| Clone Name | rbags30j04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M24425.1|BLYACPI Barley acyl carrier protein I (ACP I) mRNA, complete cds Length = 768 Score = 1158 bits (584), Expect = 0.0 Identities = 587/588 (99%) Strand = Plus / Minus Query: 39 gaacttaggacatggtcctagcttgtttatgaagcctttgggtaattaacccgcagcaac 98 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 768 gaacttaggacatggtcctagcttgtttatgaagcctttgggtaattaacccgcagcaac 709 Query: 99 aacacaaaatctcgagaggatgaagaaagaacaaatggcaatgaacacacaacatagact 158 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 708 aacacaaaatctcgagaggatgaagaaagaacaaatggcaatgaacacacaacatagact 649 Query: 159 gaatgcaaagctgtccataaattattttctctcgccccaaatgcgaccgaaaaatcagaa 218 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 648 gaatgcaaagctgtccataaattattttctctcgccccaaatgcgaccgaaaaatcagaa 589 Query: 219 gtccacagatccagatgacacctttgccttctaaagctgtccaatgaacctaggcgctta 278 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 588 gtccacagatccagatgacacctttgccttctaaagctgtccaatgaacctaggcgctta 529 Query: 279 tgcggtcttctctgtcacaagcttctcgataaggttcgctgcatcctgcacggttgcaat 338 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 528 tgcggtcttctctgtcacaagcttctcgataaggttcgctgcatcctgcacggttgcaat 469 Query: 339 gtcctgcgcgcttgtttcatcaacagtgatgttgaactcttcctcgaggcccatcacaat 398 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 468 gtcctgcgcgcttgtttcatcaacagtgatgttgaactcttcctcgaggcccatcacaat 409 Query: 399 ctcaaccgtgtctagtgagtcggcaccaagttcggagaatttcgactccgctgtgacagg 458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 408 ctcaaccgtgtctagtgagtcggcaccaagttcggagaatttcgactccgctgtgacagg 349 Query: 459 tgtaccatcagggactgccagctgcttcttgactatcatacaaaccttgtcgactgtctc 518 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 348 tgtaccatcagggactgccagctgcttcttgactatcatacaaaccttgtcgactgtctc 289 Query: 519 tttcttggcctgtgcctctcccatggccacacaacaaatcttaaaccgaagcgaactcgg 578 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 288 tttcttggcctgtgcctctcccatggccgcacaacaaatcttaaaccgaagcgaactcgg 229 Query: 579 tcttgaactgatggatacaaagctcatctgccggctatggaaagaaac 626 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 228 tcttgaactgatggatacaaagctcatctgccggctatggaaagaaac 181
>gb|M58753.1|BLYACL1 Hordeum vulgare acyl carrier protein I (Acl1) gene, complete cds Length = 3822 Score = 789 bits (398), Expect = 0.0 Identities = 405/406 (99%), Gaps = 1/406 (0%) Strand = Plus / Minus Query: 1 tagcttttctataacaatag-tacaccacatatgaattcgaacttaggacatggtcctag 59 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 3210 tagcttttctataacaataggtacaccacatatgaattcgaacttaggacatggtcctag 3151 Query: 60 cttgtttatgaagcctttgggtaattaacccgcagcaacaacacaaaatctcgagaggat 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3150 cttgtttatgaagcctttgggtaattaacccgcagcaacaacacaaaatctcgagaggat 3091 Query: 120 gaagaaagaacaaatggcaatgaacacacaacatagactgaatgcaaagctgtccataaa 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3090 gaagaaagaacaaatggcaatgaacacacaacatagactgaatgcaaagctgtccataaa 3031 Query: 180 ttattttctctcgccccaaatgcgaccgaaaaatcagaagtccacagatccagatgacac 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3030 ttattttctctcgccccaaatgcgaccgaaaaatcagaagtccacagatccagatgacac 2971 Query: 240 ctttgccttctaaagctgtccaatgaacctaggcgcttatgcggtcttctctgtcacaag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2970 ctttgccttctaaagctgtccaatgaacctaggcgcttatgcggtcttctctgtcacaag 2911 Query: 300 cttctcgataaggttcgctgcatcctgcacggttgcaatgtcctgcgcgcttgtttcatc 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2910 cttctcgataaggttcgctgcatcctgcacggttgcaatgtcctgcgcgcttgtttcatc 2851 Query: 360 aacagtgatgttgaactcttcctcgaggcccatcacaatctcaacc 405 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2850 aacagtgatgttgaactcttcctcgaggcccatcacaatctcaacc 2805 Score = 285 bits (144), Expect = 9e-74 Identities = 144/144 (100%) Strand = Plus / Minus Query: 403 accgtgtctagtgagtcggcaccaagttcggagaatttcgactccgctgtgacaggtgta 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2721 accgtgtctagtgagtcggcaccaagttcggagaatttcgactccgctgtgacaggtgta 2662 Query: 463 ccatcagggactgccagctgcttcttgactatcatacaaaccttgtcgactgtctctttc 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2661 ccatcagggactgccagctgcttcttgactatcatacaaaccttgtcgactgtctctttc 2602 Query: 523 ttggcctgtgcctctcccatggcc 546 |||||||||||||||||||||||| Sbjct: 2601 ttggcctgtgcctctcccatggcc 2578 Score = 157 bits (79), Expect = 5e-35 Identities = 79/79 (100%) Strand = Plus / Minus Query: 548 cacaacaaatcttaaaccgaagcgaactcggtcttgaactgatggatacaaagctcatct 607 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2008 cacaacaaatcttaaaccgaagcgaactcggtcttgaactgatggatacaaagctcatct 1949 Query: 608 gccggctatggaaagaaac 626 ||||||||||||||||||| Sbjct: 1948 gccggctatggaaagaaac 1930
