ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags30i13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT016492.1| Zea mays clone Contig325 mRNA sequence 206 6e-50
2gb|AY109375.1| Zea mays CL457_2 mRNA sequence 206 6e-50
3ref|NM_190270.1| Oryza sativa (japonica cultivar-group), predic... 196 6e-47
4dbj|AK104693.1| Oryza sativa (japonica cultivar-group) cDNA clon... 196 6e-47
5dbj|AK065268.1| Oryza sativa (japonica cultivar-group) cDNA clon... 188 1e-44
6emb|X64622.1|OS5SRRNMR O.sativa Rrl5 mRNA for 5S ribosomal RNA 182 8e-43
7ref|NM_190269.1| Oryza sativa (japonica cultivar-group), predic... 165 2e-37
8gb|BT016417.1| Zea mays clone Contig250 mRNA sequence 157 5e-35
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 157 5e-35
10dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic D... 157 5e-35
11dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic D... 157 5e-35
12dbj|AB049724.1| Pisum sativum ssa-15 mRNA for putative senescenc... 66 1e-07
13gb|AY365248.1| Cucumis sativus 60S ribosomal protein L5 mRNA, co... 60 8e-06
14gb|BT014015.1| Lycopersicon esculentum clone 133077F, mRNA sequence 54 5e-04
15gb|AY106024.1| Zea mays PCO063168 mRNA sequence 52 0.002
16gb|DQ228334.1| Solanum tuberosum clone 145F02 unknown mRNA 50 0.008
17emb|X95566.1|PS5SRNA P.sativum 5S rRNA gene 50 0.008
18ref|NM_113448.2| Arabidopsis thaliana ATL5 (A. THALIANA RIBOSOMA... 48 0.032
19gb|BT000411.1| Arabidopsis thaliana putative ribosomal protein (... 48 0.032
20gb|BT008705.1| Arabidopsis thaliana At3g25520 gene, complete cds 48 0.032
21gb|AY136319.1| Arabidopsis thaliana putative ribosomal protein (... 48 0.032
22gb|AY065103.1| Arabidopsis thaliana 60S ribosomal protein L5 (At... 48 0.032
23gb|AY081701.1| Arabidopsis thaliana 60S ribosomal protein L5 (At... 48 0.032
24gb|AY054161.1| Arabidopsis thaliana AT5g39740/MKM21_30 mRNA, com... 48 0.032
25dbj|AK221847.1| Arabidopsis thaliana mRNA for ribosomal protein,... 48 0.032
26gb|AY186611.1| Arabidopsis thaliana ribosomal protein L5 mRNA, c... 48 0.032
27emb|BX823967.1|CNS0A6W1 Arabidopsis thaliana Full-length cDNA Co... 48 0.032
28gb|BT002427.1| Arabidopsis thaliana ribosomal protein, putative ... 48 0.032
29dbj|AB025639.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 48 0.032
30gb|AY087197.1| Arabidopsis thaliana clone 32753 mRNA, complete s... 46 0.13
31emb|CT030195.12| Mouse DNA sequence from clone RP23-191J8 on chr... 44 0.49
32dbj|AB001583.1| Solanum melongena mRNA for ribosomal protein L5,... 44 0.49
33ref|XM_657651.1| Aspergillus nidulans FGSC A4 hypothetical prote... 42 2.0
34gb|BT012733.1| Lycopersicon esculentum clone 113662F, mRNA sequence 42 2.0
35emb|BX649413.8| Mouse DNA sequence from clone RP23-193P21 on chr... 42 2.0
36emb|AJ005499.1|ASA005499 Avena strigosa pAs14 repetitive DNA seq... 42 2.0
37gb|M60100.1|HRSMHDRA E.caballus MHC class II DR alpha chain (A2 ... 42 2.0
38ref|XM_638845.1| Dictyostelium discoideum hypothetical protein (... 40 7.7
39gb|AC091455.12| Mus musculus chromosome 1, clone RP23-23O9, comp... 40 7.7
40gb|BC049636.1| Mus musculus mitchondrial ribosomal protein S7, m... 40 7.7
41gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome 40 7.7
42ref|NM_025305.1| Mus musculus mitchondrial ribosomal protein S7 ... 40 7.7
43ref|XM_545753.2| PREDICTED: Canis familiaris similar to Sodium/p... 40 7.7
44ref|XM_855596.1| PREDICTED: Canis familiaris similar to Sodium/p... 40 7.7
45emb|Z81045.1|CEC36F7 Caenorhabditis elegans Cosmid C36F7, comple... 40 7.7
46gb|AC128700.4| Mus musculus BAC clone RP24-130A20 from chromosom... 40 7.7
47gb|AC124436.5| Mus musculus BAC clone RP24-252O24 from chromosom... 40 7.7
48gb|AC123042.2| Mus musculus BAC clone RP24-545O17 from 10, compl... 40 7.7
49gb|AY883559.2| Zea mays cultivar inbred line B73 teosinte glume ... 40 7.7
50gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 7.7
51gb|AC130456.2| Homo sapiens chromosome 16 clone CTA-363E6, compl... 40 7.7
52emb|AL121776.19|HSJ1050K3 Human DNA sequence from clone RP5-1050... 40 7.7
53gb|AC162866.5| Mus musculus chromosome 1, clone RP23-90B23, comp... 40 7.7
54gb|AC119275.12| Mus musculus chromosome 8, clone RP24-459A4, com... 40 7.7
55dbj|AK126270.1| Homo sapiens cDNA FLJ44282 fis, clone TRACH2003516 40 7.7
56dbj|AK162024.1| Mus musculus 12 days embryo female mullerian duc... 40 7.7
57gb|AC160128.2| Mus musculus BAC clone RP23-286G17 from chromosom... 40 7.7
58dbj|AK009251.1| Mus musculus adult male tongue cDNA, RIKEN full-... 40 7.7
59dbj|AK034688.1| Mus musculus 12 days embryo embryonic body betwe... 40 7.7
60ref|NM_060132.2| Caenorhabditis elegans IRoquois subclass of hom... 40 7.7
61ref|NM_178099.2| Danio rerio ATPase, Na+/K+ transporting, alpha ... 40 7.7
62gb|AC116986.2| Dictyostelium discoideum chromosome 2 map 2234041... 40 7.7
63gb|AC084452.1|AC084452 Caenorhabditis briggsae cosmid CB024D21, ... 40 7.7
64gb|AY094620.1| Danio rerio Na+/K+ ATPase alpha subunit isoform 9... 40 7.7
65gb|U91321.1|HUU91321 Human Chromosome 16 BAC clone CIT987SK-A-36... 40 7.7
66gb|DQ203519.1| Uncultured bacterium clone MedHO1-20-2-C3 predict... 40 7.7
67gb|AC155808.2| Mus musculus BAC clone RP24-267H3 from 12, comple... 40 7.7
68gb|AF051242.1|AF051242 Picea mariana probable 60S ribosomal prot... 40 7.7
69emb|AL645470.20| Mouse DNA sequence from clone RP23-392H19 on ch... 40 7.7
70gb|AC147634.3| Mus musculus BAC clone RP23-305G22 from 10, compl... 40 7.7
71gb|AC141564.4| Mus musculus BAC clone RP23-361B14 from 10, compl... 40 7.7
72dbj|AP004484.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 7.7 
>gb|BT016492.1| Zea mays clone Contig325 mRNA sequence
          Length = 1365

