ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags30i14 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_122206.2| Arabidopsis thaliana DNA binding / transcription factor AT5G23000 mRNA, complete cds Length = 1205 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 923 aggttgcttatcgaactagaaga 901
>gb|AY519628.1| Arabidopsis thaliana MYB transcription factor (At5g23000) mRNA, complete cds Length = 990 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 923 aggttgcttatcgaactagaaga 901
>gb|DQ446976.1| Arabidopsis thaliana clone pENTR221-At5g23000 myb family transcription factor (At5g23000) mRNA, complete cds Length = 990 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 923 aggttgcttatcgaactagaaga 901
>emb|AJ486936.1|ATH486936 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant yo-0 Length = 974 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 723 aggttgcttatcgaactagaaga 701
>emb|AJ486935.1|ATH486935 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant su-0 Length = 974 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 723 aggttgcttatcgaactagaaga 701
>emb|AJ486934.1|ATH486934 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant wl-0 Length = 941 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 763 aggttgcttatcgaactagaaga 741
>emb|AJ486933.1|ATH486933 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant tsu-1 Length = 1014 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 763 aggttgcttatcgaactagaaga 741
>emb|AJ486932.1|ATH486932 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant tac Length = 976 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 763 aggttgcttatcgaactagaaga 741
>emb|AJ486931.1|ATH486931 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant sorbo Length = 974 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 763 aggttgcttatcgaactagaaga 741
>emb|AJ486930.1|ATH486930 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant sei-0 Length = 981 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 763 aggttgcttatcgaactagaaga 741
>emb|AJ486929.1|ATH486929 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant pla-0 Length = 1015 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 763 aggttgcttatcgaactagaaga 741
>emb|AJ486928.1|ATH486928 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant pi-0 Length = 1015 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 763 aggttgcttatcgaactagaaga 741
>emb|AJ486927.1|ATH486927 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant petergof Length = 995 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 763 aggttgcttatcgaactagaaga 741
>emb|AJ486926.1|ATH486926 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant per-1 Length = 1014 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 763 aggttgcttatcgaactagaaga 741
>emb|AJ486925.1|ATH486925 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant pa-1 Length = 1014 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 763 aggttgcttatcgaactagaaga 741
>emb|AJ486924.1|ATH486924 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant oy-0 Length = 1015 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 763 aggttgcttatcgaactagaaga 741
>emb|AJ486923.1|ATH486923 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant no-0 Length = 1014 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 763 aggttgcttatcgaactagaaga 741
>emb|AJ486922.1|ATH486922 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant mt-0 Length = 976 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 763 aggttgcttatcgaactagaaga 741
>emb|AJ486921.1|ATH486921 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant mrk-0 Length = 974 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 723 aggttgcttatcgaactagaaga 701
>emb|AJ486920.1|ATH486920 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant mr-0 Length = 1003 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 763 aggttgcttatcgaactagaaga 741
>emb|AJ486919.1|ATH486919 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant ma-0 Length = 1015 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 763 aggttgcttatcgaactagaaga 741
>emb|AJ486918.1|ATH486918 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant lip-0 Length = 1014 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 763 aggttgcttatcgaactagaaga 741
>emb|AJ486917.1|ATH486917 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant condara Length = 1014 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 765 aggttgcttatcgaactagaaga 743
>emb|AJ486916.1|ATH486916 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant cnt-1 Length = 992 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 740 aggttgcttatcgaactagaaga 718
>emb|AJ486915.1|ATH486915 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant can-0 Length = 1014 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 763 aggttgcttatcgaactagaaga 741
>emb|AJ486914.1|ATH486914 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant cal-0 Length = 1017 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 765 aggttgcttatcgaactagaaga 743
>emb|AJ486913.1|ATH486913 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant bla-10 Length = 1017 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 765 aggttgcttatcgaactagaaga 743
>emb|AJ486912.1|ATH486912 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant bl-0 Length = 1017 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 765 aggttgcttatcgaactagaaga 743