>dbj|AK120370.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013070J18, full insert sequence Length = 826 Score = 188 bits (95), Expect = 1e-44 Identities = 194/227 (85%) Strand = Plus / Minus Query: 298 agcttctcgataaggttcgctgcatcctgcacggttgcaatgtcctgcgcgcttgtttca 357 ||||||||||| ||||| |||||||| || || ||||| ||||||||||| |||||||| Sbjct: 499 agcttctcgatcaggtttgctgcatcttgaacagttgcgatgtcctgcgcacttgtttcg 440 Query: 358 tcaacagtgatgttgaactcttcctcgaggcccatcacaatctcaaccgtgtctagtgag 417 || |||||||||||||| || ||||||||||||||||||||||||||||| || ||||| Sbjct: 439 tcgacagtgatgttgaattcctcctcgaggcccatcacaatctcaaccgtatccagtgaa 380 Query: 418 tcggcaccaagttcggagaatttcgactccgctgtgacaggtgtaccatcagggactgcc 477 || ||||| ||||| |||||||| || || | ||||||| || || ||||||| |||| Sbjct: 379 tcagcaccgagttcagagaattttgattcaccagtgacagcagttccctcagggagtgcc 320 Query: 478 agctgcttcttgactatcatacaaaccttgtcgactgtctctttctt 524 ||||| |||| ||||| | |||||||||||||||||||||||||| Sbjct: 319 agctgtgtcttaactatgttgcaaaccttgtcgactgtctctttctt 273
>dbj|AK060472.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-E08, full insert sequence Length = 820 Score = 188 bits (95), Expect = 1e-44 Identities = 194/227 (85%) Strand = Plus / Minus Query: 298 agcttctcgataaggttcgctgcatcctgcacggttgcaatgtcctgcgcgcttgtttca 357 ||||||||||| ||||| |||||||| || || ||||| ||||||||||| |||||||| Sbjct: 486 agcttctcgatcaggtttgctgcatcttgaacagttgcgatgtcctgcgcacttgtttcg 427 Query: 358 tcaacagtgatgttgaactcttcctcgaggcccatcacaatctcaaccgtgtctagtgag 417 || |||||||||||||| || ||||||||||||||||||||||||||||| || ||||| Sbjct: 426 tcgacagtgatgttgaattcctcctcgaggcccatcacaatctcaaccgtatccagtgaa 367 Query: 418 tcggcaccaagttcggagaatttcgactccgctgtgacaggtgtaccatcagggactgcc 477 || ||||| ||||| |||||||| || || | ||||||| || || ||||||| |||| Sbjct: 366 tcagcaccgagttcagagaattttgattcaccagtgacagcagttccctcagggagtgcc 307 Query: 478 agctgcttcttgactatcatacaaaccttgtcgactgtctctttctt 524 ||||| |||| ||||| | |||||||||||||||||||||||||| Sbjct: 306 agctgtgtcttaactatgttgcaaaccttgtcgactgtctctttctt 260
>gb|AY110717.1| Zea mays CL8824_1 mRNA sequence Length = 900 Score = 141 bits (71), Expect = 3e-30 Identities = 188/227 (82%) Strand = Plus / Plus Query: 298 agcttctcgataaggttcgctgcatcctgcacggttgcaatgtcctgcgcgcttgtttca 357 ||||||||||| |||| || || |||||||| || || |||||||| ||||||||||| Sbjct: 393 agcttctcgatgaggtctgcagcgtcctgcaccgtcgcgatgtcctgtgcgcttgtttcg 452 Query: 358 tcaacagtgatgttgaactcttcctcgaggcccatcacaatctcaaccgtgtctagtgag 417 || || || ||||||||| | ||||||||||||||||||||||||||||| || ||||| Sbjct: 453 tcgacggttatgttgaacgcctcctcgaggcccatcacaatctcaaccgtatccagtgaa 512 Query: 418 tcggcaccaagttcggagaatttcgactccgctgtgacaggtgtaccatcagggactgcc 477 || ||||||||||||| |||||| || || | |||| || || ||||| || | ||| Sbjct: 513 tcagcaccaagttcggcgaattttgattcaccagtgatagcagtcccatcgggaagagcc 572 Query: 478 agctgcttcttgactatcatacaaaccttgtcgactgtctctttctt 524 ||||||| ||| ||||| |||| ||||||||||||||||| ||||| Sbjct: 573 agctgctccttcactatactacagaccttgtcgactgtctccttctt 619
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 127 bits (64), Expect = 5e-26 Identities = 97/108 (89%) Strand = Plus / Plus Query: 298 agcttctcgataaggttcgctgcatcctgcacggttgcaatgtcctgcgcgcttgtttca 357 ||||||||||| ||||| |||||||| || || ||||| ||||||||||| |||||||| Sbjct: 21276613 agcttctcgatcaggtttgctgcatcttgaacagttgcgatgtcctgcgcacttgtttcg 21276672 Query: 358 tcaacagtgatgttgaactcttcctcgaggcccatcacaatctcaacc 405 || |||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 21276673 tcgacagtgatgttgaattcctcctcgaggcccatcacaatctcaacc 21276720 Score = 71.9 bits (36), Expect = 2e-09 Identities = 105/128 (82%) Strand = Plus / Plus Query: 403 accgtgtctagtgagtcggcaccaagttcggagaatttcgactccgctgtgacaggtgta 462 ||||| || ||||| || ||||| ||||| |||||||| || || | ||||||| || Sbjct: 21276796 accgtatccagtgaatcagcaccgagttcagagaattttgattcaccagtgacagcagtt 21276855 Query: 463 ccatcagggactgccagctgcttcttgactatcatacaaaccttgtcgactgtctctttc 522 || ||||||| ||||||||| |||| ||||| | |||||||||||||||||||||||| Sbjct: 21276856 ccctcagggagtgccagctgtgtcttaactatgttgcaaaccttgtcgactgtctctttc 21276915 Query: 523 ttggcctg 530 || ||||| Sbjct: 21276916 ttagcctg 21276923
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 127 bits (64), Expect = 5e-26 Identities = 97/108 (89%) Strand = Plus / Plus Query: 298 agcttctcgataaggttcgctgcatcctgcacggttgcaatgtcctgcgcgcttgtttca 357 ||||||||||| ||||| |||||||| || || ||||| ||||||||||| |||||||| Sbjct: 21202832 agcttctcgatcaggtttgctgcatcttgaacagttgcgatgtcctgcgcacttgtttcg 21202891 Query: 358 tcaacagtgatgttgaactcttcctcgaggcccatcacaatctcaacc 405 || |||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 21202892 tcgacagtgatgttgaattcctcctcgaggcccatcacaatctcaacc 21202939 Score = 71.9 bits (36), Expect = 2e-09 Identities = 105/128 (82%) Strand = Plus / Plus Query: 403 accgtgtctagtgagtcggcaccaagttcggagaatttcgactccgctgtgacaggtgta 462 ||||| || ||||| || ||||| ||||| |||||||| || || | ||||||| || Sbjct: 21203015 accgtatccagtgaatcagcaccgagttcagagaattttgattcaccagtgacagcagtt 21203074 Query: 463 ccatcagggactgccagctgcttcttgactatcatacaaaccttgtcgactgtctctttc 522 || ||||||| ||||||||| |||| ||||| | |||||||||||||||||||||||| Sbjct: 21203075 ccctcagggagtgccagctgtgtcttaactatgttgcaaaccttgtcgactgtctctttc 21203134 Query: 523 ttggcctg 530 || ||||| Sbjct: 21203135 ttagcctg 21203142