 Score =  206 bits (104), Expect = 6e-50
 Identities = 170/192 (88%)
 Strand = Plus / Minus

                                                                       
Query: 378 gagactggccttcctctgctcgtaggtcagcttcttgggattgtacctcttgtgcgtctt 437
           |||||||||||||||||||||||| ||||| |||||||| |||||||||||||||  |||
Sbjct: 902 gagactggccttcctctgctcgtatgtcagtttcttggggttgtacctcttgtgctcctt 843

                                                                       
Query: 438 tggtggttccttggttgattttgctattgtaggatcagcacgaatggcagcatgaacctt 497
           |||||| | ||||||||| ||  | |  | |||||||||||| ||||||||||| |||||
Sbjct: 842 tggtggctgcttggttgacttgaccacagaaggatcagcacggatggcagcatggacctt 783

                                                                       
Query: 498 cttgtacagtgcttccatgccatcagcctcgattcccttcttgatgtactcactgaagtg 557
           ||||||||| ||||||||| | |||||||| ||||||||||| |||||||||||||||||
Sbjct: 782 cttgtacagagcttccatgtcgtcagcctcaattcccttcttaatgtactcactgaagtg 723

                       
Query: 558 agattggtactt 569
           ||| ||||||||
Sbjct: 722 agactggtactt 711
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>gb|AY109375.1| Zea mays CL457_2 mRNA sequence
          Length = 1397

 Score =  206 bits (104), Expect = 6e-50
 Identities = 167/188 (88%)
 Strand = Plus / Minus

                                                                       
Query: 382 ctggccttcctctgctcgtaggtcagcttcttgggattgtacctcttgtgcgtctttggt 441
           ||||||||||||||||| || |||||||||||||| ||||||||||| |||  |||||||
Sbjct: 914 ctggccttcctctgctcatatgtcagcttcttggggttgtacctcttatgctcctttggt 855

                                                                       
Query: 442 ggttccttggttgattttgctattgtaggatcagcacgaatggcagcatgaaccttcttg 501
           || | ||||||||| ||  | || | |||||||||||| ||||||||||| |||||||||
Sbjct: 854 ggctgcttggttgacttgacaatggaaggatcagcacggatggcagcatggaccttcttg 795

                                                                       
Query: 502 tacagtgcttccatgccatcagcctcgattcccttcttgatgtactcactgaagtgagat 561
           ||||| ||||||||| |||||||||| ||||||||||| |||||||||||||||||||| 
Sbjct: 794 tacagagcttccatgtcatcagcctcaattcccttcttaatgtactcactgaagtgagac 735

                   
Query: 562 tggtactt 569
           ||||||||
Sbjct: 734 tggtactt 727
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>ref|NM_190270.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 906

 Score =  196 bits (99), Expect = 6e-47
 Identities = 192/223 (86%)
 Strand = Plus / Minus

                                                                       
Query: 335 catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 394
           ||||||||||| |||| |||||||| ||||| |  |  || || ||||||||||||||||
Sbjct: 877 catcagcaccagcagaggagttgagagcattcaatctttcgacaagactggccttcctct 818

                                                                       
Query: 395 gctcgtaggtcagcttcttgggattgtacctcttgtgcgtctttggtggttccttggttg 454
           | |||||||| ||||||||| | ||||| |||||||| |||   |||   | ||||||||
Sbjct: 817 gttcgtaggttagcttcttgaggttgtatctcttgtgggtcgccggttccttcttggttg 758

                                                                       
Query: 455 attttgctattgtaggatcagcacgaatggcagcatgaaccttcttgtacagtgcttcca 514
           |||| || || |||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 757 atttggccatggtaggatcagcacggatggcagcatggaccttcttgtacagtgcttcca 698

                                                      
Query: 515 tgccatcagcctcgattcccttcttgatgtactcactgaagtg 557
           |||||||||| || ||||||||||||| |||||||||||||||
Sbjct: 697 tgccatcagcatcaattcccttcttgaggtactcactgaagtg 655
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>dbj|AK104693.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-H05, full
           insert sequence
          Length = 1219

 Score =  196 bits (99), Expect = 6e-47
 Identities = 192/223 (86%)
 Strand = Plus / Minus

                                                                       
Query: 335 catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 394
           ||||||||||| |||| |||||||| ||||| |  |  || || ||||||||||||||||
Sbjct: 973 catcagcaccagcagaggagttgagagcattcaatctttcgacaagactggccttcctct 914

