHTE 624 Query: 453 PSTDLVEQV 427 + VE + Sbjct: 625 SVEEFVENI 633
>SYT_RHOPA (Q6N4D3) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 658 Score = 31.6 bits (70), Expect = 2.1 Identities = 17/65 (26%), Positives = 34/65 (52%) Frame = -1 Query: 630 LNQAGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKVDIP 451 L +AG+RAD+D R N +K + + VP + +G K+ + V + R + + +P Sbjct: 576 LRKAGLRADIDLR-NEKINFKVREHSLAKVPALLVVGKKEAESHSVSVRRLGSDGQKVMP 634 Query: 450 STDLV 436 + + + Sbjct: 635 TDEAI 639
>UNC52_CAEEL (Q06561) Basement membrane proteoglycan precursor (Perlecan homolog)| (Uncoordinated protein 52) Length = 3375 Score = 31.6 bits (70), Expect = 2.1 Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 16/124 (12%) Frame = -1 Query: 525 IGPKDLANKQVRIVRRDNGAKVDIPSTDLVEQVRVLLDGIQAN-----LLETAKAKRDAC 361 IG + Q + ++ G D+PS VEQ ++L + + E K + Sbjct: 2468 IGKTETKPNQSVVWTKEEG---DLPSGSRVEQGVLMLPSVHRDDEGSYTCEIVKEENPVF 2524 Query: 360 IVIISTWDEFIAALNDKKLILAPWCDEEEVEKDVK-----ARTKG------ELGAAKTLC 214 + D+FI ++ + + L P DEE V D++ A KG + + L Sbjct: 2525 STVDLQIDDFIPVIDGEPIELPPLSDEEIVNLDIEITLNTANPKGIIFETKRINSGDLLA 2584 Query: 213 TPFD 202 TP+D Sbjct: 2585 TPYD 2588
>TPR_HUMAN (P12270) Nucleoprotein TPR| Length = 2349 Score = 31.2 bits (69), Expect = 2.7 Identities = 16/33 (48%), Positives = 23/33 (69%) Frame = -1 Query: 513 DLANKQVRIVRRDNGAKVDIPSTDLVEQVRVLL 415 D ANKQ ++ RDN +++I DL +Q+RVLL Sbjct: 473 DKANKQSSVLERDN-RRMEIQVKDLSQQIRVLL 504
>SYH_FUGRU (P70076) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 519 Score = 31.2 bits (69), Expect = 2.7 Identities = 18/66 (27%), Positives = 35/66 (53%) Frame = -1 Query: 621 AGIRADLDARENYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRIVRRDNGAKVDIPSTD 442 AGI+A+L +++ + E G+PL +G ++L N V++ +VDI D Sbjct: 449 AGIKAELMYKKSPKLLSQLQHCEESGIPLVAILGEQELKNGVVKLRNVATRDEVDISRAD 508 Query: 441 LVEQVR 424 L+ +++ Sbjct: 509 LIAEIK 514
>DPOM_AGABT (P30322) Probable DNA polymerase (EC 2.7.7.7) (Fragment)| Length = 797 Score = 30.8 bits (68), Expect = 3.6 Identities = 16/46 (34%), Positives = 21/46 (45%) Frame = -1 Query: 375 KRDACIVIISTWDEFIAALNDKKLILAPWCDEEEVEKDVKARTKGE 238 KR C+ TWD+ + N K WCDE E + R+ GE Sbjct: 72 KRVVCLADNKTWDQSLKYWNSSKYPYPRWCDEYLTESEF-VRSIGE 116
>CACB1_HUMAN (Q02641) Voltage-dependent L-type calcium channel beta-1 subunit| (CAB1) (Calcium channel, voltage-dependent, beta 1 subunit) Length = 598 Score = 25.0 bits (53), Expect(2) = 5.9 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +2 Query: 470 PLSRRTMRTCLFARSFGPISILKGTPFIS 556 PL RTM T A S P+S L+G P+++ Sbjct: 422 PLLNRTMATAALAASPAPVSNLQG-PYLA 449 Score = 23.5 bits (49), Expect(2) = 5.9 Identities = 7/19 (36%), Positives = 13/19 (68%) Frame = +3 Query: 555 PIENISNQESSFHEHPNQL 611 P+E + + +S HE+P +L Sbjct: 454 PLERATGEHASMHEYPGEL 472
>LOLA_SHEON (Q8EER2) Outer-membrane lipoprotein carrier protein precursor| Length = 206 Score = 30.0 bits (66), Expect = 6.1 Identities = 17/39 (43%), Positives = 20/39 (51%) Frame = +1 Query: 292 WSQDQLFVIESCYEFIPSANDYNAGISLCFRCFQQVCLN 408 WSQ + + CYE P A D AGIS CF + LN Sbjct: 122 WSQYAVTKKQDCYEIKPKATD--AGISAVNVCFNKGTLN 158
>GNT1_GIBZE (Q4HVS2) Glucose N-acetyltransferase 1 (EC 2.4.1.-)| (N-acetylglucosaminyltransferase) Length = 431 Score = 30.0 bits (66), Expect = 6.1 Identities = 21/75 (28%), Positives = 28/75 (37%), Gaps = 3/75 (4%) Frame = -1 Query: 342 WDEFIAALNDKKLILAPWCDEEEVEKDVKARTKGELGAAKTLCTPFDQPDLPSGT---VC 172 WD +A K + + W + DV+ R +QPD P VC Sbjct: 369 WDSSVALSEAKFVHFSDWPVPKPWINDVETRLA-------------NQPDCPEDNKKRVC 415 Query: 171 FASGKPAQKWSFWGR 127 + GK QKW W R Sbjct: 416 ESVGKTGQKWIHWRR 430 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 97,869,455 Number of Sequences: 219361 Number of extensions: 2113224 Number of successful extensions: 6794 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 6524 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6781 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5995743495 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