>emb|AL713932.4|CNS07YPD Oryza sativa chromosome 12, . BAC OSJNBb0094E08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137571 Score = 127 bits (64), Expect = 5e-26 Identities = 97/108 (89%) Strand = Plus / Minus Query: 298 agcttctcgataaggttcgctgcatcctgcacggttgcaatgtcctgcgcgcttgtttca 357 ||||||||||| ||||| |||||||| || || ||||| ||||||||||| |||||||| Sbjct: 13587 agcttctcgatcaggtttgctgcatcttgaacagttgcgatgtcctgcgcacttgtttcg 13528 Query: 358 tcaacagtgatgttgaactcttcctcgaggcccatcacaatctcaacc 405 || |||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 13527 tcgacagtgatgttgaattcctcctcgaggcccatcacaatctcaacc 13480 Score = 71.9 bits (36), Expect = 2e-09 Identities = 105/128 (82%) Strand = Plus / Minus Query: 403 accgtgtctagtgagtcggcaccaagttcggagaatttcgactccgctgtgacaggtgta 462 ||||| || ||||| || ||||| ||||| |||||||| || || | ||||||| || Sbjct: 13404 accgtatccagtgaatcagcaccgagttcagagaattttgattcaccagtgacagcagtt 13345 Query: 463 ccatcagggactgccagctgcttcttgactatcatacaaaccttgtcgactgtctctttc 522 || ||||||| ||||||||| |||| ||||| | |||||||||||||||||||||||| Sbjct: 13344 ccctcagggagtgccagctgtgtcttaactatgttgcaaaccttgtcgactgtctctttc 13285 Query: 523 ttggcctg 530 || ||||| Sbjct: 13284 ttagcctg 13277
>emb|AL713937.3|CNS07YPI Oryza sativa chromosome 12, . BAC OJ1103_B10 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 95132 Score = 127 bits (64), Expect = 5e-26 Identities = 97/108 (89%) Strand = Plus / Minus Query: 298 agcttctcgataaggttcgctgcatcctgcacggttgcaatgtcctgcgcgcttgtttca 357 ||||||||||| ||||| |||||||| || || ||||| ||||||||||| |||||||| Sbjct: 84665 agcttctcgatcaggtttgctgcatcttgaacagttgcgatgtcctgcgcacttgtttcg 84606 Query: 358 tcaacagtgatgttgaactcttcctcgaggcccatcacaatctcaacc 405 || |||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 84605 tcgacagtgatgttgaattcctcctcgaggcccatcacaatctcaacc 84558 Score = 71.9 bits (36), Expect = 2e-09 Identities = 105/128 (82%) Strand = Plus / Minus Query: 403 accgtgtctagtgagtcggcaccaagttcggagaatttcgactccgctgtgacaggtgta 462 ||||| || ||||| || ||||| ||||| |||||||| || || | ||||||| || Sbjct: 84482 accgtatccagtgaatcagcaccgagttcagagaattttgattcaccagtgacagcagtt 84423 Query: 463 ccatcagggactgccagctgcttcttgactatcatacaaaccttgtcgactgtctctttc 522 || ||||||| ||||||||| |||| ||||| | |||||||||||||||||||||||| Sbjct: 84422 ccctcagggagtgccagctgtgtcttaactatgttgcaaaccttgtcgactgtctctttc 84363 Query: 523 ttggcctg 530 || ||||| Sbjct: 84362 ttagcctg 84355
>emb|X95895.1|ZMACP Z.mays mRNA for acyl carrier protein Length = 400 Score = 83.8 bits (42), Expect = 6e-13 Identities = 60/66 (90%) Strand = Plus / Minus Query: 378 ttcctcgaggcccatcacaatctcaaccgtgtctagtgagtcggcaccaagttcggagaa 437 |||||| |||||||||||||||||||||||||| || || || ||||||||||| ||||| Sbjct: 108 ttcctcaaggcccatcacaatctcaaccgtgtccagcgaatccgcaccaagttcagagaa 49 Query: 438 tttcga 443 |||||| Sbjct: 48 tttcga 43
>ref|XM_483668.1| Oryza sativa (japonica cultivar-group), mRNA Length = 724 Score = 81.8 bits (41), Expect = 3e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 365 tgatgttgaactcttcctcgaggcccatcacaatctcaaccgtgtctagtgagtcggcac 424 |||||| |||||| |||||||| ||||||||||||||||||||||| ||||| || |||| Sbjct: 360 tgatgtggaactcctcctcgagacccatcacaatctcaaccgtgtccagtgaatcagcac 301 Query: 425 caagttcggagaa 437 |||| || ||||| Sbjct: 300 caagatctgagaa 288
>gb|BT019098.1| Zea mays clone Contig697.F mRNA sequence Length = 702 Score = 81.8 bits (41), Expect = 3e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 379 tcctcgaggcccatcacaatctcaaccgtgtctagtgagtcggcaccaagttcggagaat 438 ||||| |||||||||||||||||||||||||| || || || ||||||||||| |||||| Sbjct: 304 tcctcaaggcccatcacaatctcaaccgtgtccagcgaatccgcaccaagttcagagaat 363 Query: 439 ttcga 443 ||||| Sbjct: 364 ttcga 368
>dbj|AK120938.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037A21, full insert sequence Length = 724 Score = 81.8 bits (41), Expect = 3e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 365 tgatgttgaactcttcctcgaggcccatcacaatctcaaccgtgtctagtgagtcggcac 424 |||||| |||||| |||||||| ||||||||||||||||||||||| ||||| || |||| Sbjct: 360 tgatgtggaactcctcctcgagacccatcacaatctcaaccgtgtccagtgaatcagcac 301 Query: 425 caagttcggagaa 437 |||| || ||||| Sbjct: 300 caagatctgagaa 288
>gb|AY104707.1| Zea mays PCO060889 mRNA sequence Length = 777 Score = 81.8 bits (41), Expect = 3e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 379 tcctcgaggcccatcacaatctcaaccgtgtctagtgagtcggcaccaagttcggagaat 438 ||||| |||||||||||||||||||||||||| || || || ||||||||||| |||||| Sbjct: 399 tcctcaaggcccatcacaatctcaaccgtgtccagcgaatccgcaccaagttcagagaat 340 Query: 439 ttcga 443 ||||| Sbjct: 339 ttcga 335
>gb|BT016215.1| Zea mays clone Contig48 mRNA sequence Length = 766 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 379 tcctcgaggcccatcacaatctcaaccgtgtctagtgagtcggcaccaagttcggagaat 438 |||||||| | ||||||||||||||||||||| ||||| || ||||| ||||| |||||| Sbjct: 418 tcctcgagactcatcacaatctcaaccgtgtccagtgaatctgcaccgagttcagagaat 359 Query: 439 ttcga 443 ||||| Sbjct: 358 ttcga 354
>emb|X57956.1|ZMACPAA Z.mays acp mRNA for acyl carrier protein Length = 492 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 379 tcctcgaggcccatcacaatctcaaccgtgtctagtgagtcggcaccaagttcggagaat 438 |||||||| | ||||||||||||||||||||| ||||| || ||||| ||||| |||||| Sbjct: 281 tcctcgagactcatcacaatctcaaccgtgtccagtgaatctgcaccgagttcagagaat 222 Query: 439 ttcga 443 ||||| Sbjct: 221 ttcga 217