                                                                       
Query: 395 gctcgtaggtcagcttcttgggattgtacctcttgtgcgtctttggtggttccttggttg 454
           | |||||||| ||||||||| | ||||| |||||||| |||   |||   | ||||||||
Sbjct: 913 gttcgtaggttagcttcttgaggttgtatctcttgtgggtcgccggttccttcttggttg 854

                                                                       
Query: 455 attttgctattgtaggatcagcacgaatggcagcatgaaccttcttgtacagtgcttcca 514
           |||| || || |||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 853 atttggccatggtaggatcagcacggatggcagcatggaccttcttgtacagtgcttcca 794

                                                      
Query: 515 tgccatcagcctcgattcccttcttgatgtactcactgaagtg 557
           |||||||||| || ||||||||||||| |||||||||||||||
Sbjct: 793 tgccatcagcatcaattcccttcttgaggtactcactgaagtg 751
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>dbj|AK065268.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002K21, full
           insert sequence
          Length = 1219

 Score =  188 bits (95), Expect = 1e-44
 Identities = 158/179 (88%)
 Strand = Plus / Minus

                                                                       
Query: 379 agactggccttcctctgctcgtaggtcagcttcttgggattgtacctcttgtgcgtcttt 438
           ||||||||||||||||| |||||||| ||||||||| | ||||| |||||||| |||   
Sbjct: 930 agactggccttcctctgttcgtaggttagcttcttgaggttgtatctcttgtgggtcgcc 871

                                                                       
Query: 439 ggtggttccttggttgattttgctattgtaggatcagcacgaatggcagcatgaaccttc 498
           |||   | |||||||||||| || || |||||||||||||| ||||||||||| ||||||
Sbjct: 870 ggttccttcttggttgatttggccatggtaggatcagcacggatggcagcatggaccttc 811

                                                                      
Query: 499 ttgtacagtgcttccatgccatcagcctcgattcccttcttgatgtactcactgaagtg 557
           |||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||
Sbjct: 810 ttgtacagtgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtg 752
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>emb|X64622.1|OS5SRRNMR O.sativa Rrl5 mRNA for 5S ribosomal RNA
          Length = 1114

 Score =  182 bits (92), Expect = 8e-43
 Identities = 192/224 (85%), Gaps = 1/224 (0%)
 Strand = Plus / Minus

                                                                       
Query: 335 catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 394
           ||||||||||| |||| |||||||| ||||| |  |  || || ||||||||||||||||
Sbjct: 887 catcagcaccagcagaggagttgagagcattcaatctttcgacaagactggccttcctct 828

                                                                       
Query: 395 gctcgtaggtcagcttcttgggattgtacctcttgtgcgtctttggtggttccttggttg 454
           | |||||||| ||||||||| | ||||| |||||||| |||   |||   | ||||||||
Sbjct: 827 gttcgtaggttagcttcttgaggttgtatctcttgtgggtcgccggttccttcttggttg 768

                                                                       
Query: 455 attttgctattgtagg-atcagcacgaatggcagcatgaaccttcttgtacagtgcttcc 513
           |||| || || ||||| ||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 767 atttggccatggtagggatcagcacggatggcagcatggaccttcttgtacagtgcttcc 708

                                                       
Query: 514 atgccatcagcctcgattcccttcttgatgtactcactgaagtg 557
           ||||||||||| || ||||||||||||| |||||||||||||||
Sbjct: 707 atgccatcagcatcaattcccttcttgaggtactcactgaagtg 664
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>ref|NM_190269.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 915

 Score =  165 bits (83), Expect = 2e-37
 Identities = 188/223 (84%)
 Strand = Plus / Minus

                                                                       
Query: 335 catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 394
           ||||||||||| | || |||||||| ||||| |  |  || |||||||||||||||||||
Sbjct: 886 catcagcaccagcggaggagttgagagcattcaatctttcgacgagactggccttcctct 827

                                                                       
Query: 395 gctcgtaggtcagcttcttgggattgtacctcttgtgcgtctttggtggttccttggttg 454
           |||||||||||||||||||| | ||||| |||||||| ||    |||   | |||||| |
Sbjct: 826 gctcgtaggtcagcttcttgaggttgtatctcttgtgggtagccggttccttcttggtcg 767

                                                                       
Query: 455 attttgctattgtaggatcagcacgaatggcagcatgaaccttcttgtacagtgcttcca 514
           |||| || || |||||||| || || ||||||||||| |||||||||||||||| |||||
Sbjct: 766 atttggccatggtaggatcggcgcggatggcagcatggaccttcttgtacagtgattcca 707

                                                      
Query: 515 tgccatcagcctcgattcccttcttgatgtactcactgaagtg 557
           |||||||||| || ||||||||||||| ||||||||| |||||
Sbjct: 706 tgccatcagcgtcaattcccttcttgaggtactcactaaagtg 664
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>gb|BT016417.1| Zea mays clone Contig250 mRNA sequence
          Length = 1212

 Score =  157 bits (79), Expect = 5e-35
 Identities = 187/223 (83%)
 Strand = Plus / Minus

                                                                       
Query: 335 catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 394
           ||||||||||||| || ||||||||    |||||||  || | ||| |||||||||||||
Sbjct: 960 catcagcaccaccggaggagttgagttggttgagcctttcaatgaggctggccttcctct 901

                                                                       
Query: 395 gctcgtaggtcagcttcttgggattgtacctcttgtgcgtctttggtggttccttggttg 454
           |||| || |||||||||||||| ||||||||||| |||  ||||||||| | ||||||||
Sbjct: 900 gctcatatgtcagcttcttggggttgtacctcttatgctcctttggtggctgcttggttg 841