>emb|AJ486911.1|ATH486911 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant ler Length = 1017 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 765 aggttgcttatcgaactagaaga 743
>emb|AJ486910.1|ATH486910 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant ag-0 Length = 976 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 765 aggttgcttatcgaactagaaga 743
>emb|AJ486909.1|ATH486909 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant kil-1 Length = 1014 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 763 aggttgcttatcgaactagaaga 741
>emb|AJ486908.1|ATH486908 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant kas-1 Length = 973 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 723 aggttgcttatcgaactagaaga 701
>emb|AJ486907.1|ATH486907 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant ka-0 Length = 1004 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 765 aggttgcttatcgaactagaaga 743
>emb|AJ486906.1|ATH486906 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant hodja Length = 1016 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 765 aggttgcttatcgaactagaaga 743
>emb|AJ486905.1|ATH486905 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant ema-1 Length = 1004 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 765 aggttgcttatcgaactagaaga 743
>emb|AJ486904.1|ATH486904 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant di-g Length = 993 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 741 aggttgcttatcgaactagaaga 719
>emb|AJ486902.1|ATH486902 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant di-0 Length = 993 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 741 aggttgcttatcgaactagaaga 719
>emb|AJ486901.1|ATH486901 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant cvi-0 Length = 991 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 740 aggttgcttatcgaactagaaga 718
>emb|AJ486900.1|ATH486900 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant aa-0 Length = 993 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 741 aggttgcttatcgaactagaaga 719
>emb|AJ131517.1|ATH131517 Arabidopsis thaliana MYB37 homologue gene and ORF1 Length = 19132 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 6672 aggttgcttatcgaactagaaga 6650
>emb|BX832392.1|CNS09YP1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH6ZG04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1697 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 1490 aggttgcttatcgaactagaaga 1468
>dbj|AK175507.1| Arabidopsis thaliana mRNA for myb like transcription factor (MYB37), complete cds, clone: RAFL21-93-G12 Length = 1143 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 1022 aggttgcttatcgaactagaaga 1000
>emb|AJ486903.1|ATH486903 Arabidopsis thaliana partial myb37 gene for MYB37 transcription factor, exon 3, population variant di-1 Length = 704 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 453 aggttgcttatcgaactagaaga 431
>dbj|AB026660.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:T20O7 Length = 18446 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 6064 aggttgcttatcgaactagaaga 6042
>gb|AF062879.1|AF062879 Arabidopsis thaliana putative transcription factor (MYB37) mRNA, partial cds Length = 1062 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 110 aggttgcttatcgaactagaaga 132 ||||||||||||||||||||||| Sbjct: 761 aggttgcttatcgaactagaaga 739
>gb|AC139335.3| Mus musculus BAC clone RP23-376N11 from chromosome 10, complete sequence Length = 195132 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 gcatatactacatacacaaac 77 ||||||||||||||||||||| Sbjct: 170303 gcatatactacatacacaaac 170323 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 gcatatactacatacacaaac 77 ||||||||||||||||||||| Sbjct: 170173 gcatatactacatacacaaac 170193
>emb|AL024473.1|HS707K17 Human DNA sequence from clone RP4-707K17 on chromosome 20q13.1 Contains part of the PTPRT gene for protein tyrosine phosphatase receptor type T, ESTs, STSs and GSSs, complete sequence Length = 107387 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 353 ggcctcatcatcatcagaata 373 ||||||||||||||||||||| Sbjct: 13668 ggcctcatcatcatcagaata 13648
>emb|BX539346.8| Zebrafish DNA sequence from clone DKEYP-73G7 in linkage group 23, complete sequence Length = 171486 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 caggacagttgttggcaccag 178 ||||||||||||||||||||| Sbjct: 168071 caggacagttgttggcaccag 168051
>emb|BX649634.8| Zebrafish DNA sequence from clone CH211-284G18 in linkage group 2, complete sequence Length = 154030 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 caggacagttgttggcaccag 178 ||||||||||||||||||||| Sbjct: 118844 caggacagttgttggcaccag 118824
>emb|BX293568.7| Zebrafish DNA sequence from clone CH211-215F13 in linkage group 20, complete sequence Length = 221849 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 caggacagttgttggcaccag 178 ||||||||||||||||||||| Sbjct: 199897 caggacagttgttggcaccag 199877
>emb|BX247907.8| Zebrafish DNA sequence from clone CH211-232D19 in linkage group 8, complete sequence Length = 169530 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 300 tttatattcttgtcaaattct 320 ||||||||||||||||||||| Sbjct: 51378 tttatattcttgtcaaattct 51358
>gb|AC147634.3| Mus musculus BAC clone RP23-305G22 from 10, complete sequence Length = 207157 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 gcatatactacatacacaaac 77 ||||||||||||||||||||| Sbjct: 137843 gcatatactacatacacaaac 137823 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 gcatatactacatacacaaac 77 ||||||||||||||||||||| Sbjct: 137713 gcatatactacatacacaaac 137693