>gb|AY104517.1| Zea mays PCO060888 mRNA sequence Length = 805 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 379 tcctcgaggcccatcacaatctcaaccgtgtctagtgagtcggcaccaagttcggagaat 438 |||||||| | ||||||||||||||||||||| ||||| || ||||| ||||| |||||| Sbjct: 416 tcctcgagactcatcacaatctcaaccgtgtccagtgaatctgcaccgagttcagagaat 357 Query: 439 ttcga 443 ||||| Sbjct: 356 ttcga 352
>gb|M24426.1|BLYACPIII Barley acyl carrier protein III (ACP III) mRNA, complete cds Length = 520 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 372 gaactcttcctcgaggcccatcacaatctcaaccgtgtctagtgagtcggcaccaagttc 431 |||||| ||||| |||||||||||||||||||||||||| ||||| || || ||||| || Sbjct: 238 gaactcctcctcaaggcccatcacaatctcaaccgtgtccagtgaatcagctccaaggtc 179 Query: 432 ggagaa 437 ||||| Sbjct: 178 agagaa 173
>gb|AF428256.1|AF428256 Olea europaea acyl carrier protein (ACP) mRNA, complete cds Length = 763 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 373 aactcttcctcgaggcccatcacaatctcaaccgtgtctagtgagtcggcaccaagt 429 |||||||||||||| ||||| ||||||||||||||||| || || || ||||||||| Sbjct: 443 aactcttcctcgagtcccatgacaatctcaaccgtgtcaagggaatcagcaccaagt 387
>ref|XM_470475.1| Oryza sativa (japonica cultivar-group), mRNA Length = 651 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 379 tcctcgaggcccatcacaatctcaaccgtgtctagtgagtcggcaccaag 428 ||||| |||||||||||||| ||||||||||| ||||| || |||||||| Sbjct: 377 tcctcaaggcccatcacaatttcaaccgtgtcaagtgaatcagcaccaag 328
>dbj|AK108342.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-B02, full insert sequence Length = 651 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 379 tcctcgaggcccatcacaatctcaaccgtgtctagtgagtcggcaccaag 428 ||||| |||||||||||||| ||||||||||| ||||| || |||||||| Sbjct: 377 tcctcaaggcccatcacaatttcaaccgtgtcaagtgaatcagcaccaag 328
>gb|AY459336.1| Oryza sativa (japonica cultivar-group) clone CL034244.2 R2R3-MYB gene region Length = 65993 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 365 tgatgttgaactcttcctcgaggcccatcacaatctcaacc 405 |||||| |||||| |||||||| |||||||||||||||||| Sbjct: 64015 tgatgtggaactcctcctcgagacccatcacaatctcaacc 64055
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 365 tgatgttgaactcttcctcgaggcccatcacaatctcaacc 405 |||||| |||||| |||||||| |||||||||||||||||| Sbjct: 27558976 tgatgtggaactcctcctcgagacccatcacaatctcaacc 27559016
>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1479_B11 Length = 105702 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 365 tgatgttgaactcttcctcgaggcccatcacaatctcaacc 405 |||||| |||||| |||||||| |||||||||||||||||| Sbjct: 41266 tgatgtggaactcctcctcgagacccatcacaatctcaacc 41306
>emb|AJ584698.1| Cicer arietinum partial mRNA for acyl carrier protein 1 (acp1 gene), clone CanACP1 Length = 528 Score = 54.0 bits (27), Expect = 6e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 379 tcctcgaggcccatcacaatctcaaccgtgtctagtgagtcggcaccaagttcggagaat 438 ||||| || ||||||||||||||||||||||| || || || || |||||| | || ||| Sbjct: 182 tcctcaagtcccatcacaatctcaaccgtgtcaagagaatcagctccaagtgcagaaaat 123 Query: 439 ttcgactccgctgtgacag 457 || |||||| | ||||||| Sbjct: 122 ttggactccccggtgacag 104
>gb|M17636.1|SPIACPI Spinach acyl carrier protein I (ACP-I) mRNA, complete cds Length = 664 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 372 gaactcttcctcgaggcccatcacaatctcaaccgtgtc 410 |||||||||||||||| |||||| |||||||||||||| Sbjct: 384 gaactcttcctcgaggttcatcactatctcaaccgtgtc 346
>ref|NM_104336.3| Arabidopsis thaliana ACP2 (ACYL CARRIER PROTEIN 2) AT1G54580 (ACP2) mRNA, complete cds Length = 795 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 372 gaactcttcctcgaggcccatcacaatctcaaccgtgtctagtgagtcggcaccaagt 429 |||||||||||| || |||||||||||||| ||||| || || || || ||||||||| Sbjct: 454 gaactcttcctctagtcccatcacaatctccaccgtatcaagggaatcagcaccaagt 397
>emb|X13127.1|BNACP22C Brassica napus 22C01 mRNA for seed acyl-carrier protein (ACP) Length = 291 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 373 aactcttcctcgaggcccatcacaatctcaaccgtgtc 410 ||||||||||| | ||||||||||||||||||||||| Sbjct: 197 aactcttcctccaaacccatcacaatctcaaccgtgtc 160
>emb|X13124.1|BNACP04F Brassica napus 04F05/05E01 mRNA for seed acyl-carrier protein (ACP) Length = 319 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 373 aactcttcctcgaggcccatcacaatctcaaccgtgtc 410 ||||||||||| | ||||||||||||||||||||||| Sbjct: 311 aactcttcctctaaacccatcacaatctcaaccgtgtc 274
>emb|X13123.1|BNACP34F Brassica napus 34F12 mRNA for seed acyl-carrier protein (ACP) Length = 368 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 373 aactcttcctcgaggcccatcacaatctcaaccgtgtc 410 ||||||||||| | ||||||||||||||||||||||| Sbjct: 274 aactcttcctctaaacccatcacaatctcaaccgtgtc 237
>gb|AY081661.1| Arabidopsis thaliana acyl carrier protein isoform 2 (At1g54580) mRNA, complete cds Length = 459 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 372 gaactcttcctcgaggcccatcacaatctcaaccgtgtctagtgagtcggcaccaagt 429 |||||||||||| || |||||||||||||| ||||| || || || || ||||||||| Sbjct: 315 gaactcttcctctagtcccatcacaatctccaccgtatcaagggaatcagcaccaagt 258