                                                                       
Query: 455 attttgctattgtaggatcagcacgaatggcagcatgaaccttcttgtacagtgcttcca 514
           | ||  | || | |||||| ||||| ||||||||||| |||||||||||||| ||||| |
Sbjct: 840 acttaacaatggaaggatcggcacggatggcagcatggaccttcttgtacagcgcttcta 781

                                                      
Query: 515 tgccatcagcctcgattcccttcttgatgtactcactgaagtg 557
           |  |||||||||| | ||||||||| |||||| ||||||||||
Sbjct: 780 tttcatcagcctcaactcccttcttaatgtacgcactgaagtg 738
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  157 bits (79), Expect = 5e-35
 Identities = 103/111 (92%)
 Strand = Plus / Minus

                                                                            
Query: 447      cttggttgattttgctattgtaggatcagcacgaatggcagcatgaaccttcttgtacag 506
                |||||||||||| || || |||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 38969192 cttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttgtacag 38969133

                                                                   
Query: 507      tgcttccatgccatcagcctcgattcccttcttgatgtactcactgaagtg 557
                |||||||||||||||||| || ||||||||||||| |||||||||||||||
Sbjct: 38969132 tgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtg 38969082



 Score =  117 bits (59), Expect = 4e-23
 Identities = 98/111 (88%)
 Strand = Plus / Minus

                                                                            
Query: 447      cttggttgattttgctattgtaggatcagcacgaatggcagcatgaaccttcttgtacag 506
                |||||| ||||| || || |||||||| || || ||||||||||| ||||||||||||||
Sbjct: 38963860 cttggtcgatttggccatggtaggatcggcgcggatggcagcatggaccttcttgtacag 38963801

                                                                   
Query: 507      tgcttccatgccatcagcctcgattcccttcttgatgtactcactgaagtg 557
                || ||||||||||||||| || ||||||||||||| ||||||||| |||||
Sbjct: 38963800 tgattccatgccatcagcgtcaattcccttcttgaggtactcactaaagtg 38963750



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                            
Query: 335      catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 394
                ||||||||||| | || |||||||| ||||| |  |  || |||||||||||||||||||
Sbjct: 38964058 catcagcaccagcggaggagttgagagcattcaatctttcgacgagactggccttcctct 38963999

                                    
Query: 395      gctcgtaggtcagcttcttg 414
                ||||||||||||||||||||
Sbjct: 38963998 gctcgtaggtcagcttcttg 38963979



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                            
Query: 335      catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 394
                ||||||||||| |||| |||||||| ||||| |  |  || || ||||||||||||||||
Sbjct: 38969388 catcagcaccagcagaggagttgagagcattcaatctttcgacaagactggccttcctct 38969329

                                    
Query: 395      gctcgtaggtcagcttcttg 414
                | |||||||| |||||||||
Sbjct: 38969328 gttcgtaggttagcttcttg 38969309
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>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0674H09
          Length = 142955

 Score =  157 bits (79), Expect = 5e-35
 Identities = 103/111 (92%)
 Strand = Plus / Minus

                                                                         
Query: 447   cttggttgattttgctattgtaggatcagcacgaatggcagcatgaaccttcttgtacag 506
             |||||||||||| || || |||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 42825 cttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttgtacag 42766

                                                                
Query: 507   tgcttccatgccatcagcctcgattcccttcttgatgtactcactgaagtg 557
             |||||||||||||||||| || ||||||||||||| |||||||||||||||
Sbjct: 42765 tgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtg 42715



 Score =  117 bits (59), Expect = 4e-23
 Identities = 98/111 (88%)
 Strand = Plus / Minus

                                                                         
Query: 447   cttggttgattttgctattgtaggatcagcacgaatggcagcatgaaccttcttgtacag 506
             |||||| ||||| || || |||||||| || || ||||||||||| ||||||||||||||
Sbjct: 37493 cttggtcgatttggccatggtaggatcggcgcggatggcagcatggaccttcttgtacag 37434

                                                                
Query: 507   tgcttccatgccatcagcctcgattcccttcttgatgtactcactgaagtg 557
             || ||||||||||||||| || ||||||||||||| ||||||||| |||||
Sbjct: 37433 tgattccatgccatcagcgtcaattcccttcttgaggtactcactaaagtg 37383



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                         
Query: 335   catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 394
             ||||||||||| | || |||||||| ||||| |  |  || |||||||||||||||||||
Sbjct: 37691 catcagcaccagcggaggagttgagagcattcaatctttcgacgagactggccttcctct 37632

                                 
Query: 395   gctcgtaggtcagcttcttg 414
             ||||||||||||||||||||
Sbjct: 37631 gctcgtaggtcagcttcttg 37612



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                         
Query: 335   catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 394
             ||||||||||| |||| |||||||| ||||| |  |  || || ||||||||||||||||
Sbjct: 43021 catcagcaccagcagaggagttgagagcattcaatctttcgacaagactggccttcctct 42962

                                 
Query: 395   gctcgtaggtcagcttcttg 414
             | |||||||| |||||||||
Sbjct: 42961 gttcgtaggttagcttcttg 42942
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>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0696G06
          Length = 142571

 Score =  157 bits (79), Expect = 5e-35
 Identities = 103/111 (92%)
 Strand = Plus / Minus

                                                                          
Query: 447    cttggttgattttgctattgtaggatcagcacgaatggcagcatgaaccttcttgtacag 506
              |||||||||||| || || |||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 133978 cttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttgtacag 133919

                                                                 
Query: 507    tgcttccatgccatcagcctcgattcccttcttgatgtactcactgaagtg 557
              |||||||||||||||||| || ||||||||||||| |||||||||||||||
Sbjct: 133918 tgcttccatgccatcagcatcaattcccttcttgaggtactcactgaagtg 133868



 Score =  117 bits (59), Expect = 4e-23
 Identities = 98/111 (88%)
 Strand = Plus / Minus