>ref|NM_103690.2| Arabidopsis thaliana unknown protein AT1G47920 mRNA, complete cds Length = 1140 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cctcatcatcatcagaataa 374 |||||||||||||||||||| Sbjct: 544 cctcatcatcatcagaataa 525
>gb|DQ214212.1| Taeniopygia guttata clone 0065P0009H12 ribosomal protein L30-like mRNA, complete sequence Length = 642 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 aagcaggacagttgttggca 174 |||||||||||||||||||| Sbjct: 365 aagcaggacagttgttggca 346
>gb|DQ214211.1| Taeniopygia guttata clone 0058P0021E12 ribosomal protein L30-like mRNA, complete sequence Length = 567 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 aagcaggacagttgttggca 174 |||||||||||||||||||| Sbjct: 313 aagcaggacagttgttggca 294
>gb|DQ214210.1| Taeniopygia guttata clone 0058P0030G07 ribosomal protein L30-like mRNA, complete sequence Length = 577 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 aagcaggacagttgttggca 174 |||||||||||||||||||| Sbjct: 326 aagcaggacagttgttggca 307
>gb|AC093351.8| Mus musculus chromosome 7, clone RP23-16L19, complete sequence Length = 239688 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 catatactacatacacaaac 77 |||||||||||||||||||| Sbjct: 6678 catatactacatacacaaac 6659
>gb|AC139883.8| Mus musculus chromosome 16, clone RP24-304O16, complete sequence Length = 138043 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 agaaataaaactacagagac 149 |||||||||||||||||||| Sbjct: 81245 agaaataaaactacagagac 81226
>gb|AC138026.4| Mus musculus BAC clone RP24-501L6 from chromosome 10, complete sequence Length = 183477 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tagcatatactacatacaca 74 |||||||||||||||||||| Sbjct: 12100 tagcatatactacatacaca 12081
>ref|XM_546022.2| PREDICTED: Canis familiaris hypothetical LOC488905 (LOC488905), mRNA Length = 1374 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 tacagagacataagaagcag 160 |||||||||||||||||||| Sbjct: 1344 tacagagacataagaagcag 1325
>gb|DQ446338.1| Arabidopsis thaliana clone pENTR221-At1g47920 syntaxin-like family protein (At1g47920) mRNA, complete cds Length = 1026 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cctcatcatcatcagaataa 374 |||||||||||||||||||| Sbjct: 430 cctcatcatcatcagaataa 411
>gb|AC154226.3| Mus musculus BAC clone RP24-353J14 from chromosome 13, complete sequence Length = 196991 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ataagaagcaggacagttgt 169 |||||||||||||||||||| Sbjct: 152375 ataagaagcaggacagttgt 152394
>gb|AC079679.4|AC079679 Arabidopsis thaliana chromosome 1 BAC T6B12 genomic sequence, complete sequence Length = 30734 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cctcatcatcatcagaataa 374 |||||||||||||||||||| Sbjct: 21616 cctcatcatcatcagaataa 21597
>emb|BX005002.9| Zebrafish DNA sequence from clone CH211-130M12, complete sequence Length = 170274 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 gaagaaataaaactacagagacat 151 ||||||||||||||||||| |||| Sbjct: 43674 gaagaaataaaactacagacacat 43651
>emb|CR759840.6| Zebrafish DNA sequence from clone DKEY-239O7 in linkage group 25, complete sequence Length = 110071 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 gtcgccggcgagagagcgtg 439 |||||||||||||||||||| Sbjct: 29769 gtcgccggcgagagagcgtg 29750
>emb|Z71267.1|CEW01A8 Caenorhabditis elegans Cosmid W01A8, complete sequence Length = 25284 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 189 gcaacgtcgcacgccgtctcaattttat 216 ||||||||| ||||| |||||||||||| Sbjct: 1423 gcaacgtcggacgccttctcaattttat 1396
>gb|AC110039.13| Mus musculus chromosome 7, clone RP23-264N6, complete sequence Length = 173706 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 catatactacatacacaaac 77 |||||||||||||||||||| Sbjct: 27770 catatactacatacacaaac 27789
>emb|AL929309.6| Zebrafish DNA sequence from clone CH211-51L3 in linkage group 25, complete sequence Length = 191745 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 gtcgccggcgagagagcgtg 439 |||||||||||||||||||| Sbjct: 55279 gtcgccggcgagagagcgtg 55260
>gb|AC163644.4| Mus musculus BAC clone RP24-394I24 from chromosome 16, complete sequence Length = 177627 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 agaaataaaactacagagac 149 |||||||||||||||||||| Sbjct: 134922 agaaataaaactacagagac 134903
>dbj|AB006605.1| Petunia x hybrida mRNA for ZPT3-3, complete cds Length = 1200 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cctcatcatcatcagaataa 374 |||||||||||||||||||| Sbjct: 499 cctcatcatcatcagaataa 480
>dbj|AB035133.1| Petunia x hybrida gene for C2H2 zinc-finger protein ZPT3-3, complete cds Length = 3444 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cctcatcatcatcagaataa 374 |||||||||||||||||||| Sbjct: 2743 cctcatcatcatcagaataa 2724 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,970,104 Number of Sequences: 3902068 Number of extensions: 4970104 Number of successful extensions: 93505 Number of sequences better than 10.0: 71 Number of HSP's better than 10.0 without gapping: 71 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 93415 Number of HSP's gapped (non-prelim): 90 length of query: 458 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 436 effective length of database: 17,147,199,772 effective search space: 7476179100592 effective search space used: 7476179100592 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