>gb|AY062773.1| Arabidopsis thaliana tissue-specific acyl carrier protein isoform 2 from A (At1g54580; T22H22.3) mRNA, complete cds Length = 617 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 372 gaactcttcctcgaggcccatcacaatctcaaccgtgtctagtgagtcggcaccaagt 429 |||||||||||| || |||||||||||||| ||||| || || || || ||||||||| Sbjct: 401 gaactcttcctctagtcccatcacaatctccaccgtatcaagggaatcagcaccaagt 344
>emb|BX814818.1|CNS0AEA5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB9ZB11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 692 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 372 gaactcttcctcgaggcccatcacaatctcaaccgtgtctagtgagtcggcaccaagt 429 |||||||||||| || |||||||||||||| ||||| || || || || ||||||||| Sbjct: 351 gaactcttcctctagtcccatcacaatctccaccgtatcaagggaatcagcaccaagt 294
>gb|AY088071.1| Arabidopsis thaliana clone 40893 mRNA, complete sequence Length = 731 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 372 gaactcttcctcgaggcccatcacaatctcaaccgtgtctagtgagtcggcaccaagt 429 |||||||||||| || |||||||||||||| ||||| || || || || ||||||||| Sbjct: 456 gaactcttcctctagtcccatcacaatctccaccgtatcaagggaatcagcaccaagt 399
>gb|AF041386.1|AF041386 Fragaria x ananassa clone FANR3 acyl carrier protein mRNA, complete cds Length = 674 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 298 agcttctcgataaggttcgctgcatcctgcacggttgcaatg 339 |||||||||||||| | ||| |||||||| |||||||||||| Sbjct: 430 agcttctcgataagatccgcagcatcctgaacggttgcaatg 389
>gb|L14814.1|ATHCARPRO Arabidopsis thaliana tissue-specific acyl carrier protein isoform 2 cDNA Length = 716 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 372 gaactcttcctcgaggcccatcacaatctcaaccgtgtctagtgagtcggcaccaagt 429 |||||||||||| || |||||||||||||| ||||| || || || || ||||||||| Sbjct: 375 gaactcttcctctagtcccatcacaatctccaccgtatcaagggaatcagcaccaagt 318
>gb|M58754.1|BLYACL3 Hordeum vulgare acyl carrier protein III (Acl3) gene, complete cds Length = 4830 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 372 gaactcttcctcgaggcccatcacaatctcaacc 405 |||||| ||||| ||||||||||||||||||||| Sbjct: 3883 gaactcctcctcaaggcccatcacaatctcaacc 3850
>gb|M63799.1|BLYACL2 Barley acyl carrier protein II (Ac12) mRNA, complete cds Length = 706 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 379 tcctcgaggcccatcacaatctcaaccgtgtctagtgagtcggcaccaag 428 |||||||||||||| |||||||||||||| || | || ||||||||||| Sbjct: 393 tcctcgaggcccataacaatctcaaccgtatccaaagaatcggcaccaag 344
>gb|BT012821.1| Lycopersicon esculentum clone 113870R, mRNA sequence Length = 827 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 377 cttcctcgaggcccatcacaatctcaaccgtgtctagtgagtcggcaccaagt 429 ||||||| || ||||| ||||||||||||||||| || || || ||||||||| Sbjct: 451 cttcctcaagtcccatgacaatctcaaccgtgtcaagagaatcagcaccaagt 399
>gb|AF127796.1|AF127796 Capsicum chinense acyl carrier protein (Acl1) mRNA, complete cds Length = 683 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 377 cttcctcgaggcccatcacaatctcaaccgtgtctagtgagtcggcaccaagt 429 ||||||| || ||||| ||||||||||||||||| || || || ||||||||| Sbjct: 336 cttcctcaagtcccatgacaatctcaaccgtgtcaagagaatcagcaccaagt 284
>emb|Y10994.1|CGACP C.glauca mRNA for acyl carrier protein Length = 738 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Minus Query: 379 tcctcgaggcccatcacaatctcaaccgtgtc 410 ||||| || ||||||||||||||||||||||| Sbjct: 425 tcctcaagtcccatcacaatctcaaccgtgtc 394
>emb|X13126.1|BNACP10C Brassica napus 10C04 mRNA for seed acyl-carrier protein (ACP) Length = 337 Score = 48.1 bits (24), Expect = 0.035 Identities = 48/56 (85%) Strand = Plus / Minus Query: 373 aactcttcctcgaggcccatcacaatctcaaccgtgtctagtgagtcggcaccaag 428 ||||||||||| | |||||||| |||||||||||||| || ||||| || ||||| Sbjct: 240 aactcttcctctaaacccatcactatctcaaccgtgtcgagagagtctgctccaag 185
>dbj|AK058903.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-B10, full insert sequence Length = 414 Score = 48.1 bits (24), Expect = 0.035 Identities = 75/92 (81%) Strand = Plus / Minus Query: 342 ctgcgcgcttgtttcatcaacagtgatgttgaactcttcctcgaggcccatcacaatctc 401 ||||||||||| |||||| ||| |||| ||||| | || || || ||||| |||||||| Sbjct: 158 ctgcgcgcttgattcatcgacactgatcttgaaagcctcttcaagacccataacaatctc 99 Query: 402 aaccgtgtctagtgagtcggcaccaagttcgg 433 |||||| || || || || |||||||| |||| Sbjct: 98 aaccgtatccagggaatcagcaccaagatcgg 67
>ref|NM_122602.1| Arabidopsis thaliana ACP5; acyl carrier AT5G27200 (ACP5) mRNA, complete cds Length = 420 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Minus Query: 372 gaactcttcctcgaggcccatcacaatctcaaccgtgtc 410 |||||||||||| | |||||||| |||||||||||||| Sbjct: 324 gaactcttcctccaaacccatcactatctcaaccgtgtc 286
>gb|AC157320.2| Zea mays clone ZMMBBb-7C14, complete sequence Length = 132140 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 366 gatgttgaactcttcctcgaggc 388 ||||||||||||||||||||||| Sbjct: 24204 gatgttgaactcttcctcgaggc 24226
>gb|AF083950.1|AF083950 Coriandrum sativum acyl carrier protein (ACP-1) mRNA, complete cds Length = 566 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 373 aactcttcctcgaggcccatcacaatctcaaccgt 407 ||||| ||||| || |||||||||||||||||||| Sbjct: 396 aactcctcctctagtcccatcacaatctcaaccgt 362