                                                                          
Query: 447    cttggttgattttgctattgtaggatcagcacgaatggcagcatgaaccttcttgtacag 506
              |||||| ||||| || || |||||||| || || ||||||||||| ||||||||||||||
Sbjct: 128646 cttggtcgatttggccatggtaggatcggcgcggatggcagcatggaccttcttgtacag 128587

                                                                 
Query: 507    tgcttccatgccatcagcctcgattcccttcttgatgtactcactgaagtg 557
              || ||||||||||||||| || ||||||||||||| ||||||||| |||||
Sbjct: 128586 tgattccatgccatcagcgtcaattcccttcttgaggtactcactaaagtg 128536



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                          
Query: 335    catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 394
              ||||||||||| | || |||||||| ||||| |  |  || |||||||||||||||||||
Sbjct: 128844 catcagcaccagcggaggagttgagagcattcaatctttcgacgagactggccttcctct 128785

                                  
Query: 395    gctcgtaggtcagcttcttg 414
              ||||||||||||||||||||
Sbjct: 128784 gctcgtaggtcagcttcttg 128765



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                          
Query: 335    catcagcaccaccagatgagttgagggcattgagccgctctacgagactggccttcctct 394
              ||||||||||| |||| |||||||| ||||| |  |  || || ||||||||||||||||
Sbjct: 134174 catcagcaccagcagaggagttgagagcattcaatctttcgacaagactggccttcctct 134115

                                  
Query: 395    gctcgtaggtcagcttcttg 414
              | |||||||| |||||||||
Sbjct: 134114 gttcgtaggttagcttcttg 134095
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>dbj|AB049724.1| Pisum sativum ssa-15 mRNA for putative senescence-associated
           protein, complete cds
          Length = 1100

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                       
Query: 475 gcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgattccc 534
           |||||||| |||||||||||||||||||| ||| | || || |||||||| || || || 
Sbjct: 805 gcacgaattgcagcatgaaccttcttgtaaagttcctcaattccatcagcttctatccct 746

                                    
Query: 535 ttcttgatgtactcactgaagtgag 559
           |||||||| || | |||||||||||
Sbjct: 745 ttcttgatatattgactgaagtgag 721
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>gb|AY365248.1| Cucumis sativus 60S ribosomal protein L5 mRNA, complete cds
          Length = 1171

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                         
Query: 518 catcagcctcgattcccttcttgatgtactcactgaagtgagattg 563
           |||| ||||| || ||||||||||||||||| ||||||||||||||
Sbjct: 721 catcggcctcaatgcccttcttgatgtactcgctgaagtgagattg 676
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>gb|BT014015.1| Lycopersicon esculentum clone 133077F, mRNA sequence
          Length = 1274

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 475 gcacgaatggcagcatgaaccttcttgtaca 505
           ||||| |||||||||||||||||||||||||
Sbjct: 854 gcacgtatggcagcatgaaccttcttgtaca 824



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 403 gtcagcttcttgggattgtacctcttgtgcgtctt 437
           |||||||||||  ||||||||||||||||| ||||
Sbjct: 926 gtcagcttcttcagattgtacctcttgtgcttctt 892
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>gb|AY106024.1| Zea mays PCO063168 mRNA sequence
          Length = 620

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 532 cccttcttgatgtactcactgaagtgagattggtactt 569
           ||||||||||||||||| ||||||||||  ||||||||
Sbjct: 587 cccttcttgatgtactcgctgaagtgagcctggtactt 550
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>gb|DQ228334.1| Solanum tuberosum clone 145F02 unknown mRNA
          Length = 1114

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 481 atggcagcatgaaccttcttgtaca 505
           |||||||||||||||||||||||||
Sbjct: 771 atggcagcatgaaccttcttgtaca 747
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>emb|X95566.1|PS5SRNA P.sativum 5S rRNA gene
          Length = 1115

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 475 gcacgaatggcagcatgaaccttcttgta 503
           |||||||| ||||||||||||||||||||
Sbjct: 758 gcacgaattgcagcatgaaccttcttgta 730
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>ref|NM_113448.2| Arabidopsis thaliana ATL5 (A. THALIANA RIBOSOMAL PROTEIN L5);
           structural constituent of ribosome AT3G25520 (ATL5)
           mRNA, complete cds
          Length = 1254

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 472 tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 531
           ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 808 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 749

                                       
Query: 532 cccttcttgatgtactcactgaagtgag 559
           || |||||||||||  ||||||||||||
Sbjct: 748 cctttcttgatgtaagcactgaagtgag 721
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>gb|BT000411.1| Arabidopsis thaliana putative ribosomal protein (At3g25520) mRNA,
           complete cds
          Length = 969

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 472 tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 531
           ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 746 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 687

                                       
Query: 532 cccttcttgatgtactcactgaagtgag 559
           || |||||||||||  ||||||||||||
Sbjct: 686 cctttcttgatgtaagcactgaagtgag 659
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>gb|BT008705.1| Arabidopsis thaliana At3g25520 gene, complete cds
          Length = 906

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 472 tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 531
           ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 746 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 687

                                       
Query: 532 cccttcttgatgtactcactgaagtgag 559
           || |||||||||||  ||||||||||||
Sbjct: 686 cctttcttgatgtaagcactgaagtgag 659
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>gb|AY136319.1| Arabidopsis thaliana putative ribosomal protein (At3g25520) mRNA,
           complete cds
          Length = 1161

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 472 tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 531
           ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 805 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 746

                                       
Query: 532 cccttcttgatgtactcactgaagtgag 559
           || |||||||||||  ||||||||||||
Sbjct: 745 cctttcttgatgtaagcactgaagtgag 718
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>gb|AY065103.1| Arabidopsis thaliana 60S ribosomal protein L5 (At3g25550) mRNA,
           complete cds
          Length = 1151

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 472 tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 531
           ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 803 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 744