>emb|X77622.1|CLACP13 C.lanceolata ACP1-3 mRNA for acyl carrier protein Length = 688 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Minus Query: 373 aactcttcctcgaggcccatcacaatctcaaccgtgtc 410 ||||||||||| || ||||| |||||||| |||||||| Sbjct: 368 aactcttcctctagtcccatgacaatctccaccgtgtc 331
>emb|X57698.1|ATACPA1 Arabidopsis thaliana A1 gene for acyl carrier protein, exons 1 to 4 Length = 1927 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 372 gaactcttcctcgaggcccatcacaatctc 401 |||||||||||| || |||||||||||||| Sbjct: 1664 gaactcttcctctagtcccatcacaatctc 1635
>emb|X13125.1|BNACP34C Brassica napus 34C02 mRNA for seed acyl-carrier protein (ACP) Length = 405 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Minus Query: 373 aactcttcctcgaggcccatcacaatctcaaccgtgtc 410 ||||||||||| | |||||||| |||||||||||||| Sbjct: 311 aactcttcctctaaacccatcactatctcaaccgtgtc 274
>emb|X13122.1|BNACP10H Brassica napus 10H11/11D11 mRNA for seed acyl-carrier protein (ACP) Length = 405 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Minus Query: 373 aactcttcctcgaggcccatcacaatctcaaccgtgtc 410 ||||||||||| | |||||||| |||||||||||||| Sbjct: 311 aactcttcctctaaacccatcactatctcaaccgtgtc 274
>emb|X07970.1|BNACP28F Brassica napus 28F10 mRNA for seed acyl-carrier protein (ACP) Length = 671 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Minus Query: 373 aactcttcctcgaggcccatcacaatctcaaccgtgtc 410 ||||||||||| | |||||||| |||||||||||||| Sbjct: 371 aactcttcctctaaacccatcactatctcaaccgtgtc 334
>emb|AJ001446.1|FVAJ1446 Fragaria vesca mRNA for putative acyl carrier protein Length = 700 Score = 44.1 bits (22), Expect = 0.55 Identities = 37/42 (88%) Strand = Plus / Minus Query: 298 agcttctcgataaggttcgctgcatcctgcacggttgcaatg 339 |||||||||||||| | ||| |||||||| || ||||||||| Sbjct: 453 agcttctcgataagatccgcagcatcctgaacagttgcaatg 412 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 cccatcacaatctcaaccgt 407 |||||||||||||||||||| Sbjct: 363 cccatcacaatctcaaccgt 344
>gb|AC005388.1|T22H22 Sequence of BAC T22H22 from Arabidopsis thaliana chromosome 1, complete sequence Length = 87768 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 372 gaactcttcctcgaggcccatcacaatctc 401 |||||||||||| || |||||||||||||| Sbjct: 19186 gaactcttcctctagtcccatcacaatctc 19157
>emb|BX814165.1|CNS0AC63 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB5ZA12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1330 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 372 gaactcttcctcgaggcccatcacaatctc 401 |||||||||||| || |||||||||||||| Sbjct: 1132 gaactcttcctctagtcccatcacaatctc 1103
>ref|NM_111374.1| Arabidopsis thaliana ACP1 AT3G05020 (ACP1) mRNA, complete cds Length = 701 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 366 gatgttgaactcttcctcgaggcccatcacaatctcaaccgtgtc 410 |||||| ||||||||||| | ||||| || |||||||||||||| Sbjct: 403 gatgttaaactcttcctctaaacccattactatctcaaccgtgtc 359
>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete genome Length = 3397754 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 478 agctgcttcttgactatcata 498 ||||||||||||||||||||| Sbjct: 2097132 agctgcttcttgactatcata 2097152
>gb|AY770500.1| Coriandrum sativum acyl carrier protein gene, complete cds Length = 1753 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 373 aactcttcctcgaggcccatcacaatctcaacc 405 ||||| ||||| || |||||||||||||||||| Sbjct: 1649 aactcctcctctagtcccatcacaatctcaacc 1617
>gb|AY122251.1| Drosophila melanogaster SD05937 full insert cDNA Length = 6465 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 cgcagcaacaacacaaaatct 110 ||||||||||||||||||||| Sbjct: 3758 cgcagcaacaacacaaaatct 3778
>emb|X16115.1|BNACP09 Brassica napus ACP09 DNA for acyl carrier protein Length = 1083 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 373 aactcttcctcgaggcccatcacaatctcaacc 405 ||||||||||| | |||||||||||||||||| Sbjct: 845 aactcttcctccaaacccatcacaatctcaacc 813
>emb|CR628337.1| Legionella pneumophila str. Lens complete genome Length = 3345687 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 478 agctgcttcttgactatcata 498 ||||||||||||||||||||| Sbjct: 2055555 agctgcttcttgactatcata 2055575
>emb|CR628336.1| Legionella pneumophila str. Paris complete genome Length = 3503610 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 478 agctgcttcttgactatcata 498 ||||||||||||||||||||| Sbjct: 2082340 agctgcttcttgactatcata 2082360
>emb|BX294133.1| Pirellula sp. strain 1 complete genome; segment 1/24 Length = 311050 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Minus Query: 365 tgatgttgaactcttcctcgaggcccatcacaatctcaaccgtgtctagtgagtcggcac 424 |||||| ||||||||| ||||| ||||||| | ||||| ||||| || |||||||||| Sbjct: 159087 tgatgtcgaactcttcttcgagctccatcaccaattcaacagtgtcgagcgagtcggcac 159028 Query: 425 c 425 | Sbjct: 159027 c 159027
>gb|AY623761.1| Rattus norvegicus defensin alpha 9 (Defa9) gene, complete cds Length = 4197 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 476 ccagctgcttcttgactatca 496 ||||||||||||||||||||| Sbjct: 3653 ccagctgcttcttgactatca 3673
>gb|AC010015.5| Drosophila melanogaster 3L BAC RP98-9C21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 132655 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 cgcagcaacaacacaaaatct 110 ||||||||||||||||||||| Sbjct: 112530 cgcagcaacaacacaaaatct 112550
>gb|AC010574.5| Drosophila melanogaster 3L BAC RP98-7L7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 162402 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 cgcagcaacaacacaaaatct 110 ||||||||||||||||||||| Sbjct: 32239 cgcagcaacaacacaaaatct 32259
>ref|NM_001038932.1| Drosophila melanogaster CG33982-RA (CG33982), mRNA Length = 1014 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 cgcagcaacaacacaaaatct 110 ||||||||||||||||||||| Sbjct: 677 cgcagcaacaacacaaaatct 697
>gb|BT006397.1| Arabidopsis thaliana At3g05020 gene, complete cds Length = 414 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 366 gatgttgaactcttcctcgaggcccatcacaatctcaaccgtgtc 410 |||||| ||||||||||| | ||||| || |||||||||||||| Sbjct: 327 gatgttaaactcttcctctaaacccattactatctcaaccgtgtc 283
>gb|AY085288.1| Arabidopsis thaliana clone 14291 mRNA, complete sequence Length = 703 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 366 gatgttgaactcttcctcgaggcccatcacaatctcaaccgtgtc 410 |||||| ||||||||||| | ||||| || |||||||||||||| Sbjct: 404 gatgttaaactcttcctctaaacccattactatctcaaccgtgtc 360
>gb|AE003530.3| Drosophila melanogaster chromosome 3L, section 55 of 83 of the complete sequence Length = 279152 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 cgcagcaacaacacaaaatct 110 ||||||||||||||||||||| Sbjct: 45271 cgcagcaacaacacaaaatct 45291
>gb|AE017353.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 13, complete sequence Length = 787999 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 505 ttgtcgactgtctctttctt 524 |||||||||||||||||||| Sbjct: 286765 ttgtcgactgtctctttctt 286784
>ref|XM_413956.1| PREDICTED: Gallus gallus similar to microtubule-associated protein 1 A; Microtubule-associated protein 1a (LOC415588), mRNA Length = 9518 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 agaggatgaagaaagaacaa 132 |||||||||||||||||||| Sbjct: 2499 agaggatgaagaaagaacaa 2518
>gb|AC112789.4| Mus musculus BAC clone RP23-151J21 from chromosome 7, complete sequence Length = 200592 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 aaaaatcagaagtccacaga 227 |||||||||||||||||||| Sbjct: 73658 aaaaatcagaagtccacaga 73639
>gb|AY487232.1| Arabidopsis arenosa isolate Aren3 RPP13-like protein gene, partial cds Length = 1816 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 tcttctctgtcacaagcttc 303 |||||||||||||||||||| Sbjct: 141 tcttctctgtcacaagcttc 122
>gb|AC160533.6| Mus musculus chromosome 5, clone RP24-242L17, complete sequence Length = 170409 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 ctgtctctttcttggcctgt 531 |||||||||||||||||||| Sbjct: 129256 ctgtctctttcttggcctgt 129237
>emb|CT010574.8| Mouse DNA sequence from clone RP23-269E16 on chromosome 16, complete sequence Length = 167912 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 513 tgtctctttcttggcctgtgcctc 536 ||||||| |||||||||||||||| Sbjct: 4773 tgtctctgtcttggcctgtgcctc 4750
>emb|CR388163.10| Zebrafish DNA sequence from clone CH211-247L8 in linkage group 15, complete sequence Length = 182247 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 551 aacaaatcttaaaccgaagc 570 |||||||||||||||||||| Sbjct: 169865 aacaaatcttaaaccgaagc 169846
>gb|AC122256.3| Mus musculus BAC clone RP23-178H7 from 7, complete sequence Length = 183325 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 aaaaatcagaagtccacaga 227 |||||||||||||||||||| Sbjct: 112130 aaaaatcagaagtccacaga 112111
>gb|AC007161.1| Homo sapiens BAC clone GS1-165B14 from 7, complete sequence Length = 109343 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gcagcaacaacacaaaatct 110 |||||||||||||||||||| Sbjct: 100037 gcagcaacaacacaaaatct 100056
>emb|AL356782.14| Human DNA sequence from clone RP11-47D15 on chromosome 6 Contains the 5' end of transforming protein P21A (K-RAS) (C-K-RAS) pseudogene, complete sequence Length = 128386 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 agaggatgaagaaagaacaa 132 |||||||||||||||||||| Sbjct: 88368 agaggatgaagaaagaacaa 88387
>emb|AL353150.25| Human DNA sequence from clone RP11-82L18 on chromosome 9 Contains the 3' end of a novel gene (SHC3) and a novel gene, complete sequence Length = 113051 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 ttcttgactatcatacaaac 503 |||||||||||||||||||| Sbjct: 22148 ttcttgactatcatacaaac 22129
>emb|AL157948.10| Human DNA sequence from clone RP4-686N16 on chromosome 1p31.3-33 Contains the 3' end of gene KIAA1365, complete sequence Length = 94870 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 tccataaattattttctctc 191 |||||||||||||||||||| Sbjct: 31193 tccataaattattttctctc 31174
>emb|BX571828.6| Zebrafish DNA sequence from clone DKEY-281I15 in linkage group 22, complete sequence Length = 212429 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 gaaagaacaaatggcaatga 142 |||||||||||||||||||| Sbjct: 39586 gaaagaacaaatggcaatga 39567