                                       
Query: 532 cccttcttgatgtactcactgaagtgag 559
           || |||||||||||  ||||||||||||
Sbjct: 743 cctttcttgatgtaagcactgaagtgag 716
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>gb|AY081701.1| Arabidopsis thaliana 60S ribosomal protein L5 (At3g25550) mRNA,
           complete cds
          Length = 925

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 472 tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 531
           ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 746 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 687

                                       
Query: 532 cccttcttgatgtactcactgaagtgag 559
           || |||||||||||  ||||||||||||
Sbjct: 686 cctttcttgatgtaagcactgaagtgag 659
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>gb|AY054161.1| Arabidopsis thaliana AT5g39740/MKM21_30 mRNA, complete cds
          Length = 1108

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 472 tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 531
           ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 793 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 734

                                       
Query: 532 cccttcttgatgtactcactgaagtgag 559
           || |||||||||||  ||||||||||||
Sbjct: 733 cctttcttgatgtaagcactgaagtgag 706
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>dbj|AK221847.1| Arabidopsis thaliana mRNA for ribosomal protein, complete cds,
           clone: RAFL22-05-O03
          Length = 517

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 472 tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 531
           ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 177 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 118

                                       
Query: 532 cccttcttgatgtactcactgaagtgag 559
           || |||||||||||  ||||||||||||
Sbjct: 117 cctttcttgatgtaagcactgaagtgag 90
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>gb|AY186611.1| Arabidopsis thaliana ribosomal protein L5 mRNA, complete cds
          Length = 906

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 472 tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 531
           ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 746 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 687

                                       
Query: 532 cccttcttgatgtactcactgaagtgag 559
           || |||||||||||  ||||||||||||
Sbjct: 686 cctttcttgatgtaagcactgaagtgag 659
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>emb|BX823967.1|CNS0A6W1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH10ZG11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1076

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 472 tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 531
           ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 778 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 719

                                       
Query: 532 cccttcttgatgtactcactgaagtgag 559
           || |||||||||||  ||||||||||||
Sbjct: 718 cctttcttgatgtaagcactgaagtgag 691
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>gb|BT002427.1| Arabidopsis thaliana ribosomal protein, putative (At3g25520) mRNA,
           complete cds
          Length = 1117

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 472 tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 531
           ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 803 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 744

                                       
Query: 532 cccttcttgatgtactcactgaagtgag 559
           || |||||||||||  ||||||||||||
Sbjct: 743 cctttcttgatgtaagcactgaagtgag 716
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>dbj|AB025639.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MWL2
          Length = 84896

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 72/88 (81%)
 Strand = Plus / Plus

                                                                         
Query: 472   tcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgatt 531
             ||||||||||| || || ||||||||||||||||   | || ||||  ||||| || | |
Sbjct: 56590 tcagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaact 56649

                                         
Query: 532   cccttcttgatgtactcactgaagtgag 559
             || |||||||||||  ||||||||||||
Sbjct: 56650 cctttcttgatgtaagcactgaagtgag 56677
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>gb|AY087197.1| Arabidopsis thaliana clone 32753 mRNA, complete sequence
          Length = 1248

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 71/87 (81%)
 Strand = Plus / Minus

                                                                       
Query: 473 cagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatcagcctcgattc 532
           |||||||||| || || ||||||||||||||||   | || ||||  ||||| || | ||
Sbjct: 807 cagcacgaatagctgcgtgaaccttcttgtacaactcctcaatgctctcagcttcaactc 748

                                      
Query: 533 ccttcttgatgtactcactgaagtgag 559
           | |||||||||||  ||||||||||||
Sbjct: 747 ctttcttgatgtaagcactgaagtgag 721
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>emb|CT030195.12| Mouse DNA sequence from clone RP23-191J8 on chromosome 13, complete
              sequence
          Length = 219800

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 155    cagaacggtactcaaaaccaagggggcagg 184
              ||||| || |||||||||||||||||||||
Sbjct: 138517 cagaatgggactcaaaaccaagggggcagg 138546
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>dbj|AB001583.1| Solanum melongena mRNA for ribosomal protein L5, partial cds
          Length = 399

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 400 taggtcagcttcttgggattgtacctcttgtgcgtctt 437
           ||||||||||||||  | |||||||||||||| |||||
Sbjct: 276 taggtcagcttcttaaggttgtacctcttgtgtgtctt 239



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 481 atggcagcatgaaccttcttgtaca 505
           |||||||| ||||||||||||||||
Sbjct: 195 atggcagcgtgaaccttcttgtaca 171
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>ref|XM_657651.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5139.2), mRNA
          Length = 3624

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 308  actctcattcatcgtcgtcttcatc 332
            ||||||||||||| |||||||||||
Sbjct: 3164 actctcattcatcttcgtcttcatc 3188
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>gb|BT012733.1| Lycopersicon esculentum clone 113662F, mRNA sequence
          Length = 1161

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 481 atggcagcatgaaccttcttgtaca 505
           ||||||||||||||||| |||||||
Sbjct: 794 atggcagcatgaacctttttgtaca 770
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>emb|BX649413.8| Mouse DNA sequence from clone RP23-193P21 on chromosome 4 Contains the
             5' end of the Dbccr1 gene for deleted in bladder cancer 1,
             complete sequence
          Length = 186197

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 137   taagataatccagaactccag 157
             |||||||||||||||||||||
Sbjct: 81236 taagataatccagaactccag 81216
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>emb|AJ005499.1|ASA005499 Avena strigosa pAs14 repetitive DNA sequence
          Length = 639

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 437 ttggtggttccttggttgattttgc 461
           ||||||||||||||| |||||||||
Sbjct: 341 ttggtggttccttgggtgattttgc 317
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>gb|M60100.1|HRSMHDRA E.caballus MHC class II DR alpha chain (A2 haplotype) gene, 3' end
          Length = 2006

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 530 ttcccttcttgatgtactcac 550
           |||||||||||||||||||||
Sbjct: 906 ttcccttcttgatgtactcac 926
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>ref|XM_638845.1| Dictyostelium discoideum hypothetical protein (DDB0217483), partial
            mRNA
          Length = 4395

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 316  tcatcgtcgtcttcatcgacatca 339
            ||||| ||||||||||||||||||
Sbjct: 1936 tcatcatcgtcttcatcgacatca 1959
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>gb|AC091455.12| Mus musculus chromosome 1, clone RP23-23O9, complete sequence
          Length = 257924

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 378   gagactggccttcctctgct 397
             ||||||||||||||||||||
Sbjct: 17640 gagactggccttcctctgct 17621
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>gb|BC049636.1| Mus musculus mitchondrial ribosomal protein S7, mRNA (cDNA clone
            MGC:58388 IMAGE:6532964), complete cds
          Length = 1355

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 206  aacttgagcaaaaatgcctctcac 229
            ||||||||||||| ||||||||||
Sbjct: 1121 aacttgagcaaaactgcctctcac 1144
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>gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome
          Length = 1545895

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 92     aacaaaccctgaagcaatgt 111
              ||||||||||||||||||||
Sbjct: 958761 aacaaaccctgaagcaatgt 958742
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>ref|NM_025305.1| Mus musculus mitchondrial ribosomal protein S7 (Mrps7), mRNA
          Length = 1355

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 206  aacttgagcaaaaatgcctctcac 229
            ||||||||||||| ||||||||||
Sbjct: 1121 aacttgagcaaaactgcctctcac 1144
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>ref|XM_545753.2| PREDICTED: Canis familiaris similar to Sodium/potassium-transporting
            ATPase alpha-2 chain precursor (Sodium pump 2) (Na+/K+
            ATPase 2), transcript variant 1 (LOC488636), mRNA
          Length = 3039

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 386  ccttcctctgctcgtaggtc 405
            ||||||||||||||||||||
Sbjct: 2815 ccttcctctgctcgtaggtc 2796
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>ref|XM_855596.1| PREDICTED: Canis familiaris similar to Sodium/potassium-transporting
            ATPase alpha-2 chain precursor (Sodium pump 2) (Na+/K+
            ATPase 2), transcript variant 2 (LOC488636), mRNA
          Length = 2949

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 386  ccttcctctgctcgtaggtc 405
            ||||||||||||||||||||
Sbjct: 2833 ccttcctctgctcgtaggtc 2814
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>emb|Z81045.1|CEC36F7 Caenorhabditis elegans Cosmid C36F7, complete sequence
          Length = 39211

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 316  tcatcgtcgtcttcatcgacatca 339
            |||||||||||||||||| |||||
Sbjct: 1300 tcatcgtcgtcttcatcgtcatca 1323
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>gb|AC128700.4| Mus musculus BAC clone RP24-130A20 from chromosome 8, complete sequence
          Length = 161757

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 441    tggttccttggttgattttg 460
              ||||||||||||||||||||
Sbjct: 134118 tggttccttggttgattttg 134137
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>gb|AC124436.5| Mus musculus BAC clone RP24-252O24 from chromosome 10, complete
             sequence
          Length = 174497

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    aaaccctgaagcaatgtcaa 114
             ||||||||||||||||||||
Sbjct: 30387 aaaccctgaagcaatgtcaa 30368
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>gb|AC123042.2| Mus musculus BAC clone RP24-545O17 from 10, complete sequence
          Length = 177899

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 95    aaaccctgaagcaatgtcaaaatg 118
             |||||| |||||||||||||||||
Sbjct: 57136 aaacccagaagcaatgtcaaaatg 57159
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>gb|AY883559.2| Zea mays cultivar inbred line B73 teosinte glume architecture 1 (tga1)
             gene, complete cds
          Length = 169976

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 443   gttccttggttgattttgct 462
             ||||||||||||||||||||
Sbjct: 35316 gttccttggttgattttgct 35297
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 363     attgagccgctctacgagac 382
               ||||||||||||||||||||
Sbjct: 4242294 attgagccgctctacgagac 4242313
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>gb|AC130456.2| Homo sapiens chromosome 16 clone CTA-363E6, complete sequence
          Length = 220579

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 270    aagcatgaagacagcactat 289
              ||||||||||||||||||||
Sbjct: 133716 aagcatgaagacagcactat 133697
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>emb|AL121776.19|HSJ1050K3 Human DNA sequence from clone RP5-1050K3 on chromosome 20 Contains part
             of the EYA2 gene for eyes absent homolog 2 (Drosophila), a
             glyceraldehyde 3-phosphate dehydrogenase (GAPDH)
             pseudogene and an RPL27A (ribosomal protein L27A)
             pseudogene, complete sequence
          Length = 143981

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 135   tttaagataatccagaactccaga 158
             |||||||||| |||||||||||||
Sbjct: 56872 tttaagataaaccagaactccaga 56849
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>gb|AC162866.5| Mus musculus chromosome 1, clone RP23-90B23, complete sequence
          Length = 230597

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 378   gagactggccttcctctgct 397
             ||||||||||||||||||||
Sbjct: 56125 gagactggccttcctctgct 56144
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>gb|AC119275.12| Mus musculus chromosome 8, clone RP24-459A4, complete sequence
          Length = 203937

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 441   tggttccttggttgattttg 460
             ||||||||||||||||||||
Sbjct: 33502 tggttccttggttgattttg 33521
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>dbj|AK126270.1| Homo sapiens cDNA FLJ44282 fis, clone TRACH2003516
          Length = 2555

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 270  aagcatgaagacagcactat 289
            ||||||||||||||||||||
Sbjct: 1586 aagcatgaagacagcactat 1567
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>dbj|AK162024.1| Mus musculus 12 days embryo female mullerian duct includes
            surrounding region cDNA, RIKEN full-length enriched
            library, clone:6820413L12 product:mitchondrial ribosomal
            protein S7, full insert sequence
          Length = 1715