>gb|AC154456.2| Mus musculus BAC clone RP23-186O10 from chromosome 16, complete sequence Length = 193598 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 513 tgtctctttcttggcctgtgcctc 536 ||||||| |||||||||||||||| Sbjct: 107847 tgtctctgtcttggcctgtgcctc 107824
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 ccagatgacacctttgcctt 248 |||||||||||||||||||| Sbjct: 262309 ccagatgacacctttgcctt 262290
>gb|AC154588.2| Mus musculus BAC clone RP23-363L9 from chromosome 16, complete sequence Length = 200787 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 513 tgtctctttcttggcctgtgcctc 536 ||||||| |||||||||||||||| Sbjct: 13745 tgtctctgtcttggcctgtgcctc 13768
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 198 aatgcgaccgaaaaatcagaagtc 221 ||||||||||||||||| |||||| Sbjct: 28855872 aatgcgaccgaaaaatctgaagtc 28855849
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.5 Identities = 53/64 (82%) Strand = Plus / Plus Query: 342 ctgcgcgcttgtttcatcaacagtgatgttgaactcttcctcgaggcccatcacaatctc 401 ||||||||||| |||||| ||| |||| ||||| | || || || ||||| |||||||| Sbjct: 20953199 ctgcgcgcttgattcatcgacactgatcttgaaagcctcttcaagacccataacaatctc 20953258 Query: 402 aacc 405 |||| Sbjct: 20953259 aacc 20953262
>emb|BX816559.1|CNS0ABKW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH55ZF08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 643 Score = 40.1 bits (20), Expect = 8.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 372 gaactcttcctcgaggcccatcacaatctcaaccgt 407 |||||||||||| | |||||||||||||| ||||| Sbjct: 398 gaactcttcctctcgtcccatcacaatctccaccgt 363
>gb|AC147318.3| Pan troglodytes BAC clone RP43-49B14 from chromosome 7, complete sequence Length = 174811 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gcagcaacaacacaaaatct 110 |||||||||||||||||||| Sbjct: 139701 gcagcaacaacacaaaatct 139682
>gb|AC140001.8| Mus musculus chromosome 5, clone RP24-276E6, complete sequence Length = 130466 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 ctgtctctttcttggcctgt 531 |||||||||||||||||||| Sbjct: 127669 ctgtctctttcttggcctgt 127650
>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11 Length = 171257 Score = 40.1 bits (20), Expect = 8.5 Identities = 53/64 (82%) Strand = Plus / Plus Query: 342 ctgcgcgcttgtttcatcaacagtgatgttgaactcttcctcgaggcccatcacaatctc 401 ||||||||||| |||||| ||| |||| ||||| | || || || ||||| |||||||| Sbjct: 45288 ctgcgcgcttgattcatcgacactgatcttgaaagcctcttcaagacccataacaatctc 45347 Query: 402 aacc 405 |||| Sbjct: 45348 aacc 45351
>ref|NM_210016.1| Eremothecium gossypii AEL198Wp (AEL198W), mRNA Length = 1218 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 ccagatgacacctttgcctt 248 |||||||||||||||||||| Sbjct: 845 ccagatgacacctttgcctt 826
>gb|AF075251.1|AF075251 Venezuelan equine encephalitis virus strain Everglades Fe3-7c, complete genome Length = 11395 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 459 tgtaccatcagggactgcca 478 |||||||||||||||||||| Sbjct: 10944 tgtaccatcagggactgcca 10963
>emb|AL606640.4|OSJN00071 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019K04, complete sequence Length = 154865 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 198 aatgcgaccgaaaaatcagaagtc 221 ||||||||||||||||| |||||| Sbjct: 67934 aatgcgaccgaaaaatctgaagtc 67911
>gb|AC131654.7| Mus musculus BAC clone RP23-232K4 from 10, complete sequence Length = 205819 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 tgtctctttcttggcctgtg 532 |||||||||||||||||||| Sbjct: 126801 tgtctctttcttggcctgtg 126782
>gb|U48777.1|GHU48777 Gossypium hirsutum fiber-specific acyl carrier protein (ACP1) mRNA, complete cds Length = 713 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 376 tcttcctcgaggcccatcacaatctcaaccgt 407 |||||||| || |||| ||||||||||||||| Sbjct: 347 tcttcctcaagtcccaacacaatctcaaccgt 316
>emb|AL161871.6|CNS01RHN Human chromosome 14 DNA sequence BAC R-66E7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 148068 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 cagggactgccagctgcttc 486 |||||||||||||||||||| Sbjct: 44970 cagggactgccagctgcttc 44951
>gb|L04598.1|EEVE321X Venezuelan equine encephalitis (VEE) virus nucleocapsid protein; structural protein; glycopeptide cleavage byproduct (E3); envelope glycoprotein (E2 and E1) and polyprotein precursor mRNA Length = 3910 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 459 tgtaccatcagggactgcca 478 |||||||||||||||||||| Sbjct: 3459 tgtaccatcagggactgcca 3478 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,931,046 Number of Sequences: 3902068 Number of extensions: 5931046 Number of successful extensions: 104355 Number of sequences better than 10.0: 98 Number of HSP's better than 10.0 without gapping: 98 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 104025 Number of HSP's gapped (non-prelim): 328 length of query: 626 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 603 effective length of database: 17,143,297,704 effective search space: 10337408515512 effective search space used: 10337408515512 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)