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 206  aacttgagcaaaaatgcctctcac 229
            ||||||||||||| ||||||||||
Sbjct: 1100 aacttgagcaaaactgcctctcac 1123
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>gb|AC160128.2| Mus musculus BAC clone RP23-286G17 from chromosome 12, complete sequence
          Length = 202315

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 550    ctgaagtgagattggtactt 569
              ||||||||||||||||||||
Sbjct: 167993 ctgaagtgagattggtactt 168012
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>dbj|AK009251.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched
            library, clone:2310009G03 product:mitchondrial ribosomal
            protein S7, full insert sequence
          Length = 1288

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 206  aacttgagcaaaaatgcctctcac 229
            ||||||||||||| ||||||||||
Sbjct: 1086 aacttgagcaaaactgcctctcac 1109
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>dbj|AK034688.1| Mus musculus 12 days embryo embryonic body between diaphragm region
            and neck cDNA, RIKEN full-length enriched library,
            clone:9430024N04 product:unclassifiable, full insert
            sequence
          Length = 2042

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 441  tggttccttggttgattttg 460
            ||||||||||||||||||||
Sbjct: 1763 tggttccttggttgattttg 1744
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>ref|NM_060132.2| Caenorhabditis elegans IRoquois subclass of homeoboX family member
           (irx-1) (irx-1) mRNA, complete cds
          Length = 1150

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 316 tcatcgtcgtcttcatcgacatca 339
           |||||||||||||||||| |||||
Sbjct: 675 tcatcgtcgtcttcatcgtcatca 652
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>ref|NM_178099.2| Danio rerio ATPase, Na+/K+ transporting, alpha 1a.5 polypeptide
            (atp1a1a.5), mRNA
          Length = 3838

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 386  ccttcctctgctcgtaggtc 405
            ||||||||||||||||||||
Sbjct: 2810 ccttcctctgctcgtaggtc 2791
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>gb|AC116986.2| Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4,
              complete sequence
          Length = 333321

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 316    tcatcgtcgtcttcatcgacatca 339
              ||||| ||||||||||||||||||
Sbjct: 171756 tcatcatcgtcttcatcgacatca 171779
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>gb|AC084452.1|AC084452 Caenorhabditis briggsae cosmid CB024D21, complete sequence
          Length = 93590

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 320   cgtcgtcttcatcgacatca 339
             ||||||||||||||||||||
Sbjct: 76007 cgtcgtcttcatcgacatca 76026
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>gb|AY094620.1| Danio rerio Na+/K+ ATPase alpha subunit isoform 9 (atp1a1a.5) mRNA,
            complete cds
          Length = 3838

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 386  ccttcctctgctcgtaggtc 405
            ||||||||||||||||||||
Sbjct: 2810 ccttcctctgctcgtaggtc 2791
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>gb|U91321.1|HUU91321 Human Chromosome 16 BAC clone CIT987SK-A-363E6, complete sequence
          Length = 220633

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 270    aagcatgaagacagcactat 289
              ||||||||||||||||||||
Sbjct: 133766 aagcatgaagacagcactat 133747
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>gb|DQ203519.1| Uncultured bacterium clone MedHO1-20-2-C3 predicted proteorhodopsin
           gene, partial cds
          Length = 324

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 135 tttaagataatccagaactc 154
           ||||||||||||||||||||
Sbjct: 62  tttaagataatccagaactc 43
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>gb|AC155808.2| Mus musculus BAC clone RP24-267H3 from 12, complete sequence
          Length = 184888

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 550    ctgaagtgagattggtactt 569
              ||||||||||||||||||||
Sbjct: 130083 ctgaagtgagattggtactt 130064
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>gb|AF051242.1|AF051242 Picea mariana probable 60S ribosomal protein L5 (Sb58) mRNA,
           partial cds
          Length = 556

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 478 cgaatggcagcatgaaccttcttgtaca 505
           |||||||||||||| || ||||||||||
Sbjct: 118 cgaatggcagcatgcactttcttgtaca 91
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>emb|AL645470.20| Mouse DNA sequence from clone RP23-392H19 on chromosome 11, complete
             sequence
          Length = 198031

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 206   aacttgagcaaaaatgcctctcac 229
             ||||||||||||| ||||||||||
Sbjct: 17403 aacttgagcaaaactgcctctcac 17380
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>gb|AC147634.3| Mus musculus BAC clone RP23-305G22 from 10, complete sequence
          Length = 207157

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    aaaccctgaagcaatgtcaa 114
             ||||||||||||||||||||
Sbjct: 73655 aaaccctgaagcaatgtcaa 73674
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>gb|AC141564.4| Mus musculus BAC clone RP23-361B14 from 10, complete sequence
          Length = 210784

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 95     aaaccctgaagcaatgtcaaaatg 118
              |||||| |||||||||||||||||
Sbjct: 190292 aaacccagaagcaatgtcaaaatg 190315
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>dbj|AP004484.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT06I17, TM0017,
             complete sequence
          Length = 121127

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 83/104 (79%)
 Strand = Plus / Plus

                                                                         
Query: 463   attgtaggatcagcacgaatggcagcatgaaccttcttgtacagtgcttccatgccatca 522
             ||||| ||||| |||||||| |||||||| ||||| ||||| ||  | || |  ||||||
Sbjct: 46403 attgtgggatctgcacgaatagcagcatggacctttttgtatagatcctcaagtccatca 46462

                                                         
Query: 523   gcctcgattcccttcttgatgtactcactgaagtgagattggta 566
             ||||| || ||   |||||| || ||||||||||| || |||||
Sbjct: 46463 gcctctatcccgcgcttgatatattcactgaagtgtgactggta 46506


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,884,866
Number of Sequences: 3902068
Number of extensions: 4884866
Number of successful extensions: 91488
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 91257
Number of HSP's gapped (non-prelim): 206
length of query: 569
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 546
effective length of database: 17,143,297,704
effective search space: 9360240546384
effective search space used: 9360240546384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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